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exlucde region in ’clump‘ #48

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LiuYunjia opened this issue Dec 14, 2021 · 0 comments
Open

exlucde region in ’clump‘ #48

LiuYunjia opened this issue Dec 14, 2021 · 0 comments

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@LiuYunjia
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Hi, thank you for this powerful tool !
I am curious about the reason why the region '8:7200000-12500000' would also be excluded.
Are there some publications describing this thing?

python sumstats.py clump
--clump-field FDR
--force
--plink /home/oleksandr/plink/plink
--sumstats cond0p01_BIP_vs_COG/result.mat.csv
--bfile-chr /full/path/to/ref_1kG_phase3_EUR/chr@
--exclude-ranges ['6:25119106-33854733', '8:7200000-12500000'] \

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