From ab25d8f88cdaa42d7dde2ac5c9d79f04a92779bb Mon Sep 17 00:00:00 2001
From: Merit Kayastha <90002479+mkayasth@users.noreply.github.com>
Date: Mon, 6 May 2024 10:20:30 -0400
Subject: [PATCH] Update geneAnalysis.py

---
 geneAnalysis/geneAnalysis.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/geneAnalysis/geneAnalysis.py b/geneAnalysis/geneAnalysis.py
index 56398e0..fecfdbb 100644
--- a/geneAnalysis/geneAnalysis.py
+++ b/geneAnalysis/geneAnalysis.py
@@ -8,7 +8,7 @@
 
 # check if a reference genome is provided as a command-line argument.
 if len(sys.argv) < 2:
-    print("Usage: python3.11 geneAnalysis.py <reference_genome>")
+    print("Usage: python3 geneAnalysis.py <reference_genome>")
     sys.exit(1)
 
 # get the reference genome from the command-line argument.
@@ -27,7 +27,7 @@
 
 # function to run a Python script with additional arguments, if needed.
 def run_script(script_path, *args):
-    subprocess.run(['python3.11', script_path, *args], check=True)
+    subprocess.run(['python3', script_path, *args], check=True)
 
 # Calculate the average mutation rate (for a protein ~~ by comparing all with reference strain).
 def calculate_average_mutation_rate(csv_file): # avg of all strains compared to the reference genome from mutation_rates.csv.