New defaults for concat
, merge
, combine_*
#16425
Annotations
10 errors and 12 warnings
Run tests:
xarray/tests/test_concat.py#L135
test_concat_compat
FutureWarning: In a future version of xarray the default value for join will change from join='outer' to join='exact'. This change will result in the following ValueError:cannot be aligned with join='exact' because index/labels/sizes are not equal along these coordinates (dimensions): 'y' ('y',) The recommendation is to set join explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L228
test_concat_second_empty
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError: Cannot specify both data_vars='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L268
test_concat_multiple_datasets_missing_vars[False]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasets have matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L493
TestConcatDataset.test_concat_simple[dim1-True-different]
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError: Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L493
TestConcatDataset.test_concat_simple[dim2-False-different]
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError: Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
xarray/tests/test_concat.py#L514
TestConcatDataset.test_concat_merge_variables_present_in_some_datasets
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasets have matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim1-different]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasets have matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim1-minimal]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasets have matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim1-all]
FutureWarning: In a future version of xarray the default value for data_vars will change from data_vars='all' to data_vars='minimal'. This is likely to lead to different results when multiple datasets have matching variables with overlapping values. To opt in to new defaults and get rid of these warnings now use `set_options(use_new_combine_kwarg_defaults=True) or set data_vars explicitly.
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Run tests:
xarray/tests/test_concat.py#L538
TestConcatDataset.test_concat_coords_kwarg[dim2-different]
FutureWarning: In a future version of xarray the default value for compat will change from compat='equals' to compat='override'. This change will result in the following ValueError: Cannot specify both coords='different' and compat='override'. The recommendation is to set compat explicitly for this case.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f4ffc8e5300>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='59371486-3494-4a97-a19e-cb00ca42ac68'), but file is not already closed. This may indicate a bug.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f4ffc89a320>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='a3d90233-797e-4d23-abd6-dd72ec8b3163'), but file is not already closed. This may indicate a bug.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f4ffc8e5300>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='59371486-3494-4a97-a19e-cb00ca42ac68'), but file is not already closed. This may indicate a bug.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f4ffc89a320>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None, 'phony_dims': 'access'}, manager_id='a3d90233-797e-4d23-abd6-dd72ec8b3163'), but file is not already closed. This may indicate a bug.
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Run tests:
xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/array_api_strict/_data_type_functions.py#L45
invalid value encountered in cast
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Run tests:
xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/array_api_strict/_data_type_functions.py#L45
invalid value encountered in cast
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
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Run tests:
home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
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Restore cached hypothesis directory
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release.
A separate `actions/cache/restore` step should be used instead.
See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
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Setup micromamba
Cache not found for keys: Linux-X64-py3.13-2025-02-26-c221d1a8acfc2436e37af6dc4a51ce46b7cd0d49c3905abb2b157ec14f7b956b-linux-64-xarray-tests-args-a3edb49-root-dcc80ee-bin-[object Promise]-file-ae1c30cc20ee9016e1f67897a09749a8e5b907d49d448d422645b591dc225b63
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