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innabel/copasi-simple-api (press backspace or delete to remove)For methods such as cGetConcentrations which return a vector, how do we know
which element corresponds to which species?
Original issue reported on code.google.com by hsa...@gmail.com on 12 Oct 2011 ...
auto-migrated
OpSys-All
Priority-High
Type-Defect
GoogleCodeExporter
- 1
- Opened on Jul 4, 2015
- #16
Hi,
I m a new user and had difficulties with the project home page (I think it is
not updated).
First the example is not available (but I found biomodels in anamotony folder).
Then, I m on Linux and ...
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- Opened on Jul 4, 2015
- #17
What steps will reproduce the problem?
1. none. I don t understand how to use that code.
2.
3.
What is the expected output? What do you see instead?
Can I write a model such as the
antimony/doc/examples/biomodels/BIOMD0000000100.txt ...
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- Opened on Jul 4, 2015
- #18
I added an example in the docs to this method:
int cSetAssignmentRule(copasi_model model, const char * species, const char *
formula);
Not sure if the example is correct, can you check. Not sure what ...
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- 1
- Opened on Jul 4, 2015
- #13
The matrices returned by the MCA calls need documentation on what the rows and
columns are.
Original issue reported on code.google.com by hsa...@gmail.com on 5 Oct 2011 at 4:54
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- Opened on Jul 4, 2015
- #14
I noted that the error messages returned by cReadSBML include both warnings and
real errors. Does Copasi distinguish between the two or must we parse the text
that is returned to determine what is a ...
auto-migrated
Priority-High
Type-Review
GoogleCodeExporter
- Opened on Jul 4, 2015
- #15
I think we should change the name of cSetBoundarySpecies to the more generic
name, cSetSpeciesType. When I saw the method name, cSetBoundarySpecies I
thought that s what it did but it will in fact also ...
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- 1
- Opened on Jul 4, 2015
- #11
The help comment on
cSetConcentration cSetConcentration(copasi_model, const char * species, double
value);
states that the argument, value can be concentration or count. What
determines what it ...
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- 1
- Opened on Jul 4, 2015
- #12
The documentation has an example for the cCreateEvent, check that the example
is correct.
Original issue reported on code.google.com by hsa...@gmail.com on 4 Oct 2011 at 11:57
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- 1
- Opened on Jul 4, 2015
- #9
There is a method called cReadAntimonyFile but no method cReadAntimonyString.
Both methods are available for SBML. For completeness
there should be a sReadAntimonyFile.
Original issue reported on code.google.com ...
auto-migrated
Priority-Medium
Type-Defect
GoogleCodeExporter
- 1
- Opened on Jul 4, 2015
- #10
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