diff --git a/docs/source/projects.md b/docs/source/projects.md index 34cc6c0..ab0a52a 100644 --- a/docs/source/projects.md +++ b/docs/source/projects.md @@ -51,6 +51,19 @@ test different pipeline configurations. ::: :::: + +(projects-optophysiology)= +## Optophysiology +::::{grid} 1 1 1 1 +:::{grid-item-card} {fas}`bolt;sd-text-primary` CIMAT +:link: https://github.com/neuroinformatics-unit/CIMAT +CIMAT simplifies the analysis of multi-photon calcium imaging data by integrating algorithms from tools like Suite2p and Caiman into a modular pipeline. Researchers can evaluate, compare, and combine methods for each processing step, such as registration or source extraction, and explore metrics to identify the best fit for their datasets. + +With support for local or cluster-based parallelization, CIMAT provides visualization tools, reports, and guides to streamline decision-making and enhance reproducibility. +::: +:::: + + (projects-data-management)= ## Data Management ::::{grid} 1 1 1 1