DESCRIPTION

Package: censcyt
Version: 1.7.1
Title: Differential abundance analysis with a right censored covariate in high-dimensional cytometry
Description: Methods for differential abundance analysis in high-dimensional cytometry data when a covariate is subject to right censoring (e.g. survival time) based on multiple imputation and generalized linear mixed models.
Authors@R: person("Reto", "Gerber", email = "gerberreto@pm.me", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-5414-8906"))
URL: https://github.com/retogerber/censcyt
BugReports: https://github.com/retogerber/censcyt/issues
License: MIT + file LICENSE
biocViews:
    ImmunoOncology, 
    FlowCytometry, 
    Proteomics, 
    SingleCell, 
    CellBasedAssays, 
    CellBiology, 
    Clustering, 
    FeatureExtraction, 
    Software,
    Survival
Depends: 
    R (>= 4.0),
    diffcyt
Imports:
    BiocParallel,
    broom.mixed,
    dirmult,
    dplyr, 
    edgeR,
    fitdistrplus,
    lme4, 
    magrittr, 
    MASS,
    methods, 
    mice,
    multcomp, 
    purrr,
    rlang,
    S4Vectors,
    stats, 
    stringr,
    SummarizedExperiment, 
    survival,
    tibble,
    tidyr, 
    utils
VignetteBuilder: knitr
Suggests:
    BiocStyle,
    knitr,
    rmarkdown,
    testthat,
    ggplot2
RoxygenNote: 7.1.2