temp.py

import excel2sbol.converter_function as e2s
import os
import tyto
import sbol2

# print(tyto.endpoint.Ontobee.get_uri_by_term(getattr(tyto, "NCBITaxon"), 'Saccharomyces cerevisiae'))

doc = sbol2.Document()

# cwd = os.getcwd()
# template_name = "excel2bol_darpa_template_blank_v008_20211110.xlsx"
# file_path_in = os.path.join(cwd, 'excel2sbol', 'tests', 'test_files', 'pichia_comb_dev_compiler.xlsx')
# # file_path_in = os.path.join(cwd, 'flapjack_sbol_test.xlsx')
# # file_path_in = os.path.join(cwd, 'pichia_comb_dev_ProteinStructure.xlsx')
# file_path_out = os.path.join(cwd, 'out.xml')
# e2s.converter(file_path_in, file_path_out, template_name)


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