diff --git a/ChangeLog b/ChangeLog index b78e613..478678f 100644 --- a/ChangeLog +++ b/ChangeLog @@ -1,6 +1,19 @@ CHANGES ======= +1.4.0 +----- + +* perf: switch source and target for dijkstra + +1.3.3 +----- + +* refactor: make type of 0L clear to std::max on Windows +* Revert "fix: don't assume vertices are uint32" +* fix: don't assume vertices are uint32 +* chore: update ChangeLog + 1.3.2 ----- diff --git a/README.md b/README.md index ef13e93..2ad443f 100644 --- a/README.md +++ b/README.md @@ -30,7 +30,7 @@ In the future, we may create a fully binary distribution. Fig. 2: Memory Usage on a 512x512x512 Densely Labeled Volume

-Figure 2 shows the memory usage and processessing time (~390 seconds, about 6.5 minutes) required when Kimimaro 0.5.2 was applied to a 512x512x512 cutout, *labels*, from a connectomics dataset containing 2124 connected components. The different sections of the algorithm are depicted. Grossly, the preamble runs for about half a minute, skeletonization for about six minutes, and finalization within seconds. The peak memory usage was about 4.1 GB. The code below was used to process *labels*. The processing of the glia was truncated in due to a combination of *fix_borders* and max_paths. +Figure 2 shows the memory usage and processessing time (~390 seconds, about 6.5 minutes) required when Kimimaro 1.4.0 was applied to a 512x512x512 cutout, *labels*, from a connectomics dataset containing 2124 connected components. The different sections of the algorithm are depicted. Grossly, the preamble runs for about half a minute, skeletonization for about six minutes, and finalization within seconds. The peak memory usage was about 4.5 GB. The code below was used to process *labels*. The processing of the glia was truncated in due to a combination of *fix_borders* and max_paths. Kimimaro has come a long way. Version 0.2.1 took over 15 minutes and had a Preamble run time twice as long on the same dataset. diff --git a/kimimaro_512x512x512_benchmark.png b/kimimaro_512x512x512_benchmark.png index 8814b06..54bcc80 100644 Binary files a/kimimaro_512x512x512_benchmark.png and b/kimimaro_512x512x512_benchmark.png differ