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Compare info on neurotransmitters #274

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pgleeson opened this issue Mar 14, 2016 · 2 comments
Open

Compare info on neurotransmitters #274

pgleeson opened this issue Mar 14, 2016 · 2 comments
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@pgleeson
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pgleeson commented Mar 14, 2016

There is information on the neurotransmitters in each C elegans neuron here:

A cellular and regulatory map of the cholinergic nervous system of C. elegans

This should be compared with the data on neurotransmitters in the latest connectome data files, and our info updated as appropriate.

Parent to #283, #284

@slarson
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slarson commented Mar 14, 2016

Great catch. John White also just pointed us at this paper.

Direct links:

Table from the reference
Dynamic spreadsheet containing OpenWorm neurotransmitter info

See more on the process of how spreadsheets get turned into database info here

cc: @ahrasheed @aribrich

@clbarnes
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clbarnes commented Jan 10, 2017

There is also new expression data in this paper: http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005283

The machine-readable versions are in the S1 Dataset.

@mwatts15 mwatts15 changed the title Compare info on neurotransmitters Compare info on neurotransmitters Jan 30, 2017
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