R markdown

Where ever possible, your analyses should be documented in the form of R markdown analyses and uploaded to github.

There are some things that increase the usability of these in the future, e.g...

Add download buttons to tables

#' Interactive DT
#'
#' Generate an interactive data table with download buttons.
#'
#' @family general
#' @keywords internal
createDT <- function(DF, caption="", scrollY=400){
  data <- DT::datatable(DF, caption=caption,
                        extensions = 'Buttons',
                        options = list( dom = 'Bfrtip',
                                        buttons = c('copy', 'csv', 'excel', 'pdf', 'print'),
                                        scrollY = scrollY, scrollX=T, scrollCollapse = T, paging = F,
                                        columnDefs = list(list(className = 'dt-center', targets = "_all"))
                        )
  )
  return(data)
}

#' Interactive DT (html)
#'
#' Generate an interactive data table with download buttons.
#' Use this function when manually constructing rmarkdown chunks using cat() in a for loop.
#'
#' @family general
#' @keywords internal
createDT_html <- function(DF, caption="", scrollY=400){
  htmltools::tagList( createDT(DF, caption, scrollY))
}