From a5590f3ce0ae21525a76ede21473a4a3970b3e64 Mon Sep 17 00:00:00 2001 From: John Marshall Date: Tue, 1 Oct 2024 21:45:45 +1300 Subject: [PATCH 1/2] Update GitHub Actions versions used --- .github/workflows/pr-comment.yaml | 2 +- .github/workflows/pr-pdfs.yaml | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/pr-comment.yaml b/.github/workflows/pr-comment.yaml index 9bae82f6e..36139c3a5 100644 --- a/.github/workflows/pr-comment.yaml +++ b/.github/workflows/pr-comment.yaml @@ -14,7 +14,7 @@ jobs: run_id: ${{ github.event.workflow_run.id }} steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - name: Download artifacts run: | diff --git a/.github/workflows/pr-pdfs.yaml b/.github/workflows/pr-pdfs.yaml index 616039556..7cc73b2a1 100644 --- a/.github/workflows/pr-pdfs.yaml +++ b/.github/workflows/pr-pdfs.yaml @@ -8,7 +8,7 @@ jobs: LaTeX: runs-on: ubuntu-latest steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 with: fetch-depth: 0 @@ -37,7 +37,7 @@ jobs: run1: make ${{ env.pdfs }} run2: -make -k OLD=$mergebase_sha NEW=HEAD ${{ env.diffs }} - - uses: actions/upload-artifact@v3 + - uses: actions/upload-artifact@v4 with: name: pdf retention-days: 1 From b3cb8a6ad26e4ff8a4a97867adc9e60f9889f927 Mon Sep 17 00:00:00 2001 From: John Marshall Date: Tue, 1 Oct 2024 21:46:43 +1300 Subject: [PATCH 2/2] Test para --- SAMv1.tex | 2 ++ 1 file changed, 2 insertions(+) diff --git a/SAMv1.tex b/SAMv1.tex index c1d76d1ae..45cf2a812 100644 --- a/SAMv1.tex +++ b/SAMv1.tex @@ -71,6 +71,8 @@ \section{The SAM Format Specification} BAM file may optionally specify the version being used via the {\tt @HD VN} tag. For full version history see Appendix~\ref{sec:history}. +The cat in the hat. + SAM file contents are 7-bit US-ASCII, except for certain field values as individually specified which may contain other Unicode characters encoded in UTF-8. Alternatively and equivalently, SAM files are encoded in UTF-8 but non-ASCII characters are permitted only within certain field values as explicitly specified in the descriptions of those fields.% \footnote{Hence in particular SAM files must not begin with a byte order mark~(BOM) and lines of text are delimited by ASCII line terminator characters only.