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output file not found #181

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Anysdn opened this issue Jun 20, 2024 · 0 comments
Open

output file not found #181

Anysdn opened this issue Jun 20, 2024 · 0 comments

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@Anysdn
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Anysdn commented Jun 20, 2024

Hello,
I am using RagTag in a Snakemake pipeline, but when running the RagTag_scaffold option, I get the following error: "Error: Scaffolded assembly file not found." It fails to generate the expected output file. It only generates these three files: ragtag.scaffold.asm.paf.log, ragtag.scaffold.err, and ragtag.scaffold.asm.paf. Do you have any idea what might be causing this issue?

Thank you for your help

@Anysdn Anysdn changed the title Erreur fichier de sortie attendu non genéré outpu file not found Jun 20, 2024
@Anysdn Anysdn changed the title outpu file not found output file not found Jun 20, 2024
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