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Subject-specific brain functional fingerprints are preserved during general anesthesia

Overview

Motivated by clinical needs, we conducted a comprehensive study to explore the effects of anesthesia on cortical functional connectivity at an individual level. Our study involved individualized functional analyses of resting-state fMRI data from 14 healthy participants, encompassing both awake and anesthetized states. Importantly, each participant underwent extensive 96-minute fMRI scanning, enabling us to capture robust anesthesia-induced changes at the individual level.

We observed reduced connectivity during anesthesia compared to the awake state, particularly within unimodal networks and across various between-network interactions, indicating a weakened functional integration. Although anesthesia diminished individual differences in functional connectivity, we found that subject-specific functional connectivity fingerprints were well-preserved. To mitigate the effects of anesthesia on brain connectivity, we developed a predictive model that accurately reconstructs functional connectomes in the awake state using data collected under anesthesia. We demonstrated the model's ability to identify disease-specific dysfunctions using data from 29 anesthetized children with autism spectrum disorder (ASD).

System Requirements

The package is supported for Linux and macOS. The package has been tested on Linux operating systems.

  • Linux : Ubuntu (20.04.5)
  • macOS

Some softwares should be installed and setted up.

BrainSector® Cloud:preprocess, you can also use other pipelines to deal with the rsfMRI data

FreeSurfer: v6.0.0, for registration

FSL: v6.0 for registration

Connectome Workbench: v1.5.0, for visualization

Matlab: 2020a, for statistical analysis

Code

This repository contains a general pipeline for analysis of the publication

Dissimilarity analysis: For each vertex on the cortical surface, we compared its connectivity profiles between awake and anesthetized states while controlling for normal variations.

Variability analysis: To understand how anesthesia affects individual differences in brain functional activity, we utilized a previously reported method to derive a map of inter-individual variability in RSFC while controlling for intra-individual variability.

HBM model: Anesthetic effects on functional connectivity could obscure the effect of diseases. To address this, we developed a predictive model to estimate the individual functional connectome in the awake state using data collected during the anesthetized state. The model incorporates a nonlinear fitting model and a Hierarchical Bayesian Model (HBM), leveraging prior knowledge about the anesthetic effect on functional networks and inter-individual variability, respectively.

Data

Results: you can find the data and results used in this research, including Similarity,Dissimilarity,all FC matrix and Abnormality.

License

This project is covered under the Apache 2.0 License.