diff --git a/docs/source/api.rst b/docs/source/api.rst index 35fd462..c4d3d79 100644 --- a/docs/source/api.rst +++ b/docs/source/api.rst @@ -50,9 +50,9 @@ Connectivity: .. autosummary:: :toctree: generated/ - fafbseg.flywire.synapses.fetch_adjacency - fafbseg.flywire.synapses.fetch_connectivity - fafbseg.flywire.synapses.fetch_synapses + fafbseg.flywire.synapses.get_adjacency + fafbseg.flywire.synapses.get_connectivity + fafbseg.flywire.synapses.get_synapses fafbseg.flywire.synapses.synapse_counts fafbseg.flywire.synapses.predict_transmitter @@ -61,31 +61,34 @@ L2-related functions: .. autosummary:: :toctree: generated/ - fafbseg.flywire.l2_info - fafbseg.flywire.l2_graph - fafbseg.flywire.l2_dotprops - fafbseg.flywire.l2_skeleton + fafbseg.flywire.get_l2_info + fafbseg.flywire.get_l2_graph + fafbseg.flywire.get_l2_dotprops + fafbseg.flywire.get_l2_skeleton Misc: .. autosummary:: :toctree: generated/ - fafbseg.flywire.fetch_edit_history - fafbseg.flywire.fetch_leaderboard + fafbseg.flywire.get_edit_history + fafbseg.flywire.get_leaderboard fafbseg.flywire.get_neuropil_volumes fafbseg.flywire.get_lineage_graph fafbseg.flywire.get_lr_position fafbseg.flywire.get_voxels +.. _api_annotations: + For fetching annotations: .. autosummary:: :toctree: generated/ - fafbseg.flywire.search_community_annotations fafbseg.flywire.search_annotations + fafbseg.flywire.search_community_annotations fafbseg.flywire.get_hierarchical_annotations + fafbseg.flywire.NeuronCriteria For interaction with the CAVE engine: @@ -93,10 +96,10 @@ For interaction with the CAVE engine: :toctree: generated/ fafbseg.flywire.get_materialization_versions - fafbseg.flywire.create_annotation_table - fafbseg.flywire.list_annotation_tables - fafbseg.flywire.get_annotation_table_info - fafbseg.flywire.get_annotations + fafbseg.flywire.create_cave_table + fafbseg.flywire.list_cave_tables + fafbseg.flywire.get_cave_table_info + fafbseg.flywire.get_cave_table fafbseg.flywire.delete_annotations fafbseg.flywire.upload_annotations @@ -107,6 +110,7 @@ Utility functions: :toctree: generated/ fafbseg.flywire.set_default_dataset + fafbseg.flywire.set_default_annotation_version fafbseg.flywire.get_user_information