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Treating sessions as individual subjects #319

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hpfisher3 opened this issue Mar 8, 2019 · 0 comments
Open

Treating sessions as individual subjects #319

hpfisher3 opened this issue Mar 8, 2019 · 0 comments

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@hpfisher3
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Hello,

I am running heudiconv version 0.5.2 from a singularity container. Everything runs smoothly, but I wanted to get advice about treating each session as an individual subject. We want to parse out the data this way so that fmriprep will process each session without merging T1w images. However heudiconv doesn't run if you don't pass a session id. Would you recommend doing something like this:

sub-"$subname""$sesname"/ses-"$sesname"/func ..etc.

where each session still gets treated as a unique subject, but a session folder is still created.

If you have other suggestions please let me know!

  • Harris
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