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DESCRIPTION
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Package: ribor
Title: An R Interface for Ribo Files
Version: 1.3.0
Authors@R: c(
person("Michael", "Geng", email = "[email protected]", role = c("cre", "aut")),
person("Hakan", "Ozadam", email = "[email protected]", role = "aut"),
person("Can", "Cenik", email = "[email protected]", role = "aut"))
Description: The ribor package provides an R Interface for .ribo files. It provides functionality to read the .ribo file, which is of HDF5 format, and performs common analyses on its contents.
License: GPL-3
Encoding: UTF-8
LazyData: false
Depends: R (>= 3.6.0)
biocViews:
Software,
Infrastructure
Imports:
dplyr,
ggplot2,
hash,
methods,
rhdf5,
rlang,
stats,
S4Vectors,
tidyr,
tools,
yaml
Suggests:
testthat,
knitr,
rmarkdown
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Collate:
'annotation_functions.R'
'check_functions.R'
'coverage_functions.R'
'ribo_class.R'
'ribo_methods.R'
'create_ribo.R'
'helper_functions.R'
'info_functions.R'
'metagene_functions.R'
'region_count_functions.R'
'ribor.R'
'rnaseq_functions.R'