RDP traindata not found #5

gisleDK · 2015-08-12T09:02:12Z

Hi guys

make will fail because of missing data at rdp:

Download-traindata:
[get] Getting: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] To: /home/gisle/RDPTools/classifier/build/classes/data.tgz
[get] Error opening connection java.io.FileNotFoundException: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.FileNotFoundException: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.FileNotFoundException: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Can't get http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to /home/gisle/RDPTools/classifier/build/classes/data.tgz

BUILD FAILED
/home/gisle/RDPTools/classifier/build.xml:50: Can't get http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to /home/gisle/RDPTools/classifier/build/classes/data.tgz

Total time: 7 seconds
make: *** [classifier/dist/classifier.jar] Error 1

Hope to hear from you soon,

Gisle Vestergaard
Helmholtz Zentrum München

rdpstaffmsu · 2015-08-12T14:02:40Z

Hi, Gisele,

Sorry for the problem. We are working to get it fixed.

Benli Chai
RDP Staff

On Wed, Aug 12, 2015 at 5:02 AM, Gisle Vestergaard <[email protected]

wrote:

Hi guys

make will fail because of missing data at rdp:

Download-traindata:
[get] Getting:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] To: /home/gisle/RDPTools/classifier/build/classes/data.tgz
[get] Error opening connection java.io.FileNotFoundException:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.FileNotFoundException:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.FileNotFoundException:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Can't get
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to
/home/gisle/RDPTools/classifier/build/classes/data.tgz

BUILD FAILED
/home/gisle/RDPTools/classifier/build.xml:50: Can't get
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to
/home/gisle/RDPTools/classifier/build/classes/data.tgz

Total time: 7 seconds
make: *** [classifier/dist/classifier.jar] Error 1

Hope to hear from you soon,

Gisle Vestergaard
Helmholtz Zentrum München

—
Reply to this email directly or view it on GitHub
#5.

RDP Staff
Ribosomal Database Project
Center for Microbial Ecology
Michigan State University
567 Wilson Rd. Room 2225 A
East Lansing, MI 48824
(517) 353-3842

rdpstaffmsu · 2015-08-12T18:58:46Z

Hi, Gisele,

It's fixed. Let me how it works for you. Sorry for the inconvenience.

Benli

On Wed, Aug 12, 2015 at 10:02 AM, RDP Staff [email protected] wrote:

Hi, Gisele,

Sorry for the problem. We are working to get it fixed.

Benli Chai
RDP Staff

On Wed, Aug 12, 2015 at 5:02 AM, Gisle Vestergaard <
[email protected]> wrote:

Hi guys

make will fail because of missing data at rdp:

Download-traindata:
[get] Getting:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] To: /home/gisle/RDPTools/classifier/build/classes/data.tgz
[get] Error opening connection java.io.FileNotFoundException:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.FileNotFoundException:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.FileNotFoundException:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Can't get
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to
/home/gisle/RDPTools/classifier/build/classes/data.tgz

BUILD FAILED
/home/gisle/RDPTools/classifier/build.xml:50: Can't get
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to
/home/gisle/RDPTools/classifier/build/classes/data.tgz

Total time: 7 seconds
make: *** [classifier/dist/classifier.jar] Error 1

Hope to hear from you soon,

Gisle Vestergaard
Helmholtz Zentrum München

—
Reply to this email directly or view it on GitHub
#5.

RDP Staff
Ribosomal Database Project
Center for Microbial Ecology
Michigan State University
567 Wilson Rd. Room 2225 A
East Lansing, MI 48824
(517) 353-3842

RDP Staff
Ribosomal Database Project
Center for Microbial Ecology
Michigan State University
567 Wilson Rd. Room 2225 A
East Lansing, MI 48824
(517) 353-3842

gisleDK · 2015-08-13T07:45:14Z

BUILD SUCCESSFUL

Thanks for the fast response.

Gisle

walterxie · 2015-09-22T05:21:11Z

It happens again:

download-traindata:
[get] Getting: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] To: ~/WorkSpace/RDPTools/classifier/build/classes/data.tgz
[get] Error opening connection java.io.IOException: Server returned HTTP response code: 502 for URL: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.IOException: Server returned HTTP response code: 502 for URL: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.IOException: Server returned HTTP response code: 502 for URL: http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Can't get http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to ~/WorkSpace/RDPTools/classifier/build/classes/data.tgz

BUILD FAILED
~/WorkSpace/RDPTools/classifier/build.xml:50: Can't get http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to ~/WorkSpace/RDPTools/classifier/build/classes/data.tgz

Total time: 14 seconds
make: *** [classifier/dist/classifier.jar] Error 1

rdpstaffmsu · 2015-09-22T13:17:45Z

Hi, Gisele,

All the link work as I tested. Would you let me know the time of the day
the build process failed? Thank you.

Benli

On Tue, Sep 22, 2015 at 1:21 AM, Walter [email protected] wrote:

It happens again:

download-traindata:
[get] Getting:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] To: ~/WorkSpace/RDPTools/classifier/build/classes/data.tgz
[get] Error opening connection java.io.IOException: Server returned HTTP
response code: 502 for URL:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.IOException: Server returned HTTP
response code: 502 for URL:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Error opening connection java.io.IOException: Server returned HTTP
response code: 502 for URL:
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
[get] Can't get
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to
~/WorkSpace/RDPTools/classifier/build/classes/data.tgz

BUILD FAILED
~/WorkSpace/RDPTools/classifier/build.xml:50: Can't get
http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to
~/WorkSpace/RDPTools/classifier/build/classes/data.tgz

Total time: 14 seconds
make: *** [classifier/dist/classifier.jar] Error 1

—
Reply to this email directly or view it on GitHub
#5 (comment).

RDP Staff
Ribosomal Database Project
Center for Microbial Ecology
Michigan State University
567 Wilson Rd. Room 2225 A
East Lansing, MI 48824
(517) 353-3842

gisleDK · 2015-09-22T13:22:08Z

Hi Benli

My build was successful 13th of August (and I closed this thread...I thought). I do not know if walterxies problem is related.

Cheers,

Gisle

walterxie · 2015-09-22T22:03:50Z

Hi, Benli and Gisele,

Thank you both to follow up. The "build" is working now. And the link http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz is also working now, but which gave me "connection failure error" yesterday.

Cheers,
Walter

IdoBar · 2017-02-24T03:18:39Z

Hi Benli,

The link is "dead" again and the build fails (24/02/207, 1:20pm AET).

Thanks, Ido

gunturus · 2017-03-06T19:20:53Z

@IdoBar it should be working now

swtama21 · 2017-07-27T10:56:14Z

Hi everyone,
the command 'make' fails because of missing data at rdp now(27/07/2017)
I guess the link is unavailable (http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz)
How can I fix this??

gunturus · 2017-07-27T19:17:14Z

@swtama21 we had a ddos attack today. It should work now.

ycl6 · 2017-09-15T08:43:36Z

Hi, I tried to manually download data.tgz but transfer is stuck

$ wget -c -O data.tgz http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
--2017-09-15 16:37:54--  http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz
Resolving rdp.cme.msu.edu (rdp.cme.msu.edu)... 35.8.164.79
Connecting to rdp.cme.msu.edu (rdp.cme.msu.edu)|35.8.164.79|:80... connected.
HTTP request sent, awaiting response... 206 Partial Content
Length: 181332714 (173M), 181318922 (173M) remaining [application/x-gzip]
Saving to: ‘data.tgz’

data.tgz                                          0%[                                                                                                        ]  41.08K  --.-KB/s   eta 19d 12h

chaibenl · 2017-09-15T13:25:42Z

Would you like to try downloading with a web browser?

…

Sent from my iPhone

On Sep 15, 2017, at 4:43 AM, I-Hsuan Lin ***@***.***> wrote: Hi, I tried to manually download data.tgz but transfer is stuck $ wget -c -O data.tgz http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz --2017-09-15 16:37:54-- http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz Resolving rdp.cme.msu.edu (rdp.cme.msu.edu)... 35.8.164.79 Connecting to rdp.cme.msu.edu (rdp.cme.msu.edu)|35.8.164.79|:80... connected. HTTP request sent, awaiting response... 206 Partial Content Length: 181332714 (173M), 181318922 (173M) remaining [application/x-gzip] Saving to: ‘data.tgz’ data.tgz 0%[ ] 41.08K --.-KB/s eta 19d 12h — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.

ycl6 · 2017-09-15T13:33:11Z

@chaibenl I leave wget -c for a couple of hours then at the 7th retry the download suddenly is completed.

sbombin · 2018-04-20T15:51:03Z

Hello. I have the similar problem when I did it with "make" command:

BUILD FAILED
/Users/phycolab/Desktop/RDPTools/classifier/build.xml:51: Error while expanding /Users/phycolab/Desktop/RDPTools/classifier/build/classes/data.tgz
java.io.EOFException: Unexpected end of ZLIB input stream
at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:240)
at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:158)
at java.util.zip.GZIPInputStream.read(GZIPInputStream.java:117)
at org.apache.tools.tar.TarBuffer.readBlock(TarBuffer.java:253)
at org.apache.tools.tar.TarBuffer.readRecord(TarBuffer.java:220)
at org.apache.tools.tar.TarInputStream.read(TarInputStream.java:603)
at java.io.FilterInputStream.read(FilterInputStream.java:107)
at org.apache.tools.ant.taskdefs.Expand.extractFile(Expand.java:357)
at org.apache.tools.ant.taskdefs.Untar.expandStream(Untar.java:154)
at org.apache.tools.ant.taskdefs.Untar.expandFile(Untar.java:108)
at org.apache.tools.ant.taskdefs.Expand.execute(Expand.java:157)
at org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:292)
at sun.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.tools.ant.dispatch.DispatchUtils.execute(DispatchUtils.java:106)
at org.apache.tools.ant.Task.perform(Task.java:350)
at org.apache.tools.ant.Target.execute(Target.java:448)
at org.apache.tools.ant.Target.performTasks(Target.java:469)
at org.apache.tools.ant.Project.executeSortedTargets(Project.java:1399)
at org.apache.tools.ant.Project.executeTarget(Project.java:1370)
at org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.java:41)
at org.apache.tools.ant.Project.executeTargets(Project.java:1260)
at org.apache.tools.ant.Main.runBuild(Main.java:849)
at org.apache.tools.ant.Main.startAnt(Main.java:228)
at org.apache.tools.ant.launch.Launcher.run(Launcher.java:283)
at org.apache.tools.ant.launch.Launcher.main(Launcher.java:101)

Total time: 4 minutes 49 seconds
make: *** [classifier/dist/classifier.jar] Error 1

abenaa07 · 2018-04-27T17:59:13Z

Hello,

I'm getting the same error message:

BUILD FAILED
/RDPTools/classifier/build.xml:50: Can't get http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz to /RDPTools/classifier/build/classes/data.tgz

Total time: 2 seconds
Makefile:24: recipe for target 'classifier/dist/classifier.jar' failed
make: *** [classifier/dist/classifier.jar] Error 1

komorihi · 2018-05-02T02:32:57Z

I'm on the same error.
And when accessing http://rdp.cme.msu.edu/download/rdpclassifiertraindata/data.tgz from web browser, I got an error "RDP :: Page Not Found".

dacb · 2018-05-03T19:52:20Z

@rdpstaffmsu
I am also having this problem.

gunturus · 2018-05-04T14:15:28Z

Thank you for noticing the problem. We have two servers running RDP. One of the servers didn't have the file. We now have the servers mirrored and you will be download the file.

thank you for noticing the problem

ppericard · 2019-07-22T20:57:12Z

Hi,

I've been having the same pb for a few hours. Do you have an idea when the server will be up again?

Maybe having the training data also stored in a completely different server, by another organization, could help when your server is down. But you would also need a way to set the compiler to get the data on this other server.

Thanks in advance.

Cheers,
Pierre

gunturus · 2019-07-22T21:22:03Z

HI Pierre,

I have restarted the website. We have been getting unpredictable tomcat server crashes. Can you try it now.

Santosh

ppericard · 2019-07-22T21:28:09Z

Yep. It works now!
Thank you ^^

stav3eyal · 2022-02-16T12:54:21Z

Hi, I'm having the same problem.

kumarpatel · 2024-01-12T19:19:07Z

same problem. Running make command on 7:18 p.m. Friday, January 12, 2024

Can the data.tgz made available?

cebercoto · 2024-05-14T07:20:06Z

Same problem here as of 14/05/2024

Elm-trees · 2025-01-08T00:15:33Z

I am also having this problem - I've tried to run it numerous times on 1/6/2025 and 1/7/2025. Most recent attempt was at 7:15 PM, but I made several attempts this morning and yesterday afternoon/evening as well.

gisleDK closed this as completed Aug 13, 2015

gunturus reopened this May 4, 2018

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RDP traindata not found #5

RDP traindata not found #5

gisleDK commented Aug 12, 2015

rdpstaffmsu commented Aug 12, 2015

rdpstaffmsu commented Aug 12, 2015

gisleDK commented Aug 13, 2015

walterxie commented Sep 22, 2015

rdpstaffmsu commented Sep 22, 2015

gisleDK commented Sep 22, 2015

walterxie commented Sep 22, 2015

IdoBar commented Feb 24, 2017

gunturus commented Mar 6, 2017

swtama21 commented Jul 27, 2017

gunturus commented Jul 27, 2017

ycl6 commented Sep 15, 2017

chaibenl commented Sep 15, 2017 via email

ycl6 commented Sep 15, 2017

sbombin commented Apr 20, 2018

abenaa07 commented Apr 27, 2018

komorihi commented May 2, 2018

dacb commented May 3, 2018

gunturus commented May 4, 2018

ppericard commented Jul 22, 2019 •

edited

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gunturus commented Jul 22, 2019

ppericard commented Jul 22, 2019

stav3eyal commented Feb 16, 2022

kumarpatel commented Jan 12, 2024

cebercoto commented May 14, 2024

Elm-trees commented Jan 8, 2025

RDP traindata not found #5

RDP traindata not found #5

Comments

gisleDK commented Aug 12, 2015

rdpstaffmsu commented Aug 12, 2015

rdpstaffmsu commented Aug 12, 2015

gisleDK commented Aug 13, 2015

walterxie commented Sep 22, 2015

rdpstaffmsu commented Sep 22, 2015

gisleDK commented Sep 22, 2015

walterxie commented Sep 22, 2015

IdoBar commented Feb 24, 2017

gunturus commented Mar 6, 2017

swtama21 commented Jul 27, 2017

gunturus commented Jul 27, 2017

ycl6 commented Sep 15, 2017

chaibenl commented Sep 15, 2017 via email

ycl6 commented Sep 15, 2017

sbombin commented Apr 20, 2018

abenaa07 commented Apr 27, 2018

komorihi commented May 2, 2018

dacb commented May 3, 2018

gunturus commented May 4, 2018

ppericard commented Jul 22, 2019 • edited Loading

gunturus commented Jul 22, 2019

ppericard commented Jul 22, 2019

stav3eyal commented Feb 16, 2022

kumarpatel commented Jan 12, 2024

cebercoto commented May 14, 2024

Elm-trees commented Jan 8, 2025

ppericard commented Jul 22, 2019 •

edited

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