Change Log

Need to have certain patient fields in event CSV export #276
Show links to related DDLs in event type admin #264
Migrate transactions #249
Quickly see other samples from an event #241
Warn about lost fields when changing event type #240
Allow entering patient addresses outside of Western Australia #238
Allow setting type when subdividing samples #232
Search by consent date #230
Custom fields and file attachments on consent record #229
Add links to search within a study group #228
Permit adding single patient to study group from detail page #227
Indicate required form fields with asterisks and validation messages #226
New sample IDs should start with B- and have more digits #215
Make Alias field visible on Patient and Patient edit pages #210
Show CRN, and ARK PID under Links to other databases. Remove CRN from Other section. #209
Use the term Alias instead of "Other name" #208
Use the term Middle Name instead of Second Name #207
Search box hint should say PID instead of serial number #206
Display comment on Patient page even if there is no comment #205
Don't need time of day for event #201
Allow changing event type after event is created #200
For convenience, add links to DDL admin from custom fields admin #197
MTL: Add a new SampleCultured transaction #193
Add DNA Extraction Protocol field to sample #191
Add more options for consent #189
Simplify patient sample table #188
Add ARK ID to sample #187
Make more screen space available for search results #178
Add confirmation when navigating away from dirty form #177
On patient detail screen, limit events and samples to current study #175
When moving samples, need to highlight current position #174
Add amount to sample sending transaction #168
Add more columns to sample list, fix defaults #167
Need to enter just patient ID on event search #166
Add support to backend for returning custom fields in search results #164
Showing custom fields in list #163
Rename list columns to more specific things #162
Make remove from study group button easier to find #160
In crc search, wago fields are shown as well #158
Rename Move transaction to Allocate #157
Need method for removing patient from study #153
Add submenus and paging to search autocomplete #151
Add middle name to patient detail #150
Add DOD/COD fields to search #149
Inventory Management #146
Can't tell which event biospec belongs to #145
Need more columns for event search #143
Always use E-0 ids not old IDs #140
Need sample processed, frozen/fixed date/time #138
Allow saving and recalling search queries #135
Keep current search query when navigating around #134
Preserve state of expanded/collapsed sections across navigation #130
Add locking of records to prevent simultaneous updates overwriting each other #128
Allow filtering patients by event fields and vice-versa #125
Port more frontend code to Typescript and adjust build process accordingly #124
Allow admin editing of biobank containers #123
Allow archiving of studies, hide archived studies #121
Implement admin page for studies #120
Show study member counts on home page #119
Implement patient case admin #118
Allow alphabetical grid co-ordinates in containers #117
Error handling when saving records, and notify on success #116
Implement specimen transactions #115
Show report results on front page of study #114
Add study field to event #113
Improve Filemaker migration of specimen, treatment, intervention #112
Add more fields to specimen #111
Redesign frontend layout #110
Improve appearance of login screen, add loading state and error handling #109
Add database models for Treatment and Intervention #108
Prevent chrome from remembering password, add option for remembering e-mail #106
Tell users why they were auto-logged out #105
Disassociate User model from Person #103
Add an auto-complete dropdown to search entry #101
Allow patients to be consented into new studies #99
Show more information about patient consent and make it more consistent #98
Add event ID field which isn't table pk #97
Add a URL redirect for any record ID #96
Progress bar and error handling for file uploads #95
Allow printing a series of labels by generating a PDF #93
Change label design to look like current labels #92
Script to export data from FileMaker and import into Turtleweb #90
Allow importing patient data from CSV #88
Show patient studies and cases on the detail page #87
Automatically set page size of grid based on browser window height #86
Export search results to CSV format #85
Allow selection of grid columns for display and export #84
Allow sorting of grid columns #83
Also allow attaching files to event records #81
Send system logs to logstash #79
Improve handling of errors in frontend #76
Allow restoring old versions of certain records #75
Automatically save revisions of selected database tables #74
Add logging of user login attempts #73
Add read/write access logging to database records #72
Add user management #70
Implement level-based access control #69
At login form, allow users to request help from site administrators #67
Allow users to reset their password through e-mail #66
Enable SQL explorer queries #65
Present possible duplicate patients when adding new record #64
Allow removal of patients from study groups #63
Allow attachment of files to patient record #60
Add screen for searching by event #59
Allow spaces in event fields that are short lists #58
Show inherited fields when editing event types #57
Allow ordering of event fields #55
Allow creation of new drop-down lists #53
build: Update to Python 3.4 #52
Show patient samples grouped by event #50
biobank: Allow adding multiple samples at once #49
biobank: Pick multiple sample locations when creating sample #48
Allow placement of samples in containers with co-ordinate unspecified. #47
Split sample type field into multiple fields #46
Add time field to event record #45
biobank: choose most recently used location as initial location for new samples #44
biobank: Improve buttons for adding transactions to samples #43
biobank: Add screen for viewing a sample #42
biobank: Allow searching and listing of samples #41
biobank: Improve appearance of biobank location browser #40
biobank: Initial rendering of sample labels and barcodes #39
Build and library improvements #37
Implement sample biobank module #31
Add screen for editing list of patient cases #30
When logging in, users can't know if their password was incorrect or the token sms failed to send #26
Allow setting patient "case" and filter event fields based on case #24
Add screen for defining event fields #23
Allow editing tree of event types #22
Specialize event types by study #21
Allow editing of items in drop-down lists #20
Improve look of patient grid and use it for showing study groups #19
Add hospitals database model #15
Model the different categories of gynae patient #14
Auto-logout users after 10 minutes idle #13
Allow events to be added to the patient record #12
Link to cancer registry by registry number #9
Differentiate between blank fields unknown and simply not entered #8
Don't need family fields for patients #6

Fixed bugs:

Error popup when autocompleting patient case search #289
Saving event and sample searches not working #288
Allow querying samples by event #286
Some api views almost allow unauthenticated access #285
Permission problem creating new sample #284
Sample units #283
Most recently used box doesn't work #282
Increase maximum size of search URL in nginx #281
Show empty middle name field in more places #280
Event types are cached in search autocomplete #278
Sample container grid dots are missing #277
Can't deselect show/export in columns modal when fields are duplicated #275
specimen treatment not being migrated #274
Patient alias in wrong place in event CSV export #273
Container admin is slow with non-small number of containers #272
Error navigating from event list when clicking on patient who is no longer a study member #271
Search fields appear multiple times in autocomplete #270
Migrated event types miss field definitions for location, doctor, provider, etc #269
Event doctor and location are migrated as row ids #268
Patient UMRN, CRN, etc, aren't searchable #267
Searching custom fields which are dates doesn't work #266
Frontend special case for dd/mm/yyyy values in custom field dates #265
Event field ordering not updated after admin #263
Don't show archived studies in event type admin #262
Migration of test results doesn't use DDLs #261
improve migration of "tes" onto people_person #260
some patients have deceased False but have a date of death #259
make box layout diagram more legible #258
DDL drop downs have vanished for some event types #257
"inv" migration bringing across nonsense container #256
"Created" should read "Collected" on the sample list screen #255
displaying an event column with multiple definitions displays multiple columns #254
consent modal shows thumbs down for a consented patient #253
have_path_report not migrating #252
Dropdowns sometimes blank when there is a value #251
API queries limited to 1000 rows #250
Event fields should be created on parent event type if shared by two or more child event types #248
migration CSV load failing after study cleanup #247
Change consent status to a drop-down list #246
Don't migrate epi_ fields from "epi" #245
Search auto-completion of related keywords stopped working #244
Search auto-complete: don't submenu event type fields once a keyword has been partially typed #243
Allow substring search for "short list of possibilities" custom fields #242
Clean up code for loading/saving the edit patient screen #239
Consent status tick boxes #237
CRN and Cancer Research Number are the same field #236
Bombs when creating new patient without address #235
Event list columns modal is slow to load #234
Grid makes 3 queries while the page is loading #233
When creating multiple samples at once, processed/frozen/fixed dates aren't set #231
Biobank exported CSV headings don't match fields #225
Custom field admin is slow with large number of fields #224
Large number of event fields bogs down search column selection #223
DNA extraction protocol missing from migration #222
Unable to move boxes in container admin #221
Bad migration of valuelist type custom fields #220
show biobank sample comment #219
Transaction editing / deletion #218
Don't allow patient deletion if pending events / samples #217
Subdividing a subdivided sample causes dangling sample reference #216
Rename SampleCreated transaction to SampleCollected #214
Samples being migrated and set with a location of 2mL tube #213
When you delete a saved search you get an error pop up but it still deletes. #212
Show CPDB (Cameron's DB ID) under Links to other databases #211
Sample subdivision/subculture: list of split parts incorrect #204
Always show all fields on samples #203
Biospecimen migration - comment missing, wrong transaction types, processed date made up #202
Deselect all studies in event type admin does nothing #199
After migration samples and events get IDs starting with 9 #198
JS traceback in sample editor (creating sample) #196
error thrown on sample creation #192
Study delete button doesn't delete #190
Wrong patient ID in possible duplicates list #186
Times migrated into UTC not WST #185
event editor should show inherited fields #184
Migration should fill in the 'fields' definition for all events.EventType objects #183
Add event dropdown button descends past page end #182
On patient detail screen, all events for study are shown on patient #181
Search autocomplete should prompt for items using __icontains instead of __istartswith #180
Fix studygroup_id, study_member_id, list_id and study_id NULL in migration #179
Container list gets in the way in biobank search #176
Boxes and buttons in study admin are all squashed up #173
Make admin study add button easier to find #172
Study list is limited to 20 #171
Incorrect migration of patient deceased status #170
Can't add new event type in admin when there are no event types #169
Patient duplicate search stopped working #165
Group CSV export column select is only ID initially #161
Current patient search query pollutes study groups search #159
Error when saving report #156
Report buttons have no labels #155
Event id doesn't appear in exported csv columns #154
Fix test field names in migration #152
Set the pk counter to match the highest patient ID #148
Change patient ID template to have 6 digits #147
Click on biospecimen and "loading" gets stuck #144
Can't choose fields to display on search results #142
Said 57 results but only exported 21 #141
DNA has units pcs #139
Imported blank date fields as 1/1/1970 #137
After auto-logout, need to click login button twice #136
Sample edit form was saying decimal numbers were invalid #133
Correct initial container selection when making sample move transaction #132
Fix race error when updatimg user prefs for the first time #131
Fix problem where no previous versions of objects were shown #129
Allow authenticated download of file attachments from production server #127
Fix display of dates in wrong timezone #126
Better query filtering for user and sample #122
Improve token auth SMS #107
Misc bug fixes F12 #104
Make Django database migrations run quicker #102
Incorrect age was shown on patient detail page #100
Restoring revisions with dob/dod caused error #94
Search stopped working #91
Assorted minor bug fixes #89
No event fields visible if patient doesn't have a case set #82
Field ordering gets reset to alphabetical when editing event type #80
Show username on file uploads #78
Stale CSRF token cookies causing problems saving records #77
Fix problem with session idle timeout when app is open in multiple tabs #71
Fix admin site login form #68
Improve appearance of study group patient list #62
Allow searching on custom event fields #61
Allow multiple event types to have the same name #54
List of fields incorrect when patient has multiple cases #51
Search returns no results when query syntax is slightly wrong #38
Prevent cascading deletes of patient records #36
Assorted bug fixes #35
Date ranges getting munged when using expanded query form #34
List of drop-down lists in admin is slow to load #33
Biobank container list is really slow to load #32
Control for setting a title/salutation on patient doesn't work #29
When editing DDLs, blank items get removed #28
Need to show a message while saving things #27
Site auto-logs-out after 1 minute on Firefox #25
Problems with search query date ranges and search form and reports #18
Site won't work if users don't refresh/clear browser cache #17
Clicking Biobank button crashes the app #16
Make patient address entry work better and fix display of addresses #11
Add patient cause of death field #7
Change wording of study, etc #5
Disable browser auto-fill on patient form, etc #4
Patient list: show DOB in correct format #3
Can't create studies/reports after logging in #2
Make login e-mail case-insensitive #1

Closed issues:

No authentication on static uploads #293
WAGO Data Import Script #291
Placeholder 195 #195
Placeholder 194 #194

* This Change Log was automatically generated by github_changelog_generator

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CHANGELOG.md

CHANGELOG.md

Change Log

Unreleased

turtle-0.54.0 (2016-10-12)

turtle-0.53.0 (2016-10-06)

turtle-0.52.0 (2016-09-22)

turtle-0.51.2 (2016-09-07)

turtle-0.51.1 (2016-09-01)

turtle-0.51.0 (2016-09-01)

turtle-0.49.2 (2016-09-01)

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Change Log

Unreleased

turtle-0.54.0 (2016-10-12)

turtle-0.53.0 (2016-10-06)

turtle-0.52.0 (2016-09-22)

turtle-0.51.2 (2016-09-07)

turtle-0.51.1 (2016-09-01)

turtle-0.51.0 (2016-09-01)

turtle-0.49.2 (2016-09-01)