Installation via pip fails

[JustinGibbons]

I am attempting to install boilerpipe on a machine running Ubuntu 12.04 via pip install boilerpipe.

I get the following output:

Downloading/unpacking boilerpipe
Downloading boilerpipe-1.2.0.0.tar.gz (1.3MB): 1.3MB downloaded
Running setup.py egg_info for package boilerpipe

Downloading/unpacking JPype1 (from boilerpipe)
Downloading JPype1-0.5.5.2.tar.gz (143kB): 143kB downloaded
Running setup.py egg_info for package JPype1

Downloading/unpacking charade (from boilerpipe)
Downloading charade-1.0.3.tar.gz (168kB): 168kB downloaded
Running setup.py egg_info for package charade

Installing collected packages: boilerpipe, JPype1, charade
Running setup.py install for boilerpipe

Running setup.py install for JPype1
building '_jpype' extension
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -Isrc/native/common/include -Isrc/native/python/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include/linux -I/usr/include/python2.7 -c src/native/common/jp_platform_win32.cpp -o build/temp.linux-i686-2.7/src/native/common/jp_platform_win32.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -Isrc/native/common/include -Isrc/native/python/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include/linux -I/usr/include/python2.7 -c src/native/common/jp_referencequeue.cpp -o build/temp.linux-i686-2.7/src/native/common/jp_referencequeue.o
In file included from src/native/common/include/jpype.h:80:0,
from src/native/common/jp_referencequeue.cpp:1:
src/native/common/include/jp_utility.h:20:17: fatal error: jni.h: No such file or directory
compilation terminated.
error: command 'gcc' failed with exit status 1
Complete output from command /usr/bin/python -c "import setuptools;file='/tmp/pip_build_root/JPype1/setup.py';exec(compile(open(file).read().replace('\r\n', '\n'), file, 'exec'))" install --record /tmp/pip-mJBmAB-record/install-record.txt --single-version-externally-managed:
running install

running build

running build_py

creating build

creating build/lib.linux-i686-2.7

creating build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_gui.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jexception.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jpackage.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_pykeywords.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_darwin.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_core.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jobject.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jclass.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jarray.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jproxy.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jcollection.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_linux.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/JClassUtil.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/nio.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_properties.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_jwrapper.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/findjvm.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_windows.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/reflect.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/init.py -> build/lib.linux-i686-2.7/jpype

copying src/python/jpype/_refdaemon.py -> build/lib.linux-i686-2.7/jpype

creating build/lib.linux-i686-2.7/jpype/awt

copying src/python/jpype/awt/init.py -> build/lib.linux-i686-2.7/jpype/awt

creating build/lib.linux-i686-2.7/jpype/awt/event

copying src/python/jpype/awt/event/WindowAdapter.py -> build/lib.linux-i686-2.7/jpype/awt/event

copying src/python/jpype/awt/event/init.py -> build/lib.linux-i686-2.7/jpype/awt/event

creating build/lib.linux-i686-2.7/jpypex

copying src/python/jpypex/init.py -> build/lib.linux-i686-2.7/jpypex

creating build/lib.linux-i686-2.7/jpypex/swing

copying src/python/jpypex/swing/AbstractAction.py -> build/lib.linux-i686-2.7/jpypex/swing

copying src/python/jpypex/swing/pyutils.py -> build/lib.linux-i686-2.7/jpypex/swing

copying src/python/jpypex/swing/init.py -> build/lib.linux-i686-2.7/jpypex/swing

running build_ext

building '_jpype' extension

creating build/temp.linux-i686-2.7

creating build/temp.linux-i686-2.7/src

creating build/temp.linux-i686-2.7/src/native

creating build/temp.linux-i686-2.7/src/native/common

creating build/temp.linux-i686-2.7/src/native/python

gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -Isrc/native/common/include -Isrc/native/python/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include/linux -I/usr/include/python2.7 -c src/native/common/jp_platform_win32.cpp -o build/temp.linux-i686-2.7/src/native/common/jp_platform_win32.o

gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -Isrc/native/common/include -Isrc/native/python/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include -I/usr/lib/jvm/java-1.7.0-openjdk-i386/include/linux -I/usr/include/python2.7 -c src/native/common/jp_referencequeue.cpp -o build/temp.linux-i686-2.7/src/native/common/jp_referencequeue.o

In file included from src/native/common/include/jpype.h:80:0,

             from src/native/common/jp_referencequeue.cpp:1:

src/native/common/include/jp_utility.h:20:17: fatal error: jni.h: No such file or directory

compilation terminated.

error: command 'gcc' failed with exit status 1

---

Cleaning up...
Command /usr/bin/python -c "import setuptools;file='/tmp/pip_build_root/JPype1/setup.py';exec(compile(open(file).read().replace('\r\n', '\n'), file, 'exec'))" install --record /tmp/pip-mJBmAB-record/install-record.txt --single-version-externally-managed failed with error code 1 in /tmp/pip_build_root/JPype1
Storing complete log in /home/justin/.pip/pip.log

The problem seems to be that it is following this hard-coded path:

src/native/common/include

My JAVA_HOME is pointing to /usr/lib/jvm/java-1.7.0-openjdk-i386

Any help is appreciated.

Thank you

[tuxdna]

@JustinGibbons This seems like a JPype1 installation issue. Could you try a pre-built python-jpype1 package avaiable in Ubuntu ?

[tuxdna]

@JustinGibbons You could also try suggestions mentioned here - #6