diff --git a/schemas/actors/accountInformation.schema.tpl.json b/schemas/actors/accountInformation.schema.tpl.json index 2c298754..497f9c5a 100644 --- a/schemas/actors/accountInformation.schema.tpl.json +++ b/schemas/actors/accountInformation.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/AccountInformation", + "_type": "core:AccountInformation", "required": [ "service", "userName" @@ -8,7 +8,7 @@ "service": { "_instruction": "Add the web service of this account.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/WebService" + "core:WebService" ] }, "userName": { diff --git a/schemas/actors/affiliation.schema.tpl.json b/schemas/actors/affiliation.schema.tpl.json index e8227e4c..ffb00ddc 100644 --- a/schemas/actors/affiliation.schema.tpl.json +++ b/schemas/actors/affiliation.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Affiliation", + "_type": "core:Affiliation", "required": [ "memberOf" ], @@ -14,8 +14,8 @@ "memberOf": { "_instruction": "Add the organization or consortium another party was or still is a member of.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Consortium", - "https://openminds.ebrains.eu/core/Organization" + "core:Consortium", + "core:Organization" ] }, "startDate": { diff --git a/schemas/actors/consortium.schema.tpl.json b/schemas/actors/consortium.schema.tpl.json index 30ee7c59..fb465480 100644 --- a/schemas/actors/consortium.schema.tpl.json +++ b/schemas/actors/consortium.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Consortium", + "_type": "core:Consortium", "_categories": [ "legalPerson" ], @@ -10,7 +10,7 @@ "contactInformation": { "_instruction": "Add the contact information of this consortium.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContactInformation" + "core:ContactInformation" ] }, "fullName": { diff --git a/schemas/actors/contactInformation.schema.tpl.json b/schemas/actors/contactInformation.schema.tpl.json index eee17d4e..d569468c 100644 --- a/schemas/actors/contactInformation.schema.tpl.json +++ b/schemas/actors/contactInformation.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ContactInformation", + "_type": "core:ContactInformation", "required": [ "email" ], diff --git a/schemas/actors/contribution.schema.tpl.json b/schemas/actors/contribution.schema.tpl.json index a4a43546..90722fde 100644 --- a/schemas/actors/contribution.schema.tpl.json +++ b/schemas/actors/contribution.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Contribution", + "_type": "core:Contribution", "required": [ "contributor", "type" @@ -17,7 +17,7 @@ "uniqueItems": true, "_instruction": "Add the party that performed the contribution.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ContributionType" + "controlledTerms:ContributionType" ] } } diff --git a/schemas/actors/organization.schema.tpl.json b/schemas/actors/organization.schema.tpl.json index 0ff1a6f2..583d5bbd 100644 --- a/schemas/actors/organization.schema.tpl.json +++ b/schemas/actors/organization.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Organization", + "_type": "core:Organization", "_categories": [ "legalPerson" ], @@ -13,7 +13,7 @@ "uniqueItems": true, "_instruction": "Enter all current and, if necessary, past affiliations of this organization.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Affiliation" + "core:Affiliation" ] }, "digitalIdentifier": { @@ -22,9 +22,9 @@ "uniqueItems": true, "_instruction": "Add all globally unique and persistent digital identifier of this organization.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/GRIDID", - "https://openminds.ebrains.eu/core/RORID", - "https://openminds.ebrains.eu/core/RRID" + "core:GRIDID", + "core:RORID", + "core:RRID" ] }, "fullName": { @@ -37,7 +37,7 @@ "uniqueItems": true, "_instruction": "Add all parent organizations of this organization.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Organization" + "core:Organization" ] }, "homepage": { diff --git a/schemas/actors/person.schema.tpl.json b/schemas/actors/person.schema.tpl.json index f1ce1c1e..bd503e0a 100644 --- a/schemas/actors/person.schema.tpl.json +++ b/schemas/actors/person.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Person", + "_type": "core:Person", "_categories": [ "agent", "legalPerson" @@ -14,7 +14,7 @@ "uniqueItems": true, "_instruction": "Enter all current and, if desired, past affiliations of this person.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Affiliation" + "core:Affiliation" ] }, "alternateName": { @@ -32,13 +32,13 @@ "uniqueItems": true, "_instruction": "Add the information about web service accounts held by this person.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/AccountInformation" + "core:AccountInformation" ] }, "contactInformation": { "_instruction": "Add the contact information of this person.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContactInformation" + "core:ContactInformation" ] }, "digitalIdentifier": { @@ -47,7 +47,7 @@ "uniqueItems": true, "_instruction": "Add all globally unique and persistent digital identifier of this person.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ORCID" + "core:ORCID" ] }, "familyName": { diff --git a/schemas/data/contentType.schema.tpl.json b/schemas/data/contentType.schema.tpl.json index 7fc60187..57a33f3f 100644 --- a/schemas/data/contentType.schema.tpl.json +++ b/schemas/data/contentType.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ContentType", + "_type": "core:ContentType", "required": [ "name" ], @@ -10,7 +10,7 @@ "uniqueItems": true, "_instruction": "Add all data types that may be represented via this content type.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/DataType" + "controlledTerms:DataType" ] }, "description": { diff --git a/schemas/data/contentTypePattern.schema.tpl.json b/schemas/data/contentTypePattern.schema.tpl.json index ae58fb49..e1ab3d56 100644 --- a/schemas/data/contentTypePattern.schema.tpl.json +++ b/schemas/data/contentTypePattern.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ContentTypePattern", + "_type": "core:ContentTypePattern", "required": [ "contentType", "regex" @@ -8,7 +8,7 @@ "contentType": { "_instruction": "Add the content type that can be defined by the regular expression of this content type pattern (e.g., for file extensions).", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "lookupLabel": { diff --git a/schemas/data/copyright.schema.tpl.json b/schemas/data/copyright.schema.tpl.json index 0a476575..63e50601 100644 --- a/schemas/data/copyright.schema.tpl.json +++ b/schemas/data/copyright.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Copyright", + "_type": "core:Copyright", "required": [ "holder", "year" diff --git a/schemas/data/file.schema.tpl.json b/schemas/data/file.schema.tpl.json index 1471dfb5..64320154 100644 --- a/schemas/data/file.schema.tpl.json +++ b/schemas/data/file.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/File", + "_type": "core:File", "_categories": [ "fileOrigin" ], @@ -18,19 +18,19 @@ "uniqueItems": true, "_instruction": "Add all data types that are specifically represented in this file instance.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/DataType" + "controlledTerms:DataType" ] }, "fileRepository": { "_instruction": "Add the overarching repository to which this file instance belongs.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/FileRepository" + "core:FileRepository" ] }, "format": { "_instruction": "Add the content type of this file instance.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "hash": { @@ -39,7 +39,7 @@ "uniqueItems": true, "_instruction": "Add all hashes that were generated for this file instance.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Hash" + "core:Hash" ] }, "IRI": { @@ -55,7 +55,7 @@ "uniqueItems": true, "_instruction": "Add all file bundles in which this file instance is grouped into.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/FileBundle" + "core:FileBundle" ] }, "name": { @@ -65,13 +65,13 @@ "specialUsageRole": { "_instruction": "Add the special usage role of this file instance.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/FileUsageRole" + "controlledTerms:FileUsageRole" ] }, "storageSize": { "_instruction": "Enter the storage size of this file instance.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue" + "core:QuantitativeValue" ] } } diff --git a/schemas/data/fileArchive.schema.tpl.json b/schemas/data/fileArchive.schema.tpl.json index 3b63d376..81c3e0e3 100644 --- a/schemas/data/fileArchive.schema.tpl.json +++ b/schemas/data/fileArchive.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/FileArchive", + "_type": "core:FileArchive", "required": [ "format", "IRI" @@ -8,7 +8,7 @@ "format": { "_instruction": "Add the content type of this file archive.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "IRI": { @@ -24,7 +24,7 @@ "uniqueItems": true, "_instruction": "Add the data that were ingested and modified to create this file archive.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File" + "core:File" ] } } diff --git a/schemas/data/fileBundle.schema.tpl.json b/schemas/data/fileBundle.schema.tpl.json index 5e2a7962..858b4cc5 100644 --- a/schemas/data/fileBundle.schema.tpl.json +++ b/schemas/data/fileBundle.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/FileBundle", + "_type": "core:FileBundle", "_categories": [ "fileOrigin" ], @@ -15,7 +15,7 @@ "format": { "_instruction": "If the files within this bundle are organised and formatted according to a formal data structure, add the content type of this file bundle. Leave blank if no formal data structure has been applied to the files within this bundle.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "groupedBy": { @@ -35,20 +35,20 @@ "uniqueItems": true, "_instruction": "Add all grouping types that were used to define this file bundle. Note that the grouping types define the possible schema type of the instances stated under 'groupedBy'.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/FileBundleGrouping" + "controlledTerms:FileBundleGrouping" ] }, "hash": { "_instruction": "Add the hash that was generated for this file bundle.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Hash" + "core:Hash" ] }, "isPartOf": { "_instruction": "Add the file bundle or file repository this file bundle is part of.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/FileRepository" + "core:FileBundle", + "core:FileRepository" ] }, "name": { @@ -58,7 +58,7 @@ "storageSize": { "_instruction": "Enter the storage size of this file bundle.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue" + "core:QuantitativeValue" ] } } diff --git a/schemas/data/filePathPattern.schema.tpl.json b/schemas/data/filePathPattern.schema.tpl.json index af924dbc..ead1f703 100644 --- a/schemas/data/filePathPattern.schema.tpl.json +++ b/schemas/data/filePathPattern.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/FilePathPattern", + "_type": "core:FilePathPattern", "required": [ "groupingType", "regex" @@ -11,7 +11,7 @@ "uniqueItems": true, "_instruction": "Add all grouping types that are defined by this file path pattern.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/FileBundleGrouping" + "controlledTerms:FileBundleGrouping" ] }, "regex": { diff --git a/schemas/data/fileRepository.schema.tpl.json b/schemas/data/fileRepository.schema.tpl.json index b1fd99ac..1dd44bd8 100644 --- a/schemas/data/fileRepository.schema.tpl.json +++ b/schemas/data/fileRepository.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/FileRepository", + "_type": "core:FileRepository", "required": [ "hostedBy", "IRI", @@ -9,19 +9,19 @@ "format": { "_instruction": "If the files and file bundles within this repository are organised and formatted according to a formal data structure, add the content type of this formal data structure. Leave blank if no formal data structure has been applied.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "hash": { "_instruction": "Add the hash that was generated for this file repository.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Hash" + "core:Hash" ] }, "hostedBy": { "_instruction": "Add the host organization of this file repository.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Organization" + "core:Organization" ] }, "IRI": { @@ -41,25 +41,25 @@ "uniqueItems": true, "_instruction": "Add all content type patterns that identify matching content types for files within this file repository.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentTypePattern" + "core:ContentTypePattern" ] }, "storageSize": { "_instruction": "Enter the storage size of this file repository.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue" + "core:QuantitativeValue" ] }, "structurePattern": { "_instruction": "Add the file repository structure that identifies the file path patterns used in this file repository.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/FileRepositoryStructure" + "core:FileRepositoryStructure" ] }, "type": { "_instruction": "Add the type of this file repository.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/FileRepositoryType" + "controlledTerms:FileRepositoryType" ] } } diff --git a/schemas/data/fileRepositoryStructure.schema.tpl.json b/schemas/data/fileRepositoryStructure.schema.tpl.json index f65e10e6..fa6cb1a2 100644 --- a/schemas/data/fileRepositoryStructure.schema.tpl.json +++ b/schemas/data/fileRepositoryStructure.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/FileRepositoryStructure", + "_type": "core:FileRepositoryStructure", "required": [ "filePathPattern" ], @@ -10,7 +10,7 @@ "uniqueItems": true, "_instruction": "Add all file path patterns that define this file repository structure.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/FilePathPattern" + "core:FilePathPattern" ] }, "lookupLabel": { diff --git a/schemas/data/hash.schema.tpl.json b/schemas/data/hash.schema.tpl.json index d863f96a..45d2184c 100644 --- a/schemas/data/hash.schema.tpl.json +++ b/schemas/data/hash.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Hash", + "_type": "core:Hash", "required": [ "algorithm", "digest" diff --git a/schemas/data/license.schema.tpl.json b/schemas/data/license.schema.tpl.json index 26d39001..d42565b1 100644 --- a/schemas/data/license.schema.tpl.json +++ b/schemas/data/license.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/License", + "_type": "core:License", "required": [ "fullName", "legalCode", diff --git a/schemas/data/measurement.schema.tpl.json b/schemas/data/measurement.schema.tpl.json index 18336723..976daf81 100644 --- a/schemas/data/measurement.schema.tpl.json +++ b/schemas/data/measurement.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Measurement", + "_type": "core:Measurement", "required": [ "measuredQuantity", "value" @@ -12,7 +12,7 @@ "measuredQuantity": { "_instruction": "Add the quantity that was measured during this measurement.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/MeasuredQuantity" + "controlledTerms:MeasuredQuantity" ] }, "measuredWith": { @@ -34,8 +34,8 @@ "uniqueItems": true, "_instruction": "Enter all values that were measured at the same time and are of the same measured quantity.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue", - "https://openminds.ebrains.eu/core/QuantitativeValueRange" + "core:QuantitativeValue", + "core:QuantitativeValueRange" ] } } diff --git a/schemas/data/serviceLink.schema.tpl.json b/schemas/data/serviceLink.schema.tpl.json index 7a929319..fd9affa0 100644 --- a/schemas/data/serviceLink.schema.tpl.json +++ b/schemas/data/serviceLink.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ServiceLink", + "_type": "core:ServiceLink", "required": [ "dataLocation", "openDataIn", @@ -9,11 +9,11 @@ "dataLocation": { "_instruction": "Add the location of the data that are linked to this specific service (e.g., stored as file (bundles) or registered as other entities such as atlas annotations).", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileArchive", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/ModelVersion", - "https://openminds.ebrains.eu/publications/LivePaperResourceItem", + "core:File", + "core:FileArchive", + "core:FileBundle", + "core:ModelVersion", + "publications:LivePaperResourceItem", "https://openminds.ebrains.eu/sands/ParcellationEntityVersion" ] }, @@ -31,13 +31,13 @@ "previewImage": { "_instruction": "Add an image file to this service link that acts as a preview of its content or could function as an icon.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File" + "core:File" ] }, "service": { "_instruction": "Add the service in which the specified data can be opened.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Service" + "controlledTerms:Service" ] } } diff --git a/schemas/digitalIdentifier/DOI.schema.tpl.json b/schemas/digitalIdentifier/DOI.schema.tpl.json index 64a90a51..e79da05d 100644 --- a/schemas/digitalIdentifier/DOI.schema.tpl.json +++ b/schemas/digitalIdentifier/DOI.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/DOI", + "_type": "core:DOI", "_categories": [ "publicationReference" ], diff --git a/schemas/digitalIdentifier/GRIDID.schema.tpl.json b/schemas/digitalIdentifier/GRIDID.schema.tpl.json index c2f64f86..9e6f85a5 100644 --- a/schemas/digitalIdentifier/GRIDID.schema.tpl.json +++ b/schemas/digitalIdentifier/GRIDID.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/GRIDID", + "_type": "core:GRIDID", "required": [ "identifier" ], diff --git a/schemas/digitalIdentifier/HANDLE.schema.tpl.json b/schemas/digitalIdentifier/HANDLE.schema.tpl.json index 65837c19..6449e075 100644 --- a/schemas/digitalIdentifier/HANDLE.schema.tpl.json +++ b/schemas/digitalIdentifier/HANDLE.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/HANDLE", + "_type": "core:HANDLE", "_categories": [ "publicationReference" ], diff --git a/schemas/digitalIdentifier/ISBN.schema.tpl.json b/schemas/digitalIdentifier/ISBN.schema.tpl.json index 0dc4efb1..4acbc3b5 100644 --- a/schemas/digitalIdentifier/ISBN.schema.tpl.json +++ b/schemas/digitalIdentifier/ISBN.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ISBN", + "_type": "core:ISBN", "_categories": [ "publicationReference" ], diff --git a/schemas/digitalIdentifier/ISSN.schema.tpl.json b/schemas/digitalIdentifier/ISSN.schema.tpl.json index 384ad1d6..8c6ea76b 100644 --- a/schemas/digitalIdentifier/ISSN.schema.tpl.json +++ b/schemas/digitalIdentifier/ISSN.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ISSN", + "_type": "core:ISSN", "_categories": [ "publicationReference" ], diff --git a/schemas/digitalIdentifier/IdentifiersDotOrgID.schema.tpl.json b/schemas/digitalIdentifier/IdentifiersDotOrgID.schema.tpl.json index d5c203da..f80daa06 100644 --- a/schemas/digitalIdentifier/IdentifiersDotOrgID.schema.tpl.json +++ b/schemas/digitalIdentifier/IdentifiersDotOrgID.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/IdentifiersDotOrgID", + "_type": "core:IdentifiersDotOrgID", "required": [ "identifier" ], diff --git a/schemas/digitalIdentifier/ORCID.schema.tpl.json b/schemas/digitalIdentifier/ORCID.schema.tpl.json index 7c6c5d93..d1dc54ca 100644 --- a/schemas/digitalIdentifier/ORCID.schema.tpl.json +++ b/schemas/digitalIdentifier/ORCID.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ORCID", + "_type": "core:ORCID", "required": [ "identifier" ], diff --git a/schemas/digitalIdentifier/RORID.schema.tpl.json b/schemas/digitalIdentifier/RORID.schema.tpl.json index 2237dc51..694a396f 100644 --- a/schemas/digitalIdentifier/RORID.schema.tpl.json +++ b/schemas/digitalIdentifier/RORID.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/RORID", + "_type": "core:RORID", "required": [ "identifier" ], diff --git a/schemas/digitalIdentifier/RRID.schema.tpl.json b/schemas/digitalIdentifier/RRID.schema.tpl.json index bca9316a..42380cb6 100644 --- a/schemas/digitalIdentifier/RRID.schema.tpl.json +++ b/schemas/digitalIdentifier/RRID.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/RRID", + "_type": "core:RRID", "required": [ "identifier" ], diff --git a/schemas/digitalIdentifier/SWHID.schema.tpl.json b/schemas/digitalIdentifier/SWHID.schema.tpl.json index b1fc5573..5bb841a4 100644 --- a/schemas/digitalIdentifier/SWHID.schema.tpl.json +++ b/schemas/digitalIdentifier/SWHID.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/SWHID", + "_type": "core:SWHID", "required": [ "identifier" ], diff --git a/schemas/digitalIdentifier/genericIdentifier.tpl.json b/schemas/digitalIdentifier/genericIdentifier.tpl.json index 2f6576f0..768b3a50 100644 --- a/schemas/digitalIdentifier/genericIdentifier.tpl.json +++ b/schemas/digitalIdentifier/genericIdentifier.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/GenericIdentifier", + "_type": "core:GenericIdentifier", "required": [ "emitter", "identifier" @@ -7,7 +7,7 @@ "properties": { "emitter": { "_instruction": "Add the organization that governs and/or emits the identifier.", - "_linkedTypes": ["https://openminds.ebrains.eu/core/Organization"] + "_linkedTypes": ["core:Organization"] }, "identifier": { "type": "string", diff --git a/schemas/digitalIdentifier/stockNumber.schema.tpl.json b/schemas/digitalIdentifier/stockNumber.schema.tpl.json index f5736491..6488274a 100644 --- a/schemas/digitalIdentifier/stockNumber.schema.tpl.json +++ b/schemas/digitalIdentifier/stockNumber.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/StockNumber", + "_type": "core:StockNumber", "required": [ "identifier", "vendor" @@ -12,7 +12,7 @@ "vendor": { "_instruction": "Add the vendor that has the item with this identifier in stock.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Organization" + "core:Organization" ] } } diff --git a/schemas/miscellaneous/comment.schema.tpl.json b/schemas/miscellaneous/comment.schema.tpl.json index 9bddfa78..65246197 100644 --- a/schemas/miscellaneous/comment.schema.tpl.json +++ b/schemas/miscellaneous/comment.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Comment", + "_type": "core:Comment", "required": [ "about", "comment", @@ -20,7 +20,7 @@ "commenter": { "_instruction": "Add the person that created this comment.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Person" + "core:Person" ] }, "timestamp": { diff --git a/schemas/miscellaneous/funding.schema.tpl.json b/schemas/miscellaneous/funding.schema.tpl.json index c3d1c340..2963fabd 100644 --- a/schemas/miscellaneous/funding.schema.tpl.json +++ b/schemas/miscellaneous/funding.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Funding", + "_type": "core:Funding", "required": [ "funder" ], diff --git a/schemas/miscellaneous/quantitativeValue.schema.tpl.json b/schemas/miscellaneous/quantitativeValue.schema.tpl.json index 56e16286..f34ebf9e 100644 --- a/schemas/miscellaneous/quantitativeValue.schema.tpl.json +++ b/schemas/miscellaneous/quantitativeValue.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/QuantitativeValue", + "_type": "core:QuantitativeValue", "required": [ "value" ], @@ -7,7 +7,7 @@ "typeOfUncertainty": { "_instruction": "Add the type of uncertainty used to determine the uncertainty for this quantitative value.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/TypeOfUncertainty" + "controlledTerms:TypeOfUncertainty" ] }, "uncertainty": { @@ -22,7 +22,7 @@ "unit": { "_instruction": "Add the unit of measurement of this quantitative value and its uncertainty.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/UnitOfMeasurement" + "controlledTerms:UnitOfMeasurement" ] }, "value": { diff --git a/schemas/miscellaneous/quantitativeValueArray.schema.tpl.json b/schemas/miscellaneous/quantitativeValueArray.schema.tpl.json index b2364732..f9a9da6c 100644 --- a/schemas/miscellaneous/quantitativeValueArray.schema.tpl.json +++ b/schemas/miscellaneous/quantitativeValueArray.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/QuantitativeValueArray", + "_type": "core:QuantitativeValueArray", "required": [ "values" ], @@ -23,13 +23,13 @@ "typeOfUncertainty": { "_instruction": "Add the type of estimation for the uncertainties.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/TypeOfUncertainty" + "controlledTerms:TypeOfUncertainty" ] }, "unit": { "_instruction": "Add the unit of measurement of the values and their uncertainties.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/UnitOfMeasurement" + "controlledTerms:UnitOfMeasurement" ] }, "values": { diff --git a/schemas/miscellaneous/quantitativeValueRange.schema.tpl.json b/schemas/miscellaneous/quantitativeValueRange.schema.tpl.json index ae50caab..1ab46383 100644 --- a/schemas/miscellaneous/quantitativeValueRange.schema.tpl.json +++ b/schemas/miscellaneous/quantitativeValueRange.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/QuantitativeValueRange", + "_type": "core:QuantitativeValueRange", "required": [ "maxValue", "minValue" @@ -12,7 +12,7 @@ "maxValueUnit": { "_instruction": "Add the unit of measurement for the maximum value.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/UnitOfMeasurement" + "controlledTerms:UnitOfMeasurement" ] }, "minValue": { @@ -22,7 +22,7 @@ "minValueUnit": { "_instruction": "Add the unit of measurement for the minimum value.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/UnitOfMeasurement" + "controlledTerms:UnitOfMeasurement" ] } } diff --git a/schemas/miscellaneous/researchProductGroup.schema.tpl.json b/schemas/miscellaneous/researchProductGroup.schema.tpl.json index c79722b8..17159312 100644 --- a/schemas/miscellaneous/researchProductGroup.schema.tpl.json +++ b/schemas/miscellaneous/researchProductGroup.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ResearchProductGroup", + "_type": "core:ResearchProductGroup", "required": [ "context", "hasPart" diff --git a/schemas/miscellaneous/webResource.schema.tpl.json b/schemas/miscellaneous/webResource.schema.tpl.json index 258a1257..8c2f3a01 100644 --- a/schemas/miscellaneous/webResource.schema.tpl.json +++ b/schemas/miscellaneous/webResource.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/WebResource", + "_type": "core:WebResource", "required": [ "IRI" ], @@ -11,7 +11,7 @@ "format": { "_instruction": "Add the expected content type of the document at this web resource.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "IRI": { diff --git a/schemas/products/dataset.schema.tpl.json b/schemas/products/dataset.schema.tpl.json index fdddb720..796e193c 100644 --- a/schemas/products/dataset.schema.tpl.json +++ b/schemas/products/dataset.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Dataset", + "_type": "core:Dataset", "_extends": "products/researchProduct.schema.tpl.json", "required": [ "author" @@ -17,8 +17,8 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product. Note that this digital identifier will be used to reference all attached research product versions.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/IdentifiersDotOrgID" + "core:DOI", + "core:IdentifiersDotOrgID" ] }, "hasVersion": { @@ -27,7 +27,7 @@ "uniqueItems": true, "_instruction": "Add all versions of this dataset.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DatasetVersion" + "core:DatasetVersion" ] } } diff --git a/schemas/products/datasetVersion.schema.tpl.json b/schemas/products/datasetVersion.schema.tpl.json index d780e631..dd5d8c30 100644 --- a/schemas/products/datasetVersion.schema.tpl.json +++ b/schemas/products/datasetVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/DatasetVersion", + "_type": "core:DatasetVersion", "_extends": "products/researchProductVersion.schema.tpl.json", "required": [ "dataType", @@ -25,7 +25,7 @@ "uniqueItems": true, "_instruction": "Add all behavioral protocols that were performed in this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/BehavioralProtocol" + "core:BehavioralProtocol" ] }, "dataType": { @@ -34,20 +34,20 @@ "uniqueItems": true, "_instruction": "Add all semantic data types (raw, derived and/or simulated) provided in this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/SemanticDataType" + "controlledTerms:SemanticDataType" ] }, "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/IdentifiersDotOrgID" + "core:DOI", + "core:IdentifiersDotOrgID" ] }, "ethicsAssessment": { "_instruction": "Add the result of the ethics assessment of this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/EthicsAssessment" + "controlledTerms:EthicsAssessment" ] }, "experimentalApproach": { @@ -56,7 +56,7 @@ "uniqueItems": true, "_instruction": "Add all experimental approaches which this dataset version has deployed.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach" + "controlledTerms:ExperimentalApproach" ] }, "inputData": { @@ -65,10 +65,10 @@ "uniqueItems": true, "_instruction": "Add the data that was used as input for this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/WebResource", + "core:DOI", + "core:File", + "core:FileBundle", + "core:WebResource", "https://openminds.ebrains.eu/sands/BrainAtlas", "https://openminds.ebrains.eu/sands/BrainAtlasVersion", "https://openminds.ebrains.eu/sands/CommonCoordinateSpace", @@ -81,20 +81,20 @@ "uniqueItems": true, "_instruction": "Add all dataset versions that can be used alternatively to this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DatasetVersion" + "core:DatasetVersion" ] }, "isNewVersionOf": { "_instruction": "Add the dataset version preceding this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DatasetVersion" + "core:DatasetVersion" ] }, "license": { "_instruction": "Add the license or an online available data usage agreement for this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/License", - "https://openminds.ebrains.eu/core/WebResource" + "core:License", + "core:WebResource" ] }, "preparationDesign": { @@ -103,7 +103,7 @@ "uniqueItems": true, "_instruction": "Add all preparation types used in this dataset version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/PreparationType" + "controlledTerms:PreparationType" ] }, "protocol": { @@ -112,7 +112,7 @@ "uniqueItems": true, "_instruction": "Add all protocols that were performed in this dataset version (e.g., for data acquisition or processing).", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Protocol" + "core:Protocol" ] }, "studiedSpecimen": { @@ -121,10 +121,10 @@ "uniqueItems": true, "_instruction": "Add all specimens or sets of specimen that were studied in this dataset.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Subject", - "https://openminds.ebrains.eu/core/SubjectGroup", - "https://openminds.ebrains.eu/core/TissueSample", - "https://openminds.ebrains.eu/core/TissueSampleCollection" + "core:Subject", + "core:SubjectGroup", + "core:TissueSample", + "core:TissueSampleCollection" ] }, "studyTarget": { diff --git a/schemas/products/device.schema.tpl.json b/schemas/products/device.schema.tpl.json index 109f967e..e215bbef 100644 --- a/schemas/products/device.schema.tpl.json +++ b/schemas/products/device.schema.tpl.json @@ -14,14 +14,14 @@ "deviceType": { "_instruction": "Add the type of this device.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/DeviceType" + "controlledTerms:DeviceType" ] }, "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this device.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/RRID" + "core:DOI", + "core:RRID" ] }, "lookupLabel": { diff --git a/schemas/products/metaDataModel.schema.tpl.json b/schemas/products/metaDataModel.schema.tpl.json index ddc4fd7d..84e6ae9c 100644 --- a/schemas/products/metaDataModel.schema.tpl.json +++ b/schemas/products/metaDataModel.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/MetaDataModel", + "_type": "core:MetaDataModel", "_extends": "products/researchProduct.schema.tpl.json", "required": [ "developer" @@ -17,8 +17,8 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product. Note that this digital identifier will be used to reference all attached research product versions.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/SWHID" + "core:DOI", + "core:SWHID" ] }, "hasVersion": { @@ -27,7 +27,7 @@ "uniqueItems": true, "_instruction": "Add all versions of this (meta)data model.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/MetaDataModelVersion" + "core:MetaDataModelVersion" ] } } diff --git a/schemas/products/metaDataModelVersion.schema.tpl.json b/schemas/products/metaDataModelVersion.schema.tpl.json index 525b39d2..f2843efd 100644 --- a/schemas/products/metaDataModelVersion.schema.tpl.json +++ b/schemas/products/metaDataModelVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/MetaDataModelVersion", + "_type": "core:MetaDataModelVersion", "_extends": "products/researchProductVersion.schema.tpl.json", "required": [ "license", @@ -18,8 +18,8 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/SWHID" + "core:DOI", + "core:SWHID" ] }, "isAlternativeVersionOf": { @@ -28,19 +28,19 @@ "uniqueItems": true, "_instruction": "Add all (meta)data model versions that can be used alternatively to this (meta)data model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/MetaDataModelVersion" + "core:MetaDataModelVersion" ] }, "isNewVersionOf": { "_instruction": "Add the (meta)data version preceding this (meta)data model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/MetaDataModelVersion" + "core:MetaDataModelVersion" ] }, "license": { "_instruction": "Add the license of this (meta)data model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/License" + "core:License" ] }, "serializationFormat": { @@ -49,7 +49,7 @@ "uniqueItems": true, "_instruction": "Add all content types in which (meta)data compliant with this (meta)data model version can be stored in.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "specificationFormat": { @@ -58,13 +58,13 @@ "uniqueItems": true, "_instruction": "Add all content types in which the schemas of this (meta)data model version are stored in.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "type": { "_instruction": "Add the type of this (meta)data model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/MetaDataModelType" + "controlledTerms:MetaDataModelType" ] } } diff --git a/schemas/products/model.schema.tpl.json b/schemas/products/model.schema.tpl.json index 251f2d6f..9fa15427 100644 --- a/schemas/products/model.schema.tpl.json +++ b/schemas/products/model.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Model", + "_type": "core:Model", "_extends": "products/researchProduct.schema.tpl.json", "required": [ "abstractionLevel", @@ -11,7 +11,7 @@ "abstractionLevel": { "_instruction": "Add the abstraction level of this computational model.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ModelAbstractionLevel" + "controlledTerms:ModelAbstractionLevel" ] }, "developer": { @@ -26,8 +26,8 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product. Note that this digital identifier will be used to reference all attached research product versions.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/SWHID" + "core:DOI", + "core:SWHID" ] }, "hasVersion": { @@ -36,13 +36,13 @@ "uniqueItems": true, "_instruction": "Add all versions of this computational model.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ModelVersion" + "core:ModelVersion" ] }, "scope": { "_instruction": "Add the scope of this computational model.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ModelScope" + "controlledTerms:ModelScope" ] }, "studyTarget": { diff --git a/schemas/products/modelVersion.schema.tpl.json b/schemas/products/modelVersion.schema.tpl.json index 93748dfd..022eb967 100644 --- a/schemas/products/modelVersion.schema.tpl.json +++ b/schemas/products/modelVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ModelVersion", + "_type": "core:ModelVersion", "_extends": "products/researchProductVersion.schema.tpl.json", "required": [ "format", @@ -18,8 +18,8 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/SWHID" + "core:DOI", + "core:SWHID" ] }, "format": { @@ -28,7 +28,7 @@ "uniqueItems": true, "_instruction": "Add the content type of this computational model version, or the content types of the files composing the model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "inputData": { @@ -37,10 +37,10 @@ "uniqueItems": true, "_instruction": "Add the data that was used as input for this computational model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/WebResource" + "core:DOI", + "core:File", + "core:FileBundle", + "core:WebResource" ] }, "isAlternativeVersionOf": { @@ -49,13 +49,13 @@ "uniqueItems": true, "_instruction": "Add all computational model versions that can be used alternatively to this computational model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ModelVersion" + "core:ModelVersion" ] }, "isNewVersionOf": { "_instruction": "Add the computational model version preceding this computational model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ModelVersion" + "core:ModelVersion" ] }, "license": { @@ -64,7 +64,7 @@ "uniqueItems": true, "_instruction": "Add all licenses of this computational model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/License" + "core:License" ] }, "outputData": { @@ -73,10 +73,10 @@ "uniqueItems": true, "_instruction": "Add the data that was generated as output by this computational model version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/WebResource" + "core:DOI", + "core:File", + "core:FileBundle", + "core:WebResource" ] } } diff --git a/schemas/products/project.schema.tpl.json b/schemas/products/project.schema.tpl.json index 57a00099..2ad1318f 100644 --- a/schemas/products/project.schema.tpl.json +++ b/schemas/products/project.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Project", + "_type": "core:Project", "required": [ "description", "fullName", diff --git a/schemas/products/researchProductVersion.schema.tpl.json b/schemas/products/researchProductVersion.schema.tpl.json index ed27c91c..16be5c4c 100644 --- a/schemas/products/researchProductVersion.schema.tpl.json +++ b/schemas/products/researchProductVersion.schema.tpl.json @@ -14,13 +14,13 @@ "accessibility": { "_instruction": "Add the accessibility of the data for this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ProductAccessibility" + "controlledTerms:ProductAccessibility" ] }, "copyright": { "_instruction": "Enter the copyright information of this research product version.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Copyright" + "core:Copyright" ] }, "custodian": { @@ -39,10 +39,10 @@ "fullDocumentation": { "_instruction": "Add the publication or file that acts as the full documentation of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/ISBN", - "https://openminds.ebrains.eu/core/WebResource" + "core:DOI", + "core:File", + "core:ISBN", + "core:WebResource" ] }, "fullName": { @@ -55,7 +55,7 @@ "uniqueItems": true, "_instruction": "Add all funding information of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Funding" + "core:Funding" ] }, "homepage": { @@ -84,7 +84,7 @@ "uniqueItems": true, "_instruction": "Add any other contributions to this research product version that are not covered under 'author'/'developer' or 'custodian'.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/Contribution" + "core:Contribution" ] }, "relatedPublication": { @@ -106,7 +106,7 @@ "repository": { "_instruction": "Add the file repository of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/FileRepository" + "core:FileRepository" ] }, "shortName": { diff --git a/schemas/products/setup.schema.tpl.json b/schemas/products/setup.schema.tpl.json index 8188d119..735bfa6a 100644 --- a/schemas/products/setup.schema.tpl.json +++ b/schemas/products/setup.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Setup", + "_type": "core:Setup", "_categories": [ "setupComponent" ], @@ -45,7 +45,7 @@ "uniqueItems": true, "_instruction": "Add all types that describe this setup.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/SetupType" + "controlledTerms:SetupType" ] } } diff --git a/schemas/products/software.schema.tpl.json b/schemas/products/software.schema.tpl.json index 81891336..a6712f57 100644 --- a/schemas/products/software.schema.tpl.json +++ b/schemas/products/software.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Software", + "_type": "core:Software", "_extends": "products/researchProduct.schema.tpl.json", "required": [ "developer" @@ -17,9 +17,9 @@ "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product. Note that this digital identifier will be used to reference all attached research product versions.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/RRID", - "https://openminds.ebrains.eu/core/SWHID" + "core:DOI", + "core:RRID", + "core:SWHID" ] }, "hasVersion": { @@ -28,7 +28,7 @@ "uniqueItems": true, "_instruction": "Add all versions of this software tool.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:SoftwareVersion" ] } } diff --git a/schemas/products/softwareVersion.schema.tpl.json b/schemas/products/softwareVersion.schema.tpl.json index 7abdfd55..4fa6f98f 100644 --- a/schemas/products/softwareVersion.schema.tpl.json +++ b/schemas/products/softwareVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/SoftwareVersion", + "_type": "core:SoftwareVersion", "_extends": "products/researchProductVersion.schema.tpl.json", "_categories": [ "setupComponent" @@ -20,7 +20,7 @@ "uniqueItems": true, "_instruction": "Add all categories to which this software version belongs.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/SoftwareApplicationCategory" + "controlledTerms:SoftwareApplicationCategory" ] }, "developer": { @@ -38,15 +38,15 @@ "uniqueItems": true, "_instruction": "Add all operating devices compatible with this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/OperatingDevice" + "controlledTerms:OperatingDevice" ] }, "digitalIdentifier": { "_instruction": "Add the globally unique and persistent digital identifier of this research product version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/SWHID", - "https://openminds.ebrains.eu/core/RRID" + "core:DOI", + "core:SWHID", + "core:RRID" ] }, "feature": { @@ -55,7 +55,7 @@ "uniqueItems": true, "_instruction": "Add all distinguishing characteristics of this software version (e.g., performance, portability or functionality).", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/SoftwareFeature" + "controlledTerms:SoftwareFeature" ] }, "hasPart": { @@ -64,7 +64,10 @@ "uniqueItems": true, "_instruction": "Add all software versions that supplement this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:ModelVersion", + "core:SoftwareVersion", + "sands:BrainAtlasVersion", + "sands:CommonCoordinateSpaceVersion" ] }, "inputFormat": { @@ -73,7 +76,7 @@ "uniqueItems": true, "_instruction": "Add all content types that can be used as input by this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "isAlternativeVersionOf": { @@ -82,13 +85,13 @@ "uniqueItems": true, "_instruction": "Add all software versions that can be used alternatively to this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:SoftwareVersion" ] }, "isNewVersionOf": { "_instruction": "Add the software version preceding this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:SoftwareVersion" ] }, "language": { @@ -97,7 +100,7 @@ "uniqueItems": true, "_instruction": "Add all languages supported by this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Language" + "controlledTerms:Language" ] }, "license": { @@ -106,7 +109,7 @@ "uniqueItems": true, "_instruction": "Add all licenses of this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/License" + "core:License" ] }, "operatingSystem": { @@ -115,7 +118,7 @@ "uniqueItems": true, "_instruction": "Add all operating systems supported by this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/OperatingSystem" + "controlledTerms:OperatingSystem" ] }, "outputFormat": { @@ -124,7 +127,7 @@ "uniqueItems": true, "_instruction": "Add all content types that can be generated as output by this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "programmingLanguage": { @@ -133,7 +136,7 @@ "uniqueItems": true, "_instruction": "Add all programming languages used to develop this software version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/ProgrammingLanguage" + "controlledTerms:ProgrammingLanguage" ] }, "requirement": { diff --git a/schemas/products/webService.schema.tpl.json b/schemas/products/webService.schema.tpl.json index 8cb66dbd..5ae96f81 100644 --- a/schemas/products/webService.schema.tpl.json +++ b/schemas/products/webService.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/WebService", + "_type": "core:WebService", "_extends": "products/researchProduct.schema.tpl.json", "required": [ "developer" @@ -20,7 +20,7 @@ "uniqueItems": true, "_instruction": "Add all versions of this web service.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/WebServiceVersion" + "core:WebServiceVersion" ] } } diff --git a/schemas/products/webServiceVersion.schema.tpl.json b/schemas/products/webServiceVersion.schema.tpl.json index f8b84dce..feb5fa8d 100644 --- a/schemas/products/webServiceVersion.schema.tpl.json +++ b/schemas/products/webServiceVersion.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/WebServiceVersion", + "_type": "core:WebServiceVersion", "_extends": "products/researchProductVersion.schema.tpl.json", "properties": { "developer": { @@ -17,7 +17,7 @@ "uniqueItems": true, "_instruction": "Add all software versions that are components of this web service version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SoftwareVersion" + "core:SoftwareVersion" ] }, "inputFormat": { @@ -26,7 +26,7 @@ "uniqueItems": true, "_instruction": "Add all content types that can be used as input by this web service version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "isAlternativeVersionOf": { @@ -35,13 +35,13 @@ "uniqueItems": true, "_instruction": "Add all web service versions that can be used alternatively to this web service version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/WebServiceVersion" + "core:WebServiceVersion" ] }, "isNewVersionOf": { "_instruction": "Add the web service version preceding this web service version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/WebServiceVersion" + "core:WebServiceVersion" ] }, "outputFormat": { @@ -50,7 +50,7 @@ "uniqueItems": true, "_instruction": "Add all content types that can be generated as output by this web service version.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] } } diff --git a/schemas/research/activity.schema.tpl.json b/schemas/research/activity.schema.tpl.json index e64b44ca..402be558 100644 --- a/schemas/research/activity.schema.tpl.json +++ b/schemas/research/activity.schema.tpl.json @@ -10,7 +10,7 @@ "uniqueItems": true, "_instruction": "Add any user-defined parameters grouped in context-specific sets that are not covered in the standardized properties of this activity.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/CustomPropertySet" + "core:CustomPropertySet" ] }, "description": { @@ -31,8 +31,8 @@ "uniqueItems": true, "_instruction": "Add all inputs used by this activity.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle" + "core:File", + "core:FileBundle" ] }, "lookupLabel": { @@ -45,8 +45,8 @@ "uniqueItems": true, "_instruction": "Add all outputs generated by this activity.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle" + "core:File", + "core:FileBundle" ] }, "performedBy": { diff --git a/schemas/research/behavioralProtocol.schema.tpl.json b/schemas/research/behavioralProtocol.schema.tpl.json index 92d2707c..37b9f330 100644 --- a/schemas/research/behavioralProtocol.schema.tpl.json +++ b/schemas/research/behavioralProtocol.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/BehavioralProtocol", + "_type": "core:BehavioralProtocol", "_categories": [ "fileOrigin" ], @@ -14,9 +14,9 @@ "uniqueItems": true, "_instruction": "Add all sources in which this behavioral protocol is described in detail.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/WebResource" + "core:DOI", + "core:File", + "core:WebResource" ] }, "description": { @@ -37,8 +37,8 @@ "uniqueItems": true, "_instruction": "Add all stimulation approaches and/or techniques used within this behavioral protocol.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/StimulationApproach", - "https://openminds.ebrains.eu/controlledTerms/StimulationTechnique" + "controlledTerms:StimulationApproach", + "controlledTerms:StimulationTechnique" ] }, "stimulusType": { diff --git a/schemas/research/configuration.schema.tpl.json b/schemas/research/configuration.schema.tpl.json index cacaf48a..63c93129 100644 --- a/schemas/research/configuration.schema.tpl.json +++ b/schemas/research/configuration.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Configuration", + "_type": "core:Configuration", "required": [ "configuration", "format" @@ -12,7 +12,7 @@ "format": { "_instruction": "Add the content type of this configuration.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/ContentType" + "core:ContentType" ] }, "lookupLabel": { diff --git a/schemas/research/customPropertySet.schema.tpl.json b/schemas/research/customPropertySet.schema.tpl.json index 027e5cca..e86aabdc 100644 --- a/schemas/research/customPropertySet.schema.tpl.json +++ b/schemas/research/customPropertySet.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/CustomPropertySet", + "_type": "core:CustomPropertySet", "required": [ "context", "dataLocation", @@ -13,9 +13,9 @@ "dataLocation": { "_instruction": "Add the location of the data that define the custom property set for the given context (e.g., stored as file or other entities such as property-value lists).", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Configuration", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/PropertyValueList" + "core:Configuration", + "core:File", + "core:PropertyValueList" ] }, "relevantFor": { diff --git a/schemas/research/deviceUsage.schema.tpl.json b/schemas/research/deviceUsage.schema.tpl.json index 6f017053..e6dda232 100644 --- a/schemas/research/deviceUsage.schema.tpl.json +++ b/schemas/research/deviceUsage.schema.tpl.json @@ -12,8 +12,8 @@ "uniqueItems": true, "_instruction": "Add all files or file bundles containing additional information about the usage of this device.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle" + "core:File", + "core:FileBundle" ] }, "lookupLabel": { @@ -23,8 +23,8 @@ "usedSpecimen": { "_instruction": "Add the state of the tissue sample or subject that this device was used on.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectState", - "https://openminds.ebrains.eu/core/TissueSampleState" + "core:SubjectState", + "core:TissueSampleState" ] } } diff --git a/schemas/research/experimentalActivity.schema.tpl.json b/schemas/research/experimentalActivity.schema.tpl.json index 31350d3c..03ac28ca 100644 --- a/schemas/research/experimentalActivity.schema.tpl.json +++ b/schemas/research/experimentalActivity.schema.tpl.json @@ -8,13 +8,13 @@ "isPartOf": { "_instruction": "Add the dataset version in which this activity was conducted.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DatasetVersion" + "core:DatasetVersion" ] }, "preparationDesign": { "_instruction": "Add the initial preparation type for this activity.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/PreparationType" + "controlledTerms:PreparationType" ] }, "protocol": { @@ -23,7 +23,7 @@ "uniqueItems": true, "_instruction": "Add all protocols used during this activity.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Protocol" + "core:Protocol" ] } } diff --git a/schemas/research/numericalProperty.schema.tpl.json b/schemas/research/numericalProperty.schema.tpl.json index 36249ca9..33f4d40b 100644 --- a/schemas/research/numericalProperty.schema.tpl.json +++ b/schemas/research/numericalProperty.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/NumericalProperty", + "_type": "core:NumericalProperty", "required": [ "name", "value" @@ -14,8 +14,8 @@ "minItems": 1, "_instruction": "Enter all quantitative values that are described by this numerical property.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue", - "https://openminds.ebrains.eu/core/QuantitativeValueRange" + "core:QuantitativeValue", + "core:QuantitativeValueRange" ] } } diff --git a/schemas/research/propertyValueList.schema.tpl.json b/schemas/research/propertyValueList.schema.tpl.json index d4b83848..04c46451 100644 --- a/schemas/research/propertyValueList.schema.tpl.json +++ b/schemas/research/propertyValueList.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/PropertyValueList", + "_type": "core:PropertyValueList", "required": [ "propertyValuePair" ], @@ -14,8 +14,8 @@ "uniqueItems": true, "_instruction": "Enter all numerical and string property-value pairs that belong to this property-value list.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/NumericalProperty", - "https://openminds.ebrains.eu/core/StringProperty" + "core:NumericalProperty", + "core:StringProperty" ] } } diff --git a/schemas/research/protocol.schema.tpl.json b/schemas/research/protocol.schema.tpl.json index cd75a702..b52ba837 100644 --- a/schemas/research/protocol.schema.tpl.json +++ b/schemas/research/protocol.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Protocol", + "_type": "core:Protocol", "required": [ "description", "name", @@ -9,9 +9,9 @@ "describedIn": { "_instruction": "Add a publication or file in which this protocol is (originally) described in detail.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/DOI", - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/WebResource" + "core:DOI", + "core:File", + "core:WebResource" ] }, "description": { diff --git a/schemas/research/protocolExecution.schema.tpl.json b/schemas/research/protocolExecution.schema.tpl.json index 57ddb1e4..5fdca0b0 100644 --- a/schemas/research/protocolExecution.schema.tpl.json +++ b/schemas/research/protocolExecution.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/ProtocolExecution", + "_type": "core:ProtocolExecution", "_extends": "research/experimentalActivity.schema.tpl.json", "properties": { "behavioralProtocol": { @@ -8,29 +8,29 @@ "uniqueItems": true, "_instruction": "Add all behavioral protocols that were performed during this protocol execution.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/BehavioralProtocol" + "core:BehavioralProtocol" ] }, "input": { "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/SubjectGroupState", - "https://openminds.ebrains.eu/core/SubjectState", - "https://openminds.ebrains.eu/core/TissueSampleCollectionState", - "https://openminds.ebrains.eu/core/TissueSampleState", + "core:File", + "core:FileBundle", + "core:SubjectGroupState", + "core:SubjectState", + "core:TissueSampleCollectionState", + "core:TissueSampleState", "https://openminds.ebrains.eu/sands/BrainAtlasVersion", "https://openminds.ebrains.eu/sands/CommonCoordinateSpaceVersion" ] }, "output": { "_linkedTypes": [ - "https://openminds.ebrains.eu/core/File", - "https://openminds.ebrains.eu/core/FileBundle", - "https://openminds.ebrains.eu/core/SubjectGroupState", - "https://openminds.ebrains.eu/core/SubjectState", - "https://openminds.ebrains.eu/core/TissueSampleCollectionState", - "https://openminds.ebrains.eu/core/TissueSampleState" + "core:File", + "core:FileBundle", + "core:SubjectGroupState", + "core:SubjectState", + "core:TissueSampleCollectionState", + "core:TissueSampleState" ] } } diff --git a/schemas/research/specimen.schema.tpl.json b/schemas/research/specimen.schema.tpl.json index 9653b3e3..94d5bb42 100644 --- a/schemas/research/specimen.schema.tpl.json +++ b/schemas/research/specimen.schema.tpl.json @@ -9,7 +9,7 @@ "biologicalSex": { "_instruction": "Add the biological sex of this specimen.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/BiologicalSex" + "controlledTerms:BiologicalSex" ] }, "internalIdentifier": { @@ -23,8 +23,8 @@ "species": { "_instruction": "Add the species or strain (a sub-type of a genetic variant of species) of this specimen.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Species", - "https://openminds.ebrains.eu/core/Strain" + "controlledTerms:Species", + "core:Strain" ] } } diff --git a/schemas/research/specimenSet.schema.tpl.json b/schemas/research/specimenSet.schema.tpl.json index 7d0be557..ea0ae4bb 100644 --- a/schemas/research/specimenSet.schema.tpl.json +++ b/schemas/research/specimenSet.schema.tpl.json @@ -16,7 +16,7 @@ "uniqueItems": true, "_instruction": "Add the biological sex of all specimen in this set.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/BiologicalSex" + "controlledTerms:BiologicalSex" ] }, "internalIdentifier": { @@ -33,8 +33,8 @@ "uniqueItems": true, "_instruction": "Add the species and/or strain (a sub-type of a genetic variant of species) of all specimen in this set.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Species", - "https://openminds.ebrains.eu/core/Strain" + "controlledTerms:Species", + "core:Strain" ] } } diff --git a/schemas/research/specimenState.schema.tpl.json b/schemas/research/specimenState.schema.tpl.json index f4943308..fc7eb6dd 100644 --- a/schemas/research/specimenState.schema.tpl.json +++ b/schemas/research/specimenState.schema.tpl.json @@ -10,8 +10,8 @@ "age": { "_instruction": "Enter the age of the specimen (set) in this state.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue", - "https://openminds.ebrains.eu/core/QuantitativeValueRange" + "core:QuantitativeValue", + "core:QuantitativeValueRange" ] }, "internalIdentifier": { @@ -28,22 +28,22 @@ "uniqueItems": true, "_instruction": "Add all (human) diseases and/or conditions that the specimen (set) in this state has and/or is a model for.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Disease", - "https://openminds.ebrains.eu/controlledTerms/DiseaseModel" + "controlledTerms:Disease", + "controlledTerms:DiseaseModel" ] }, "relativeTimeIndication": { "_instruction": "If there is a temporal relation between the states of a specimen (set), enter the relative time that has passed between this and the preceding specimen (set) state referenced under 'descendedFrom'.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue", - "https://openminds.ebrains.eu/core/QuantitativeValueRange" + "core:QuantitativeValue", + "core:QuantitativeValueRange" ] }, "weight": { "_instruction": "Enter the weight of the specimen (set) in this state.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/QuantitativeValue", - "https://openminds.ebrains.eu/core/QuantitativeValueRange" + "core:QuantitativeValue", + "core:QuantitativeValueRange" ] } } diff --git a/schemas/research/strain.schema.tpl.json b/schemas/research/strain.schema.tpl.json index d3842a5f..49839d49 100644 --- a/schemas/research/strain.schema.tpl.json +++ b/schemas/research/strain.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Strain", + "_type": "core:Strain", "required": [ "geneticStrainType", "name", @@ -22,13 +22,13 @@ "uniqueItems": true, "_instruction": "Add the background strain that explains the majority of the genetic background and/or causes the majority of the prominent traits. If two strains contributed equally, state both.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/Strain" + "core:Strain" ] }, "breedingType": { "_instruction": "Add the breeding type for this strain.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/BreedingType" + "controlledTerms:BreedingType" ] }, "description": { @@ -38,7 +38,7 @@ "digitalIdentifier": { "_instruction": "Add the 'Research Resource Identifier' (RRID) of this strain.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/RRID" + "core:RRID" ] }, "diseaseModel": { @@ -47,14 +47,14 @@ "uniqueItems": true, "_instruction": "Add all (human) diseases and/or conditions that this strain is a model for.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Disease", - "https://openminds.ebrains.eu/controlledTerms/DiseaseModel" + "controlledTerms:Disease", + "controlledTerms:DiseaseModel" ] }, "geneticStrainType": { "_instruction": "Add the genetic background type of this strain.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/GeneticStrainType" + "controlledTerms:GeneticStrainType" ] }, "laboratoryCode": { @@ -85,13 +85,13 @@ "species": { "_instruction": "Add the species of this strain.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Species" + "controlledTerms:Species" ] }, "stockNumber": { "_instruction": "Add the stock number from the vendor the strain was supplied from/is in stock at.", "_embeddedTypes": [ - "https://openminds.ebrains.eu/core/StockNumber" + "core:StockNumber" ] }, "synonym": { diff --git a/schemas/research/stringProperty.schema.tpl.json b/schemas/research/stringProperty.schema.tpl.json index 97b7f5c0..32b17745 100644 --- a/schemas/research/stringProperty.schema.tpl.json +++ b/schemas/research/stringProperty.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/StringProperty", + "_type": "core:StringProperty", "required": [ "name", "value" diff --git a/schemas/research/subject.schema.tpl.json b/schemas/research/subject.schema.tpl.json index 2b6f5788..91afaf4b 100644 --- a/schemas/research/subject.schema.tpl.json +++ b/schemas/research/subject.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/Subject", + "_type": "core:Subject", "_extends": "research/specimen.schema.tpl.json", "required": [ "studiedState" @@ -11,7 +11,7 @@ "uniqueItems": true, "_instruction": "Add all subject groups of which this subject is a member.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectGroup" + "core:SubjectGroup" ] }, "studiedState": { @@ -20,7 +20,7 @@ "uniqueItems": true, "_instruction": "Add all states in which this subject was studied.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectState" + "core:SubjectState" ] } } diff --git a/schemas/research/subjectGroup.schema.tpl.json b/schemas/research/subjectGroup.schema.tpl.json index bc30421d..4f40ac4a 100644 --- a/schemas/research/subjectGroup.schema.tpl.json +++ b/schemas/research/subjectGroup.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/SubjectGroup", + "_type": "core:SubjectGroup", "_extends": "research/specimenSet.schema.tpl.json", "required": [ "studiedState" @@ -16,7 +16,7 @@ "uniqueItems": true, "_instruction": "Add all states in which this subject group was studied.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectGroupState" + "core:SubjectGroupState" ] } } diff --git a/schemas/research/subjectGroupState.schema.tpl.json b/schemas/research/subjectGroupState.schema.tpl.json index ec2b4d4c..009180aa 100644 --- a/schemas/research/subjectGroupState.schema.tpl.json +++ b/schemas/research/subjectGroupState.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/SubjectGroupState", + "_type": "core:SubjectGroupState", "_extends": "research/specimenState.schema.tpl.json", "required": [ "ageCategory" @@ -11,7 +11,7 @@ "uniqueItems": true, "_instruction": "Add the age category of the subject in this state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/AgeCategory" + "controlledTerms:AgeCategory" ] }, "attribute": { @@ -20,13 +20,13 @@ "uniqueItems": true, "_instruction": "Add all attributes that can be ascribed to this subject group state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/SubjectAttribute" + "controlledTerms:SubjectAttribute" ] }, "descendedFrom": { "_instruction": "Add the previous subject group state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectGroupState" + "core:SubjectGroupState" ] }, "handedness": { @@ -35,7 +35,7 @@ "uniqueItems": true, "_instruction": "Add all preferred types of handedness of the subject group in this state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Handedness" + "controlledTerms:Handedness" ] } } diff --git a/schemas/research/subjectState.schema.tpl.json b/schemas/research/subjectState.schema.tpl.json index 9068a744..c1937064 100644 --- a/schemas/research/subjectState.schema.tpl.json +++ b/schemas/research/subjectState.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/SubjectState", + "_type": "core:SubjectState", "_extends": "research/specimenState.schema.tpl.json", "required": [ "ageCategory" @@ -8,7 +8,7 @@ "ageCategory": { "_instruction": "Add the age category of the subject in this state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/AgeCategory" + "controlledTerms:AgeCategory" ] }, "attribute": { @@ -17,19 +17,19 @@ "uniqueItems": true, "_instruction": "Add all attributes that can be ascribed to this subject state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/SubjectAttribute" + "controlledTerms:SubjectAttribute" ] }, "descendedFrom": { "_instruction": "Add the previous subject state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectState" + "core:SubjectState" ] }, "handedness": { "_instruction": "Add the preferred handedness of the subject in this state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Handedness" + "controlledTerms:Handedness" ] } } diff --git a/schemas/research/tissueSample.schema.tpl.json b/schemas/research/tissueSample.schema.tpl.json index 652cc376..6b4117dc 100644 --- a/schemas/research/tissueSample.schema.tpl.json +++ b/schemas/research/tissueSample.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/TissueSample", + "_type": "core:TissueSample", "_extends": "research/specimen.schema.tpl.json", "required": [ "origin", @@ -22,7 +22,7 @@ "uniqueItems": true, "_instruction": "Add all tissue sample collections this tissue sample is part of.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/TissueSampleCollection" + "core:TissueSampleCollection" ] }, "laterality": { @@ -32,15 +32,15 @@ "uniqueItems": true, "_instruction": "Add one or both sides of the body, bilateral organ or bilateral organ part that this tissue sample originates from.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Laterality" + "controlledTerms:Laterality" ] }, "origin": { "_instruction": "Add the biogical origin of this tissue sample.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/CellType", - "https://openminds.ebrains.eu/controlledTerms/Organ", - "https://openminds.ebrains.eu/controlledTerms/OrganismSubstance" + "controlledTerms:CellType", + "controlledTerms:Organ", + "controlledTerms:OrganismSubstance" ] }, "studiedState": { @@ -49,13 +49,13 @@ "uniqueItems": true, "_instruction": "Add all states in which this tissue sample was studied.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/TissueSampleState" + "core:TissueSampleState" ] }, "type": { "_instruction": "Add the type of this tissue sample.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/TissueSampleType" + "controlledTerms:TissueSampleType" ] } } diff --git a/schemas/research/tissueSampleCollection.schema.tpl.json b/schemas/research/tissueSampleCollection.schema.tpl.json index dd40e6a9..55817a9c 100644 --- a/schemas/research/tissueSampleCollection.schema.tpl.json +++ b/schemas/research/tissueSampleCollection.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/TissueSampleCollection", + "_type": "core:TissueSampleCollection", "_extends": "research/specimenSet.schema.tpl.json", "required": [ "origin", @@ -23,7 +23,7 @@ "uniqueItems": true, "_instruction": "Add one or both sides of the body, bilateral organ or bilateral organ part that this tissue sample collection originates from.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/Laterality" + "controlledTerms:Laterality" ] }, "numberOfTissueSamples": { @@ -37,9 +37,9 @@ "uniqueItems": true, "_instruction": "Add the biogical origin of all tissue samples in this collection.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/CellType", - "https://openminds.ebrains.eu/controlledTerms/Organ", - "https://openminds.ebrains.eu/controlledTerms/OrganismSubstance" + "controlledTerms:CellType", + "controlledTerms:Organ", + "controlledTerms:OrganismSubstance" ] }, "studiedState": { @@ -48,7 +48,7 @@ "uniqueItems": true, "_instruction": "Add all states in which this tissue sample collection was studied.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/TissueSampleCollectionState" + "core:TissueSampleCollectionState" ] }, "type": { @@ -57,7 +57,7 @@ "uniqueItems": true, "_instruction": "Add the type of all tissue samples in this collection.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/TissueSampleType" + "controlledTerms:TissueSampleType" ] } } diff --git a/schemas/research/tissueSampleCollectionState.schema.tpl.json b/schemas/research/tissueSampleCollectionState.schema.tpl.json index 780d11dd..1bce2b52 100644 --- a/schemas/research/tissueSampleCollectionState.schema.tpl.json +++ b/schemas/research/tissueSampleCollectionState.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/TissueSampleCollectionState", + "_type": "core:TissueSampleCollectionState", "_extends": "research/specimenState.schema.tpl.json", "properties": { "attribute": { @@ -8,7 +8,7 @@ "uniqueItems": true, "_instruction": "Add all attributes that can be ascribed to this tissue sample collection state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/TissueSampleAttribute" + "controlledTerms:TissueSampleAttribute" ] }, "descendedFrom": { @@ -17,10 +17,10 @@ "uniqueItems": true, "_instruction": "Add all specimen states used to produce or obtain this tissue sample collection state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectGroupState", - "https://openminds.ebrains.eu/core/SubjectState", - "https://openminds.ebrains.eu/core/TissueSampleCollectionState", - "https://openminds.ebrains.eu/core/TissueSampleState" + "core:SubjectGroupState", + "core:SubjectState", + "core:TissueSampleCollectionState", + "core:TissueSampleState" ] } } diff --git a/schemas/research/tissueSampleState.schema.tpl.json b/schemas/research/tissueSampleState.schema.tpl.json index 27856b61..ee507777 100644 --- a/schemas/research/tissueSampleState.schema.tpl.json +++ b/schemas/research/tissueSampleState.schema.tpl.json @@ -1,5 +1,5 @@ { - "_type": "https://openminds.ebrains.eu/core/TissueSampleState", + "_type": "core:TissueSampleState", "_extends": "research/specimenState.schema.tpl.json", "properties": { "attribute": { @@ -8,7 +8,7 @@ "uniqueItems": true, "_instruction": "Add all attributes that can be ascribed to this tissue sample state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/controlledTerms/TissueSampleAttribute" + "controlledTerms:TissueSampleAttribute" ] }, "descendedFrom": { @@ -17,10 +17,10 @@ "uniqueItems": true, "_instruction": "Add all specimen states used to produce or obtain this tissue sample state.", "_linkedTypes": [ - "https://openminds.ebrains.eu/core/SubjectGroupState", - "https://openminds.ebrains.eu/core/SubjectState", - "https://openminds.ebrains.eu/core/TissueSampleCollectionState", - "https://openminds.ebrains.eu/core/TissueSampleState" + "core:SubjectGroupState", + "core:SubjectState", + "core:TissueSampleCollectionState", + "core:TissueSampleState" ] } } diff --git a/version.txt b/version.txt index c694117f..47e5d40a 100644 --- a/version.txt +++ b/version.txt @@ -1 +1 @@ -v4 +v5