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Kim Rutherford edited this page Jul 20, 2015 · 16 revisions

PomBase Chado notes

Alleles

Alleles are stored as features with SO type allele.

Allele feature have these possible featureprops:

allele_type
canto_session
description

Genotype modelling

Genotypes are stored as features with SO type genotype. allele features are part_of genotype feature via the feature_relationship table.