Dockerfile

FROM python:3.5.1
ENV PYTHONUNBUFFERED 1
RUN apt-get update && apt-get install -y \
    libopenblas-dev \
    gfortran \
    pkg-config \
    libxml2-dev \
    libxmlsec1-dev \
    libhdf5-dev \
    libgeos-dev \
    build-essential \
    openssl \
    wget \
    vim

RUN pip install cython
RUN pip install numpy
RUN pip install scikit-learn pandas h5py matplotlib
RUN pip install uwsgi
RUN pip install Django==1.11.2
RUN pip install social-auth-app-django
RUN pip install social-auth-core[saml]
RUN pip install djangorestframework
RUN pip install django-rest-swagger
RUN pip install django-filter
RUN pip install django-taggit
RUN pip install django-form-utils
RUN pip install django-crispy-forms
RUN pip install django-taggit-templatetags
RUN pip install django-dirtyfields
RUN pip install 'dropbox==1.6'
RUN pip install 'django-dbbackup<2.3'
RUN pip install psycopg2
RUN pip install numexpr
RUN pip install shapely
RUN pip install Pillow
RUN pip install requests
RUN pip install requests-oauthlib
RUN pip install python-openid
RUN pip install django-sendfile
RUN pip install django-polymorphic
RUN pip install celery[redis]==3.1.25
RUN pip install django-celery
RUN pip install scikit-learn
RUN pip install django-cleanup
RUN pip install django-chosen
RUN pip install opbeat
RUN pip install 'django-hstore==1.3.5'
RUN pip install django-datatables-view
RUN pip install django-oauth-toolkit
RUN pip install simplejson
RUN pip install django-gravatar2
RUN pip install pygments
RUN pip install django-lockdown
RUN pip install xmltodict
RUN pip install grpcio
RUN pip install som
RUN pip install django-cors-headers
RUN pip install django-user-agents
RUN pip install django-guardian
RUN pip install pyinotify
RUN pip install haikunator

# Install pydicom
WORKDIR /tmp
RUN git clone https://github.com/pydicom/pydicom
WORKDIR pydicom
RUN python setup.py install

RUN mkdir /code
RUN mkdir -p /var/www/images
RUN mkdir /data
WORKDIR /code
RUN /usr/bin/yes | pip uninstall cython
RUN apt-get remove -y gfortran

RUN apt-get autoremove -y
RUN apt-get clean
RUN rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

ADD . /code/
CMD /code/run_uwsgi.sh

EXPOSE 3031