From a1d836c2672a7342240f85fd18a795af512551e0 Mon Sep 17 00:00:00 2001
From: adamstruck <strucka@ohsu.edu>
Date: Mon, 28 Jan 2019 16:51:50 -0800
Subject: [PATCH] update docs

---
 docs/docs/compute/aws-batch/index.html       |   9 +
 docs/docs/compute/deployment/index.html      |   9 +
 docs/docs/compute/grid-engine/index.html     |   9 +
 docs/docs/compute/htcondor/index.html        |   9 +
 docs/docs/compute/index.html                 |   9 +
 docs/docs/compute/pbs-torque/index.html      |   9 +
 docs/docs/compute/slurm/index.html           |   9 +
 docs/docs/databases/boltdb/index.html        |   9 +
 docs/docs/databases/datastore/index.html     |   9 +
 docs/docs/databases/dynamodb/index.html      |   9 +
 docs/docs/databases/elasticsearch/index.html |   9 +
 docs/docs/databases/index.html               |   9 +
 docs/docs/databases/mongodb/index.html       |   9 +
 docs/docs/development/developers/index.html  |   9 +
 docs/docs/development/index.html             |   9 +
 docs/docs/events/index.html                  |   9 +
 docs/docs/events/kafka/index.html            |   9 +
 docs/docs/index.html                         |   9 +
 docs/docs/index.xml                          |  12 +
 docs/docs/metrics/index.html                 |   9 +
 docs/docs/metrics/prometheus/index.html      |   9 +
 docs/docs/security/basic/index.html          |   9 +
 docs/docs/security/index.html                |   9 +
 docs/docs/storage/ftp/index.html             | 360 +++++++++++++++++++
 docs/docs/storage/google-storage/index.html  |   9 +
 docs/docs/storage/http/index.html            |   9 +
 docs/docs/storage/index.html                 |   9 +
 docs/docs/storage/local/index.html           |   9 +
 docs/docs/storage/s3/index.html              |   9 +
 docs/docs/storage/swift/index.html           |   9 +
 docs/docs/tasks/index.html                   |   9 +
 docs/download/index.html                     |  15 +-
 docs/index.html                              |   2 +-
 docs/index.xml                               |  14 +-
 docs/sitemap.xml                             |   4 +
 35 files changed, 663 insertions(+), 5 deletions(-)
 create mode 100644 docs/docs/storage/ftp/index.html

diff --git a/docs/docs/compute/aws-batch/index.html b/docs/docs/compute/aws-batch/index.html
index 01bc987b1..64b08cf38 100644
--- a/docs/docs/compute/aws-batch/index.html
+++ b/docs/docs/compute/aws-batch/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/compute/deployment/index.html b/docs/docs/compute/deployment/index.html
index b6c12a6bb..76456ba02 100644
--- a/docs/docs/compute/deployment/index.html
+++ b/docs/docs/compute/deployment/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/compute/grid-engine/index.html b/docs/docs/compute/grid-engine/index.html
index 88d02fd42..cd3562639 100644
--- a/docs/docs/compute/grid-engine/index.html
+++ b/docs/docs/compute/grid-engine/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/compute/htcondor/index.html b/docs/docs/compute/htcondor/index.html
index 0e0a79fae..ea37ac412 100644
--- a/docs/docs/compute/htcondor/index.html
+++ b/docs/docs/compute/htcondor/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/compute/index.html b/docs/docs/compute/index.html
index ed7d20860..56b4a3e2f 100644
--- a/docs/docs/compute/index.html
+++ b/docs/docs/compute/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/compute/pbs-torque/index.html b/docs/docs/compute/pbs-torque/index.html
index 23102a98e..0fa2fca29 100644
--- a/docs/docs/compute/pbs-torque/index.html
+++ b/docs/docs/compute/pbs-torque/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/compute/slurm/index.html b/docs/docs/compute/slurm/index.html
index 0db293586..a4d6d7b9b 100644
--- a/docs/docs/compute/slurm/index.html
+++ b/docs/docs/compute/slurm/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/databases/boltdb/index.html b/docs/docs/databases/boltdb/index.html
index 1ecf9aa53..61e41cae3 100644
--- a/docs/docs/databases/boltdb/index.html
+++ b/docs/docs/databases/boltdb/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/databases/datastore/index.html b/docs/docs/databases/datastore/index.html
index 93d4c9d33..fece87329 100644
--- a/docs/docs/databases/datastore/index.html
+++ b/docs/docs/databases/datastore/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/databases/dynamodb/index.html b/docs/docs/databases/dynamodb/index.html
index 0a11dc054..30c692b8d 100644
--- a/docs/docs/databases/dynamodb/index.html
+++ b/docs/docs/databases/dynamodb/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/databases/elasticsearch/index.html b/docs/docs/databases/elasticsearch/index.html
index 70dbf4f41..5e3c3dc97 100644
--- a/docs/docs/databases/elasticsearch/index.html
+++ b/docs/docs/databases/elasticsearch/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/databases/index.html b/docs/docs/databases/index.html
index 5dd04aabc..e5209e698 100644
--- a/docs/docs/databases/index.html
+++ b/docs/docs/databases/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/databases/mongodb/index.html b/docs/docs/databases/mongodb/index.html
index a5d96dddd..ec11e7ae9 100644
--- a/docs/docs/databases/mongodb/index.html
+++ b/docs/docs/databases/mongodb/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/development/developers/index.html b/docs/docs/development/developers/index.html
index 8eac58bff..606533a49 100644
--- a/docs/docs/development/developers/index.html
+++ b/docs/docs/development/developers/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/development/index.html b/docs/docs/development/index.html
index 8a30cd429..760039b97 100644
--- a/docs/docs/development/index.html
+++ b/docs/docs/development/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/events/index.html b/docs/docs/events/index.html
index 858a03e22..7a65b2861 100644
--- a/docs/docs/events/index.html
+++ b/docs/docs/events/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/events/kafka/index.html b/docs/docs/events/kafka/index.html
index 427ed9423..c7c67504e 100644
--- a/docs/docs/events/kafka/index.html
+++ b/docs/docs/events/kafka/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/index.html b/docs/docs/index.html
index 38683ccfa..29d5fc6fe 100644
--- a/docs/docs/index.html
+++ b/docs/docs/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/index.xml b/docs/docs/index.xml
index ed79415d7..40d2b9c91 100644
--- a/docs/docs/index.xml
+++ b/docs/docs/index.xml
@@ -121,6 +121,18 @@ Database: boltdb BoltDB: # Path to database file Path: ./funnel-work-dir/funnel.
       <description> Events </description>
     </item>
     
+    <item>
+      <title>FTP</title>
+      <link>https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/</link>
+      <pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate>
+      
+      <guid>https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/</guid>
+      <description>FTP Funnel supports download and uploading files via FTP.
+Currently authentication credentials are take from the URL, e.g. ftp://username:password@ftp.host.tld. This will be improved soon to allow credentials to be added to the configuration file.
+The FTP storage client is enabled by default, but may be explicitly disabled in the worker config:
+FTPStorage: Disabled: false  Example task { &amp;quot;name&amp;quot;: &amp;quot;Hello world&amp;quot;, &amp;quot;inputs&amp;quot;: [{ &amp;quot;url&amp;quot;: &amp;quot;ftp://my.ftpserver.xyz/hello.txt&amp;quot;, &amp;quot;path&amp;quot;: &amp;quot;/inputs/hello.txt&amp;quot; }, { &amp;quot;url&amp;quot;: &amp;quot;ftp://user:mypassword123@my.</description>
+    </item>
+    
     <item>
       <title>Funnel Developers</title>
       <link>https://ohsu-comp-bio.github.io/funnel/docs/development/developers/</link>
diff --git a/docs/docs/metrics/index.html b/docs/docs/metrics/index.html
index 45e2e110d..c0e535178 100644
--- a/docs/docs/metrics/index.html
+++ b/docs/docs/metrics/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/metrics/prometheus/index.html b/docs/docs/metrics/prometheus/index.html
index 248095570..576c7b052 100644
--- a/docs/docs/metrics/prometheus/index.html
+++ b/docs/docs/metrics/prometheus/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/security/basic/index.html b/docs/docs/security/basic/index.html
index 86d34cbbb..1a06cc1cf 100644
--- a/docs/docs/security/basic/index.html
+++ b/docs/docs/security/basic/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/security/index.html b/docs/docs/security/index.html
index 99fd7399b..1bd2e2406 100644
--- a/docs/docs/security/index.html
+++ b/docs/docs/security/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/storage/ftp/index.html b/docs/docs/storage/ftp/index.html
new file mode 100644
index 000000000..4f78f5304
--- /dev/null
+++ b/docs/docs/storage/ftp/index.html
@@ -0,0 +1,360 @@
+<!DOCTYPE html>
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en-us" lang="en-us">
+<head>
+  <link href="http://gmpg.org/xfn/11" rel="profile">
+  <meta http-equiv="content-type" content="text/html; charset=utf-8">
+
+  
+  <meta name="viewport" content="width=device-width, initial-scale=1.0, maximum-scale=1">
+
+  
+  <title>FTP &middot; Funnel</title>
+  
+
+  
+  <link rel="stylesheet" href="https://ohsu-comp-bio.github.io/funnel/css/poole.css">
+  <link rel="stylesheet" href="https://ohsu-comp-bio.github.io/funnel/css/darcula.css">
+  <link rel="stylesheet" href="https://ohsu-comp-bio.github.io/funnel/css/syntax.css">
+  <link rel="stylesheet" href="https://ohsu-comp-bio.github.io/funnel/css/theme.css">
+  <link rel="stylesheet" href="https://ohsu-comp-bio.github.io/funnel/css/funnel.css">
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=PT+Sans:400,400italic,700">
+
+  
+  <link rel="apple-touch-icon-precomposed" sizes="144x144" href="https://ohsu-comp-bio.github.io/funnel/apple-touch-icon-144-precomposed.png">
+  <link rel="shortcut icon" href="https://ohsu-comp-bio.github.io/funnel/favicon.png">
+
+  <script src="https://ohsu-comp-bio.github.io/funnel/js/highlight.pack.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script>
+
+</head>
+<body>
+
+  <div class="global-header">
+    <div class="global-header-container">
+      <div class="global-header-home">
+        <a href="https://ohsu-comp-bio.github.io/funnel/"><h1>Funnel</h1></a>
+      </div>
+      <ul class="global-header-nav">
+          <li><a href="https://ohsu-comp-bio.github.io/funnel/download/">Download</a></li>
+          <li><a href="https://ohsu-comp-bio.github.io/funnel/docs/">Docs</a></li>
+          <li><a href="https://github.com/ohsu-comp-bio/funnel">GitHub</a></li>
+          <li><a href="https://gitter.im/ohsu-comp-bio/funnel">Chat</a></li>
+        </ul>
+      <div class="global-header-ohsucb">
+        <a href="https://www.ohsu.edu/xd/education/schools/school-of-medicine/departments/computational-biology/"><h2>OHSU Comp Bio</h2></a>
+      </div>
+    </div>
+  </div>
+
+
+<div class="content section group">
+
+  <div class="sidebar col span_3_of_12">
+    <ul class="sidebar-nav">
+      
+      
+        
+        <li>
+          
+          <a href="https://ohsu-comp-bio.github.io/funnel/download/"
+             class="sidebar-nav-item "
+          >Download</a></li>
+          
+        
+        <li>
+          
+          <a href="https://ohsu-comp-bio.github.io/funnel/docs/"
+             class="sidebar-nav-item "
+          >Overview</a></li>
+          
+        
+        <li>
+          
+          <a href="https://ohsu-comp-bio.github.io/funnel/docs/tasks/"
+             class="sidebar-nav-item "
+          >Tasks</a></li>
+          
+        
+        <li>
+          
+          <span class="intermediate">Storage</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/local/"
+                   class="sidebar-nav-item "
+                >Local</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item  active"
+                >FTP</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/google-storage/"
+                   class="sidebar-nav-item "
+                >Google Storage</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/http/"
+                   class="sidebar-nav-item "
+                >HTTP(S)</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/swift/"
+                   class="sidebar-nav-item "
+                >OpenStack Swift</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/s3/"
+                   class="sidebar-nav-item "
+                >S3</a></li>
+            </ul>
+          </li>
+          
+          
+        
+        <li>
+          
+          <span class="intermediate">Compute</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/compute/deployment/"
+                   class="sidebar-nav-item "
+                >Deploying a cluster</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/compute/aws-batch/"
+                   class="sidebar-nav-item "
+                >AWS Batch</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/compute/grid-engine/"
+                   class="sidebar-nav-item "
+                >Grid Engine</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/compute/htcondor/"
+                   class="sidebar-nav-item "
+                >HTCondor</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/compute/pbs-torque/"
+                   class="sidebar-nav-item "
+                >PBS/Torque</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/compute/slurm/"
+                   class="sidebar-nav-item "
+                >Slurm</a></li>
+            </ul>
+          </li>
+          
+          
+        
+        <li>
+          
+          <span class="intermediate">Databases</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/databases/boltdb/"
+                   class="sidebar-nav-item "
+                >Embedded</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/databases/datastore/"
+                   class="sidebar-nav-item "
+                >Datastore</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/databases/dynamodb/"
+                   class="sidebar-nav-item "
+                >DynamoDB</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/databases/elasticsearch/"
+                   class="sidebar-nav-item "
+                >Elasticsearch</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/databases/mongodb/"
+                   class="sidebar-nav-item "
+                >MongoDB</a></li>
+            </ul>
+          </li>
+          
+          
+        
+        <li>
+          
+          <span class="intermediate">Events</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/events/kafka/"
+                   class="sidebar-nav-item "
+                >Kafka</a></li>
+            </ul>
+          </li>
+          
+          
+        
+        <li>
+          
+          <span class="intermediate">Metrics</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/metrics/prometheus/"
+                   class="sidebar-nav-item "
+                >Prometheus</a></li>
+            </ul>
+          </li>
+          
+          
+        
+        <li>
+          
+          <span class="intermediate">Security</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/security/basic/"
+                   class="sidebar-nav-item "
+                >Basic Auth</a></li>
+            </ul>
+          </li>
+          
+          
+        
+        <li>
+          
+          <span class="intermediate">Development</span></li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/development/developers/"
+                   class="sidebar-nav-item "
+                >Funnel Developers</a></li>
+            </ul>
+          </li>
+          
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://godoc.org/github.com/ohsu-comp-bio/funnel"
+                   class="sidebar-nav-item "
+                >Reference</a></li>
+            </ul>
+          </li>
+          
+          
+        
+      
+    </ul>
+  </div>
+
+  <div class="main col span_8_of_12">
+    
+
+<h1 id="ftp">FTP</h1>
+
+<p>Funnel supports download and uploading files via FTP.</p>
+
+<p>Currently authentication credentials are take from the URL, e.g. <code>ftp://username:password@ftp.host.tld</code>. This will be improved soon to allow credentials to be added to the configuration file.</p>
+
+<p>The FTP storage client is enabled by default, but may be explicitly disabled in the
+worker config:</p>
+
+<pre><code>FTPStorage:
+  Disabled: false
+</code></pre>
+
+<h3 id="example-task">Example task</h3>
+
+<pre><code>{
+  &quot;name&quot;: &quot;Hello world&quot;,
+  &quot;inputs&quot;: [{
+    &quot;url&quot;: &quot;ftp://my.ftpserver.xyz/hello.txt&quot;,
+    &quot;path&quot;: &quot;/inputs/hello.txt&quot;
+  }, {
+    &quot;url&quot;: &quot;ftp://user:mypassword123@my.ftpserver.xyz/hello.txt&quot;,
+    &quot;path&quot;: &quot;/inputs/hello.txt&quot;
+  }],
+  &quot;executors&quot;: [{
+    &quot;image&quot;: &quot;alpine&quot;,
+    &quot;command&quot;: [&quot;cat&quot;, &quot;/inputs/hello.txt&quot;],
+  }]
+}
+</code></pre>
+
+  </div>
+
+</div>
+</body>
+</html>
diff --git a/docs/docs/storage/google-storage/index.html b/docs/docs/storage/google-storage/index.html
index b258be3a6..d807d53b0 100644
--- a/docs/docs/storage/google-storage/index.html
+++ b/docs/docs/storage/google-storage/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/storage/http/index.html b/docs/docs/storage/http/index.html
index e7908e443..bba259aba 100644
--- a/docs/docs/storage/http/index.html
+++ b/docs/docs/storage/http/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/storage/index.html b/docs/docs/storage/index.html
index 54b35e871..1b8e0132e 100644
--- a/docs/docs/storage/index.html
+++ b/docs/docs/storage/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/storage/local/index.html b/docs/docs/storage/local/index.html
index d952c22c0..3d3bda169 100644
--- a/docs/docs/storage/local/index.html
+++ b/docs/docs/storage/local/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/storage/s3/index.html b/docs/docs/storage/s3/index.html
index 8451ad65d..fcb9d4963 100644
--- a/docs/docs/storage/s3/index.html
+++ b/docs/docs/storage/s3/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/storage/swift/index.html b/docs/docs/storage/swift/index.html
index 6adb33877..97ce419f2 100644
--- a/docs/docs/storage/swift/index.html
+++ b/docs/docs/storage/swift/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/docs/tasks/index.html b/docs/docs/tasks/index.html
index 3d5011076..d9a9e463d 100644
--- a/docs/docs/tasks/index.html
+++ b/docs/docs/tasks/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
diff --git a/docs/download/index.html b/docs/download/index.html
index dd2c9ecd5..046d3d0bd 100644
--- a/docs/download/index.html
+++ b/docs/download/index.html
@@ -88,6 +88,15 @@
             </ul>
           </li>
           
+          <li>
+            <ul class="sidebar-nav sidebar-nav-nested">
+              <li>
+                <a href="https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/"
+                   class="sidebar-nav-item "
+                >FTP</a></li>
+            </ul>
+          </li>
+          
           <li>
             <ul class="sidebar-nav sidebar-nav-nested">
               <li>
@@ -314,12 +323,12 @@
     
 
 
-<h3>Download 0.8.0</h3>
+<h3>Download 0.9.0</h3>
 
 
 <ul>
-  <li><a href="https://github.com/ohsu-comp-bio/funnel/releases/download/0.8.0/funnel-linux-amd64-0.8.0.tar.gz">linux</a></li>
-  <li><a href="https://github.com/ohsu-comp-bio/funnel/releases/download/0.8.0/funnel-darwin-amd64-0.8.0.tar.gz">mac</a></li>
+  <li><a href="https://github.com/ohsu-comp-bio/funnel/releases/download/0.9.0/funnel-linux-amd64-0.9.0.tar.gz">linux</a></li>
+  <li><a href="https://github.com/ohsu-comp-bio/funnel/releases/download/0.9.0/funnel-darwin-amd64-0.9.0.tar.gz">mac</a></li>
   <li><small>Windows is not supported (yet), sorry!</small></li>
 </ul>
 
diff --git a/docs/index.html b/docs/index.html
index 784e6948c..cc5a65053 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -2,7 +2,7 @@
 <!DOCTYPE html>
 <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en-us" lang="en-us">
 <head>
-	<meta name="generator" content="Hugo 0.41" />
+	<meta name="generator" content="Hugo 0.53" />
   <link href="http://gmpg.org/xfn/11" rel="profile">
   <meta http-equiv="content-type" content="text/html; charset=utf-8">
 
diff --git a/docs/index.xml b/docs/index.xml
index ca29b9d69..fc74e76c8 100644
--- a/docs/index.xml
+++ b/docs/index.xml
@@ -85,7 +85,7 @@ A node is a service which runs on each machine in a cluster. The node connects t
       <pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate>
       
       <guid>https://ohsu-comp-bio.github.io/funnel/download/</guid>
-      <description>Download 0.8.0  linux mac Windows is not supported (yet), sorry!  Funnel is a single binary.
+      <description>Download 0.9.0  linux mac Windows is not supported (yet), sorry!  Funnel is a single binary.
 Funnel requires Docker.
 Funnel is beta quality. APIs might break, bugs exist, data might be lost.
 Homebrew brew tap ohsu-comp-bio/formula brew install funnel  Build the lastest development version optional In order to build the latest code, run:
@@ -134,6 +134,18 @@ Database: boltdb BoltDB: # Path to database file Path: ./funnel-work-dir/funnel.
       <description> Events </description>
     </item>
     
+    <item>
+      <title>FTP</title>
+      <link>https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/</link>
+      <pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate>
+      
+      <guid>https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/</guid>
+      <description>FTP Funnel supports download and uploading files via FTP.
+Currently authentication credentials are take from the URL, e.g. ftp://username:password@ftp.host.tld. This will be improved soon to allow credentials to be added to the configuration file.
+The FTP storage client is enabled by default, but may be explicitly disabled in the worker config:
+FTPStorage: Disabled: false  Example task { &amp;quot;name&amp;quot;: &amp;quot;Hello world&amp;quot;, &amp;quot;inputs&amp;quot;: [{ &amp;quot;url&amp;quot;: &amp;quot;ftp://my.ftpserver.xyz/hello.txt&amp;quot;, &amp;quot;path&amp;quot;: &amp;quot;/inputs/hello.txt&amp;quot; }, { &amp;quot;url&amp;quot;: &amp;quot;ftp://user:mypassword123@my.</description>
+    </item>
+    
     <item>
       <title>Funnel Developers</title>
       <link>https://ohsu-comp-bio.github.io/funnel/docs/development/developers/</link>
diff --git a/docs/sitemap.xml b/docs/sitemap.xml
index 4d3eb12bf..5db3bb97b 100644
--- a/docs/sitemap.xml
+++ b/docs/sitemap.xml
@@ -64,6 +64,10 @@
     <loc>https://ohsu-comp-bio.github.io/funnel/docs/events/</loc>
   </url>
   
+  <url>
+    <loc>https://ohsu-comp-bio.github.io/funnel/docs/storage/ftp/</loc>
+  </url>
+  
   <url>
     <loc>https://ohsu-comp-bio.github.io/funnel/docs/development/developers/</loc>
   </url>