tests.yml

# This workflow will run unit tests when main is updated, on pull requests or when manually activated

name: pytest

on:
  push:
    branches:
      main
  pull_request:
  workflow_dispatch:

jobs:
  test:
    strategy:
      matrix:
        os: [ubuntu-latest, windows-latest, macos-latest]
    runs-on: ${{ matrix.os }}
    steps:
      - name: Check out repository
        uses: actions/checkout@v4

      - name: Set up python
        id: setup-python
        uses: actions/setup-python@v5
        with:
          python-version: "3.10"

      - name: Install
        run: pip install .[test]

      - name: Run tests
        run: |
          coverage run -m pytest --junitxml=reports/junit/junit.xml --html=reports/junit/report.html


      ## everything from here deals with generating and uploading reports and badges to a separate "badges" repo.
      - name: Create reports and badges
        if: github.ref_name == 'main' && matrix.os == 'ubuntu-latest'
        run: |
          coverage xml -o reports/coverage/coverage.xml
          coverage html -d reports/coverage/
          genbadge coverage -i reports/coverage/coverage.xml
          genbadge tests -i reports/junit/junit.xml


      - name: Make badge dir
        if: github.ref_name == 'main' && matrix.os == 'ubuntu-latest'
        run: |
          mkdir -p badges
          mv *badge.svg badges

      - name: Setup assets dir
        if: github.ref_name == 'main' && matrix.os == 'ubuntu-latest'
        run: |
          mkdir assets
          mv badges assets/
          mv reports assets/

      - name: Clone badges repo
        if: github.ref_name == 'main' && matrix.os == 'ubuntu-latest'
        run: |
            git clone --branch=gh-pages https://${{ secrets.BADGES_ACCESS_TOKEN }}@github.com/qupath/badges.git badges
            ## cba handling merging or dealing with stale resources
            rm -rf badges/${{ github.event.repository.name }}
            mkdir -p badges/${{ github.event.repository.name }}
            mv assets/* badges/${{github.event.repository.name}}/

      - name: Deploy badges to gh-pages
        if: github.ref_name == 'main' && matrix.os == 'ubuntu-latest'
        run: |
          cd badges
          git config user.name "github-actions[bot]"
          git config user.email "github-actions[bot]@users.noreply.github.com"
          git add .
          git commit -m "Update badges and reports"
          git push