From f2b1bfc43310fa8abd5e30a27d92e9a18cf8ac27 Mon Sep 17 00:00:00 2001 From: Michael Baudis Date: Mon, 4 Nov 2024 07:49:19 +0900 Subject: [PATCH] Update changelog.md --- docs/changelog.md | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/docs/changelog.md b/docs/changelog.md index d6104f2b..0625d9f8 100644 --- a/docs/changelog.md +++ b/docs/changelog.md @@ -4,6 +4,16 @@ This page lists changes for the [Beacon+](http://beacon.progenetix.org/ui/) implementation of the ["Beacon" genomics API](http://beacon-project.io), as well as related updates for the [Progenetix](http://progenetix.org) front-end. +## 2024-11-02: Fix for missing TCGA analyses + +During import of the TCGA non-CNV variants the "analysis" objects somehow got +lost although variants were imported correctly, leading to a missing association of +those variants w/ their samples during query result aggregation. Fixed for all +10007 samples by extracting the previously assigned `analysis_id` values together +with the `biosample_id` values from the variants and generating the missing analysis +objects. Now TCGA has working calls for "double hit" CNV + SNV events. + + ## 2024-09-10: Ongoing removal of samples from pure germline series So far of the currently 145264 samples the Progenetix collection consisted of