From f156d3eb5f21fb5a57d507779f453a709ed29e20 Mon Sep 17 00:00:00 2001 From: Sebastian Duesing Date: Thu, 28 Dec 2023 13:41:56 -0600 Subject: [PATCH] Consistency fixes --- README.md | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 21e6081a..d6996972 100644 --- a/README.md +++ b/README.md @@ -32,14 +32,15 @@ See below for a full list of files, build instructions, and instructions on usin ### Importing from a New Ontology If you wish to import terms from an ontology for which OBI does not currently have an OntoFox import file ([`src/ontology/OntoFox_inputs/`](src/ontology/OntoFox_inputs/)), follow these steps: -1. Write the import file for the new ontology (see existing import files for reference) + +1. Write the import file for the new ontology (see existing import files for reference). 2. Update [`catalog-v001.xml`](src/ontology/catalog-v001.xml) to list the new import file like it lists the existing import files. 3. Add an import statement to [`obi-edit.owl`](src/ontology/obi-edit.owl). 4. Create a blank file for the output module in [`src/ontology/OntoFox_outputs/`](src/ontology/OntoFox_outputs), e.g., to make phony output for foo.owl imports: ``` touch src/ontology/OntoFox_outputs/foo_imports.owl ``` -5. Build the module & obi.owl +5. Build the module & obi.owl. ``` make imports make obi.owl