From 10c8bef8f41ca3f9126ec25021220183f32c17cc Mon Sep 17 00:00:00 2001 From: Arjun Prasad Date: Tue, 29 Oct 2024 11:29:14 -0400 Subject: [PATCH] Update test_amrfinder.sh Re-enable downloading test data in `test_amrfinder.sh` --- test_amrfinder.sh | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/test_amrfinder.sh b/test_amrfinder.sh index 4463add..9a20383 100755 --- a/test_amrfinder.sh +++ b/test_amrfinder.sh @@ -11,13 +11,13 @@ else fi echo Downloading fresh test data... -# curl -s -f \ - # -O https://raw.githubusercontent.com/ncbi/amr/master/test_dna.fa \ - # -O https://raw.githubusercontent.com/ncbi/amr/master/test_prot.fa \ - # -O https://raw.githubusercontent.com/ncbi/amr/master/test_prot.gff \ - # -O https://raw.githubusercontent.com/ncbi/amr/master/test_both.expected \ - # -O https://raw.githubusercontent.com/ncbi/amr/master/test_dna.expected \ - # -O https://raw.githubusercontent.com/ncbi/amr/master/test_prot.expected +curl -s -f \ + -O https://raw.githubusercontent.com/ncbi/amr/master/test_dna.fa \ + -O https://raw.githubusercontent.com/ncbi/amr/master/test_prot.fa \ + -O https://raw.githubusercontent.com/ncbi/amr/master/test_prot.gff \ + -O https://raw.githubusercontent.com/ncbi/amr/master/test_both.expected \ + -O https://raw.githubusercontent.com/ncbi/amr/master/test_dna.expected \ + -O https://raw.githubusercontent.com/ncbi/amr/master/test_prot.expected if [ $? != 0 ] then