Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

use .bed file for IGV report sites #45

Open
stevekm opened this issue Mar 15, 2021 · 1 comment
Open

use .bed file for IGV report sites #45

stevekm opened this issue Mar 15, 2021 · 1 comment
Labels
low priority revisit this later non-critical, non-breaking change to consider

Comments

@stevekm
Copy link
Member

stevekm commented Mar 15, 2021

Right now the CWL for IGV reports has a tabix indexed .vcf.gz file input, need to see if that can be just a bed file
@stevekm
Copy link
Member Author

stevekm commented Mar 18, 2021

until this is implemented, will have to convert maf to vcf.gz with tabix index

@svural svural added the revisit this later non-critical, non-breaking change to consider label May 31, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
low priority revisit this later non-critical, non-breaking change to consider
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@svural @stevekm