From dcefffcf050bb4bbd201c08df0f33c2ae01f9f70 Mon Sep 17 00:00:00 2001 From: Quang Trinh Date: Thu, 14 Mar 2013 14:43:41 -0400 Subject: [PATCH] updated from files data.modencode.org --- DATA_SNAPSHOTS.txt.1.March.2012 | 16 + DATA_SNAPSHOTS.txt.16.December.2012 | 16 + DATA_SNAPSHOTS.txt.7.December.2012 | 28 + htdocs/DATA_SNAPSHOTS.txt | 1 + htdocs/modencode-cloud.html | 4 +- htdocs/modencode.js | 11440 ++++++-- htdocs/publications | 1 - perl/lib/perl/5.10.1/auto/VM-EC2/.packlist | 78 + perl/man/man3/VM::EC2.3pm | 2555 ++ perl/man/man3/VM::EC2::AvailabilityZone.3pm | 180 + perl/man/man3/VM::EC2::BlockDevice.3pm | 214 + .../man3/VM::EC2::BlockDevice::Attachment.3pm | 227 + perl/man/man3/VM::EC2::BlockDevice::EBS.3pm | 195 + .../man3/VM::EC2::BlockDevice::Mapping.3pm | 220 + .../VM::EC2::BlockDevice::Mapping::EBS.3pm | 216 + perl/man/man3/VM::EC2::Dispatch.3pm | 370 + perl/man/man3/VM::EC2::ElasticAddress.3pm | 201 + perl/man/man3/VM::EC2::Error.3pm | 180 + perl/man/man3/VM::EC2::Generic.3pm | 377 + perl/man/man3/VM::EC2::Group.3pm | 195 + perl/man/man3/VM::EC2::Image.3pm | 347 + .../man3/VM::EC2::Image::LaunchPermission.3pm | 179 + perl/man/man3/VM::EC2::Instance.3pm | 531 + .../man3/VM::EC2::Instance::ConsoleOutput.3pm | 187 + perl/man/man3/VM::EC2::Instance::Metadata.3pm | 355 + .../VM::EC2::Instance::MonitoringState.3pm | 191 + .../man3/VM::EC2::Instance::PasswordData.3pm | 180 + .../man/man3/VM::EC2::Instance::Placement.3pm | 173 + perl/man/man3/VM::EC2::Instance::Set.3pm | 179 + perl/man/man3/VM::EC2::Instance::State.3pm | 191 + .../man3/VM::EC2::Instance::State::Reason.3pm | 207 + perl/man/man3/VM::EC2::KeyPair.3pm | 187 + perl/man/man3/VM::EC2::Region.3pm | 181 + perl/man/man3/VM::EC2::ReservationSet.3pm | 177 + perl/man/man3/VM::EC2::ReservedInstance.3pm | 232 + .../VM::EC2::ReservedInstance::Offering.3pm | 214 + perl/man/man3/VM::EC2::SecurityGroup.3pm | 350 + ...M::EC2::SecurityGroup::GroupPermission.3pm | 213 + .../VM::EC2::SecurityGroup::IpPermission.3pm | 242 + perl/man/man3/VM::EC2::Snapshot.3pm | 345 + ...:EC2::Snapshot::CreateVolumePermission.3pm | 179 + .../VM::EC2::Spot::DatafeedSubscription.3pm | 178 + .../man3/VM::EC2::Spot::InstanceRequest.3pm | 226 + perl/man/man3/VM::EC2::Spot::PriceHistory.3pm | 184 + perl/man/man3/VM::EC2::Tag.3pm | 187 + perl/man/man3/VM::EC2::Volume.3pm | 304 + perl/share/perl/5.10.1/VM/EC2.pm | 3643 +++ .../perl/5.10.1/VM/EC2/AvailabilityZone.pm | 80 + perl/share/perl/5.10.1/VM/EC2/BlockDevice.pm | 120 + .../5.10.1/VM/EC2/BlockDevice/Attachment.pm | 168 + .../perl/5.10.1/VM/EC2/BlockDevice/EBS.pm | 87 + .../perl/5.10.1/VM/EC2/BlockDevice/Mapping.pm | 136 + .../5.10.1/VM/EC2/BlockDevice/Mapping/EBS.pm | 114 + perl/share/perl/5.10.1/VM/EC2/Dispatch.pm | 450 + .../perl/5.10.1/VM/EC2/ElasticAddress.pm | 110 + perl/share/perl/5.10.1/VM/EC2/Error.pm | 81 + perl/share/perl/5.10.1/VM/EC2/Generic.pm | 462 + perl/share/perl/5.10.1/VM/EC2/Group.pm | 92 + perl/share/perl/5.10.1/VM/EC2/Image.pm | 320 + .../5.10.1/VM/EC2/Image/LaunchPermission.pm | 67 + perl/share/perl/5.10.1/VM/EC2/Instance.pm | 763 + .../5.10.1/VM/EC2/Instance/ConsoleOutput.pm | 85 + .../perl/5.10.1/VM/EC2/Instance/Metadata.pm | 331 + .../5.10.1/VM/EC2/Instance/MonitoringState.pm | 95 + .../5.10.1/VM/EC2/Instance/PasswordData.pm | 70 + .../perl/5.10.1/VM/EC2/Instance/Placement.pm | 63 + perl/share/perl/5.10.1/VM/EC2/Instance/Set.pm | 88 + .../perl/5.10.1/VM/EC2/Instance/State.pm | 88 + .../5.10.1/VM/EC2/Instance/State/Change.pm | 30 + .../5.10.1/VM/EC2/Instance/State/Reason.pm | 98 + perl/share/perl/5.10.1/VM/EC2/KeyPair.pm | 79 + perl/share/perl/5.10.1/VM/EC2/Region.pm | 77 + .../perl/5.10.1/VM/EC2/ReservationSet.pm | 67 + .../perl/5.10.1/VM/EC2/ReservedInstance.pm | 138 + .../VM/EC2/ReservedInstance/Offering.pm | 113 + .../share/perl/5.10.1/VM/EC2/SecurityGroup.pm | 394 + .../VM/EC2/SecurityGroup/GroupPermission.pm | 132 + .../VM/EC2/SecurityGroup/IpPermission.pm | 163 + perl/share/perl/5.10.1/VM/EC2/Snapshot.pm | 336 + .../VM/EC2/Snapshot/CreateVolumePermission.pm | 61 + .../VM/EC2/Spot/DatafeedSubscription.pm | 67 + .../5.10.1/VM/EC2/Spot/InstanceRequest.pm | 150 + .../5.10.1/VM/EC2/Spot/LaunchSpecification.pm | 33 + .../perl/5.10.1/VM/EC2/Spot/PriceHistory.pm | 69 + perl/share/perl/5.10.1/VM/EC2/Tag.pm | 80 + perl/share/perl/5.10.1/VM/EC2/Volume.pm | 258 + release/metadata_fixed.csv | 10300 ++++--- release/metadata_mirror.csv | 23023 +++++++++------- release/spreadsheet.csv.16.December.2012 | 12229 ++++++++ 89 files changed, 60869 insertions(+), 17374 deletions(-) create mode 100644 DATA_SNAPSHOTS.txt.1.March.2012 create mode 100644 DATA_SNAPSHOTS.txt.16.December.2012 create mode 100644 DATA_SNAPSHOTS.txt.7.December.2012 create mode 120000 htdocs/DATA_SNAPSHOTS.txt delete mode 120000 htdocs/publications create mode 100644 perl/lib/perl/5.10.1/auto/VM-EC2/.packlist create mode 100644 perl/man/man3/VM::EC2.3pm create mode 100644 perl/man/man3/VM::EC2::AvailabilityZone.3pm create mode 100644 perl/man/man3/VM::EC2::BlockDevice.3pm create mode 100644 perl/man/man3/VM::EC2::BlockDevice::Attachment.3pm create mode 100644 perl/man/man3/VM::EC2::BlockDevice::EBS.3pm create mode 100644 perl/man/man3/VM::EC2::BlockDevice::Mapping.3pm create mode 100644 perl/man/man3/VM::EC2::BlockDevice::Mapping::EBS.3pm create mode 100644 perl/man/man3/VM::EC2::Dispatch.3pm create mode 100644 perl/man/man3/VM::EC2::ElasticAddress.3pm create mode 100644 perl/man/man3/VM::EC2::Error.3pm create mode 100644 perl/man/man3/VM::EC2::Generic.3pm create mode 100644 perl/man/man3/VM::EC2::Group.3pm create mode 100644 perl/man/man3/VM::EC2::Image.3pm create mode 100644 perl/man/man3/VM::EC2::Image::LaunchPermission.3pm create mode 100644 perl/man/man3/VM::EC2::Instance.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::ConsoleOutput.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::Metadata.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::MonitoringState.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::PasswordData.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::Placement.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::Set.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::State.3pm create mode 100644 perl/man/man3/VM::EC2::Instance::State::Reason.3pm create mode 100644 perl/man/man3/VM::EC2::KeyPair.3pm create mode 100644 perl/man/man3/VM::EC2::Region.3pm create mode 100644 perl/man/man3/VM::EC2::ReservationSet.3pm create mode 100644 perl/man/man3/VM::EC2::ReservedInstance.3pm create mode 100644 perl/man/man3/VM::EC2::ReservedInstance::Offering.3pm create mode 100644 perl/man/man3/VM::EC2::SecurityGroup.3pm create mode 100644 perl/man/man3/VM::EC2::SecurityGroup::GroupPermission.3pm create mode 100644 perl/man/man3/VM::EC2::SecurityGroup::IpPermission.3pm create mode 100644 perl/man/man3/VM::EC2::Snapshot.3pm create mode 100644 perl/man/man3/VM::EC2::Snapshot::CreateVolumePermission.3pm create mode 100644 perl/man/man3/VM::EC2::Spot::DatafeedSubscription.3pm create mode 100644 perl/man/man3/VM::EC2::Spot::InstanceRequest.3pm create mode 100644 perl/man/man3/VM::EC2::Spot::PriceHistory.3pm create mode 100644 perl/man/man3/VM::EC2::Tag.3pm create mode 100644 perl/man/man3/VM::EC2::Volume.3pm create mode 100644 perl/share/perl/5.10.1/VM/EC2.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/AvailabilityZone.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/BlockDevice.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/BlockDevice/Attachment.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/BlockDevice/EBS.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping/EBS.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Dispatch.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/ElasticAddress.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Error.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Generic.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Group.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Image.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Image/LaunchPermission.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/ConsoleOutput.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/Metadata.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/MonitoringState.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/PasswordData.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/Placement.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/Set.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/State.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/State/Change.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Instance/State/Reason.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/KeyPair.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Region.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/ReservationSet.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/ReservedInstance.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/ReservedInstance/Offering.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/SecurityGroup.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/SecurityGroup/GroupPermission.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/SecurityGroup/IpPermission.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Snapshot.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Snapshot/CreateVolumePermission.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Spot/DatafeedSubscription.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Spot/InstanceRequest.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Spot/LaunchSpecification.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Spot/PriceHistory.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Tag.pm create mode 100644 perl/share/perl/5.10.1/VM/EC2/Volume.pm create mode 100644 release/spreadsheet.csv.16.December.2012 diff --git a/DATA_SNAPSHOTS.txt.1.March.2012 b/DATA_SNAPSHOTS.txt.1.March.2012 new file mode 100644 index 0000000..31dcce8 --- /dev/null +++ b/DATA_SNAPSHOTS.txt.1.March.2012 @@ -0,0 +1,16 @@ +snap-00b2057f modENCODE D. virilis raw data, part 1 (1 March 2012) +snap-0a39f675 modENCODE D. melanogaster signal data, part 1 (1 March 2012) +snap-2627f759 modENCODE C. elegans raw data, part 1 (1 March 2012) +snap-26ad5959 modENCODE D. melanogaster raw data, part 1 (1 March 2012) +snap-462e8139 modENCODE C. elegans interpreted data, part 1 (1 March 2012) +snap-4ca66e33 modENCODE C. elegans signal data, part 1 (1 March 2012) +snap-509b352f modENCODE D. mojavensis signal data, part 1 (1 March 2012) +snap-76e92f09 modENCODE D. melanogaster interpreted data, part 1 (1 March 2012) +snap-868a3df9 modENCODE D. simulans raw data, part 1 (1 March 2012) +snap-a8d678d7 modENCODE D. mojavensis raw data, part 1 (1 March 2012) +snap-aa369ed5 modENCODE D. pseudoobscura raw data, part 1 (1 March 2012) +snap-cab019b5 modENCODE D. pseudoobscura signal data, part 1 (1 March 2012) +snap-d0c818af modENCODE D. melanogaster raw data, part 3 (1 March 2012) +snap-de2887a1 modENCODE D. ananassae raw data, part 1 (1 March 2012) +snap-e80bbc97 modENCODE D. yakuba raw data, part 1 (1 March 2012) +snap-fe52a081 modENCODE D. melanogaster raw data, part 2 (1 March 2012) diff --git a/DATA_SNAPSHOTS.txt.16.December.2012 b/DATA_SNAPSHOTS.txt.16.December.2012 new file mode 100644 index 0000000..31dcce8 --- /dev/null +++ b/DATA_SNAPSHOTS.txt.16.December.2012 @@ -0,0 +1,16 @@ +snap-00b2057f modENCODE D. virilis raw data, part 1 (1 March 2012) +snap-0a39f675 modENCODE D. melanogaster signal data, part 1 (1 March 2012) +snap-2627f759 modENCODE C. elegans raw data, part 1 (1 March 2012) +snap-26ad5959 modENCODE D. melanogaster raw data, part 1 (1 March 2012) +snap-462e8139 modENCODE C. elegans interpreted data, part 1 (1 March 2012) +snap-4ca66e33 modENCODE C. elegans signal data, part 1 (1 March 2012) +snap-509b352f modENCODE D. mojavensis signal data, part 1 (1 March 2012) +snap-76e92f09 modENCODE D. melanogaster interpreted data, part 1 (1 March 2012) +snap-868a3df9 modENCODE D. simulans raw data, part 1 (1 March 2012) +snap-a8d678d7 modENCODE D. mojavensis raw data, part 1 (1 March 2012) +snap-aa369ed5 modENCODE D. pseudoobscura raw data, part 1 (1 March 2012) +snap-cab019b5 modENCODE D. pseudoobscura signal data, part 1 (1 March 2012) +snap-d0c818af modENCODE D. melanogaster raw data, part 3 (1 March 2012) +snap-de2887a1 modENCODE D. ananassae raw data, part 1 (1 March 2012) +snap-e80bbc97 modENCODE D. yakuba raw data, part 1 (1 March 2012) +snap-fe52a081 modENCODE D. melanogaster raw data, part 2 (1 March 2012) diff --git a/DATA_SNAPSHOTS.txt.7.December.2012 b/DATA_SNAPSHOTS.txt.7.December.2012 new file mode 100644 index 0000000..0aae0d7 --- /dev/null +++ b/DATA_SNAPSHOTS.txt.7.December.2012 @@ -0,0 +1,28 @@ +#snap-69214f0c modENCODE C. elegans interpreted data, part 1 (5 September 2011) +snap-8f6034ea modENCODE C. elegans interpreted data, part 1 (5 September 2011) +#snap-c58ffba0 modENCODE C. elegans interpreted data, part 2 (7 December 2011) +snap-33623656 modENCODE C. elegans interpreted data, part 2 (7 December 2011) +snap-79214f1c modENCODE C. elegans raw data, part 1 (5 September 2011) +snap-7d214f18 modENCODE C. elegans raw data, part 2 (5 September 2011) +snap-7f214f1a modENCODE C. elegans raw data, part 3 (5 September 2011) +snap-c78ffba2 modENCODE C. elegans raw data, part 4 (7 December 2011) +snap-57214f32 modENCODE C. elegans signal data, part 1 (5 September 2011) +snap-f78ffb92 modENCODE C. elegans signal data, part 2 (7 December 2011) +snap-75214f10 modENCODE D. ananassae raw data, part 1 (5 September 2011) +snap-63214f06 modENCODE D. melanogaster interpreted data, part 1 (5 September 2011) +snap-ff8ffb9a modENCODE D. melanogaster interpreted data, part 2 (7 December 2011) +snap-4b214f2e modENCODE D. melanogaster raw data, part 1 (5 September 2011) +snap-9f204efa modENCODE D. melanogaster raw data, part 2 (5 September 2011) +snap-f98ffb9c modENCODE D. melanogaster raw data, part 3 (7 December 2011) +snap-b9204edc modENCODE D. melanogaster signal data, part 1 (5 September 2011) +snap-8d204ee8 modENCODE D. melanogaster signal data, part 2 (5 September 2011) +snap-f58ffb90 modENCODE D. melanogaster signal data, part 3 (7 December 2011) +snap-61214f04 modENCODE D. mojavensis raw data, part 1 (5 September 2011) +snap-8b204eee modENCODE D. mojavensis signal data, part 1 (5 September 2011) +snap-85204ee0 modENCODE D. pseudoobscura raw data, part 1 (5 September 2011) +snap-fd8ffb98 modENCODE D. pseudoobscura raw data, part 2 (7 December 2011) +snap-65214f00 modENCODE D. pseudoobscura signal data, part 1 (5 September 2011) +snap-ad204ec8 modENCODE D. simulans raw data, part 1 (5 September 2011) +snap-adb820c8 modENCODE D. simulans raw data, part 2 (7 December 2011) +snap-89204eec modENCODE D. virilis raw data, part 1 (5 September 2011) +snap-45214f20 modENCODE D. yakuba raw data, part 1 (5 September 2011) diff --git a/htdocs/DATA_SNAPSHOTS.txt b/htdocs/DATA_SNAPSHOTS.txt new file mode 120000 index 0000000..ec3c0ed --- /dev/null +++ b/htdocs/DATA_SNAPSHOTS.txt @@ -0,0 +1 @@ +../DATA_SNAPSHOTS.txt \ No newline at end of file diff --git a/htdocs/modencode-cloud.html b/htdocs/modencode-cloud.html index 08bd5a4..97df17d 100644 --- a/htdocs/modencode-cloud.html +++ b/htdocs/modencode-cloud.html @@ -17,7 +17,7 @@

Latest modENCODE Public AMIami-edeb4384 Latest modENCODE Genome Browser AMIami-dee738b7 -Latest modENCODE Public Data Snapshotsnap-e690aa97 +Latest modENCODE Public Data Snapshotsnap-7eada40f

@@ -277,7 +277,7 @@

Attaching the modENCODE Data Root to the Instance of your Choice

  • Once the instance is up and running, create a volume from the modENCODE root snapshot. With the Amazon Console or tool of your choice, locate public - snapshot snap-e690aa97. + snapshot snap-7eada40f. Be sure to place your volume in the same availability zone as the instance created in the previous step. The root snapshot is small (1 GB) and the volume will be ready to use almost instantly. diff --git a/htdocs/modencode.js b/htdocs/modencode.js index f7fd8ac..e62a778 100644 --- a/htdocs/modencode.js +++ b/htdocs/modencode.js @@ -134,7 +134,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -149,7 +149,7 @@ ], "Cell-Line" : "1182-4H", "submission" : "40", - "label" : "total-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;1182-4H;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -173,14 +173,14 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_POL2/8WG16_N2_MXEMB" ], "submission" : "44", - "label" : "pol2;Mixed Embryos;20 degree celsius;ChIP-chip", + "label" : "RNA polymerase II;Mixed Embryos;20 degree celsius;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -189,7 +189,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "ventral prothoracic disc", + "Tissue" : "Ventral prothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -204,7 +204,7 @@ ], "Cell-Line" : "CME-L1", "submission" : "48", - "label" : "total-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-tiling-array", + "label" : "total-RNA;CME-L1;Larvae 3rd instar;Ventral prothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -212,7 +212,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -227,7 +227,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "49", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -235,7 +235,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -250,7 +250,7 @@ ], "Cell-Line" : "GM2", "submission" : "50", - "label" : "total-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;GM2;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -258,7 +258,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -273,7 +273,7 @@ ], "Cell-Line" : "Kc167", "submission" : "51", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -327,7 +327,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "eye-antenna disc-derived cell-line", + "Tissue" : "Eye-antenna disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -342,7 +342,7 @@ ], "Cell-Line" : "ML-DmD11", "submission" : "54", - "label" : "total-RNA;ML-DmD11;Larvae 3rd instar;eye-antenna disc-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;ML-DmD11;Larvae 3rd instar;Eye-antenna disc-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -350,7 +350,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -365,7 +365,7 @@ ], "Cell-Line" : "ML-DmD17-c3", "submission" : "55", - "label" : "total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;ML-DmD17-c3;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -373,7 +373,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "antenna disc-derived cell-line", + "Tissue" : "Antenna disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -388,7 +388,7 @@ ], "Cell-Line" : "ML-DmD20-c2", "submission" : "56", - "label" : "total-RNA;ML-DmD20-c2;Larvae 3rd instar;antenna disc-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;ML-DmD20-c2;Larvae 3rd instar;Antenna disc-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -396,7 +396,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "antenna disc-derived cell-line", + "Tissue" : "Antenna disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -411,7 +411,7 @@ ], "Cell-Line" : "ML-DmD20-c5", "submission" : "57", - "label" : "total-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;ML-DmD20-c5;Larvae 3rd instar;Antenna disc-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -419,7 +419,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -434,7 +434,7 @@ ], "Cell-Line" : "ML-DmD21", "submission" : "58", - "label" : "total-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;ML-DmD21;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -442,7 +442,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -457,7 +457,7 @@ ], "Cell-Line" : "ML-DmD32", "submission" : "59", - "label" : "total-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;ML-DmD32;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -465,7 +465,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "imaginal disc-derived cell-line", + "Tissue" : "Imaginal disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -480,7 +480,7 @@ ], "Cell-Line" : "ML-DmD4-c1", "submission" : "60", - "label" : "total-RNA;ML-DmD4-c1;Larvae 3rd instar;imaginal disc-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;ML-DmD4-c1;Larvae 3rd instar;Imaginal disc-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -488,7 +488,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -503,7 +503,7 @@ ], "Cell-Line" : "ML-DmD8", "submission" : "61", - "label" : "total-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;ML-DmD8;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -511,7 +511,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -526,7 +526,7 @@ ], "Cell-Line" : "ML-DmD9", "submission" : "62", - "label" : "total-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;ML-DmD9;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -534,7 +534,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -549,7 +549,7 @@ ], "Cell-Line" : "S1", "submission" : "63", - "label" : "total-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;S1;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -557,7 +557,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -572,7 +572,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "64", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -580,7 +580,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -595,7 +595,7 @@ ], "Cell-Line" : "S2R+", "submission" : "65", - "label" : "total-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -603,7 +603,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -618,7 +618,7 @@ ], "Cell-Line" : "S3", "submission" : "66", - "label" : "total-RNA;S3;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;S3;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -626,7 +626,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -641,7 +641,7 @@ ], "Cell-Line" : "Sg4", "submission" : "67", - "label" : "total-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;Sg4;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -649,7 +649,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -664,7 +664,7 @@ ], "Cell-Line" : "ML-DmD16-c3", "submission" : "69", - "label" : "total-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -746,10 +746,10 @@ ], "submission" : "95", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;White prepupae (White prepupae (WPP));RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { @@ -768,10 +768,10 @@ ], "submission" : "96", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Female eclosion + 1 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;Adult Female, eclosion + 1 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -790,10 +790,10 @@ ], "submission" : "97", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Female eclosion + 5 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 5 days", + "Developmental-Stage" : "Adult Female, eclosion + 5 days", "organism" : "D. melanogaster" }, { @@ -812,10 +812,10 @@ ], "submission" : "98", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Male eclosion + 1 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;Adult Male, eclosion + 1 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 1 days", + "Developmental-Stage" : "Adult Male, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -834,10 +834,10 @@ ], "submission" : "99", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Male eclosion + 5 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;Adult Male, eclosion + 5 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 5 days", + "Developmental-Stage" : "Adult Male, eclosion + 5 days", "organism" : "D. melanogaster" }, { @@ -856,10 +856,10 @@ ], "submission" : "100", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , dark blue gut PS(1-2) stage larvae;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;L3 stage dark blue gut PS(1-2) stage larvae;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "L3 stage , dark blue gut PS(1-2) stage larvae", + "Developmental-Stage" : "L3 stage dark blue gut PS(1-2) stage larvae", "organism" : "D. melanogaster" }, { @@ -1371,7 +1371,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryonic/larval hemocyte", + "Tissue" : "Embryonic/larval hemocyte", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -1384,9 +1384,9 @@ "fly_ananas/CEL_CLINES/mbn2", "fly_virilis/CEL_CLINES/mbn2" ], - "Cell-Line" : "Mbn2", + "Cell-Line" : "mbn2", "submission" : "139", - "label" : "total-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-tiling-array", + "label" : "total-RNA;mbn2;Late Embryonic stage;Embryonic/larval hemocyte;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1394,7 +1394,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -1409,7 +1409,7 @@ ], "Cell-Line" : "CME-W2", "submission" : "140", - "label" : "total-RNA;CME-W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;CME-W2;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -1417,14 +1417,14 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_POL2/POLII4H8_N2_MXEMB" ], "submission" : "174", - "label" : "pol2;Mixed Embryos;20 degree celsius;ChIP-chip", + "label" : "RNA polymerase II;Mixed Embryos;20 degree celsius;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -1534,7 +1534,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4acTetra", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -1549,7 +1549,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "201", - "label" : "H4acTetra;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4acTetra;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1574,7 +1574,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -1589,7 +1589,7 @@ ], "Cell-Line" : "Kc167", "submission" : "267", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1597,7 +1597,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -1612,7 +1612,7 @@ ], "Cell-Line" : "Kc167", "submission" : "268", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1620,7 +1620,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "BEAF-32", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1635,7 +1635,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "274", - "label" : "BEAF-32;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "BEAF-32;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1666,7 +1666,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "Chriz", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1681,7 +1681,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "276", - "label" : "Chriz;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "Chriz;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -1689,7 +1689,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Chriz", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1704,7 +1704,7 @@ ], "Cell-Line" : "Kc167", "submission" : "277", - "label" : "Chriz;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Chriz;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1712,7 +1712,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Chriz", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1727,7 +1727,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "278", - "label" : "Chriz;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Chriz;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1735,7 +1735,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Chriz", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1750,7 +1750,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "279", - "label" : "Chriz;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Chriz;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1758,7 +1758,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CP190", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1773,7 +1773,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "280", - "label" : "CP190;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CP190;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1804,7 +1804,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1819,7 +1819,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "283", - "label" : "CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CTCF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1827,8 +1827,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "Ez", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Enhancer-of-zeste", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -1842,7 +1842,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "284", - "label" : "Ez;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Enhancer-of-zeste;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1850,7 +1850,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "GAF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -1865,7 +1865,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "285", - "label" : "GAF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "GAF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1896,7 +1896,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H2Bubi", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -1911,7 +1911,7 @@ ], "Cell-Line" : "Kc167", "submission" : "289", - "label" : "H2Bubi;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H2Bubi;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1919,7 +1919,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H2Bubi", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -1934,7 +1934,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "290", - "label" : "H2Bubi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H2Bubi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -1965,7 +1965,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K18ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -1980,7 +1980,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "292", - "label" : "H3K18ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K18ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2011,7 +2011,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K23ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2026,7 +2026,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "294", - "label" : "H3K23ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K23ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2057,7 +2057,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2072,7 +2072,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "296", - "label" : "H3K27ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2103,7 +2103,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2118,7 +2118,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "298", - "label" : "H3K27me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27me3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2172,7 +2172,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K36me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2187,7 +2187,7 @@ ], "Cell-Line" : "Kc167", "submission" : "302", - "label" : "H3K36me3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K36me3;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2195,7 +2195,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K36me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2210,7 +2210,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "303", - "label" : "H3K36me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K36me3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2218,7 +2218,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2233,7 +2233,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "304", - "label" : "H3K4me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2241,7 +2241,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2255,7 +2255,7 @@ "fly/KARPEN_CHIPCHIP_HISMODS_H3_S2/H3K4Me3_LP.S2" ], "submission" : "305", - "label" : "H3K4me3;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me3;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2286,7 +2286,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K79me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2301,7 +2301,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "307", - "label" : "H3K79me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K79me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2309,7 +2309,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2324,7 +2324,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "309", - "label" : "H3K9ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2355,7 +2355,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2370,7 +2370,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "311", - "label" : "H3K9me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2401,7 +2401,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2416,7 +2416,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "313", - "label" : "H3K9me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2447,7 +2447,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H4K16ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2462,7 +2462,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "317", - "label" : "H4K16ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H4K16ac;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -2470,7 +2470,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K16ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2485,7 +2485,7 @@ ], "Cell-Line" : "Kc167", "submission" : "318", - "label" : "H4K16ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K16ac;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2493,7 +2493,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K16ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2508,7 +2508,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "319", - "label" : "H4K16ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K16ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2516,7 +2516,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K16ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2531,7 +2531,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "320", - "label" : "H4K16ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K16ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2539,7 +2539,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K5ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2554,7 +2554,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "321", - "label" : "H4K5ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K5ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2562,7 +2562,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K8ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2577,7 +2577,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "322", - "label" : "H4K8ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K8ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2585,7 +2585,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1a", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -2600,7 +2600,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "323", - "label" : "HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1a;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2654,7 +2654,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Pc", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -2669,7 +2669,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "326", - "label" : "Pc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Pc;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2677,8 +2677,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", - "factor" : "pol2", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -2692,7 +2692,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "327", - "label" : "pol2;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "RNA polymerase II;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -2700,8 +2700,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "pol2", + "Tissue" : "Embryo-derived cell-line", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -2715,7 +2715,7 @@ ], "Cell-Line" : "Kc167", "submission" : "328", - "label" : "pol2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RNA polymerase II;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2723,8 +2723,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "pol2", + "Tissue" : "Embryo-derived cell-line", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -2738,7 +2738,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "329", - "label" : "pol2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RNA polymerase II;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2746,7 +2746,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(Hw)", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -2761,7 +2761,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "330", - "label" : "Su(Hw);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(Hw);S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2769,7 +2769,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(Hw)", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -2784,7 +2784,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "331", - "label" : "Su(Hw);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(Hw);S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2863,7 +2863,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -2878,7 +2878,7 @@ ], "Cell-Line" : "Kc167", "submission" : "342", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2971,7 +2971,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -2986,7 +2986,7 @@ ], "Cell-Line" : "Kc167", "submission" : "360", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -2994,7 +2994,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -3009,7 +3009,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "362", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -3017,7 +3017,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -3032,7 +3032,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "364", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -4244,7 +4244,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "panneural", + "Tissue" : "Panneural", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4253,7 +4253,7 @@ ], "submission" : "455", "Strain" : "NW1229", - "label" : "total-RNA;NW1229;Mixed stage of Embryos;20 degree celsius;panneural;RNA-tiling-array", + "label" : "total-RNA;NW1229;Mixed stage of Embryos;20 degree celsius;Panneural;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4262,7 +4262,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "reference (embryo)", + "Tissue" : "Reference (embryo)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4271,7 +4271,7 @@ ], "submission" : "456", "Strain" : "N2", - "label" : "total-RNA;N2;Mixed stage of Embryos;20 degree celsius;reference (embryo);RNA-tiling-array", + "label" : "total-RNA;N2;Mixed stage of Embryos;20 degree celsius;Reference (embryo);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4280,7 +4280,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "intestinal cells", + "Tissue" : "Intestinal cells", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4289,7 +4289,7 @@ ], "submission" : "457", "Strain" : "JR1130", - "label" : "total-RNA;JR1130;Mixed stage of Embryos;20 degree celsius;intestinal cells;RNA-tiling-array", + "label" : "total-RNA;JR1130;Mixed stage of Embryos;20 degree celsius;Intestinal cells;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4298,7 +4298,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "coelomocytes", + "Tissue" : "Coelomocytes", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4307,7 +4307,7 @@ ], "submission" : "458", "Strain" : "TV1112", - "label" : "total-RNA;TV1112;Mixed stage of Embryos;20 degree celsius;coelomocytes;RNA-tiling-array", + "label" : "total-RNA;TV1112;Mixed stage of Embryos;20 degree celsius;Coelomocytes;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4316,7 +4316,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-AVA", + "Tissue" : "Embryo-AVA", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4325,7 +4325,7 @@ ], "submission" : "459", "Strain" : "NC1749", - "label" : "total-RNA;NC1749;Mixed stage of Embryos;20 degree celsius;embryo-AVA;RNA-tiling-array", + "label" : "total-RNA;NC1749;Mixed stage of Embryos;20 degree celsius;Embryo-AVA;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4352,7 +4352,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "reference (L2)", + "Tissue" : "Reference (L2)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4361,7 +4361,7 @@ ], "submission" : "461", "Strain" : "N2", - "label" : "total-RNA;N2;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;reference (L2);RNA-tiling-array", + "label" : "total-RNA;N2;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Reference (L2);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mid-L2 22 hr post-L1 stage larvae", @@ -4370,7 +4370,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "Pan-neural (L2)", + "Tissue" : "Panneural (L2)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4379,7 +4379,7 @@ ], "submission" : "462", "Strain" : "SD1241", - "label" : "total-RNA;SD1241;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Pan-neural (L2);RNA-tiling-array", + "label" : "total-RNA;SD1241;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Panneural (L2);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mid-L2 22 hr post-L1 stage larvae", @@ -4424,7 +4424,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "body wall muscle", + "Tissue" : "Body wall muscle", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4433,7 +4433,7 @@ ], "submission" : "465", "Strain" : "SD1075", - "label" : "total-RNA;SD1075;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;body wall muscle;RNA-tiling-array", + "label" : "total-RNA;SD1075;Mid-L2 22 hr post-L1 stage larvae;20 degree celsius;Body wall muscle;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mid-L2 22 hr post-L1 stage larvae", @@ -4460,7 +4460,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dopaminergic neurons (embryonic)", + "Tissue" : "Dopaminergic neurons (embryonic)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4469,7 +4469,7 @@ ], "submission" : "467", "Strain" : "BY200", - "label" : "total-RNA;BY200;Mixed stage of Embryos;20 degree celsius;dopaminergic neurons (embryonic);RNA-tiling-array", + "label" : "total-RNA;BY200;Mixed stage of Embryos;20 degree celsius;Dopaminergic neurons (embryonic);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4514,7 +4514,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "body wall muscle", + "Tissue" : "Body wall muscle", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -4523,7 +4523,7 @@ ], "submission" : "470", "Strain" : "PD4251", - "label" : "total-RNA;PD4251;Mixed stage of Embryos;20 degree celsius;body wall muscle;RNA-tiling-array", + "label" : "total-RNA;PD4251;Mixed stage of Embryos;20 degree celsius;Body wall muscle;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -4652,10 +4652,10 @@ ], "submission" : "479", "Strain" : "N2", - "label" : "total-RNA;N2;Late Embryos 4.5 hrs post-early embryo;RNA-tiling-array", + "label" : "total-RNA;N2;Late Embryonic stage 4.5 hrs post-early Embryos;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Late Embryos 4.5 hrs post-early embryo", + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", "organism" : "C. elegans" }, { @@ -4899,10 +4899,10 @@ ], "submission" : "538", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , 12 hr post-molt stage larvae;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;L3 stage 12 hr post-molt stage larvae;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "L3 stage , 12 hr post-molt stage larvae", + "Developmental-Stage" : "L3 stage 12 hr post-molt stage larvae", "organism" : "D. melanogaster" }, { @@ -4921,10 +4921,10 @@ ], "submission" : "539", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , clear gut PS(7-9) stage larvae;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;L3 stage clear gut PS(7-9) stage larvae;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "L3 stage , clear gut PS(7-9) stage larvae", + "Developmental-Stage" : "L3 stage clear gut PS(7-9) stage larvae", "organism" : "D. melanogaster" }, { @@ -4943,10 +4943,10 @@ ], "submission" : "540", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , dark blue gut PS(1-2) stage larvae;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;L3 stage dark blue gut PS(1-2) stage larvae;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "L3 stage , dark blue gut PS(1-2) stage larvae", + "Developmental-Stage" : "L3 stage dark blue gut PS(1-2) stage larvae", "organism" : "D. melanogaster" }, { @@ -4965,10 +4965,10 @@ ], "submission" : "541", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 2 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP) + 2 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 2 days", + "Developmental-Stage" : "White prepupae (WPP) + 2 days", "organism" : "D. melanogaster" }, { @@ -4987,10 +4987,10 @@ ], "submission" : "542", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 3 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP) + 3 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 3 days", + "Developmental-Stage" : "White prepupae (WPP) + 3 days", "organism" : "D. melanogaster" }, { @@ -5009,10 +5009,10 @@ ], "submission" : "543", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 4 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP) + 4 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 4 days", + "Developmental-Stage" : "White prepupae (WPP) + 4 days", "organism" : "D. melanogaster" }, { @@ -5360,14 +5360,14 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_POL2/8WG16_N2_L4" ], "submission" : "599", - "label" : "pol2;Larvae L4 stage;20 degree celsius;ChIP-chip", + "label" : "RNA polymerase II;Larvae L4 stage;20 degree celsius;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L4 stage", @@ -5462,7 +5462,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "Invected", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5476,7 +5476,7 @@ "fly/White_CC_SG_SEGPOL/E0_12_INV7657" ], "submission" : "605", - "label" : "Invected;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "Invected;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5484,7 +5484,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "DLL", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5498,7 +5498,7 @@ "fly_ananas/White_CC_SG_TRANSFACT/E0_12_dll" ], "submission" : "606", - "label" : "DLL;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "DLL;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5506,8 +5506,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", - "factor" : "cbp", + "Tissue" : "Embryo", + "factor" : "CtBP", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -5520,7 +5520,7 @@ "fly/White_CC_SG_TRANSFACT/E0_12_dCtBP7667" ], "submission" : "607", - "label" : "cbp;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "CtBP;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5549,7 +5549,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "Brakeless", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5563,7 +5563,7 @@ "fly_ananas/White_CC_SG_CNS/E0_12_bks" ], "submission" : "609", - "label" : "Brakeless;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "Brakeless;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5655,7 +5655,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "UBX", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5669,7 +5669,7 @@ "fly_dmoj/White_CC_SG_HOMEOTIC/E0_12_UBX7701" ], "submission" : "614", - "label" : "UBX;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "UBX;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5677,7 +5677,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "TRAMTRACK", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5691,7 +5691,7 @@ "fly_dmoj/White_CC_SG_TRANSFACT/E0_12_TTK" ], "submission" : "615", - "label" : "TRAMTRACK;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "TRAMTRACK;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5699,7 +5699,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "Stat92E", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5713,7 +5713,7 @@ "fly_ananas/White_CC_SG_NTWCF/E0_12_Stat92E" ], "submission" : "616", - "label" : "Stat92E;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "Stat92E;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5721,7 +5721,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "RUNT", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5735,7 +5735,7 @@ "fly_simul/White_CC_SG_PAIRRULE" ], "submission" : "617", - "label" : "RUNT;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "RUNT;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5743,7 +5743,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "KNOT", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5757,7 +5757,7 @@ "fly_dmoj/White_CC_SG_GAP/E0_12_KN" ], "submission" : "618", - "label" : "KNOT;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "KNOT;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5765,7 +5765,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "inv", + "factor" : "Invected", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -5779,7 +5779,7 @@ ], "submission" : "619", "Strain" : "INV-GFP", - "label" : "inv;INV-GFP;Embryos 0-12 hr;ChIP-chip", + "label" : "Invected;INV-GFP;Embryos 0-12 hr;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5787,7 +5787,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "H3K36me3", "target" : "Histone Modification", "principal_investigator" : "White, K.", @@ -5801,7 +5801,7 @@ "fly_dp/White_CC_embryo_0_12h/E0_12_H3K36Me3" ], "submission" : "620", - "label" : "H3K36me3;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "H3K36me3;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5809,7 +5809,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "H3K9me3", "target" : "Histone Modification", "principal_investigator" : "White, K.", @@ -5823,7 +5823,7 @@ "fly/White_CC_embryo_0_12h/E0_12_H3K9Me3" ], "submission" : "621", - "label" : "H3K9me3;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "H3K9me3;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5831,7 +5831,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "H3K4me3", "target" : "Histone Modification", "principal_investigator" : "White, K.", @@ -5845,7 +5845,7 @@ "fly_yakuba/White_CC_embryo_0_12h/E0_12h_H3K4Me3" ], "submission" : "622", - "label" : "H3K4me3;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "H3K4me3;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5853,8 +5853,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", - "factor" : "GRO", + "Tissue" : "Embryo", + "factor" : "GROUCHO", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -5867,7 +5867,7 @@ "fly_ananas/White_CC_SG_NEURO/E0_12_Gro3" ], "submission" : "623", - "label" : "GRO;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "GROUCHO;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5875,7 +5875,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "FTZ-F1", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5889,7 +5889,7 @@ "fly_dmoj/White_CC_SG_NTWCF/E0_12_FTZ_F1" ], "submission" : "624", - "label" : "FTZ-F1;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "FTZ-F1;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5897,7 +5897,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "ENGRAILED", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5911,7 +5911,7 @@ "fly_virilis/White_CC_SG_SEGPOL/E0_12_ENserum" ], "submission" : "625", - "label" : "ENGRAILED;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "ENGRAILED;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5919,7 +5919,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "Dichaete", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5933,7 +5933,7 @@ "fly_ananas/White_CC_SG_CNS/E0_12_D" ], "submission" : "626", - "label" : "Dichaete;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "Dichaete;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5941,7 +5941,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "cnc", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5955,7 +5955,7 @@ "fly_simul/White_CC_SG_GAP/E0-12_CNC" ], "submission" : "627", - "label" : "cnc;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "cnc;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -5963,7 +5963,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo", + "Tissue" : "Embryo", "factor" : "BAB-1", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -5977,7 +5977,7 @@ "fly_yakuba/White_CC_SG_TRANSFACT/E0_12_bab1" ], "submission" : "628", - "label" : "BAB-1;Embryos 0-12 hr;embryo;ChIP-chip", + "label" : "BAB-1;Embryos 0-12 hr;Embryo;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -6001,13 +6001,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "633", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6159,13 +6159,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "650", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6187,13 +6187,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "652", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -6201,7 +6201,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "unc-4 neurons (embryonic)", + "Tissue" : "Unc-4 neurons (embryonic)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -6210,7 +6210,7 @@ ], "submission" : "654", "Strain" : "NC300", - "label" : "total-RNA;NC300;Mixed stage of Embryos;20 degree celsius;unc-4 neurons (embryonic);RNA-tiling-array", + "label" : "total-RNA;NC300;Mixed stage of Embryos;20 degree celsius;Unc-4 neurons (embryonic);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -6237,7 +6237,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "reference (YA)", + "Tissue" : "Reference (YA)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -6246,7 +6246,7 @@ ], "submission" : "656", "Strain" : "N2", - "label" : "total-RNA;N2;Young Adult 72 hr post-L1 stage larvae;20 degree celsius;reference (YA);RNA-tiling-array", + "label" : "total-RNA;N2;Young Adult 72 hr post-L1 stage larvae;20 degree celsius;Reference (YA);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Young Adult 72 hr post-L1 stage larvae", @@ -6291,7 +6291,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "reference (L3-L4)", + "Tissue" : "Reference (L3-L4)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -6300,7 +6300,7 @@ ], "submission" : "659", "Strain" : "N2", - "label" : "total-RNA;N2;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;reference (L3-L4);RNA-tiling-array", + "label" : "total-RNA;N2;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;Reference (L3-L4);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "L3-L4 22 hr 23dC 24 hr post-L1 stage larvae", @@ -6327,7 +6327,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "germ line precursor (embryonic)", + "Tissue" : "Germ line precursor (embryonic)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -6336,7 +6336,7 @@ ], "submission" : "661", "Strain" : "SS747", - "label" : "total-RNA;SS747;Mixed stage of Embryos;20 degree celsius;germ line precursor (embryonic);RNA-tiling-array", + "label" : "total-RNA;SS747;Mixed stage of Embryos;20 degree celsius;Germ line precursor (embryonic);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -6345,7 +6345,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "hypodermis", + "Tissue" : "Hypodermis", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -6354,7 +6354,7 @@ ], "submission" : "662", "Strain" : "DM8001", - "label" : "total-RNA;DM8001;Mixed stage of Embryos;20 degree celsius;hypodermis;RNA-tiling-array", + "label" : "total-RNA;DM8001;Mixed stage of Embryos;20 degree celsius;Hypodermis;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -6363,14 +6363,14 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_POL2/8WG16_N2_EEMB" ], "submission" : "663", - "label" : "pol2;Early Embryos;20 degree celsius;ChIP-chip", + "label" : "RNA polymerase II;Early Embryos;20 degree celsius;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Early Embryos", @@ -6379,7 +6379,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Timing", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -6394,7 +6394,7 @@ ], "Cell-Line" : "Kc167", "submission" : "668", - "label" : "Replication-Timing;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Replication-Timing;Kc167;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6402,7 +6402,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Timing", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -6417,7 +6417,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "669", - "label" : "Replication-Timing;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Replication-Timing;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6448,7 +6448,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ORC2", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -6463,7 +6463,7 @@ ], "Cell-Line" : "Kc167", "submission" : "674", - "label" : "ORC2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ORC2;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6471,7 +6471,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MCM2-7", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -6486,7 +6486,7 @@ ], "Cell-Line" : "Kc167", "submission" : "675", - "label" : "MCM2-7;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MCM2-7;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6578,7 +6578,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Origin", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -6593,7 +6593,7 @@ ], "Cell-Line" : "Kc167", "submission" : "709", - "label" : "Replication-Origin;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Replication-Origin;Kc167;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6601,7 +6601,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Origin", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -6616,7 +6616,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "710", - "label" : "Replication-Origin;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Replication-Origin;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6692,7 +6692,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -6707,7 +6707,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "715", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6738,7 +6738,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -6753,7 +6753,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "717", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-tiling-array", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -6761,7 +6761,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -6776,7 +6776,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "718", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6784,7 +6784,7 @@ }, { "technique" : "CGH", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -6800,7 +6800,7 @@ "Cell-Line" : "S2-DRSC", "submission" : "725", "Strain" : "w1118", - "label" : "Replication-Copy-Number;S2-DRSC;w1118;Embryos 0-4 hr;embryo-derived cell-line;CGH", + "label" : "Replication-Copy-Number;S2-DRSC;w1118;Embryos 0-4 hr;Embryo-derived cell-line;CGH", "category" : "Copy Number Variation", "type" : "data set", "Developmental-Stage" : "Embryos 0-4 hr", @@ -6840,13 +6840,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", "Cell-Line" : "Kc-Rubin", "submission" : "738", - "label" : "small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;Kc-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6881,7 +6881,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -6903,7 +6903,7 @@ ], "Cell-Line" : "S2-Rubin", "submission" : "741", - "label" : "small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -6968,13 +6968,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", "Cell-Line" : "S2-Rubin", "submission" : "746", - "label" : "small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -9028,7 +9028,7 @@ }, { "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9042,7 +9042,7 @@ ], "submission" : "846", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Embryos 4-8 hr;ChIP-seq", + "label" : "RNA polymerase II;Y cn bw sp;Embryos 4-8 hr;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 4-8 hr", @@ -9050,7 +9050,7 @@ }, { "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9064,7 +9064,7 @@ ], "submission" : "847", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Embryos 8-12 hr;ChIP-seq", + "label" : "RNA polymerase II;Y cn bw sp;Embryos 8-12 hr;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 8-12 hr", @@ -9073,7 +9073,7 @@ { "threshold" : "44", "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9087,7 +9087,7 @@ ], "submission" : "848", "Strain" : "Y cn bw sp", - "label" : "pol2;44;Y cn bw sp;Embryos 12-16 hr;ChIP-seq", + "label" : "RNA polymerase II;44;Y cn bw sp;Embryos 12-16 hr;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 12-16 hr", @@ -9118,7 +9118,7 @@ { "threshold" : "19.9", "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9132,7 +9132,7 @@ ], "submission" : "850", "Strain" : "Y cn bw sp", - "label" : "pol2;19.9;Y cn bw sp;Embryos 20-24 hr;ChIP-seq", + "label" : "RNA polymerase II;19.9;Y cn bw sp;Embryos 20-24 hr;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 20-24 hr", @@ -9140,7 +9140,7 @@ }, { "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9154,7 +9154,7 @@ ], "submission" : "851", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Larvae L1 stage;ChIP-seq", + "label" : "RNA polymerase II;Y cn bw sp;Larvae L1 stage;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L1 stage", @@ -9162,7 +9162,7 @@ }, { "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9176,7 +9176,7 @@ ], "submission" : "852", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Larvae L3 stage;ChIP-seq", + "label" : "RNA polymerase II;Y cn bw sp;Larvae L3 stage;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L3 stage", @@ -9184,7 +9184,7 @@ }, { "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9198,7 +9198,7 @@ ], "submission" : "853", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Pupae;ChIP-seq", + "label" : "RNA polymerase II;Y cn bw sp;Pupae;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Pupae", @@ -9830,7 +9830,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9843,7 +9843,7 @@ "fly_simul/White_CC_SG_POLII/L2_PolII" ], "submission" : "883", - "label" : "pol2;Larvae L2 stage;ChIP-chip", + "label" : "RNA polymerase II;Larvae L2 stage;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L2 stage", @@ -9851,7 +9851,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9864,7 +9864,7 @@ "fly_dp/White_CC_SG_POLII/L3_PolII" ], "submission" : "884", - "label" : "pol2;Larvae L3 stage;ChIP-chip", + "label" : "RNA polymerase II;Larvae L3 stage;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L3 stage", @@ -9872,7 +9872,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9885,7 +9885,7 @@ "fly_dp/White_CC_SG_8WG16/E0_4_8wg16_set2" ], "submission" : "885", - "label" : "pol2;Embryos 0-4 hr;ChIP-chip", + "label" : "RNA polymerase II;Embryos 0-4 hr;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-4 hr", @@ -9893,7 +9893,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9906,7 +9906,7 @@ "fly_virilis/White_CC_SG_8WG16/E4_8_8wg16_set2" ], "submission" : "886", - "label" : "pol2;Embryos 4-8 hr;ChIP-chip", + "label" : "RNA polymerase II;Embryos 4-8 hr;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 4-8 hr", @@ -9914,7 +9914,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9927,7 +9927,7 @@ "fly_dmoj/White_CC_SG_8WG16/E4_8_8wg16" ], "submission" : "887", - "label" : "pol2;Embryos 4-8 hr;ChIP-chip", + "label" : "RNA polymerase II;Embryos 4-8 hr;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 4-8 hr", @@ -9935,7 +9935,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9948,7 +9948,7 @@ "fly_yakuba/White_CC_SG_8WG16/E16_20_8wg16_set2" ], "submission" : "888", - "label" : "pol2;Embryos 16-20 hr;ChIP-chip", + "label" : "RNA polymerase II;Embryos 16-20 hr;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 16-20 hr", @@ -9956,7 +9956,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9969,7 +9969,7 @@ "fly_simul/White_CC_SG_8WG16/L3_8wg16" ], "submission" : "889", - "label" : "pol2;Larvae L3 stage;ChIP-chip", + "label" : "RNA polymerase II;Larvae L3 stage;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L3 stage", @@ -9977,7 +9977,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -9991,7 +9991,7 @@ ], "submission" : "890", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Pupae;ChIP-chip", + "label" : "RNA polymerase II;Y cn bw sp;Pupae;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Pupae", @@ -9999,7 +9999,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -10012,7 +10012,7 @@ "fly_dmoj/White_CC_SG_8WG16/AdultFemale_8wg16_set2" ], "submission" : "891", - "label" : "pol2;Adult Female;ChIP-chip", + "label" : "RNA polymerase II;Adult Female;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Adult Female", @@ -10080,7 +10080,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -10093,7 +10093,7 @@ "fly/White_CC_SG_POLII/E0_12_PolII" ], "submission" : "899", - "label" : "pol2;Embryos 0-12 hr;ChIP-chip", + "label" : "RNA polymerase II;Embryos 0-12 hr;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-12 hr", @@ -10187,7 +10187,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -10201,7 +10201,7 @@ ], "submission" : "904", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Larvae L2 stage;ChIP-chip", + "label" : "RNA polymerase II;Y cn bw sp;Larvae L2 stage;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L2 stage", @@ -10231,7 +10231,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -10245,7 +10245,7 @@ ], "submission" : "906", "Strain" : "Y cn bw sp", - "label" : "pol2;Y cn bw sp;Embryos 12-16 hr;ChIP-chip", + "label" : "RNA polymerase II;Y cn bw sp;Embryos 12-16 hr;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 12-16 hr", @@ -10253,7 +10253,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", @@ -10268,7 +10268,7 @@ ], "Cell-Line" : "Kc167", "submission" : "908", - "label" : "CTCF;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CTCF;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10292,7 +10292,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8144-RNAi", "target" : "mRNA", @@ -10308,7 +10308,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "910", - "label" : "total-RNA;CG8144-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8144-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10332,7 +10332,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me3", "target" : "Histone Modification", "principal_investigator" : "White, K.", @@ -10347,7 +10347,7 @@ ], "Cell-Line" : "Kc167", "submission" : "912", - "label" : "H3K4me3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me3;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10355,7 +10355,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", @@ -10370,7 +10370,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "913", - "label" : "CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CTCF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10378,7 +10378,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me3", "target" : "Histone Modification", "principal_investigator" : "White, K.", @@ -10393,7 +10393,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "914", - "label" : "H3K4me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10467,7 +10467,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "BEAF-32", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10482,7 +10482,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "922", - "label" : "BEAF-32;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "BEAF-32;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10513,7 +10513,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CP190", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10528,7 +10528,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "925", - "label" : "CP190;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CP190;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10536,7 +10536,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dMi-2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10551,7 +10551,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "926", - "label" : "dMi-2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dMi-2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10582,7 +10582,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dRING", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10597,7 +10597,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "928", - "label" : "dRING;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dRING;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10605,7 +10605,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K18ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -10620,7 +10620,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "930", - "label" : "H3K18ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K18ac;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -10672,7 +10672,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K9me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -10687,7 +10687,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "937", - "label" : "H3K9me2;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K9me2;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -10695,7 +10695,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -10710,7 +10710,7 @@ ], "Cell-Line" : "Kc167", "submission" : "938", - "label" : "H3K9me2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me2;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10718,7 +10718,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K9me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -10733,7 +10733,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "940", - "label" : "H3K9me3;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K9me3;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -10741,7 +10741,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1b", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10756,7 +10756,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "941", - "label" : "HP1b;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1b;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10787,7 +10787,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1c", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10802,7 +10802,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "943", - "label" : "HP1c;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1c;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10810,7 +10810,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10825,7 +10825,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "944", - "label" : "HP2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10833,7 +10833,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "JIL-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10848,7 +10848,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "945", - "label" : "JIL-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "JIL-1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10856,7 +10856,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MBD-R2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10871,7 +10871,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "946", - "label" : "MBD-R2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MBD-R2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10879,7 +10879,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "NURF301", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10894,7 +10894,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "947", - "label" : "NURF301;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "NURF301;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10932,7 +10932,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PIWI", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -10947,7 +10947,7 @@ ], "Cell-Line" : "Kc167", "submission" : "949", - "label" : "PIWI;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "PIWI;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -10956,7 +10956,7 @@ { "technique" : "ChIP-chip", "Tissue" : "CNS-derived cell-line", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -10970,7 +10970,7 @@ ], "Cell-Line" : "ML-DmBG3-c2", "submission" : "950", - "label" : "pol2;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", + "label" : "RNA polymerase II;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -11024,7 +11024,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "WDS", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -11039,7 +11039,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "953", - "label" : "WDS;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "WDS;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -11161,7 +11161,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K79me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -11176,7 +11176,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "963", - "label" : "H3K79me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K79me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -11184,7 +11184,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K9ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -11199,7 +11199,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "964", - "label" : "H3K9ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K9ac;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -11207,7 +11207,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -11222,7 +11222,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "965", - "label" : "H3K4me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -11395,7 +11395,7 @@ { "threshold" : "16.2", "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -11409,7 +11409,7 @@ ], "submission" : "984", "Strain" : "Y cn bw sp", - "label" : "pol2;16.2;Y cn bw sp;Larvae L2 stage;ChIP-seq", + "label" : "RNA polymerase II;16.2;Y cn bw sp;Larvae L2 stage;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae L2 stage", @@ -11461,13 +11461,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", "Cell-Line" : "ML-DmD21", "submission" : "2005", - "label" : "small-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;ML-DmD21;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -11475,13 +11475,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", "Cell-Line" : "1182-4H", "submission" : "2006", - "label" : "small-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;1182-4H;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -11510,10 +11510,10 @@ ], "submission" : "2008", "Strain" : "Y cn bw sp", - "label" : "small-RNA;Y cn bw sp;Adult Male eclosion + 1 days;RNA-seq", + "label" : "small-RNA;Y cn bw sp;Adult Male, eclosion + 1 days;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 1 days", + "Developmental-Stage" : "Adult Male, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -11539,10 +11539,10 @@ ], "submission" : "2009", "Strain" : "Y cn bw sp", - "label" : "small-RNA;Y cn bw sp;Adult Female eclosion + 1 days;RNA-seq", + "label" : "small-RNA;Y cn bw sp;Adult Female, eclosion + 1 days;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -12080,10 +12080,10 @@ ], "submission" : "2340", "Strain" : "Oregon-R", - "label" : "total-RNA;Oregon-R;Adult Female eclosion + 4 days;Adult ovaries;RNA-tiling-array", + "label" : "total-RNA;Oregon-R;Adult Female, eclosion + 4 days;Adult ovaries;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Adult Female, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -12103,10 +12103,10 @@ ], "submission" : "2341", "Strain" : "Oregon-R", - "label" : "total-RNA;Oregon-R;Adult Female eclosion + 1 days;Female heads;RNA-tiling-array", + "label" : "total-RNA;Oregon-R;Adult Female, eclosion + 1 days;Female heads;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -12126,10 +12126,10 @@ ], "submission" : "2342", "Strain" : "Oregon-R", - "label" : "total-RNA;Oregon-R;Adult Female eclosion + 1 days;Female heads;RNA-tiling-array", + "label" : "total-RNA;Oregon-R;Adult Female, eclosion + 1 days;Female heads;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -12151,7 +12151,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -12173,7 +12173,7 @@ ], "Cell-Line" : "Kc-Rubin", "submission" : "2374", - "label" : "small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;Kc-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -12181,7 +12181,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -12203,7 +12203,7 @@ ], "Cell-Line" : "S2-NP", "submission" : "2375", - "label" : "small-RNA;S2-NP;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-NP;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -12241,7 +12241,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -12263,7 +12263,7 @@ ], "Cell-Line" : "S2-Rubin", "submission" : "2379", - "label" : "small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -12271,7 +12271,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -12293,7 +12293,7 @@ ], "Cell-Line" : "S2-Rubin", "submission" : "2380", - "label" : "small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -12347,7 +12347,7 @@ }, { "technique" : "CGH", - "Tissue" : "oocyte associated follicle cell", + "Tissue" : "Oocyte associated follicle cell", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -12362,15 +12362,15 @@ ], "submission" : "2384", "Strain" : "Oregon-R", - "label" : "Replication-Copy-Number;Oregon-R;Adult Female eclosion + 1 days;oocyte associated follicle cell;CGH", + "label" : "Replication-Copy-Number;Oregon-R;Adult Female, eclosion + 1 days;Oocyte associated follicle cell;CGH", "category" : "Copy Number Variation", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { "technique" : "CGH", - "Tissue" : "oocyte associated follicle cell", + "Tissue" : "Oocyte associated follicle cell", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -12385,10 +12385,10 @@ ], "submission" : "2385", "Strain" : "Oregon-R Orr-Weaver", - "label" : "Replication-Copy-Number;Oregon-R Orr-Weaver;Adult Female eclosion + 1 days;oocyte associated follicle cell;CGH", + "label" : "Replication-Copy-Number;Oregon-R Orr-Weaver;Adult Female, eclosion + 1 days;Oocyte associated follicle cell;CGH", "category" : "Copy Number Variation", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -12677,10 +12677,10 @@ ], "submission" : "2436", "Strain" : "N2", - "label" : "AMA-1;N2;Late Embryos 4.5 hrs post-early embryo;20 degree celsius;ChIP-seq", + "label" : "AMA-1;N2;Late Embryonic stage 4.5 hrs post-early Embryos;20 degree celsius;ChIP-seq", "category" : "TF binding sites", "type" : "data set", - "Developmental-Stage" : "Late Embryos 4.5 hrs post-early embryo", + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -12853,7 +12853,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "hypodermis (L3-L4)", + "Tissue" : "Hypodermis (L3-L4)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -12862,7 +12862,7 @@ ], "submission" : "2454", "Strain" : "NC1790", - "label" : "total-RNA;NC1790;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;hypodermis (L3-L4);RNA-tiling-array", + "label" : "total-RNA;NC1790;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;Hypodermis (L3-L4);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "L3-L4 22 hr 23dC 24 hr post-L1 stage larvae", @@ -12962,8 +12962,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "600 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -12980,7 +12980,7 @@ "extract" : "precipitate", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2502", - "label" : "His2Av;600 mM salt;1 – 2 hours;precipitate;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;600 mM salt;1 – 2 hours;precipitate;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -12988,8 +12988,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "150 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13006,7 +13006,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2503", - "label" : "His2Av;150 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;150 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13014,8 +13014,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "15 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13032,7 +13032,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2504", - "label" : "His2Av;15 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;15 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13040,8 +13040,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2A", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2A", "Compound" : "15 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13058,7 +13058,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2A", "submission" : "2505", - "label" : "His2A;15 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2A;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2A;15 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2A;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13066,8 +13066,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "15 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13084,7 +13084,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2506", - "label" : "His2Av;15 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;15 mM salt;1-2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13242,7 +13242,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "Nucleosome", "Compound" : "80 mM salt", "target" : "Chromatin Structure", @@ -13260,7 +13260,7 @@ "extract" : "soluble fraction", "Cell-Line" : "ML-DmD16-c3", "submission" : "2513", - "label" : "Nucleosome;80 mM salt;1-2 hours;soluble fraction;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array", + "label" : "Nucleosome;80 mM salt;1-2 hours;soluble fraction;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -13268,7 +13268,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "Nucleosome", "Compound" : "150 mM salt", "target" : "Chromatin Structure", @@ -13286,7 +13286,7 @@ "extract" : "soluble fraction", "Cell-Line" : "ML-DmD16-c3", "submission" : "2514", - "label" : "Nucleosome;150 mM salt;1-2 hours;soluble fraction;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array", + "label" : "Nucleosome;150 mM salt;1-2 hours;soluble fraction;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -13294,7 +13294,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "Nucleosome", "Compound" : "600 mM salt", "target" : "Chromatin Structure", @@ -13312,7 +13312,7 @@ "extract" : "soluble fraction", "Cell-Line" : "ML-DmD16-c3", "submission" : "2515", - "label" : "Nucleosome;600 mM salt;1-2 hours;soluble fraction;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array", + "label" : "Nucleosome;600 mM salt;1-2 hours;soluble fraction;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -13320,7 +13320,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "Nucleosome", "Compound" : "600 mM salt", "target" : "Chromatin Structure", @@ -13338,7 +13338,7 @@ "extract" : "precipitate", "Cell-Line" : "ML-DmD16-c3", "submission" : "2516", - "label" : "Nucleosome;600 mM salt;1-2 hours;precipitate;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;DNA-tiling-array", + "label" : "Nucleosome;600 mM salt;1-2 hours;precipitate;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -13346,7 +13346,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "80 mM salt", "target" : "Chromatin Structure", @@ -13364,7 +13364,7 @@ "extract" : "soluble fraction", "Cell-Line" : "S2-DRSC", "submission" : "2517", - "label" : "Nucleosome;80 mM salt;1 – 2 hours;soluble fraction;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;80 mM salt;1 – 2 hours;soluble fraction;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13372,8 +13372,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2A", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2A", "Compound" : "80 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13390,7 +13390,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2A", "submission" : "2518", - "label" : "His2A;80 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2A;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2A;80 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2A;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13398,8 +13398,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "80 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13416,7 +13416,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2519", - "label" : "His2Av;80 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;80 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13424,8 +13424,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His3.3A", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H3.3A", "Compound" : "80 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13442,7 +13442,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H3.3", "submission" : "2520", - "label" : "His3.3A;80 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3.3;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H3.3A;80 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3.3;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13450,8 +13450,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "80-150 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13468,7 +13468,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2521", - "label" : "His2Av;80-150 mM salt;1.5 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;80-150 mM salt;1.5 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13476,7 +13476,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "80-150 mM salt", "target" : "Chromatin Structure", @@ -13494,7 +13494,7 @@ "extract" : "soluble fraction", "Cell-Line" : "S2-DRSC", "submission" : "2522", - "label" : "Nucleosome;80-150 mM salt;3 hours;soluble fraction;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;80-150 mM salt;3 hours;soluble fraction;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13502,8 +13502,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His3.3A", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H3.3A", "Compound" : "80-600 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13520,7 +13520,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H3.3", "submission" : "2523", - "label" : "His3.3A;80-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3.3;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H3.3A;80-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3.3;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13528,8 +13528,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "80-600 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13546,7 +13546,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2524", - "label" : "His2Av;80-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;80-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13554,8 +13554,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "150-600 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13572,7 +13572,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2525", - "label" : "His2Av;150-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;150-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13580,8 +13580,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His3", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H3", "Compound" : "150-600 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13598,7 +13598,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H3", "submission" : "2526", - "label" : "His3;150-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H3;150-600 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13606,7 +13606,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "150-600 mM salt", "target" : "Chromatin Structure", @@ -13624,7 +13624,7 @@ "extract" : "soluble fraction", "Cell-Line" : "S2-DRSC", "submission" : "2527", - "label" : "Nucleosome;150-600 mM salt;1 – 2 hours;soluble fraction;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;150-600 mM salt;1 – 2 hours;soluble fraction;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13632,8 +13632,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His3.3A", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H3.3A", "Compound" : "15 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13650,7 +13650,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H3.3", "submission" : "2528", - "label" : "His3.3A;15 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3.3;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H3.3A;15 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H3.3;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13658,8 +13658,8 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", - "factor" : "His2Av", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "Compound" : "15 mM salt", "target" : "Chromatin Structure", "principal_investigator" : "Henikoff, S.", @@ -13676,7 +13676,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Fly biotin-tagged H2Av", "submission" : "2529", - "label" : "His2Av;15 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "H2Av;15 mM salt;1 – 2 hours;soluble fraction;Fly biotin-tagged H2Av;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13863,7 +13863,7 @@ }, { "technique" : "CGH", - "Tissue" : "larval salivary gland", + "Tissue" : "Larval salivary gland", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -13877,7 +13877,7 @@ "fly/MacAlpine_CGH_TISSUES/Follicle_OregonR-Orr-Weaver" ], "submission" : "2544", - "label" : "Replication-Copy-Number;Embryos 0-4 hr;larval salivary gland;CGH", + "label" : "Replication-Copy-Number;Embryos 0-4 hr;Larval salivary gland;CGH", "category" : "Copy Number Variation", "type" : "data set", "Developmental-Stage" : "Embryos 0-4 hr", @@ -13885,7 +13885,7 @@ }, { "technique" : "CGH", - "Tissue" : "larval salivary gland", + "Tissue" : "Larval salivary gland", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -13900,7 +13900,7 @@ ], "submission" : "2545", "Strain" : "Oregon-R Orr-Weaver", - "label" : "Replication-Copy-Number;Oregon-R Orr-Weaver;Embryos 0-4 hr;larval salivary gland;CGH", + "label" : "Replication-Copy-Number;Oregon-R Orr-Weaver;Embryos 0-4 hr;Larval salivary gland;CGH", "category" : "Copy Number Variation", "type" : "data set", "Developmental-Stage" : "Embryos 0-4 hr", @@ -13922,7 +13922,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "pharyngeal muscle", + "Tissue" : "Pharyngeal muscle", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -13931,7 +13931,7 @@ ], "submission" : "2548", "Strain" : "NC1293", - "label" : "total-RNA;NC1293;Mixed stage of Embryos;25 degree celsius;pharyngeal muscle;RNA-tiling-array", + "label" : "total-RNA;NC1293;Mixed stage of Embryos;25 degree celsius;Pharyngeal muscle;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -13969,7 +13969,7 @@ }, { "technique" : "CNV-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -13984,7 +13984,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2551", - "label" : "Replication-Copy-Number;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;CNV-seq", + "label" : "Replication-Copy-Number;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;CNV-seq", "category" : "Copy Number Variation", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -13992,7 +13992,7 @@ }, { "technique" : "CNV-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -14007,7 +14007,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2552", - "label" : "Replication-Copy-Number;Kc167;Late Embryonic stage;embryo-derived cell-line;CNV-seq", + "label" : "Replication-Copy-Number;Kc167;Late Embryonic stage;Embryo-derived cell-line;CNV-seq", "category" : "Copy Number Variation", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -14349,7 +14349,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "GAF", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", @@ -14364,7 +14364,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2568", - "label" : "GAF;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "GAF;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -14477,7 +14477,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "Hairy", + "factor" : "hairy", "target" : "Transcriptional Factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -14490,7 +14490,7 @@ "fly/White_CC_SG_TRANSFACT/E0-8h_h" ], "submission" : "2574", - "label" : "Hairy;Embryos 0-8 hr;ChIP-chip", + "label" : "hairy;Embryos 0-8 hr;ChIP-chip", "category" : "TF binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 0-8 hr", @@ -14561,7 +14561,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "Enhancer of zeste", + "factor" : "Enhancer-of-zeste", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", "Tracks" : [ @@ -14574,7 +14574,7 @@ "fly_ananas/White_AGILENT_SG/ISO1_8-16_Ez_COMBINED" ], "submission" : "2585", - "label" : "Enhancer of zeste;Embryos 8-16 hr;ChIP-chip", + "label" : "Enhancer-of-zeste;Embryos 8-16 hr;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Embryos 8-16 hr", @@ -14582,13 +14582,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "2586", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -14596,13 +14596,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "2592", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -14610,13 +14610,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "2593", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -14664,10 +14664,10 @@ ], "submission" : "2598", "Strain" : "OP37", - "label" : "PHA-4;OP37;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "PHA-4;OP37;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "TF binding sites", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -14768,7 +14768,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "ovary", + "Tissue" : "Ovary", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -14790,7 +14790,7 @@ ], "Cell-Line" : "OvarySomaticSheet", "submission" : "2605", - "label" : "small-RNA;OvarySomaticSheet;Adult stage;ovary;RNA-seq", + "label" : "small-RNA;OvarySomaticSheet;Adult stage;Ovary;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Adult stage", @@ -14798,7 +14798,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -14820,7 +14820,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2606", - "label" : "small-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -14828,7 +14828,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -14850,7 +14850,7 @@ ], "Cell-Line" : "S2R+", "submission" : "2608", - "label" : "small-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -14938,10 +14938,10 @@ ], "submission" : "2620", "Strain" : "OP120", - "label" : "CEH-30;OP120;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "CEH-30;OP120;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "TF binding sites", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -15233,7 +15233,7 @@ }, { "technique" : "ChIP-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", @@ -15248,7 +15248,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2638", - "label" : "CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq", + "label" : "CTCF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15256,7 +15256,7 @@ }, { "technique" : "ChIP-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "White, K.", @@ -15271,7 +15271,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2639", - "label" : "CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq", + "label" : "CTCF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-seq", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15306,10 +15306,10 @@ ], "submission" : "2641", "Strain" : "EcR-GFP", - "label" : "eGFP;EcR-GFP;Pupae, White prepupae (WPP) 10-11 hr;ChIP-seq", + "label" : "eGFP;EcR-GFP;White prepupae (WPP) 10-11 hr;ChIP-seq", "category" : "TF binding sites", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) 10-11 hr", + "Developmental-Stage" : "White prepupae (WPP) 10-11 hr", "organism" : "D. melanogaster" }, { @@ -15328,10 +15328,10 @@ ], "submission" : "2642", "Strain" : "EcR-GFP", - "label" : "eGFP;EcR-GFP;DevStageFly;ChIP-seq", + "label" : "eGFP;EcR-GFP;White prepupae (WPP) 30-33 hr;ChIP-seq", "category" : "TF binding sites", "type" : "data set", - "Developmental-Stage" : "DevStageFly", + "Developmental-Stage" : "White prepupae (WPP) 30-33 hr", "organism" : "D. melanogaster" }, { @@ -15375,7 +15375,7 @@ { "technique" : "ChIP-chip", "Tissue" : "CNS-derived cell-line", - "factor" : "Ez", + "factor" : "Enhancer-of-zeste", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -15389,7 +15389,7 @@ ], "Cell-Line" : "ML-DmBG3-c2", "submission" : "2650", - "label" : "Ez;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", + "label" : "Enhancer-of-zeste;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -15488,7 +15488,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -15503,7 +15503,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2655", - "label" : "H3K4me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15555,7 +15555,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K79me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -15570,7 +15570,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2658", - "label" : "H3K79me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K79me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15601,7 +15601,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9acS10P", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -15616,7 +15616,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2660", - "label" : "H3K9acS10P;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9acS10P;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15759,7 +15759,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "HP1a", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15774,7 +15774,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "2667", - "label" : "HP1a;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "HP1a;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -15782,7 +15782,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1a", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15797,7 +15797,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2668", - "label" : "HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1a;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15805,7 +15805,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "HP1c", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15820,7 +15820,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "2669", - "label" : "HP1c;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "HP1c;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -15828,7 +15828,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1c", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15843,7 +15843,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2670", - "label" : "HP1c;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1c;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15874,7 +15874,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(var)3-7", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15889,7 +15889,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2672", - "label" : "Su(var)3-7;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(var)3-7;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15897,7 +15897,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(var)3-9", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15912,7 +15912,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2673", - "label" : "Su(var)3-9;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(var)3-9;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -15920,7 +15920,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "mod(mdg4)", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -15935,7 +15935,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2674", - "label" : "mod(mdg4);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "mod(mdg4);S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16207,7 +16207,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -16229,7 +16229,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "2721", - "label" : "small-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -16237,7 +16237,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -16259,7 +16259,7 @@ ], "Cell-Line" : "S2-Rubin", "submission" : "2725", - "label" : "small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16304,10 +16304,10 @@ "principal_investigator" : "Waterston, R.", "submission" : "2730", "Strain" : "spe-9(hc88)", - "label" : "small-RNA;spe-9(hc88);Young adult DAY0post-L4 molt stage larvae;23 degree celsius;RNA-seq", + "label" : "small-RNA;spe-9(hc88);Young adult DAY0 post-L4 molt stage larvae;23 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Young adult DAY0post-L4 molt stage larvae", + "Developmental-Stage" : "Young adult DAY0 post-L4 molt stage larvae", "organism" : "C. elegans", "temperature" : "23 degree celsius" }, @@ -16610,7 +16610,7 @@ }, { "technique" : "ChIP-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ORC2", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -16625,7 +16625,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2753", - "label" : "ORC2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq", + "label" : "ORC2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16656,7 +16656,7 @@ }, { "technique" : "ChIP-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ORC2", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -16671,7 +16671,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2755", - "label" : "ORC2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-seq", + "label" : "ORC2;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16679,7 +16679,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "600 mM salt", "target" : "Chromatin Structure", @@ -16697,7 +16697,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Kc167", "submission" : "2756", - "label" : "Nucleosome;600 mM salt;1 to 2 hours;soluble fraction;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;600 mM salt;1 to 2 hours;soluble fraction;Kc167;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16705,7 +16705,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "600 mM salt", "target" : "Chromatin Structure", @@ -16723,7 +16723,7 @@ "extract" : "precipitate", "Cell-Line" : "Kc167", "submission" : "2757", - "label" : "Nucleosome;600 mM salt;1 to 2 hours;precipitate;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;600 mM salt;1 to 2 hours;precipitate;Kc167;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16731,7 +16731,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PolyA-RNA", "target" : "mRNA", "principal_investigator" : "Henikoff, S.", @@ -16746,7 +16746,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2758", - "label" : "PolyA-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "PolyA-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16754,7 +16754,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "600 mM salt", "target" : "Chromatin Structure", @@ -16772,7 +16772,7 @@ "extract" : "soluble fraction", "Cell-Line" : "Kc167", "submission" : "2759", - "label" : "Nucleosome;600 mM salt;1 to 2 hours;soluble fraction;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;600 mM salt;1 to 2 hours;soluble fraction;Kc167;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16780,7 +16780,7 @@ }, { "technique" : "DNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Nucleosome", "Compound" : "600 mM salt", "target" : "Chromatin Structure", @@ -16798,7 +16798,7 @@ "extract" : "precipitate", "Cell-Line" : "Kc167", "submission" : "2760", - "label" : "Nucleosome;600 mM salt;1 to 2 hours;precipitate;Kc167;Late Embryonic stage;embryo-derived cell-line;DNA-tiling-array", + "label" : "Nucleosome;600 mM salt;1 to 2 hours;precipitate;Kc167;Late Embryonic stage;Embryo-derived cell-line;DNA-tiling-array", "category" : "Chromatin structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16807,7 +16807,7 @@ { "technique" : "RNA-tiling-array", "synthetic-RNA" : "CG5499-RNAi", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PolyA-RNA", "target" : "mRNA", "principal_investigator" : "Henikoff, S.", @@ -16822,7 +16822,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2761", - "label" : "PolyA-RNA;Kc167;CG5499-RNAi;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "PolyA-RNA;Kc167;CG5499-RNAi;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -16912,14 +16912,14 @@ }, { "technique" : "ChIP-chip", - "factor" : "cbp", + "factor" : "CtBP", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_CHR_CPB1" ], "submission" : "2767", - "label" : "cbp;Mixed Embryos;20 degree celsius;ChIP-chip", + "label" : "CtBP;Mixed Embryos;20 degree celsius;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -16944,7 +16944,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PolyA-RNA", "target" : "mRNA", "principal_investigator" : "Henikoff, S.", @@ -16959,7 +16959,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2769", - "label" : "PolyA-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-tiling-array", + "label" : "PolyA-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17138,7 +17138,7 @@ }, { "technique" : "ChIP-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MCM2-7", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -17153,7 +17153,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2783", - "label" : "MCM2-7;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-seq", + "label" : "MCM2-7;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17182,10 +17182,10 @@ "principal_investigator" : "Waterston, R.", "submission" : "2785", "Strain" : "spe-9(hc88)", - "label" : "small-RNA;spe-9(hc88);Young adult DAY0post-L4 molt stage larvae;23 degree celsius;RNA-seq", + "label" : "small-RNA;spe-9(hc88);Young adult DAY0 post-L4 molt stage larvae;23 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Young adult DAY0post-L4 molt stage larvae", + "Developmental-Stage" : "Young adult DAY0 post-L4 molt stage larvae", "organism" : "C. elegans", "temperature" : "23 degree celsius" }, @@ -17233,7 +17233,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "ventral prothoracic disc", + "Tissue" : "Ventral prothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -17255,7 +17255,7 @@ ], "Cell-Line" : "CME-L1", "submission" : "2820", - "label" : "small-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-seq", + "label" : "small-RNA;CME-L1;Larvae 3rd instar;Ventral prothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -17297,7 +17297,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "spermatids", + "Tissue" : "Spermatids", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Piano, F.", @@ -17306,7 +17306,7 @@ ], "submission" : "2823", "Strain" : "him-8(e1489)", - "label" : "small-RNA;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;25 degree celsius;spermatids;RNA-seq", + "label" : "small-RNA;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;25 degree celsius;Spermatids;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Adult Males 70 hr post-L1 stage larvae", @@ -17383,7 +17383,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "spermatids", + "Tissue" : "Spermatids", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Piano, F.", @@ -17392,7 +17392,7 @@ ], "submission" : "2829", "Strain" : "him-8(e1489)", - "label" : "small-RNA;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;25 degree celsius;spermatids;RNA-seq", + "label" : "small-RNA;him-8(e1489);Adult Males 70 hr post-L1 stage larvae;25 degree celsius;Spermatids;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Adult Males 70 hr post-L1 stage larvae", @@ -17401,7 +17401,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "unfertilized oocytes", + "Tissue" : "Unfertilized oocytes", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Piano, F.", @@ -17410,7 +17410,7 @@ ], "submission" : "2830", "Strain" : "BA1", - "label" : "small-RNA;BA1;Adult Males 70 hr post-L1 stage larvae;25 degree celsius;unfertilized oocytes;RNA-seq", + "label" : "small-RNA;BA1;Adult Males 70 hr post-L1 stage larvae;25 degree celsius;Unfertilized oocytes;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Adult Males 70 hr post-L1 stage larvae", @@ -17436,7 +17436,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "unfertilized oocytes", + "Tissue" : "Unfertilized oocytes", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Piano, F.", @@ -17445,7 +17445,7 @@ ], "submission" : "2832", "Strain" : "BA1", - "label" : "small-RNA;BA1;Adult Males 70 hr post-L1 stage larvae;25 degree celsius;unfertilized oocytes;RNA-seq", + "label" : "small-RNA;BA1;Adult Males 70 hr post-L1 stage larvae;25 degree celsius;Unfertilized oocytes;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Adult Males 70 hr post-L1 stage larvae", @@ -17498,10 +17498,10 @@ ], "submission" : "2896", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Female eclosion + 30 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 30 days", + "Developmental-Stage" : "Adult Female, eclosion + 30 days", "organism" : "D. melanogaster" }, { @@ -17520,10 +17520,10 @@ ], "submission" : "2897", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Male eclosion + 30 days;RNA-tiling-array", + "label" : "total-RNA;Y cn bw sp;Adult Male, eclosion + 30 days;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 30 days", + "Developmental-Stage" : "Adult Male, eclosion + 30 days", "organism" : "D. melanogaster" }, { @@ -17660,7 +17660,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -17682,7 +17682,7 @@ ], "Cell-Line" : "S2-Rubin", "submission" : "2973", - "label" : "small-RNA;S2-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17690,7 +17690,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -17712,7 +17712,7 @@ ], "Cell-Line" : "Kc-Rubin", "submission" : "2974", - "label" : "small-RNA;Kc-Rubin;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;Kc-Rubin;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17781,7 +17781,7 @@ { "read-length" : "36 base pair", "technique" : "ChIP-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MCM2-7", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -17796,7 +17796,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2979", - "label" : "MCM2-7;36 base pair;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-seq", + "label" : "MCM2-7;36 base pair;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17810,15 +17810,15 @@ "principal_investigator" : "Oliver, B.", "submission" : "2980", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Female;Dpse Female heads;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Female;Dpse Female heads;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Female", + "Developmental-Stage" : "Adult Female", "organism" : "D. pseudoobscura" }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ASH-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -17833,7 +17833,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2984", - "label" : "ASH-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ASH-1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17865,7 +17865,7 @@ { "technique" : "ChIP-chip", "Tissue" : "CNS-derived cell-line", - "factor" : "E(Z)", + "factor" : "Enhancer-of-zeste", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -17879,7 +17879,7 @@ ], "Cell-Line" : "ML-DmBG3-c2", "submission" : "2987", - "label" : "E(Z);ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", + "label" : "Enhancer-of-zeste;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -17887,8 +17887,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "E(Z)", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Enhancer-of-zeste", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -17902,7 +17902,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2988", - "label" : "E(Z);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Enhancer-of-zeste;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -17910,7 +17910,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "H2AV", + "factor" : "H2Av", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -17924,7 +17924,7 @@ ], "submission" : "2989", "Strain" : "Oregon-R", - "label" : "H2AV;Oregon-R;Embryos 14-16 hr OR;ChIP-chip", + "label" : "H2Av;Oregon-R;Embryos 14-16 hr OR;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Embryos 14-16 hr OR", @@ -17932,7 +17932,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "H2AV", + "factor" : "H2Av", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -17946,7 +17946,7 @@ ], "submission" : "2990", "Strain" : "Oregon-R", - "label" : "H2AV;Oregon-R;Embryos 2-4 hr OR;ChIP-chip", + "label" : "H2Av;Oregon-R;Embryos 2-4 hr OR;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Embryos 2-4 hr OR", @@ -17954,8 +17954,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "H2AV", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -17969,7 +17969,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "2991", - "label" : "H2AV;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H2Av;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18021,7 +18021,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H2Bubi", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18036,7 +18036,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "2994", - "label" : "H2Bubi;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H2Bubi;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18066,7 +18066,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K18ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18081,7 +18081,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2996", - "label" : "H3K18ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K18ac;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18111,7 +18111,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K23ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18126,7 +18126,7 @@ ], "Cell-Line" : "Kc167", "submission" : "2998", - "label" : "H3K23ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K23ac;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18157,7 +18157,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18172,7 +18172,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3000", - "label" : "H3K27me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18202,7 +18202,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K36me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18217,7 +18217,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3002", - "label" : "H3K36me1;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K36me1;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18225,7 +18225,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K36me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18240,7 +18240,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3003", - "label" : "H3K36me1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K36me1;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18248,7 +18248,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K36me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18263,7 +18263,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3004", - "label" : "H3K36me3;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K36me3;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18316,7 +18316,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18331,7 +18331,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3007", - "label" : "H3K9ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9ac;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18361,7 +18361,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9acS10P", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18376,7 +18376,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3009", - "label" : "H3K9acS10P;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9acS10P;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18384,7 +18384,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H3K9acS10P", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18399,7 +18399,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3010", - "label" : "H3K9acS10P;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H3K9acS10P;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18407,7 +18407,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18422,7 +18422,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3011", - "label" : "H3K9me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18452,7 +18452,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18467,7 +18467,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3013", - "label" : "H3K9me3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me3;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18475,7 +18475,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K20me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -18490,7 +18490,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3014", - "label" : "H4K20me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K20me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18543,7 +18543,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "HP1b", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18558,7 +18558,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3017", - "label" : "HP1b;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "HP1b;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18588,7 +18588,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1b", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18603,7 +18603,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3019", - "label" : "HP1b;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1b;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18611,7 +18611,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1b", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18626,7 +18626,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3020", - "label" : "HP1b;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1b;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18767,7 +18767,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "HP2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18782,7 +18782,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3027", - "label" : "HP2;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "HP2;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18812,7 +18812,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18827,7 +18827,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3029", - "label" : "HP2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP2;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18858,7 +18858,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ISWI", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18873,7 +18873,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3031", - "label" : "ISWI;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ISWI;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18881,7 +18881,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ISWI", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18896,7 +18896,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3032", - "label" : "ISWI;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ISWI;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18949,7 +18949,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "JIL-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18964,7 +18964,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3036", - "label" : "JIL-1;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "JIL-1;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -18972,7 +18972,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "JIL-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -18987,7 +18987,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3037", - "label" : "JIL-1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "JIL-1;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -18995,7 +18995,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "JIL-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19010,7 +19010,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3038", - "label" : "JIL-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "JIL-1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19018,7 +19018,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MBD-R2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19033,7 +19033,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3039", - "label" : "MBD-R2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MBD-R2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19041,7 +19041,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MLE", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19056,7 +19056,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3040", - "label" : "MLE;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MLE;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19087,7 +19087,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "MOF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19102,7 +19102,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3042", - "label" : "MOF;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "MOF;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -19110,7 +19110,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MOF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19125,7 +19125,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3043", - "label" : "MOF;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MOF;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19133,7 +19133,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MOF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19148,7 +19148,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3044", - "label" : "MOF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MOF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19179,7 +19179,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MRG15", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19194,7 +19194,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3046", - "label" : "MRG15;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MRG15;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19202,7 +19202,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MRG15", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19217,7 +19217,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3047", - "label" : "MRG15;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MRG15;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19225,7 +19225,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "NURF301", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19240,7 +19240,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3048", - "label" : "NURF301;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "NURF301;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19248,7 +19248,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PCL", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19263,7 +19263,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3049", - "label" : "PCL;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "PCL;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19271,7 +19271,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "PIWI", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19286,7 +19286,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3050", - "label" : "PIWI;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "PIWI;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -19361,7 +19361,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PR-Set7", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19376,7 +19376,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3054", - "label" : "PR-Set7;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "PR-Set7;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19407,7 +19407,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Psc", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19422,7 +19422,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3056", - "label" : "Psc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Psc;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19430,7 +19430,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "RPD3", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19445,7 +19445,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3057", - "label" : "RPD3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RPD3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19453,7 +19453,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "SPT16", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19468,7 +19468,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3058", - "label" : "SPT16;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "SPT16;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19498,7 +19498,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(var)3-7", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19513,7 +19513,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3060", - "label" : "Su(var)3-7;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(var)3-7;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19521,7 +19521,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(var)3-9", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19536,7 +19536,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3061", - "label" : "Su(var)3-9;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(var)3-9;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19544,7 +19544,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "WDS", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -19559,7 +19559,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3062", - "label" : "WDS;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "WDS;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19615,10 +19615,10 @@ ], "submission" : "3068", "Strain" : "OP500", - "label" : "CEH-26;OP500;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "CEH-26;OP500;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "TF binding sites", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -19809,10 +19809,10 @@ ], "submission" : "3083", "Strain" : "Oregon-R", - "label" : "total-RNA;Oregon-R;Dmel Adult Female 8 days;Dmel Female heads;RNA-seq", + "label" : "total-RNA;Oregon-R;Adult Female 8 days;Dmel Female heads;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dmel Adult Female 8 days", + "Developmental-Stage" : "Adult Female 8 days", "organism" : "D. melanogaster" }, { @@ -19832,10 +19832,10 @@ ], "submission" : "3084", "Strain" : "Oregon-R", - "label" : "total-RNA;Oregon-R;Dmel Adult Male 8 days;Dmel Male heads;RNA-seq", + "label" : "total-RNA;Oregon-R;Adult Male 8 days;Dmel Male heads;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dmel Adult Male 8 days", + "Developmental-Stage" : "Adult Male 8 days", "organism" : "D. melanogaster" }, { @@ -19846,10 +19846,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3085", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Male;Dpse Male heads;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Male;Dpse Male heads;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Male", + "Developmental-Stage" : "Adult Male", "organism" : "D. pseudoobscura" }, { @@ -19860,10 +19860,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3086", "Strain" : "Dmojavensis", - "label" : "total-RNA;Dmojavensis;Dmoj Adult Male;Dmoj Male heads;RNA-seq", + "label" : "total-RNA;Dmojavensis;Adult Male;Dmoj Male heads;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dmoj Adult Male", + "Developmental-Stage" : "Adult Male", "organism" : "D. mojavensis" }, { @@ -19874,15 +19874,15 @@ "principal_investigator" : "Oliver, B.", "submission" : "3087", "Strain" : "Dmojavensis", - "label" : "total-RNA;Dmojavensis;Dmoj Adult Female;Dmoj Female heads;RNA-seq", + "label" : "total-RNA;Dmojavensis;Adult Female;Dmoj Female heads;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dmoj Adult Female", + "Developmental-Stage" : "Adult Female", "organism" : "D. mojavensis" }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG10128-RNAi", "target" : "mRNA", @@ -19898,7 +19898,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3089", - "label" : "total-RNA;CG10128-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG10128-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19906,7 +19906,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG9373-RNAi", "target" : "mRNA", @@ -19922,7 +19922,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3090", - "label" : "total-RNA;CG9373-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG9373-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19930,7 +19930,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8781-RNAi", "target" : "mRNA", @@ -19946,7 +19946,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3091", - "label" : "total-RNA;CG8781-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8781-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19954,7 +19954,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8636-RNAi", "target" : "mRNA", @@ -19970,7 +19970,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3092", - "label" : "total-RNA;CG8636-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8636-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -19978,7 +19978,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG7437-RNAi", "target" : "mRNA", @@ -19994,7 +19994,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3093", - "label" : "total-RNA;CG7437-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG7437-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20002,7 +20002,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG6779-RNAi", "target" : "mRNA", @@ -20018,7 +20018,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3094", - "label" : "total-RNA;CG6779-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG6779-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20026,7 +20026,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG6227-RNAi", "target" : "mRNA", @@ -20042,7 +20042,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3095", - "label" : "total-RNA;CG6227-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG6227-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20050,7 +20050,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5655-RNAi", "target" : "mRNA", @@ -20066,7 +20066,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3096", - "label" : "total-RNA;CG5655-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5655-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20074,7 +20074,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG33106-RNAi", "target" : "mRNA", @@ -20090,7 +20090,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3097", - "label" : "total-RNA;CG33106-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG33106-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20098,7 +20098,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG32423-RNAi", "target" : "mRNA", @@ -20114,7 +20114,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3098", - "label" : "total-RNA;CG32423-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG32423-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20122,7 +20122,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG17838-RNAi", "target" : "mRNA", @@ -20138,7 +20138,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3099", - "label" : "total-RNA;CG17838-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG17838-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20146,7 +20146,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG1101-RNAi", "target" : "mRNA", @@ -20162,7 +20162,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3100", - "label" : "total-RNA;CG1101-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG1101-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20170,7 +20170,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG10203-RNAi", "target" : "mRNA", @@ -20186,7 +20186,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3101", - "label" : "total-RNA;CG10203-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG10203-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20194,7 +20194,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8749-RNAi", "target" : "mRNA", @@ -20210,7 +20210,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3102", - "label" : "total-RNA;CG8749-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8749-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20218,7 +20218,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5821-RNAi", "target" : "mRNA", @@ -20234,7 +20234,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3103", - "label" : "total-RNA;CG5821-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5821-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20242,7 +20242,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5170-RNAi", "target" : "mRNA", @@ -20258,7 +20258,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3104", - "label" : "total-RNA;CG5170-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5170-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20266,7 +20266,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG4602-RNAi", "target" : "mRNA", @@ -20282,7 +20282,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3105", - "label" : "total-RNA;CG4602-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG4602-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20290,7 +20290,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG6841-RNAi", "target" : "mRNA", @@ -20306,7 +20306,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3106", - "label" : "total-RNA;CG6841-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG6841-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20314,7 +20314,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG6203-RNAi", "target" : "mRNA", @@ -20330,7 +20330,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3107", - "label" : "total-RNA;CG6203-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG6203-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20338,7 +20338,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5422-RNAi", "target" : "mRNA", @@ -20354,7 +20354,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3108", - "label" : "total-RNA;CG5422-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5422-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20362,7 +20362,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8912-RNAi", "target" : "mRNA", @@ -20378,7 +20378,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3109", - "label" : "total-RNA;CG8912-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8912-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20386,7 +20386,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8241-RNAi", "target" : "mRNA", @@ -20402,7 +20402,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3110", - "label" : "total-RNA;CG8241-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8241-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20410,7 +20410,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG16901-RNAi", "target" : "mRNA", @@ -20426,7 +20426,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3111", - "label" : "total-RNA;CG16901-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG16901-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20434,7 +20434,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG13425-RNAi", "target" : "mRNA", @@ -20450,7 +20450,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3112", - "label" : "total-RNA;CG13425-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG13425-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20458,7 +20458,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG10279-RNAi", "target" : "mRNA", @@ -20474,7 +20474,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3113", - "label" : "total-RNA;CG10279-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG10279-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20482,7 +20482,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG6049-RNAi", "target" : "mRNA", @@ -20498,7 +20498,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3114", - "label" : "total-RNA;CG6049-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG6049-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20506,7 +20506,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG3312-RNAi", "target" : "mRNA", @@ -20522,7 +20522,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3115", - "label" : "total-RNA;CG3312-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG3312-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20530,7 +20530,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG31716-RNAi", "target" : "mRNA", @@ -20546,7 +20546,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3116", - "label" : "total-RNA;CG31716-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG31716-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20554,7 +20554,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG30122-RNAi", "target" : "mRNA", @@ -20570,7 +20570,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3117", - "label" : "total-RNA;CG30122-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG30122-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20578,7 +20578,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG11266-RNAi", "target" : "mRNA", @@ -20594,7 +20594,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3118", - "label" : "total-RNA;CG11266-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG11266-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20602,7 +20602,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG8019-RNAi", "target" : "mRNA", @@ -20618,7 +20618,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3119", - "label" : "total-RNA;CG8019-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG8019-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20626,7 +20626,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG7971-RNAi", "target" : "mRNA", @@ -20642,7 +20642,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3120", - "label" : "total-RNA;CG7971-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG7971-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20650,7 +20650,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG4816-RNAi", "target" : "mRNA", @@ -20666,7 +20666,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3121", - "label" : "total-RNA;CG4816-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG4816-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20674,7 +20674,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG3584-RNAi", "target" : "mRNA", @@ -20690,7 +20690,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3122", - "label" : "total-RNA;CG3584-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG3584-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20698,7 +20698,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG1646-RNAi", "target" : "mRNA", @@ -20714,7 +20714,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3123", - "label" : "total-RNA;CG1646-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG1646-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20722,7 +20722,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG10851-RNAi", "target" : "mRNA", @@ -20738,7 +20738,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3124", - "label" : "total-RNA;CG10851-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG10851-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20746,7 +20746,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5099-RNAi", "target" : "mRNA", @@ -20762,7 +20762,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3125", - "label" : "total-RNA;CG5099-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5099-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20770,7 +20770,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG4760-RNAi", "target" : "mRNA", @@ -20786,7 +20786,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3126", - "label" : "total-RNA;CG4760-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG4760-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20794,7 +20794,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG18350-RNAi", "target" : "mRNA", @@ -20810,7 +20810,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3127", - "label" : "total-RNA;CG18350-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG18350-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20818,7 +20818,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG16788-RNAi", "target" : "mRNA", @@ -20834,7 +20834,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3128", - "label" : "total-RNA;CG16788-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG16788-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20842,7 +20842,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG1559-RNAi", "target" : "mRNA", @@ -20858,7 +20858,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3129", - "label" : "total-RNA;CG1559-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG1559-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20866,7 +20866,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG10377-RNAi", "target" : "mRNA", @@ -20882,7 +20882,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3130", - "label" : "total-RNA;CG10377-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG10377-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20890,7 +20890,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG9412-RNAi", "target" : "mRNA", @@ -20906,7 +20906,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3131", - "label" : "total-RNA;CG9412-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG9412-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20914,7 +20914,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG6946-RNAi", "target" : "mRNA", @@ -20930,7 +20930,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3132", - "label" : "total-RNA;CG6946-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG6946-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20938,7 +20938,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG1987-RNAi", "target" : "mRNA", @@ -20954,7 +20954,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3133", - "label" : "total-RNA;CG1987-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG1987-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20962,7 +20962,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG9983-RNAi", "target" : "mRNA", @@ -20978,7 +20978,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3134", - "label" : "total-RNA;CG9983-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG9983-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -20986,7 +20986,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5442-RNAi", "target" : "mRNA", @@ -21002,7 +21002,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3135", - "label" : "total-RNA;CG5442-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5442-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21010,7 +21010,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG31000-RNAi", "target" : "mRNA", @@ -21026,7 +21026,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3136", - "label" : "total-RNA;CG31000-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG31000-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21034,7 +21034,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG17136-RNAi", "target" : "mRNA", @@ -21050,7 +21050,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3137", - "label" : "total-RNA;CG17136-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG17136-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21058,7 +21058,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "Untreated-(RNAi-control)", "target" : "mRNA", @@ -21074,7 +21074,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3138", - "label" : "total-RNA;Untreated-(RNAi-control);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Untreated-(RNAi-control);S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21082,7 +21082,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG4878-RNAi", "target" : "mRNA", @@ -21098,7 +21098,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3139", - "label" : "total-RNA;CG4878-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG4878-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21106,7 +21106,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG4262-RNAi", "target" : "mRNA", @@ -21122,7 +21122,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3140", - "label" : "total-RNA;CG4262-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG4262-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21130,7 +21130,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG18426-RNAi", "target" : "mRNA", @@ -21146,7 +21146,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3141", - "label" : "total-RNA;CG18426-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG18426-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21154,7 +21154,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG12749-RNAi", "target" : "mRNA", @@ -21170,7 +21170,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3142", - "label" : "total-RNA;CG12749-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG12749-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21178,7 +21178,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG7878-RNAi", "target" : "mRNA", @@ -21194,7 +21194,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3143", - "label" : "total-RNA;CG7878-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG7878-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21202,7 +21202,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG5836-RNAi", "target" : "mRNA", @@ -21218,7 +21218,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3144", - "label" : "total-RNA;CG5836-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG5836-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21226,7 +21226,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG3249-RNAi", "target" : "mRNA", @@ -21242,7 +21242,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3145", - "label" : "total-RNA;CG3249-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG3249-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21250,7 +21250,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "CG10328-RNAi", "target" : "mRNA", @@ -21266,7 +21266,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3146", - "label" : "total-RNA;CG10328-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;CG10328-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21348,8 +21348,7 @@ "worm/LIEB_WIG_CHIPCHIP_CHR_IGG/AB46540_NIGG_N2_MXEMB" ], "submission" : "3153", - "Strain" : "Ab:AB46540 NIgG:JL:1", - "label" : "IgG control;Ab:AB46540 NIgG:JL:1;Mixed Embryos;20 degree celsius;ChIP-chip", + "label" : "IgG control;Mixed Embryos;20 degree celsius;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -21565,7 +21564,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K36me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -21580,7 +21579,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3170", - "label" : "H3K36me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K36me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -21604,7 +21603,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "reference (early embryo)", + "Tissue" : "Reference (early embryo)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -21613,7 +21612,7 @@ ], "submission" : "3172", "Strain" : "N2", - "label" : "total-RNA;N2;Mixed stage of Embryos;20 degree celsius;reference (early embryo);RNA-tiling-array", + "label" : "total-RNA;N2;Mixed stage of Embryos;20 degree celsius;Reference (early embryo);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", @@ -21622,7 +21621,7 @@ }, { "technique" : "RNA-tiling-array", - "Tissue" : "embryo-AVE", + "Tissue" : "Embryo-AVE", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -21631,13 +21630,29 @@ ], "submission" : "3173", "Strain" : "NC1750", - "label" : "total-RNA;NC1750;Mixed stage of Embryos;20 degree celsius;embryo-AVE;RNA-tiling-array", + "label" : "total-RNA;NC1750;Mixed stage of Embryos;20 degree celsius;Embryo-AVE;RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Mixed stage of Embryos", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-chip", + "factor" : "H3K36ac", + "target" : "Histone Modification", + "principal_investigator" : "Lieb, J.", + "Tracks" : [ + "worm/LIEB_WIG_CHIPCHIP_H3K36/AM39379_H3K36AC29108001_N2_EEMB" + ], + "submission" : "3178", + "label" : "H3K36ac;Early Embryos;20 degree celsius;ChIP-chip", + "category" : "Histone modification and replacement", + "type" : "data set", + "Developmental-Stage" : "Early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-chip", "factor" : "H3K27me1", @@ -21734,7 +21749,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -21756,7 +21771,7 @@ ], "Cell-Line" : "ML-DmD21", "submission" : "3193", - "label" : "small-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;ML-DmD21;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -21801,10 +21816,10 @@ "worm/LIEB_WIG_CHIPCHIP_H4/DISN147_H4K20ME1001_N2_LTEMB" ], "submission" : "3196", - "label" : "H4K20me1;Late Embryos;20 degree celsius;ChIP-chip", + "label" : "H4K20me1;Late Embryonic stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -21874,7 +21889,7 @@ }, { "technique" : "CNV-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "Replication-Copy-Number", "target" : "Copy Number Variation", "principal_investigator" : "MacAlpine, D.", @@ -21889,7 +21904,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3201", - "label" : "Replication-Copy-Number;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;CNV-seq", + "label" : "Replication-Copy-Number;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;CNV-seq", "category" : "Copy Number Variation", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -21968,8 +21983,7 @@ "worm/LIEB_WIG_CHIPCHIP_COREHIS/AB1791_H3_N2_L3" ], "submission" : "3206", - "Strain" : "Ab:AB1791 H3 :JL:1", - "label" : "H3;Ab:AB1791 H3 :JL:1;Larvae L3 stage;20 degree celsius;ChIP-chip", + "label" : "H3;Larvae L3 stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae L3 stage", @@ -22410,7 +22424,7 @@ "read-length" : "36 base pair", "devstage" : "DevStage:Mixed Embryos 0-24h:SC:1", "technique" : "ChIP-seq", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", "Tracks" : [ @@ -22423,7 +22437,7 @@ "fly_dp/MacAlpine_CHIPSEQ_TISSUES" ], "submission" : "3251", - "label" : "pol2;36 base pair;DevStage:Mixed Embryos 0-24h:SC:1;Mixed Embryos 0-24 hr;ChIP-seq", + "label" : "RNA polymerase II;36 base pair;DevStage:Mixed Embryos 0-24h:SC:1;Mixed Embryos 0-24 hr;ChIP-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Mixed Embryos 0-24 hr", @@ -22433,7 +22447,7 @@ "technique" : "ChIP-seq", "whole-organism" : "FlyStrain:SuUR---Orr-Weaver:DM:1", "base pair" : "36 base pair", - "Tissue" : "salivary glands", + "Tissue" : "Salivary glands", "factor" : "ORC2", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -22448,7 +22462,7 @@ ], "submission" : "3253", "Strain" : "SuUR - Orr-Weaver", - "label" : "ORC2;FlyStrain:SuUR---Orr-Weaver:DM:1;SuUR - Orr-Weaver;L3 stage wandering stage larvae;36 base pair;salivary glands;ChIP-seq", + "label" : "ORC2;FlyStrain:SuUR---Orr-Weaver:DM:1;SuUR - Orr-Weaver;L3 stage wandering stage larvae;36 base pair;Salivary glands;ChIP-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -22473,13 +22487,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "3263", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22487,13 +22501,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryonic/larval hemocyte", + "Tissue" : "Embryonic/larval hemocyte", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Cell-Line" : "Mbn2", + "Cell-Line" : "mbn2", "submission" : "3265", - "label" : "total-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq", + "label" : "total-RNA;mbn2;Late Embryonic stage;Embryonic/larval hemocyte;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22501,13 +22515,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S3", "submission" : "3273", - "label" : "total-RNA;S3;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S3;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22578,7 +22592,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -22593,7 +22607,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3281", - "label" : "CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CTCF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22601,8 +22615,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "H2AV", + "Tissue" : "Embryo-derived cell-line", + "factor" : "H2Av", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -22616,7 +22630,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3282", - "label" : "H2AV;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H2Av;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22624,7 +22638,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H2BK5ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -22639,7 +22653,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3283", - "label" : "H2BK5ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H2BK5ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22714,7 +22728,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K20me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -22729,7 +22743,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3287", - "label" : "H4K20me1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K20me1;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22737,7 +22751,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "H4K8ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -22752,7 +22766,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3288", - "label" : "H4K8ac;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;ChIP-chip", + "label" : "H4K8ac;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -22760,7 +22774,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4K8ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -22775,7 +22789,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3289", - "label" : "H4K8ac;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4K8ac;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22805,7 +22819,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1c", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -22820,7 +22834,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3291", - "label" : "HP1c;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1c;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22850,7 +22864,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MSL-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -22865,7 +22879,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3293", - "label" : "MSL-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MSL-1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22873,7 +22887,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "POF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -22888,7 +22902,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3294", - "label" : "POF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "POF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22896,8 +22910,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "pol2", + "Tissue" : "Embryo-derived cell-line", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -22911,7 +22925,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3295", - "label" : "pol2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RNA polymerase II;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22919,7 +22933,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "RPD3", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -22934,7 +22948,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3296", - "label" : "RPD3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RPD3;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -22987,7 +23001,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -23002,7 +23016,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3300", - "label" : "H1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23010,7 +23024,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -23025,7 +23039,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3301", - "label" : "H3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23079,7 +23093,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H4", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -23094,7 +23108,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3304", - "label" : "H4;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H4;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23102,7 +23116,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -23124,7 +23138,7 @@ ], "Cell-Line" : "GM2", "submission" : "3307", - "label" : "small-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;GM2;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23132,7 +23146,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -23154,7 +23168,7 @@ ], "Cell-Line" : "ML-DmD16-c3", "submission" : "3309", - "label" : "small-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -23162,7 +23176,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "antenna disc-derived cell-line", + "Tissue" : "Antenna disc-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -23184,7 +23198,7 @@ ], "Cell-Line" : "ML-DmD20-c5", "submission" : "3310", - "label" : "small-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-seq", + "label" : "small-RNA;ML-DmD20-c5;Larvae 3rd instar;Antenna disc-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -23192,7 +23206,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -23214,7 +23228,7 @@ ], "Cell-Line" : "S1", "submission" : "3311", - "label" : "small-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S1;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23305,7 +23319,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -23327,7 +23341,7 @@ ], "Cell-Line" : "S2-HDR", "submission" : "3318", - "label" : "small-RNA;S2-HDR;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-HDR;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23439,7 +23453,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -23454,7 +23468,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3358", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23462,7 +23476,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -23477,7 +23491,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3359", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -23485,7 +23499,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -23500,7 +23514,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3360", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -23522,6 +23536,40 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "DPL-1", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/SNYDER_ANTIGFP_CHIPCHIP_DPL1/DPL-1_GFP_L4" + ], + "submission" : "3366", + "Strain" : "OP105", + "label" : "DPL-1;OP105;Larvae L4 stage;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Larvae L4 stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "ChIP-seq", + "factor" : "C16A3.4", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_C16A3.4_COMB" + ], + "submission" : "3367", + "Strain" : "OP345", + "label" : "C16A3.4;OP345;Fed L1 stage larvae;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Fed L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-seq", "factor" : "C01B12.2", @@ -23693,6 +23741,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "ALY-2", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/SNYDER_ANTIGFP_CHIPCHIP_ALY2/ALY-2_GFP_L2" + ], + "submission" : "3383", + "Strain" : "OP217", + "label" : "ALY-2;OP217;Larvae L2 stage;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Larvae L2 stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-seq", "factor" : "ALY-2", @@ -23925,6 +23990,18 @@ "Developmental-Stage" : "Embryos 0-12 hr", "organism" : "D. melanogaster" }, + { + "technique" : "ChIP-seq", + "factor" : "GAF", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3397", + "label" : "GAF;Embryos 8-16 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 8-16 hr", + "organism" : "D. melanogaster" + }, { "technique" : "ChIP-seq", "factor" : "trem", @@ -24159,10 +24236,10 @@ "worm/LIEB_WIG_CHIPCHIP_CHROMSIL/SDQ2324_HPL2_N2_LTEMB" ], "submission" : "3438", - "label" : "HPL-2;Late Embryos;20 degree celsius;ChIP-chip", + "label" : "HPL-2;Late Embryonic stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -24175,16 +24252,16 @@ "worm/LIEB_WIG_CHIPCHIP_LIN15B" ], "submission" : "3439", - "label" : "LIN-15B;Late Embryos;20 degree celsius;ChIP-chip", + "label" : "LIN-15B;Late Embryonic stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, { "technique" : "RNA-tiling-array", - "Tissue" : "rectal epithelial cells (L3-L4)", + "Tissue" : "Rectal epithelial cells (L3-L4)", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Waterston, R.", @@ -24193,7 +24270,7 @@ ], "submission" : "3440", "Strain" : "CB6845", - "label" : "total-RNA;CB6845;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;rectal epithelial cells (L3-L4);RNA-tiling-array", + "label" : "total-RNA;CB6845;L3-L4 22 hr 23dC 24 hr post-L1 stage larvae;23 degree celsius;Rectal epithelial cells (L3-L4);RNA-tiling-array", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "L3-L4 22 hr 23dC 24 hr post-L1 stage larvae", @@ -24202,7 +24279,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ORC2", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -24217,7 +24294,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3441", - "label" : "ORC2;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ORC2;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -24248,7 +24325,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "carcass", + "Tissue" : "Carcass", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -24263,7 +24340,7 @@ ], "submission" : "3446", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;carcass;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult eclosion + 20 days", @@ -24271,7 +24348,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -24293,7 +24370,7 @@ ], "Cell-Line" : "Sg4", "submission" : "3506", - "label" : "small-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;Sg4;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -24361,7 +24438,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -24383,7 +24460,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3511", - "label" : "small-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -24391,7 +24468,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -24413,7 +24490,7 @@ ], "Cell-Line" : "ML-DmD9", "submission" : "3512", - "label" : "small-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;ML-DmD9;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -24421,7 +24498,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -24443,7 +24520,7 @@ ], "Cell-Line" : "ML-DmD8", "submission" : "3513", - "label" : "small-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;ML-DmD8;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -24451,7 +24528,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -24473,7 +24550,7 @@ ], "Cell-Line" : "ML-DmD32", "submission" : "3514", - "label" : "small-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;ML-DmD32;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -24681,14 +24758,65 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "HCP-3", + "target" : "Chromatin Structure", + "principal_investigator" : "Lieb, J.", + "Tracks" : [ + "worm/LIEB_WIG_CHIPCHIP_CSP/OD00079_HCP3_N2_EEMB" + ], + "submission" : "3540", + "Strain" : "N2", + "label" : "HCP-3;N2;Early Embryos;20 degree celsius;ChIP-chip", + "category" : "Chromatin structure", + "type" : "data set", + "Developmental-Stage" : "Early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "ChIP-chip", + "factor" : "HCP-3", + "target" : "Chromatin Structure", + "principal_investigator" : "Lieb, J.", + "Tracks" : [ + "worm/LIEB_WIG_CHIPCHIP_CSP/OD00079_HCP3_N2_LTEMB" + ], + "submission" : "3542", + "Strain" : "N2", + "label" : "HCP-3;N2;Late Embryonic stage;20 degree celsius;ChIP-chip", + "category" : "Chromatin structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "ChIP-chip", + "factor" : "HCP-3", + "target" : "Chromatin Structure", + "principal_investigator" : "Lieb, J.", + "Tracks" : [ + "worm/LIEB_WIG_CHIPCHIP_CSP/SDQ0804_HCP3_N2_LTEMB" + ], + "submission" : "3543", + "Strain" : "N2", + "label" : "HCP-3;N2;Late Embryonic stage;20 degree celsius;ChIP-chip", + "category" : "Chromatin structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "ChIP-chip", + "factor" : "RNA polymerase II", "target" : "Histone Modification", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_POL2/ABAB817_8WG16_N2_EEMB" ], "submission" : "3544", - "label" : "pol2;Early Embryos;20 degree celsius;ChIP-chip", + "label" : "RNA polymerase II;Early Embryos;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Early Embryos", @@ -24697,17 +24825,17 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Histone Modification", "principal_investigator" : "Lieb, J.", "Tracks" : [ "worm/LIEB_WIG_CHIPCHIP_POL2/ABAB817_8WG16_N2_LTEMB" ], "submission" : "3545", - "label" : "pol2;Late Embryos;20 degree celsius;ChIP-chip", + "label" : "RNA polymerase II;Late Embryonic stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -24736,10 +24864,10 @@ "worm/LIEB_WIG_CHIPCHIP_H3K4/WA30534819_H3K4ME3_N2_LTEMB_s2" ], "submission" : "3547", - "label" : "H3K4me3;Late Embryos;20 degree celsius;ChIP-chip", + "label" : "H3K4me3;Late Embryonic stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -24848,10 +24976,10 @@ "worm/LIEB_WIG_CHIPCHIP_H3K36/HK00001_H3K36ME3_13C9_N2_LTEMB_s2" ], "submission" : "3554", - "label" : "H3K36me3;Late Embryos;20 degree celsius;ChIP-chip", + "label" : "H3K36me3;Late Embryonic stage;20 degree celsius;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -24960,8 +25088,8 @@ "worm/LIEB_WIG_CHIPSEQ_COREHIS" ], "submission" : "3562", - "Strain" : "Ab:AB1791 H3 :JL:1", - "label" : "H3;Ab:AB1791 H3 :JL:1;Larvae L3 stage;20 degree celsius;ChIP-seq", + "Strain" : "N2", + "label" : "H3;N2;Larvae L3 stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae L3 stage", @@ -24993,8 +25121,7 @@ "worm/LIEB_WIG_CHIPSEQ_TFL3/BH00001_LIN52_N2_L3" ], "submission" : "3565", - "Strain" : "Ab:BH00001 LIN52:JL:1", - "label" : "LIN-52;Ab:BH00001 LIN52:JL:1;Larvae L3 stage;20 degree celsius;ChIP-seq", + "label" : "LIN-52;Larvae L3 stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae L3 stage", @@ -25170,8 +25297,7 @@ "worm/LIEB_WIG_CHIPSEQ_TFMXEMB/SDQ4470_TAG315_N2_MXEMB" ], "submission" : "3579", - "Strain" : "Ab:SDQ4470 TAG315:JL:1", - "label" : "TAG315;Ab:SDQ4470 TAG315:JL:1;Mixed Embryos;20 degree celsius;ChIP-seq", + "label" : "TAG315;Mixed Embryos;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -25187,8 +25313,8 @@ "worm/LIEB_WIG_CHIPSEQ_TFMXEMB/SDQ4526_TF3C_N2_MXEMB" ], "submission" : "3580", - "Strain" : "Ab:SDQ4526 SFC1:JL:1", - "label" : "SFC-1;Ab:SDQ4526 SFC1:JL:1;Mixed Embryos;20 degree celsius;ChIP-seq", + "Strain" : "N2", + "label" : "SFC-1;N2;Mixed Embryos;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -25204,8 +25330,8 @@ "worm/LIEB_WIG_CHIPSEQ_TFMXEMB/SDQ4663_RPC1_N2_MXEMB" ], "submission" : "3581", - "Strain" : "Ab:SDQ4663 RPC1:JL:1", - "label" : "RPC-1;Ab:SDQ4663 RPC1:JL:1;Mixed Embryos;20 degree celsius;ChIP-seq", + "Strain" : "N2", + "label" : "RPC-1;N2;Mixed Embryos;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Mixed Embryos", @@ -25246,6 +25372,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "R02D3.7", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/SNYDER_ANTIGFP_CHIPCHIP_R02D3/R02D3.7_GFP_L3" + ], + "submission" : "3586", + "Strain" : "OP218", + "label" : "R02D3.7;OP218;Larvae L3 stage;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Larvae L3 stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-seq", "factor" : "FOS-1", @@ -25280,6 +25423,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "SAX-3", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_ZK377.2_COMB/ZK377.2_GFP_L1" + ], + "submission" : "3590", + "Strain" : "OP355", + "label" : "SAX-3;OP355;Fed L1 stage larvae;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Fed L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-seq", "factor" : "SAX-3", @@ -25297,6 +25457,57 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "SAX-3", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_ZK377.2_COMB/ZK377.2_GFP_L3" + ], + "submission" : "3592", + "Strain" : "OP355", + "label" : "SAX-3;OP355;Larvae L3 stage;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Larvae L3 stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "ChIP-seq", + "factor" : "SAX-3", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_ZK377.2_COMB/ZK377.2_GFP_L4" + ], + "submission" : "3593", + "Strain" : "OP355", + "label" : "SAX-3;OP355;Larvae L4 stage;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Larvae L4 stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "ChIP-seq", + "factor" : "NHR-77", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_NHR77_COMB/NHR77_GFP_L1" + ], + "submission" : "3594", + "Strain" : "OP353", + "label" : "NHR-77;OP353;Fed L1 stage larvae;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Fed L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-seq", "factor" : "NHR-77", @@ -25365,6 +25576,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "NHR-116", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_NHR116_COMB/NHR116_GFP_L4" + ], + "submission" : "3599", + "Strain" : "OP226", + "label" : "NHR-116;OP226;Larvae L4 stage;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Larvae L4 stage", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-seq", "factor" : "F45C12.2", @@ -25382,6 +25610,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "ChIP-seq", + "factor" : "SPTF-1", + "target" : "Transcriptional Factor", + "principal_investigator" : "Snyder, M.", + "Tracks" : [ + "worm/Snyder_ANTIGFP_WIG_SPTF1_COMB" + ], + "submission" : "3601", + "Strain" : "OP196", + "label" : "SPTF-1;OP196;Fed L1 stage larvae;20 degree celsius;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Fed L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "RNA-seq", "factor" : "total-RNA", @@ -25389,10 +25634,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3608", "Strain" : "Dsim wildtype", - "label" : "total-RNA;Dsim wildtype;Dsim Adult Male Whole Species;RNA-seq", + "label" : "total-RNA;Dsim wildtype;Adult Male Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Male Whole Species", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. simulans" }, { @@ -25402,10 +25647,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3609", "Strain" : "Dsim wildtype", - "label" : "total-RNA;Dsim wildtype;Dsim Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;Dsim wildtype;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. simulans" }, { @@ -25415,10 +25660,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3610", "Strain" : "Dmojavensis", - "label" : "total-RNA;Dmojavensis;Dmoj Adult Male Whole Species;RNA-seq", + "label" : "total-RNA;Dmojavensis;Adult Male Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dmoj Adult Male Whole Species", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. mojavensis" }, { @@ -25428,10 +25673,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3611", "Strain" : "Dmojavensis", - "label" : "total-RNA;Dmojavensis;Dmoj Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;Dmojavensis;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dmoj Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. mojavensis" }, { @@ -25441,10 +25686,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3613", "Strain" : "Dvir wildtype", - "label" : "total-RNA;Dvir wildtype;Dvir Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;Dvir wildtype;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dvir Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. virilis" }, { @@ -25454,10 +25699,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3615", "Strain" : "Dyak wildtype", - "label" : "total-RNA;Dyak wildtype;Dyak Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;Dyak wildtype;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dyak Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. yakuba" }, { @@ -25467,10 +25712,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3617", "Strain" : "Dananassae", - "label" : "total-RNA;Dananassae;Dana Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;Dananassae;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dana Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. ananassae" }, { @@ -25480,10 +25725,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3620", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Male Whole Species;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Male Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Male Whole Species", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. pseudoobscura" }, { @@ -25493,10 +25738,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3621", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. pseudoobscura" }, { @@ -25506,10 +25751,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3622", "Strain" : "D.sim w501", - "label" : "total-RNA;D.sim w501;Dsim Adult Female Whole Species;RNA-seq", + "label" : "total-RNA;D.sim w501;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. simulans" }, { @@ -25519,10 +25764,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "3623", "Strain" : "D.sim w501", - "label" : "total-RNA;D.sim w501;Dsim Adult Male Whole Species;RNA-seq", + "label" : "total-RNA;D.sim w501;Adult Male Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Male Whole Species", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. simulans" }, { @@ -25589,7 +25834,7 @@ }, { "technique" : "DNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Replication-Timing", "target" : "DNA Replication", "principal_investigator" : "MacAlpine, D.", @@ -25617,7 +25862,7 @@ "fly_dmoj/MacAlpine_REPLISEQ/Mid_Repli-Seq" ], "submission" : "3630", - "label" : "Replication-Timing;Late Embryonic stage;embryo-derived cell-line;DNA-seq", + "label" : "Replication-Timing;Late Embryonic stage;Embryo-derived cell-line;DNA-seq", "category" : "Replication", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -25639,10 +25884,10 @@ ], "submission" : "3631", "Strain" : "Dmel y1w67c23", - "label" : "total-RNA;Dmel y1w67c23;Adult Female;RNA-seq", + "label" : "total-RNA;Dmel y1w67c23;Adult Female Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Female", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. melanogaster" }, { @@ -25661,15 +25906,15 @@ ], "submission" : "3632", "Strain" : "Dmel y1w67c23", - "label" : "total-RNA;Dmel y1w67c23;Adult Male;RNA-seq", + "label" : "total-RNA;Dmel y1w67c23;Adult Male Whole Species;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Adult Male", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "RNAi-reagent" : "Untreated-(RNAi-control)", "target" : "mRNA", @@ -25685,7 +25930,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3633", - "label" : "total-RNA;Untreated-(RNAi-control);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Untreated-(RNAi-control);S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -25981,7 +26226,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dMi-2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -25996,7 +26241,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3675", - "label" : "dMi-2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dMi-2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26004,7 +26249,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dMi-2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -26019,7 +26264,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3676", - "label" : "dMi-2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dMi-2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26027,7 +26272,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "H2AV", + "factor" : "H2Av", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -26041,7 +26286,7 @@ ], "submission" : "3678", "Strain" : "Oregon-R", - "label" : "H2AV;Oregon-R;Larvae 3rd instar;ChIP-chip", + "label" : "H2Av;Oregon-R;Larvae 3rd instar;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -26523,7 +26768,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1a", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -26538,7 +26783,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3700", - "label" : "HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1a;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26678,7 +26923,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1a", "RNAi-reagent" : "Fly-GFP-RNAi", "target" : "Non TF Chromatin binding factor", @@ -26694,7 +26939,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3707", - "label" : "HP1a;Fly-GFP-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1a;Fly-GFP-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26702,7 +26947,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "JHDM1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -26717,7 +26962,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3708", - "label" : "JHDM1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "JHDM1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26747,7 +26992,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "POF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -26762,7 +27007,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3710", - "label" : "POF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "POF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26770,7 +27015,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -26784,7 +27029,7 @@ ], "submission" : "3711", "Strain" : "HP1c mutant", - "label" : "pol2;HP1c mutant;Larvae 3rd instar;ChIP-chip", + "label" : "RNA polymerase II;HP1c mutant;Larvae 3rd instar;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -26792,8 +27037,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "pol2", + "Tissue" : "Embryo-derived cell-line", + "factor" : "RNA polymerase II", "RNAi-reagent" : "CG12196-RNAi", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -26808,7 +27053,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3712", - "label" : "pol2;CG12196-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RNA polymerase II;CG12196-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26816,8 +27061,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "pol2", + "Tissue" : "Embryo-derived cell-line", + "factor" : "RNA polymerase II", "RNAi-reagent" : "Fly-GFP-RNAi", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -26832,7 +27077,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3713", - "label" : "pol2;Fly-GFP-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "RNA polymerase II;Fly-GFP-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26960,7 +27205,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(Hw)", "RNAi-reagent" : "Fly-LacZ-RNAi", "target" : "Non TF Chromatin binding factor", @@ -26976,7 +27221,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3719", - "label" : "Su(Hw);Fly-LacZ-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(Hw);Fly-LacZ-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -26993,7 +27238,7 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 EE-2", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { @@ -27007,7 +27252,7 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 L2-1 stage larvae", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { @@ -27021,7 +27266,7 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 YA-1", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { @@ -27043,7 +27288,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryonic/larval hemocyte", + "Tissue" : "Embryonic/larval hemocyte", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -27063,9 +27308,9 @@ "fly_yakuba/Lai_RNASEQ_DUAL_CELLS/mbn2", "fly_dp/Lai_SAM_mbn2" ], - "Cell-Line" : "Mbn2", + "Cell-Line" : "mbn2", "submission" : "3741", - "label" : "small-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq", + "label" : "small-RNA;mbn2;Late Embryonic stage;Embryonic/larval hemocyte;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27073,7 +27318,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -27095,7 +27340,7 @@ ], "Cell-Line" : "1182-4H", "submission" : "3742", - "label" : "small-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "small-RNA;1182-4H;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27103,7 +27348,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "small-RNA", "target" : "small RNA", "principal_investigator" : "Lai, E.", @@ -27125,7 +27370,7 @@ ], "Cell-Line" : "CME-W2", "submission" : "3743", - "label" : "small-RNA;CME-W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "small-RNA;CME-W2;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -27133,7 +27378,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ASH-1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27148,7 +27393,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3744", - "label" : "ASH-1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ASH-1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27156,7 +27401,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "BEAF-32", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27171,7 +27416,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3745", - "label" : "BEAF-32;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "BEAF-32;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27225,7 +27470,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CP190", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27240,7 +27485,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3748", - "label" : "CP190;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CP190;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27248,7 +27493,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CTCF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27263,7 +27508,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3749", - "label" : "CTCF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CTCF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27271,7 +27516,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dRING", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27286,7 +27531,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3750", - "label" : "dRING;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dRING;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27294,7 +27539,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dSFMBT", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27309,7 +27554,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3751", - "label" : "dSFMBT;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dSFMBT;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27317,8 +27562,8 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", - "factor" : "E(Z)", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Enhancer-of-zeste", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -27332,7 +27577,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3752", - "label" : "E(Z);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Enhancer-of-zeste;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27340,7 +27585,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "GAF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27355,7 +27600,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3753", - "label" : "GAF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "GAF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27385,7 +27630,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K23ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27400,7 +27645,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3755", - "label" : "H3K23ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K23ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27432,7 +27677,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27447,7 +27692,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3757", - "label" : "H3K27ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27455,7 +27700,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27470,7 +27715,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3758", - "label" : "H3K27me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27500,7 +27745,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27515,7 +27760,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3760", - "label" : "H3K4me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27523,7 +27768,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K4me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27538,7 +27783,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3761", - "label" : "H3K4me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K4me3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27546,7 +27791,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K79me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27561,7 +27806,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3762", - "label" : "H3K79me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K79me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27569,7 +27814,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K79me2", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27584,7 +27829,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3763", - "label" : "H3K79me2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K79me2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27614,7 +27859,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9ac", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27629,7 +27874,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3765", - "label" : "H3K9ac;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9ac;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27685,7 +27930,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27700,7 +27945,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3768", - "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27708,7 +27953,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27723,7 +27968,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3769", - "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27731,7 +27976,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -27746,7 +27991,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3770", - "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -27888,7 +28133,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1a", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -27903,7 +28148,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3777", - "label" : "HP1a;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1a;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28027,7 +28272,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "JMJD2A/KDM4A", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28042,7 +28287,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3783", - "label" : "JMJD2A/KDM4A;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "JMJD2A/KDM4A;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28050,7 +28295,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "JMJD2A/KDM4A", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28065,7 +28310,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3784", - "label" : "JMJD2A/KDM4A;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "JMJD2A/KDM4A;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28073,7 +28318,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "LSD1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28088,7 +28333,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3785", - "label" : "LSD1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "LSD1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28096,7 +28341,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "LSD1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28111,7 +28356,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3786", - "label" : "LSD1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "LSD1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28119,7 +28364,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MBD-R2", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28134,7 +28379,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3787", - "label" : "MBD-R2;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MBD-R2;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28142,7 +28387,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MLE", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28157,7 +28402,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3788", - "label" : "MLE;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MLE;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28165,7 +28410,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "mod(mdg4)", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28180,7 +28425,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3789", - "label" : "mod(mdg4);S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "mod(mdg4);S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28188,7 +28433,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "NURF301", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28203,7 +28448,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3790", - "label" : "NURF301;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "NURF301;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28211,7 +28456,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Pc", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28226,7 +28471,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3791", - "label" : "Pc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Pc;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28234,7 +28479,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "PCL", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28249,7 +28494,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3792", - "label" : "PCL;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "PCL;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28347,7 +28592,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Psc", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28362,7 +28607,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3797", - "label" : "Psc;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Psc;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28370,7 +28615,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -28384,7 +28629,7 @@ ], "submission" : "3798", "Strain" : "HP1a mutant", - "label" : "pol2;HP1a mutant;Larvae 3rd instar;ChIP-chip", + "label" : "RNA polymerase II;HP1a mutant;Larvae 3rd instar;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -28392,7 +28637,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -28406,7 +28651,7 @@ ], "submission" : "3799", "Strain" : "Oregon-R", - "label" : "pol2;Oregon-R;Larvae 3rd instar;ChIP-chip", + "label" : "RNA polymerase II;Oregon-R;Larvae 3rd instar;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -28414,7 +28659,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Smc3", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28429,7 +28674,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3800", - "label" : "Smc3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Smc3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28461,7 +28706,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ZW5", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28476,7 +28721,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3803", - "label" : "ZW5;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ZW5;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28484,7 +28729,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "ZW5", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28499,15 +28744,139 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3804", - "label" : "ZW5;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "ZW5;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", "organism" : "D. melanogaster" }, + { + "technique" : "ChIP-seq", + "factor" : "broad", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3806", + "label" : "broad;White prepupae (WPP);ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "White prepupae (WPP)", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "H3K27me3", + "target" : "Histone Modification", + "principal_investigator" : "White, K.", + "submission" : "3807", + "Strain" : "D.pseudoobscura wild-type", + "label" : "H3K27me3;D.pseudoobscura wild-type;Embryos 0-4 hr;ChIP-seq", + "category" : "Histone modification and replacement", + "type" : "data set", + "Developmental-Stage" : "Embryos 0-4 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "GAF", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3809", + "Strain" : "D.pseudoobscura wild-type", + "label" : "GAF;D.pseudoobscura wild-type;Embryos 0-4 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 0-4 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "H3K27me3", + "target" : "Histone Modification", + "principal_investigator" : "White, K.", + "submission" : "3810", + "Strain" : "D.pseudoobscura wild-type", + "label" : "H3K27me3;D.pseudoobscura wild-type;Larvae L3 stage;ChIP-seq", + "category" : "Histone modification and replacement", + "type" : "data set", + "Developmental-Stage" : "Larvae L3 stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "Yki", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3823", + "label" : "Yki;Embryos 0-4 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 0-4 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "exd", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3824", + "Strain" : "13T exd-GFP", + "label" : "exd;13T exd-GFP;Embryos 16-24 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 16-24 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "cabut", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3825", + "label" : "cabut;Embryos 16-24 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 16-24 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "Fer3", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3826", + "label" : "Fer3;Embryos 16-24 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 16-24 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "hairy", + "target" : "Transcriptional Factor", + "principal_investigator" : "White, K.", + "submission" : "3827", + "label" : "hairy;Embryos 8-16 hr;ChIP-seq", + "category" : "TF binding sites", + "type" : "data set", + "Developmental-Stage" : "Embryos 8-16 hr", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "factor" : "H3K27me3", + "target" : "Histone Modification", + "principal_investigator" : "White, K.", + "submission" : "3829", + "label" : "H3K27me3;White prepupae (WPP);ChIP-seq", + "category" : "Histone modification and replacement", + "type" : "data set", + "Developmental-Stage" : "White prepupae (WPP)", + "organism" : "D. melanogaster" + }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -28522,7 +28891,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3831", - "label" : "total-RNA;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28844,7 +29213,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1a", "RNAi-reagent" : "CG8409-RNAi", "target" : "Non TF Chromatin binding factor", @@ -28860,7 +29229,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3893", - "label" : "HP1a;CG8409-RNAi;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1a;CG8409-RNAi;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28868,7 +29237,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Pho", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28883,7 +29252,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3894", - "label" : "Pho;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Pho;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28935,7 +29304,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "POF", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28950,7 +29319,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3897", - "label" : "POF;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "POF;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -28980,7 +29349,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Su(var)3-9", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -28995,7 +29364,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3899", - "label" : "Su(var)3-9;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Su(var)3-9;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29204,10 +29573,10 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/BH00005_LIN9_N2_LEMB" ], "submission" : "3924", - "label" : "LIN-9;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "LIN-9;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29220,10 +29589,10 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/JA00011_LIN35_N2_LEMB" ], "submission" : "3925", - "label" : "LIN-35;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "LIN-35;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29236,10 +29605,10 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/BH00003_LIN37_N2_LEMB" ], "submission" : "3928", - "label" : "LIN-37;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "LIN-37;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29252,11 +29621,10 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/BH00001_LIN52_N2_LEMB" ], "submission" : "3930", - "Strain" : "Ab:BH00001 LIN52:JL:1", - "label" : "LIN-52;Ab:BH00001 LIN52:JL:1;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "LIN-52;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29269,10 +29637,10 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/BH00004_LIN54_N2_LEMB" ], "submission" : "3932", - "label" : "LIN-54;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "LIN-54;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29285,10 +29653,10 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/SDQ3590_EFL1_N2_LEMB" ], "submission" : "3934", - "label" : "EFL-1;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "EFL-1;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29301,16 +29669,16 @@ "worm/LIEB_WIG_CHIPSEQ_TFLEMB/SDQ3599_DPL1_N2_LEMB" ], "submission" : "3935", - "label" : "DPL-1;Late Embryos;20 degree celsius;ChIP-seq", + "label" : "DPL-1;Late Embryonic stage;20 degree celsius;ChIP-seq", "category" : "Histone modification and replacement", "type" : "data set", - "Developmental-Stage" : "Late Embryos", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -29325,7 +29693,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3940", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29356,7 +29724,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -29371,7 +29739,7 @@ ], "Cell-Line" : "Kc167", "submission" : "3942", - "label" : "H3K27me1;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27me1;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29379,7 +29747,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K27me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -29394,7 +29762,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3943", - "label" : "H3K27me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K27me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29402,7 +29770,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "dmTopo II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -29417,7 +29785,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3945", - "label" : "dmTopo II;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "dmTopo II;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29425,7 +29793,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP4", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -29440,7 +29808,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3948", - "label" : "HP4;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP4;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29448,7 +29816,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "LSD1", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -29463,7 +29831,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3949", - "label" : "LSD1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "LSD1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29471,7 +29839,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "MRG15", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -29486,7 +29854,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "3950", - "label" : "MRG15;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "MRG15;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -29539,7 +29907,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -29554,7 +29922,7 @@ ], "Cell-Line" : "CME-W1-Cl.8+", "submission" : "3962", - "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -29604,10 +29972,10 @@ ], "submission" : "3977", "Strain" : "N2", - "label" : "total-RNA;N2;Late Embryos 4.5 hrs post-early embryo;20 degree celsius;RNA-seq", + "label" : "total-RNA;N2;Late Embryonic stage 4.5 hrs post-early Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late Embryos 4.5 hrs post-early embryo", + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -29621,10 +29989,10 @@ ], "submission" : "3978", "Strain" : "N2", - "label" : "total-RNA;N2;Late Embryos 4.5 hrs post-early embryo;20 degree celsius;RNA-seq", + "label" : "total-RNA;N2;Late Embryonic stage 4.5 hrs post-early Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late Embryos 4.5 hrs post-early embryo", + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", "organism" : "C. elegans", "temperature" : "20 degree celsius" }, @@ -30053,6 +30421,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/L2_25dC_14hrs_post-L1.all_alignments.ws220.bam.sorted" + ], + "submission" : "4038", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L2 17.75 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Mid-L2 17.75 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "RNA-seq", "factor" : "total-RNA", @@ -30070,6 +30455,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/L3_25dC_25hrs_post-L1.alignments.ws220.bam.sorted" + ], + "submission" : "4041", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L3 26.75 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Mid-L3 26.75 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "RNA-seq", "factor" : "total-RNA", @@ -30087,6 +30489,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/L4_25dC_36hrs_post-L1.alignments.ws220.bam.sorted" + ], + "submission" : "4044", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "RNA-seq", "factor" : "total-RNA", @@ -30112,10 +30531,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4047", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Female Whole Species;Dpse virgin female carcass minus reproductive system;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Female Whole Species;Dpse virgin female carcass minus reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. pseudoobscura" }, { @@ -30126,10 +30545,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4048", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Female Whole Species;Dpse male carcass minus reproductive system;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Female Whole Species;Dpse male carcass minus reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. pseudoobscura" }, { @@ -30140,10 +30559,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4049", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Female Whole Species;Dpse virgin female reproductive system;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Female Whole Species;Dpse virgin female reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. pseudoobscura" }, { @@ -30154,10 +30573,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4050", "Strain" : "D.pseudoobscura wild-type", - "label" : "total-RNA;D.pseudoobscura wild-type;Dpse Adult Female Whole Species;Dpse virgin male reproductive system;RNA-seq", + "label" : "total-RNA;D.pseudoobscura wild-type;Adult Female Whole Species;Dpse virgin male reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dpse Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. pseudoobscura" }, { @@ -30168,10 +30587,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4051", "Strain" : "Dsim wildtype", - "label" : "total-RNA;Dsim wildtype;Dsim Adult Female Whole Species;Dsim virgin female carcass minus reproductive system;RNA-seq", + "label" : "total-RNA;Dsim wildtype;Adult Female Whole Species;Dsim virgin female carcass minus reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. simulans" }, { @@ -30182,10 +30601,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4052", "Strain" : "Dsim wildtype", - "label" : "total-RNA;Dsim wildtype;Dsim Adult Male Whole Species;Dsim male carcass minus reproductive system;RNA-seq", + "label" : "total-RNA;Dsim wildtype;Adult Male Whole Species;Dsim male carcass minus reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Male Whole Species", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. simulans" }, { @@ -30196,10 +30615,10 @@ "principal_investigator" : "Oliver, B.", "submission" : "4053", "Strain" : "Dsim wildtype", - "label" : "total-RNA;Dsim wildtype;Dsim Adult Female Whole Species;Dsim virgin female reproductive system;RNA-seq", + "label" : "total-RNA;Dsim wildtype;Adult Female Whole Species;Dsim virgin female reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Female Whole Species", + "Developmental-Stage" : "Adult Female Whole Species", "organism" : "D. simulans" }, { @@ -30210,12 +30629,75 @@ "principal_investigator" : "Oliver, B.", "submission" : "4054", "Strain" : "Dsim wildtype", - "label" : "total-RNA;Dsim wildtype;Dsim Adult Male Whole Species;Dsim virgin male reproductive system;RNA-seq", + "label" : "total-RNA;Dsim wildtype;Adult Male Whole Species;Dsim virgin male reproductive system;RNA-seq", "category" : "RNA expression profiling", "type" : "data set", - "Developmental-Stage" : "Dsim Adult Male Whole Species", + "Developmental-Stage" : "Adult Male Whole Species", "organism" : "D. simulans" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/4055.merged.sam.gz.bam.sorted", + "worm/submission_4055.sorted" + ], + "submission" : "4055", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "Tissue" : "Myo-3 muscle", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Piano, F.", + "submission" : "4064", + "Strain" : "myo-3-FLAG-PABP-SL2-GFP", + "label" : "small-RNA;myo-3-FLAG-PABP-SL2-GFP;Adult 72 hr post-L1 stage larvae;20 degree celsius;Myo-3 muscle;RNA-seq", + "category" : "RNA expression profiling", + "type" : "data set", + "Developmental-Stage" : "Adult 72 hr post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "Tissue" : "Myo-3 muscle", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Piano, F.", + "submission" : "4065", + "Strain" : "myo-3-FLAG-PABP-SL2-GFP", + "label" : "small-RNA;myo-3-FLAG-PABP-SL2-GFP;L2 20 hr post-L1 stage larvae;20 degree celsius;Myo-3 muscle;RNA-seq", + "category" : "RNA expression profiling", + "type" : "data set", + "Developmental-Stage" : "L2 20 hr post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "Tissue" : "Myo-3 muscle", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Piano, F.", + "submission" : "4066", + "Strain" : "myo-3-FLAG-PABP-SL2-GFP", + "label" : "small-RNA;myo-3-FLAG-PABP-SL2-GFP;L3 30 hr post-L1 stage larvae;20 degree celsius;Myo-3 muscle;RNA-seq", + "category" : "RNA expression profiling", + "type" : "data set", + "Developmental-Stage" : "L3 30 hr post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "ChIP-chip", "factor" : "H3K9me1", @@ -30263,7 +30745,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "HP1b", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -30278,7 +30760,7 @@ ], "Cell-Line" : "Kc167", "submission" : "4127", - "label" : "HP1b;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "HP1b;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -30318,6 +30800,23 @@ "organism" : "C. elegans", "temperature" : "20 degree celsius" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/submission_4132.sorted" + ], + "submission" : "4132", + "Strain" : "N2", + "label" : "total-RNA;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young Adult (pre-gravid) 46 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, { "technique" : "RNA-seq", "factor" : "total-RNA", @@ -30512,7 +31011,7 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 YA-2", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { @@ -30526,7 +31025,7 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 YA-1", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { @@ -30676,7 +31175,7 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 L4-2 stage larvae", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { @@ -30860,12 +31359,12 @@ "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "AF16 EE-2", - "organism" : "C. elegans", + "organism" : "C. briggsae", "temperature" : "20 degree celsius" }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "CG10630", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -30880,7 +31379,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "4176", - "label" : "CG10630;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "CG10630;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -30888,7 +31387,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -30903,7 +31402,7 @@ ], "Cell-Line" : "Kc167", "submission" : "4179", - "label" : "H3;Kc167;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3;Kc167;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -30911,7 +31410,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me1", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -30926,7 +31425,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "4182", - "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me1;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -30934,7 +31433,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "H3K9me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", @@ -30949,7 +31448,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "4183", - "label" : "H3K9me3;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "H3K9me3;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -30980,7 +31479,7 @@ }, { "technique" : "ChIP-chip", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "Rhino", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", @@ -30995,7 +31494,7 @@ ], "Cell-Line" : "S2-DRSC", "submission" : "4187", - "label" : "Rhino;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;ChIP-chip", + "label" : "Rhino;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31086,10 +31585,33 @@ "Developmental-Stage" : "Embryos 4-7 hr", "organism" : "D. melanogaster" }, + { + "read-length" : "36 base pair", + "devstage" : "DevStage:Embryo 4-7h:SC:1", + "technique" : "ChIP-seq", + "factor" : "RNA polymerase II", + "target" : "DNA Replication", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly/MacAlpine_CHIPSEQ_TISSUES", + "fly_simul/MacAlpine_CHIPSEQ_TISSUES", + "fly_virilis/MacAlpine_CHIPSEQ_TISSUES", + "fly_dmoj/MacAlpine_CHIPSEQ_TISSUES", + "fly_ananas/MacAlpine_CHIPSEQ_TISSUES", + "fly_yakuba/MacAlpine_CHIPSEQ_TISSUES", + "fly_dp/MacAlpine_CHIPSEQ_TISSUES" + ], + "submission" : "4193", + "label" : "RNA polymerase II;36 base pair;DevStage:Embryo 4-7h:SC:1;Embryos 4-7 hr;ChIP-seq", + "category" : "Replication", + "type" : "data set", + "Developmental-Stage" : "Embryos 4-7 hr", + "organism" : "D. melanogaster" + }, { "technique" : "ChIP-chip", "Tissue" : "CNS-derived cell-line", - "factor" : "H3 K79 Me3", + "factor" : "H3K79me3", "target" : "Histone Modification", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -31103,7 +31625,7 @@ ], "Cell-Line" : "ML-DmBG3-c2", "submission" : "4197", - "label" : "H3 K79 Me3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", + "label" : "H3K79me3;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;ChIP-chip", "category" : "Histone modification and replacement", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31199,7 +31721,7 @@ }, { "technique" : "ChIP-chip", - "factor" : "pol2", + "factor" : "RNA polymerase II", "target" : "Non TF Chromatin binding factor", "principal_investigator" : "Karpen, G.", "Tracks" : [ @@ -31213,7 +31735,7 @@ ], "submission" : "4204", "Strain" : "POF mutant", - "label" : "pol2;POF mutant;Larvae 3rd instar;ChIP-chip", + "label" : "RNA polymerase II;POF mutant;Larvae 3rd instar;ChIP-chip", "category" : "Other chromatin binding sites", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31222,13 +31744,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4207", - "label" : "total-RNA;cell;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cell;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31237,13 +31759,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4208", - "label" : "total-RNA;cell;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cell;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31252,13 +31774,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4209", - "label" : "total-RNA;cytoplasm;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cytoplasm;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31267,13 +31789,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4210", - "label" : "total-RNA;cytoplasm;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cytoplasm;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31282,13 +31804,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4211", - "label" : "total-RNA;nucleus;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;nucleus;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31297,13 +31819,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4212", - "label" : "total-RNA;nucleus;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;nucleus;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31312,13 +31834,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4213", - "label" : "total-RNA;cell;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cell;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31327,13 +31849,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4214", - "label" : "total-RNA;cell;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cell;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31342,13 +31864,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4215", - "label" : "total-RNA;cytoplasm;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cytoplasm;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31357,13 +31879,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4216", - "label" : "total-RNA;cytoplasm;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cytoplasm;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31372,13 +31894,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4217", - "label" : "total-RNA;nucleus;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;nucleus;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31387,13 +31909,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4218", - "label" : "total-RNA;nucleus;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;nucleus;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31402,13 +31924,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "4219", - "label" : "total-RNA;cell;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cell;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31417,13 +31939,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "4220", - "label" : "total-RNA;cell;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cell;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31432,13 +31954,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "4221", - "label" : "total-RNA;cytoplasm;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cytoplasm;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31447,13 +31969,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "4222", - "label" : "total-RNA;cytoplasm;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;cytoplasm;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31462,13 +31984,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "4223", - "label" : "total-RNA;nucleus;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;nucleus;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31477,13 +31999,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2-DRSC", "submission" : "4224", - "label" : "total-RNA;nucleus;S2-DRSC;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;nucleus;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -31582,13 +32104,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "4231", - "label" : "total-RNA;cell;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;cell;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31597,13 +32119,13 @@ { "cellular-component" : "cell", "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "4232", - "label" : "total-RNA;cell;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;cell;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31612,13 +32134,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "4233", - "label" : "total-RNA;cytoplasm;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;cytoplasm;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31627,13 +32149,13 @@ { "cellular-component" : "cytoplasm", "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "4234", - "label" : "total-RNA;cytoplasm;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;cytoplasm;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31642,13 +32164,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "4235", - "label" : "total-RNA;nucleus;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;nucleus;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31657,13 +32179,13 @@ { "cellular-component" : "nucleus", "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W1-Cl.8+", "submission" : "4236", - "label" : "total-RNA;nucleus;CME-W1-Cl.8+;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;nucleus;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -31733,10 +32255,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4245", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male heads;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Mated male, eclosion + 1 days;Male heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -31747,10 +32269,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4246", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male heads;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Mated male, eclosion + 20 days;Male heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -31761,10 +32283,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4247", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male accessory glands;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Mated male, eclosion + 4 days;Male accessory glands;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -31775,38 +32297,38 @@ "principal_investigator" : "Celniker, S.", "submission" : "4248", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male heads;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Mated male, eclosion + 4 days;Male heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 4 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "testes", + "Tissue" : "Testes", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4249", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Male eclosion + 4 days;testes;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Mated male, eclosion + 4 days;Testes;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 4 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "carcass", + "Tissue" : "Carcass", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4250", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;carcass;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -31817,24 +32339,24 @@ "principal_investigator" : "Celniker, S.", "submission" : "4251", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;Digestive system;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Digestive system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "carcass", + "Tissue" : "Carcass", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4252", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;carcass;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -31845,24 +32367,24 @@ "principal_investigator" : "Celniker, S.", "submission" : "4253", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;Digestive system;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Digestive system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "carcass", + "Tissue" : "Carcass", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4254", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;carcass;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -31873,10 +32395,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4255", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;Digestive system;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Digestive system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -31887,10 +32409,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4256", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Pupae, White prepupae (WPP) + 2 days;Central nervous system;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP) + 2 days;Central nervous system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 2 days", + "Developmental-Stage" : "White prepupae (WPP) + 2 days", "organism" : "D. melanogaster" }, { @@ -31901,24 +32423,24 @@ "principal_investigator" : "Celniker, S.", "submission" : "4257", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Pupae, White prepupae (WPP) + 2 days;Central nervous system;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP) + 2 days;Central nervous system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 2 days", + "Developmental-Stage" : "White prepupae (WPP) + 2 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "carcass", + "Tissue" : "Carcass", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4258", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;carcass;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -31929,24 +32451,24 @@ "principal_investigator" : "Celniker, S.", "submission" : "4259", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult eclosion + 20 days;Digestive system;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult, eclosion + 20 days;Digestive system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", + "Developmental-Stage" : "Adult, eclosion + 20 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "fat body", + "Tissue" : "Fat body", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4260", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;White prepupae (White prepupae (WPP));fat body;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP);Fat body;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { @@ -31965,16 +32487,16 @@ }, { "technique" : "RNA-seq", - "Tissue" : "salivary glands", + "Tissue" : "Salivary glands", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4262", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;White prepupae (White prepupae (WPP));salivary glands;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP);Salivary glands;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { @@ -31985,10 +32507,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4263", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Female eclosion + 4 days;Female virgin heads;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 4 days;Female virgin heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Adult Female, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -31999,10 +32521,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4264", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Female eclosion + 4 days;Female virgin heads;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 4 days;Female virgin heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Adult Female, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -32013,77 +32535,77 @@ "principal_investigator" : "Celniker, S.", "submission" : "4265", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Female eclosion + 4 days;Female virgin heads;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 4 days;Female virgin heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Adult Female, eclosion + 4 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "virgin adult ovaries", + "Tissue" : "Virgin adult ovaries", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4266", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;Adult Female eclosion + 4 days;virgin adult ovaries;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;Adult Female, eclosion + 4 days;Virgin adult ovaries;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Adult Female, eclosion + 4 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "fat body", + "Tissue" : "Fat body", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4267", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;White prepupae (White prepupae (WPP));fat body;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP);Fat body;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "fat body", + "Tissue" : "Fat body", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4268", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;White prepupae (White prepupae (WPP));fat body;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP);Fat body;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "salivary glands", + "Tissue" : "Salivary glands", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4269", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;Oregon R-modENCODE;White prepupae (White prepupae (WPP));salivary glands;RNA-seq", + "label" : "total-RNA;Oregon R-modENCODE;White prepupae (WPP);Salivary glands;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "ethanol", + "Compound" : "Ethanol", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4270", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32092,12 +32614,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "ethanol", + "Compound" : "Ethanol", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4271", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32106,12 +32628,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "ethanol", + "Compound" : "Ethanol", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4272", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Ethanol;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32120,12 +32642,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "caffeine", + "Compound" : "Caffeine", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4273", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;caffeine;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Caffeine;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32134,12 +32656,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "caffeine", + "Compound" : "Caffeine", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4274", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;caffeine;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Caffeine;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32148,12 +32670,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "caffeine", + "Compound" : "Caffeine", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4275", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;caffeine;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Caffeine;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32162,12 +32684,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "cadmium dichloride", + "Compound" : "Cadmium dichloride", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4276", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;cadmium dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Cadmium dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32176,12 +32698,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "cadmium dichloride", + "Compound" : "Cadmium dichloride", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4277", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;cadmium dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Cadmium dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32190,12 +32712,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "cadmium dichloride", + "Compound" : "Cadmium dichloride", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4278", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;cadmium dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Cadmium dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32204,12 +32726,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "cadmium dichloride", + "Compound" : "Cadmium dichloride", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4279", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;cadmium dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Cadmium dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32246,12 +32768,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "copper(2+) sulfate", + "Compound" : "Copper(2+) sulfate", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4282", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;copper(2+) sulfate;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Copper(2+) sulfate;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32260,12 +32782,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "copper(2+) sulfate", + "Compound" : "Copper(2+) sulfate", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4283", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;copper(2+) sulfate;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Copper(2+) sulfate;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32288,12 +32810,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "paraquat", + "Compound" : "Paraquat", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4285", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;paraquat;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Paraquat;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32302,12 +32824,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "paraquat", + "Compound" : "Paraquat", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4286", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;paraquat;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Paraquat;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32316,12 +32838,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "rotenone", + "Compound" : "Rotenone", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4287", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;rotenone;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Rotenone;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32330,12 +32852,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "rotenone", + "Compound" : "Rotenone", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4288", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;rotenone;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Rotenone;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32344,12 +32866,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "zinc dichloride", + "Compound" : "Zinc dichloride", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4289", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;zinc dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", + "label" : "total-RNA;Zinc dichloride;Oregon R-modENCODE;Adult mixed-sex flies, eclosion + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult mixed-sex flies, eclosion + 4 days", @@ -32358,12 +32880,12 @@ { "technique" : "RNA-seq", "factor" : "total-RNA", - "Compound" : "zinc dichloride", + "Compound" : "Zinc dichloride", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "submission" : "4290", "Strain" : "Oregon R-modENCODE", - "label" : "total-RNA;zinc dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", + "label" : "total-RNA;Zinc dichloride;Oregon R-modENCODE;L3 stage wandering stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "L3 stage wandering stage larvae", @@ -32386,10 +32908,10 @@ ], "submission" : "4291", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult mated female eclosion + 1 days;Mated Female heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Adult mated female,, eclosion + 1 days;Mated Female heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult mated female eclosion + 1 days", + "Developmental-Stage" : "Adult mated female,, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -32409,10 +32931,10 @@ ], "submission" : "4292", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult mated female eclosion + 20 days;Mated Female heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated female, eclosion + 20 days;Mated Female heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult mated female eclosion + 20 days", + "Developmental-Stage" : "Mated female, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -32432,10 +32954,10 @@ ], "submission" : "4293", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult mated female eclosion + 4 days;Mated Female heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated female, eclosion + 4 days;Mated Female heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult mated female eclosion + 4 days", + "Developmental-Stage" : "Mated female, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -32455,10 +32977,10 @@ ], "submission" : "4294", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult mated female eclosion + 4 days;Mated Adult Ovaries;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Adult mated female, eclosion + 4 days;Mated Adult Ovaries;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult mated female eclosion + 4 days", + "Developmental-Stage" : "Adult mated female, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -32478,10 +33000,10 @@ ], "submission" : "4295", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 1 days;Male heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated male, eclosion + 1 days;Male heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 1 days", + "Developmental-Stage" : "Mated male, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -32501,10 +33023,10 @@ ], "submission" : "4296", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 20 days;Male heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated male, eclosion + 20 days;Male heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 20 days", + "Developmental-Stage" : "Mated male, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -32524,10 +33046,10 @@ ], "submission" : "4297", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male accessory glands;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated male, eclosion + 4 days;Male accessory glands;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -32547,10 +33069,10 @@ ], "submission" : "4298", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated male, eclosion + 4 days;Male heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -32570,15 +33092,15 @@ ], "submission" : "4299", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male testes;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Mated male, eclosion + 4 days;Male testes;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", + "Developmental-Stage" : "Mated male, eclosion + 4 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", + "Tissue" : "Adult Carcass", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -32593,7 +33115,7 @@ ], "submission" : "4300", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 1 days;Adult carcass;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 1 days;Adult Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult eclosion + 1 days", @@ -32624,7 +33146,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", + "Tissue" : "Adult Carcass", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -32639,7 +33161,7 @@ ], "submission" : "4302", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 20 days;Adult carcass;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 20 days;Adult Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult eclosion + 20 days", @@ -32670,7 +33192,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", + "Tissue" : "Adult Carcass", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -32685,7 +33207,7 @@ ], "submission" : "4304", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 4 days;Adult carcass;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 4 days;Adult Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Adult eclosion + 4 days", @@ -32731,10 +33253,10 @@ ], "submission" : "4306", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Pupae, White prepupae (WPP) + 2 days;Adult central nervous system;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP) + 2 days;Adult central nervous system;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 2 days", + "Developmental-Stage" : "White prepupae (WPP) + 2 days", "organism" : "D. melanogaster" }, { @@ -32762,7 +33284,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", + "Tissue" : "Adult Carcass", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -32777,7 +33299,7 @@ ], "submission" : "4308", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;Adult carcass;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;Adult Carcass;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late third instar larvae", @@ -32892,10 +33414,10 @@ ], "submission" : "4313", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 1 days;Female virgin heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Virgin female, eclosion + 1 days;Female virgin heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Virgin female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -32915,10 +33437,10 @@ ], "submission" : "4314", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 20 days;Female virgin heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Virgin female, eclosion + 20 days;Female virgin heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 20 days", + "Developmental-Stage" : "Virgin female, eclosion + 20 days", "organism" : "D. melanogaster" }, { @@ -32938,10 +33460,10 @@ ], "submission" : "4315", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 4 days;Female virgin heads;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Virgin female, eclosion + 4 days;Female virgin heads;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Virgin female, eclosion + 4 days", "organism" : "D. melanogaster" }, { @@ -32961,15 +33483,15 @@ ], "submission" : "4316", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 4 days;Female virgin adult ovaries;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Virgin female, eclosion + 4 days;Female virgin adult ovaries;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", + "Developmental-Stage" : "Virgin female, eclosion + 4 days", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "Tissue" : "pupae fat body", + "Tissue" : "Pupae fat body", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -32984,7 +33506,7 @@ ], "submission" : "4317", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Pupae;pupae fat body;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;Pupae;Pupae fat body;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Pupae", @@ -32992,7 +33514,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "fat body", + "Tissue" : "Fat body", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -33007,7 +33529,7 @@ ], "submission" : "4318", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP);fat body;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP);Fat body;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "White prepupae (WPP)", @@ -33015,7 +33537,7 @@ }, { "technique" : "RNA-seq", - "Tissue" : "salivary glands", + "Tissue" : "Salivary glands", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", @@ -33030,12 +33552,59 @@ ], "submission" : "4319", "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP);salivary glands;RNA-seq", + "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP);Salivary glands;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, + { + "read-length" : "36 base pair", + "technique" : "ChIP-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "ORC2", + "target" : "DNA Replication", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_dp/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq", + "fly_ananas/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq", + "fly_virilis/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq", + "fly/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq", + "fly_simul/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq", + "fly_yakuba/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq", + "fly_dmoj/MacAlpine_ORC_CHIPSEQ_COMB/ORC2Cl8ChIP-Seq" + ], + "Cell-Line" : "CME-W1-Cl.8+", + "submission" : "4351", + "label" : "ORC2;36 base pair;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-seq", + "category" : "Replication", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "ChIP-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "RNA polymerase II", + "target" : "DNA Replication", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_simul/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq", + "fly_virilis/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq", + "fly_dmoj/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq", + "fly/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq", + "fly_yakuba/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq", + "fly_dp/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq", + "fly_ananas/MacAlpine_ORC_CHIPSEQ_COMB/PolIICl8ChIP-Seq" + ], + "Cell-Line" : "CME-W1-Cl.8+", + "submission" : "4352", + "label" : "RNA polymerase II;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;ChIP-seq", + "category" : "Replication", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, { "technique" : "RNA-seq", "factor" : "transfrag", @@ -33479,13 +34048,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "1182-4H", "submission" : "4391", - "label" : "total-RNA;1182-4H;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;1182-4H;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33493,13 +34062,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "ventral prothoracic disc", + "Tissue" : "Ventral prothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-L1", "submission" : "4392", - "label" : "total-RNA;CME-L1;Larvae 3rd instar;ventral prothoracic disc;RNA-seq", + "label" : "total-RNA;CME-L1;Larvae 3rd instar;Ventral prothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33507,13 +34076,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "CME-W2", "submission" : "4393", - "label" : "total-RNA;CME-W2;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;CME-W2;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33521,13 +34090,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "GM2", "submission" : "4394", - "label" : "total-RNA;GM2;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;GM2;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33535,13 +34104,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Kc167", "submission" : "4395", - "label" : "total-RNA;Kc167;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33549,13 +34118,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryonic/larval hemocyte", + "Tissue" : "Embryonic/larval hemocyte", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Cell-Line" : "Mbn2", + "Cell-Line" : "mbn2", "submission" : "4396", - "label" : "total-RNA;Mbn2;Late Embryonic stage;embryonic/larval hemocyte;RNA-seq", + "label" : "total-RNA;mbn2;Late Embryonic stage;Embryonic/larval hemocyte;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33563,13 +34132,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD17-c3", "submission" : "4397", - "label" : "total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD17-c3;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33591,13 +34160,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "eye-antenna disc-derived cell-line", + "Tissue" : "Eye-antenna disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD11", "submission" : "4399", - "label" : "total-RNA;ML-DmD11;Larvae 3rd instar;eye-antenna disc-derived cell-line;RNA-seq", + "label" : "total-RNA;ML-DmD11;Larvae 3rd instar;Eye-antenna disc-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33605,13 +34174,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD16-c3", "submission" : "4400", - "label" : "total-RNA;ML-DmD16-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33619,13 +34188,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD17-c3", "submission" : "4401", - "label" : "total-RNA;ML-DmD17-c3;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD17-c3;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33633,13 +34202,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "antenna disc-derived cell-line", + "Tissue" : "Antenna disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD20-c5", "submission" : "4402", - "label" : "total-RNA;ML-DmD20-c5;Larvae 3rd instar;antenna disc-derived cell-line;RNA-seq", + "label" : "total-RNA;ML-DmD20-c5;Larvae 3rd instar;Antenna disc-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33647,13 +34216,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD21", "submission" : "4403", - "label" : "total-RNA;ML-DmD21;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD21;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33661,13 +34230,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD32", "submission" : "4404", - "label" : "total-RNA;ML-DmD32;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD32;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33675,13 +34244,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "imaginal disc-derived cell-line", + "Tissue" : "Imaginal disc-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD4-c1", "submission" : "4405", - "label" : "total-RNA;ML-DmD4-c1;Larvae 3rd instar;imaginal disc-derived cell-line;RNA-seq", + "label" : "total-RNA;ML-DmD4-c1;Larvae 3rd instar;Imaginal disc-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33689,13 +34258,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD8", "submission" : "4406", - "label" : "total-RNA;ML-DmD8;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD8;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33703,13 +34272,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "dorsal mesothoracic disc", + "Tissue" : "Dorsal mesothoracic disc", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "ML-DmD9", "submission" : "4407", - "label" : "total-RNA;ML-DmD9;Larvae 3rd instar;dorsal mesothoracic disc;RNA-seq", + "label" : "total-RNA;ML-DmD9;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Larvae 3rd instar", @@ -33717,13 +34286,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S1", "submission" : "4408", - "label" : "total-RNA;S1;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S1;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33731,13 +34300,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S2R+", "submission" : "4409", - "label" : "total-RNA;S2R+;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S2R+;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33745,13 +34314,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "S3", "submission" : "4410", - "label" : "total-RNA;S3;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;S3;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33759,13 +34328,13 @@ }, { "technique" : "RNA-seq", - "Tissue" : "embryo-derived cell-line", + "Tissue" : "Embryo-derived cell-line", "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Cell-Line" : "Sg4", "submission" : "4411", - "label" : "total-RNA;Sg4;Late Embryonic stage;embryo-derived cell-line;RNA-seq", + "label" : "total-RNA;Sg4;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", "Developmental-Stage" : "Late Embryonic stage", @@ -33855,6 +34424,48 @@ "type" : "data set", "organism" : "D. melanogaster" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_ananas/Kc167.sub_4416.bam", + "fly_yakuba/Kc167.sub_4416.bam", + "fly_dp/Kc167.sub_4416.bam", + "fly_virilis/Kc167.sub_4416.bam", + "fly_simul/Kc167.sub_4416.bam", + "fly/Kc167.sub_4416.bam", + "fly_dmoj/Kc167.sub_4416.bam" + ], + "Cell-Line" : "Kc167", + "submission" : "4416", + "label" : "total-RNA;Kc167;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "organism" : "D. melanogaster" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dmoj/MBN2.sub_4417.bam", + "fly_virilis/MBN2.sub_4417.bam", + "fly/MBN2.sub_4417.bam", + "fly_dp/MBN2.sub_4417.bam", + "fly_yakuba/MBN2.sub_4417.bam", + "fly_simul/MBN2.sub_4417.bam", + "fly_ananas/MBN2.sub_4417.bam" + ], + "Cell-Line" : "mbn2", + "submission" : "4417", + "label" : "total-RNA;mbn2;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "organism" : "D. melanogaster" + }, { "technique" : "RNA-seq", "factor" : "transfrag", @@ -34128,6 +34739,27 @@ "type" : "data set", "organism" : "D. melanogaster" }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_virilis/S3.sub_4431.bam", + "fly_dmoj/S3.sub_4431.bam", + "fly_ananas/S3.sub_4431.bam", + "fly_dp/S3.sub_4431.bam", + "fly_simul/S3.sub_4431.bam", + "fly_yakuba/S3.sub_4431.bam", + "fly/S3.sub_4431.bam" + ], + "Cell-Line" : "S3", + "submission" : "4431", + "label" : "total-RNA;S3;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "organism" : "D. melanogaster" + }, { "technique" : "RNA-seq", "factor" : "transfrag", @@ -34156,10 +34788,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4433", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Female eclosion + 1 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;Adult Female, eclosion + 1 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", + "Developmental-Stage" : "Adult Female, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -34169,10 +34801,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4434", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Female eclosion + 30 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;Adult Female, eclosion + 30 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 30 days", + "Developmental-Stage" : "Adult Female, eclosion + 30 days", "organism" : "D. melanogaster" }, { @@ -34182,10 +34814,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4435", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Female eclosion + 5 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;Adult Female, eclosion + 5 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 5 days", + "Developmental-Stage" : "Adult Female, eclosion + 5 days", "organism" : "D. melanogaster" }, { @@ -34195,10 +34827,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4436", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Male eclosion + 1 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;Adult Male, eclosion + 1 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 1 days", + "Developmental-Stage" : "Adult Male, eclosion + 1 days", "organism" : "D. melanogaster" }, { @@ -34208,10 +34840,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4437", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Male eclosion + 30 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;Adult Male, eclosion + 30 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 30 days", + "Developmental-Stage" : "Adult Male, eclosion + 30 days", "organism" : "D. melanogaster" }, { @@ -34221,10 +34853,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4438", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Adult Male eclosion + 5 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;Adult Male, eclosion + 5 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 5 days", + "Developmental-Stage" : "Adult Male, eclosion + 5 days", "organism" : "D. melanogaster" }, { @@ -34416,10 +35048,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4453", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , 12 hr post-molt stage larvae;RNA-seq", + "label" : "total-RNA;Y cn bw sp;L3 stage 12 hr post-molt stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "L3 stage , 12 hr post-molt stage larvae", + "Developmental-Stage" : "L3 stage 12 hr post-molt stage larvae", "organism" : "D. melanogaster" }, { @@ -34429,10 +35061,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4454", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , dark blue gut PS(1-2) stage larvae;RNA-seq", + "label" : "total-RNA;Y cn bw sp;L3 stage dark blue gut PS(1-2) stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "L3 stage , dark blue gut PS(1-2) stage larvae", + "Developmental-Stage" : "L3 stage dark blue gut PS(1-2) stage larvae", "organism" : "D. melanogaster" }, { @@ -34442,10 +35074,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4455", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , light blue gut PS(3-6) stage larvae;RNA-seq", + "label" : "total-RNA;Y cn bw sp;L3 stage light blue gut PS(3-6) stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "L3 stage , light blue gut PS(3-6) stage larvae", + "Developmental-Stage" : "L3 stage light blue gut PS(3-6) stage larvae", "organism" : "D. melanogaster" }, { @@ -34455,10 +35087,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4456", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;L3 stage , clear gut PS(7-9) stage larvae;RNA-seq", + "label" : "total-RNA;Y cn bw sp;L3 stage clear gut PS(7-9) stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "L3 stage , clear gut PS(7-9) stage larvae", + "Developmental-Stage" : "L3 stage clear gut PS(7-9) stage larvae", "organism" : "D. melanogaster" }, { @@ -34494,10 +35126,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4459", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 2 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP) + 2 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 2 days", + "Developmental-Stage" : "White prepupae (WPP) + 2 days", "organism" : "D. melanogaster" }, { @@ -34507,10 +35139,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4460", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 3 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP) + 3 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 3 days", + "Developmental-Stage" : "White prepupae (WPP) + 3 days", "organism" : "D. melanogaster" }, { @@ -34520,10 +35152,10 @@ "principal_investigator" : "Celniker, S.", "submission" : "4461", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Pupae, White prepupae (WPP) + 4 days;RNA-seq", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP) + 4 days;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae, White prepupae (WPP) + 4 days", + "Developmental-Stage" : "White prepupae (WPP) + 4 days", "organism" : "D. melanogaster" }, { @@ -34533,1493 +35165,1378 @@ "principal_investigator" : "Celniker, S.", "submission" : "4462", "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;White prepupae (White prepupae (WPP));RNA-seq", + "label" : "total-RNA;Y cn bw sp;White prepupae (WPP);RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (White prepupae (WPP))", + "Developmental-Stage" : "White prepupae (WPP)", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4595", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 0-2 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4493", + "worm/SLSITES_4493", + "worm/POLYA_4493" + ], + "submission" : "4493", + "Strain" : "N2", + "label" : "total-RNA;N2;Early Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 0-2 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4596", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 10-12 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/POLYA_4494", + "worm/SLSITES_4494", + "worm/INTRONS_4494" + ], + "submission" : "4494", + "Strain" : "spe-9(hc88)", + "label" : "total-RNA;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;23 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 10-12 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Adult spe-9(hc88) 8 days post-L4 molt stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4597", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 12-14 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4500", + "worm/POLYA_4500", + "worm/SLSITES_4500" + ], + "submission" : "4500", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 12-14 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4598", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 14-16 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4501", + "worm/POLYA_4501", + "worm/SLSITES_4501" + ], + "submission" : "4501", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 14-16 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4599", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 16-18 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4502", + "worm/SLSITES_4502", + "worm/POLYA_4502" + ], + "submission" : "4502", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 16-18 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4600", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 18-20 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/SLSITES_4503", + "worm/POLYA_4503", + "worm/INTRONS_4503" + ], + "submission" : "4503", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 18-20 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4601", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 20-22 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4504", + "worm/SLSITES_4504", + "worm/POLYA_4504" + ], + "submission" : "4504", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 20-22 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4602", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 22-24 hrSC;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/POLYA_4505", + "worm/INTRONS_4505", + "worm/SLSITES_4505" + ], + "submission" : "4505", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 22-24 hrSC", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4603", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 2-4 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4506", + "worm/SLSITES_4506", + "worm/POLYA_4506" + ], + "submission" : "4506", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 2-4 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4604", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 4-6 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/SLSITES_4507", + "worm/POLYA_4507", + "worm/INTRONS_4507" + ], + "submission" : "4507", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 4-6 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4605", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 6-8 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/SLSITES_4508", + "worm/INTRONS_4508", + "worm/POLYA_4508" + ], + "submission" : "4508", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 6-8 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", - "submission" : "4606", - "Strain" : "Y cn bw sp", - "label" : "total-RNA;Y cn bw sp;Embryos 8-10 hr;RNA-seq", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/POLYA_4510", + "worm/INTRONS_4510", + "worm/SLSITES_4510" + ], + "submission" : "4510", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 8-10 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dmoj/SOLiD_em0-2hr.bam.bam.sorted", - "fly_dp/SOLiD_em0-2hr.bam.bam.sorted", - "fly_virilis/SOLiD_em0-2hr.bam.bam.sorted", - "fly_simul/SOLiD_em0-2hr.bam.bam.sorted", - "fly/SOLiD_em0-2hr.bam.bam.sorted", - "fly_yakuba/SOLiD_em0-2hr.bam.bam.sorted", - "fly_ananas/SOLiD_em0-2hr.bam.bam.sorted" + "worm/SLSITES_4511", + "worm/POLYA_4511", + "worm/INTRONS_4511" ], - "submission" : "4607", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 0-2 hr;integrated-gene-model", + "submission" : "4511", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 0-2 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/SOLiD_em10-12hr.bam.bam.sorted", - "fly/SOLiD_em10-12hr.bam.bam.sorted", - "fly_simul/SOLiD_em10-12hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em10-12hr.bam.bam.sorted", - "fly_ananas/SOLiD_em10-12hr.bam.bam.sorted", - "fly_yakuba/SOLiD_em10-12hr.bam.bam.sorted", - "fly_virilis/SOLiD_em10-12hr.bam.bam.sorted" + "worm/SLSITES_4512", + "worm/POLYA_4512", + "worm/INTRONS_4512" ], - "submission" : "4608", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 0-12 hr;integrated-gene-model", + "submission" : "4512", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 0-12 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em12-14hr.bam.bam.sorted", - "fly_ananas/SOLiD_em12-14hr.bam.bam.sorted", - "fly_dp/SOLiD_em12-14hr.bam.bam.sorted", - "fly_virilis/SOLiD_em12-14hr.bam.bam.sorted", - "fly_simul/SOLiD_em12-14hr.bam.bam.sorted", - "fly/SOLiD_em12-14hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em12-14hr.bam.bam.sorted" + "worm/INTRONS_4513", + "worm/SLSITES_4513", + "worm/POLYA_4513" ], - "submission" : "4609", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 12-14 hr;integrated-gene-model", + "submission" : "4513", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 12-14 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em14-16hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em14-16hr.bam.bam.sorted", - "fly/SOLiD_em14-16hr.bam.bam.sorted", - "fly_dp/SOLiD_em14-16hr.bam.bam.sorted", - "fly_virilis/SOLiD_em14-16hr.bam.bam.sorted", - "fly_ananas/SOLiD_em14-16hr.bam.bam.sorted", - "fly_simul/SOLiD_em14-16hr.bam.bam.sorted" + "worm/SLSITES_4515", + "worm/POLYA_4515", + "worm/INTRONS_4515" ], - "submission" : "4610", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 14-16 hr;integrated-gene-model", + "submission" : "4515", + "Strain" : "fer-15(b26)", + "label" : "total-RNA;fer-15(b26);Young Adult;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 14-16 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Young Adult", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em16-18hr.bam.bam.sorted", - "fly_simul/SOLiD_em16-18hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em16-18hr.bam.bam.sorted", - "fly_ananas/SOLiD_em16-18hr.bam.bam.sorted", - "fly_virilis/SOLiD_em16-18hr.bam.bam.sorted", - "fly/SOLiD_em16-18hr.bam.bam.sorted", - "fly_dp/SOLiD_em16-18hr.bam.bam.sorted" + "worm/POLYA_4516", + "worm/SLSITES_4516", + "worm/INTRONS_4516" ], - "submission" : "4611", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 16-18 hr;integrated-gene-model", + "submission" : "4516", + "Strain" : "fer-15(b26)", + "label" : "total-RNA;fer-15(b26);Young Adult;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 16-18 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Young Adult", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em18-20hr.bam.bam.sorted", - "fly_simul/SOLiD_em18-20hr.bam.bam.sorted", - "fly_dp/SOLiD_em18-20hr.bam.bam.sorted", - "fly_virilis/SOLiD_em18-20hr.bam.bam.sorted", - "fly_ananas/SOLiD_em18-20hr.bam.bam.sorted", - "fly/SOLiD_em18-20hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em18-20hr.bam.bam.sorted" + "worm/INTRONS_4517", + "worm/SLSITES_4517", + "worm/POLYA_4517" ], - "submission" : "4612", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 18-20 hr;integrated-gene-model", + "submission" : "4517", + "Strain" : "N2", + "label" : "total-RNA;N2;4 cell Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 18-20 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "4 cell Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/SOLiD_em20-22hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em20-22hr.bam.bam.sorted", - "fly_yakuba/SOLiD_em20-22hr.bam.bam.sorted", - "fly_simul/SOLiD_em20-22hr.bam.bam.sorted", - "fly_dp/SOLiD_em20-22hr.bam.bam.sorted", - "fly_ananas/SOLiD_em20-22hr.bam.bam.sorted", - "fly/SOLiD_em20-22hr.bam.bam.sorted" + "worm/POLYA_4519", + "worm/INTRONS_4519", + "worm/SLSITES_4519" ], - "submission" : "4613", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 20-22 hr;integrated-gene-model", + "submission" : "4519", + "Strain" : "N2", + "label" : "total-RNA;N2;Young Adult;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 20-22 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Young Adult", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em22-24hr.bam.bam.sorted", - "fly_simul/SOLiD_em22-24hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em22-24hr.bam.bam.sorted", - "fly/SOLiD_em22-24hr.bam.bam.sorted", - "fly_dp/SOLiD_em22-24hr.bam.bam.sorted", - "fly_ananas/SOLiD_em22-24hr.bam.bam.sorted", - "fly_virilis/SOLiD_em22-24hr.bam.bam.sorted" + "worm/POLYA_4520", + "worm/INTRONS_4520", + "worm/SLSITES_4520" ], - "submission" : "4614", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 22-24 hr;integrated-gene-model", + "submission" : "4520", + "Strain" : "dpy28(y1) him-8(e1489)", + "label" : "total-RNA;dpy28(y1) him-8(e1489);Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 22-24 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/SOLiD_em2-4hr.bam.bam.sorted", - "fly_yakuba/SOLiD_em2-4hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em2-4hr.bam.bam.sorted", - "fly_ananas/SOLiD_em2-4hr.bam.bam.sorted", - "fly_simul/SOLiD_em2-4hr.bam.bam.sorted", - "fly_virilis/SOLiD_em2-4hr.bam.bam.sorted", - "fly/SOLiD_em2-4hr.bam.bam.sorted" + "worm/POLYA_4521", + "worm/INTRONS_4521", + "worm/SLSITES_4521" ], - "submission" : "4615", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 2-4 hr;integrated-gene-model", + "submission" : "4521", + "Strain" : "dpy28(y1) him-8(e1489)", + "label" : "total-RNA;dpy28(y1) him-8(e1489);Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 2-4 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em4-6hr.bam.bam.sorted", - "fly_ananas/SOLiD_em4-6hr.bam.bam.sorted", - "fly/SOLiD_em4-6hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em4-6hr.bam.bam.sorted", - "fly_simul/SOLiD_em4-6hr.bam.bam.sorted", - "fly_dp/SOLiD_em4-6hr.bam.bam.sorted", - "fly_virilis/SOLiD_em4-6hr.bam.bam.sorted" + "worm/INTRONS_4522", + "worm/POLYA_4522", + "worm/SLSITES_4522" ], - "submission" : "4616", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 4-6 hr;integrated-gene-model", + "submission" : "4522", + "Strain" : "him-8(e1489)", + "label" : "total-RNA;him-8(e1489);Embryos him-8(e1480) EmMalesHIM8-2 hr;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 4-6 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Embryos him-8(e1480) EmMalesHIM8-2 hr", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em6-8hr.bam.bam.sorted", - "fly/SOLiD_em6-8hr.bam.bam.sorted", - "fly_simul/SOLiD_em6-8hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em6-8hr.bam.bam.sorted", - "fly_ananas/SOLiD_em6-8hr.bam.bam.sorted", - "fly_virilis/SOLiD_em6-8hr.bam.bam.sorted", - "fly_dp/SOLiD_em6-8hr.bam.bam.sorted" + "worm/INTRONS_4523", + "worm/POLYA_4523", + "worm/SLSITES_4523" ], - "submission" : "4617", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 6-8 hr;integrated-gene-model", + "submission" : "4523", + "Strain" : "fer-15(b26)", + "label" : "total-RNA;fer-15(b26);Young Adult;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 6-8 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Young Adult", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { - "technique" : "integrated-gene-model", - "factor" : "transfrag", + "technique" : "RNA-seq", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/SOLiD_em8-10hr.bam.bam.sorted", - "fly_ananas/SOLiD_em8-10hr.bam.bam.sorted", - "fly_simul/SOLiD_em8-10hr.bam.bam.sorted", - "fly_dmoj/SOLiD_em8-10hr.bam.bam.sorted", - "fly_dp/SOLiD_em8-10hr.bam.bam.sorted", - "fly/SOLiD_em8-10hr.bam.bam.sorted", - "fly_virilis/SOLiD_em8-10hr.bam.bam.sorted" + "worm/SLSITES_4524", + "worm/INTRONS_4524", + "worm/POLYA_4524" ], - "submission" : "4618", - "Strain" : "Y cn bw sp", - "label" : "transfrag;Y cn bw sp;Embryos 8-10 hr;integrated-gene-model", + "submission" : "4524", + "Strain" : "fer-15(b26)", + "label" : "total-RNA;fer-15(b26);Young Adult;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Embryos 8-10 hr", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Young Adult", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Mated Female heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_ananas/submission_4642.sorted", - "fly_yakuba/submission_4642.sorted", - "fly/submission_4642.sorted", - "fly_simul/submission_4642.sorted", - "fly_dp/submission_4642.sorted", - "fly_dmoj/submission_4642.sorted", - "fly_virilis/submission_4642.sorted" + "worm/SLSITES_4525", + "worm/INTRONS_4525", + "worm/POLYA_4525" ], - "submission" : "4642", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 1 days;Mated Female heads;RNA-seq", + "submission" : "4525", + "Strain" : "fer-15(b26)", + "label" : "total-RNA;fer-15(b26);Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Mated Female heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/submission_4643.sorted", - "fly_yakuba/submission_4643.sorted", - "fly/submission_4643.sorted", - "fly_virilis/submission_4643.sorted", - "fly_dp/submission_4643.sorted", - "fly_ananas/submission_4643.sorted", - "fly_dmoj/submission_4643.sorted" + "worm/INTRONS_4526", + "worm/SLSITES_4526", + "worm/POLYA_4526" ], - "submission" : "4643", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 20 days;Mated Female heads;RNA-seq", + "submission" : "4526", + "Strain" : "fer-15(b26)", + "label" : "total-RNA;fer-15(b26);Mid-L4 34.25 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 20 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Mated Female heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_ananas/submission_4644.sorted", - "fly_dp/submission_4644.sorted", - "fly_yakuba/submission_4644.sorted", - "fly_simul/submission_4644.sorted", - "fly_dmoj/submission_4644.sorted", - "fly_virilis/submission_4644.sorted", - "fly/submission_4644.sorted" + "worm/INTRONS_4527", + "worm/POLYA_4527", + "worm/SLSITES_4527" ], - "submission" : "4644", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 4 days;Mated Female heads;RNA-seq", + "submission" : "4527", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L1 4 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L1 4 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Mated Adult Ovaries", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4645.sorted", - "fly_dmoj/submission_4645.sorted", - "fly_dp/submission_4645.sorted", - "fly_virilis/submission_4645.sorted", - "fly_ananas/submission_4645.sorted", - "fly_simul/submission_4645.sorted", - "fly/submission_4645.sorted" + "worm/SLSITES_4528", + "worm/INTRONS_4528" ], - "submission" : "4645", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 4 days;Mated Adult Ovaries;RNA-seq", + "submission" : "4528", + "Strain" : "N2", + "label" : "total-RNA;N2;Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult male heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/submission_4646.sorted", - "fly_yakuba/submission_4646.sorted", - "fly_simul/submission_4646.sorted", - "fly_ananas/submission_4646.sorted", - "fly/submission_4646.sorted", - "fly_dp/submission_4646.sorted", - "fly_dmoj/submission_4646.sorted" + "worm/INTRONS_4529", + "worm/POLYA_4529", + "worm/SLSITES_4529" ], - "submission" : "4646", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 1 days;Adult male heads;RNA-seq", + "submission" : "4529", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L1 4.0 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 1 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L1 4.0 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult male heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_ananas/submission_4647.sorted", - "fly_simul/submission_4647.sorted", - "fly/submission_4647.sorted", - "fly_dp/submission_4647.sorted", - "fly_dmoj/submission_4647.sorted", - "fly_yakuba/submission_4647.sorted", - "fly_virilis/submission_4647.sorted" + "worm/INTRONS_4530", + "worm/POLYA_4530", + "worm/SLSITES_4530" ], - "submission" : "4647", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 20 days;Adult male heads;RNA-seq", + "submission" : "4530", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L2 17.75 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 20 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L2 17.75 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Male heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4649.sorted", - "fly/submission_4649.sorted", - "fly_virilis/submission_4649.sorted", - "fly_dp/submission_4649.sorted", - "fly_simul/submission_4649.sorted", - "fly_ananas/submission_4649.sorted", - "fly_dmoj/submission_4649.sorted" + "worm/INTRONS_4531", + "worm/SLSITES_4531", + "worm/POLYA_4531" ], - "submission" : "4649", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 4 days;Male heads;RNA-seq", + "submission" : "4531", + "Strain" : "N2", + "label" : "total-RNA;N2;L2-4 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "L2-4 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "testes", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/submission_4650.sorted", - "fly_yakuba/submission_4650.sorted", - "fly_virilis/submission_4650.sorted", - "fly_simul/submission_4650.sorted", - "fly_ananas/submission_4650.sorted", - "fly_dmoj/submission_4650.sorted", - "fly/submission_4650.sorted" + "worm/SLSITES_4532", + "worm/POLYA_4532", + "worm/INTRONS_4532" ], - "submission" : "4650", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Male eclosion + 4 days;testes;RNA-seq", + "submission" : "4532", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L3 26.75 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Male eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L3 26.75 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/submission_4651.sorted", - "fly_ananas/submission_4651.sorted", - "fly_dmoj/submission_4651.sorted", - "fly/submission_4651.sorted", - "fly_dp/submission_4651.sorted", - "fly_yakuba/submission_4651.sorted", - "fly_simul/submission_4651.sorted" + "worm/INTRONS_4533", + "worm/SLSITES_4533", + "worm/POLYA_4533" ], - "submission" : "4651", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 1 days;Adult carcass;RNA-seq", + "submission" : "4533", + "Strain" : "N2", + "label" : "total-RNA;N2;L3-1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 1 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "L3-1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult digestive system", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/submission_4652.sorted", - "fly_dp/submission_4652.sorted", - "fly_dmoj/submission_4652.sorted", - "fly_ananas/submission_4652.sorted", - "fly_virilis/submission_4652.sorted", - "fly_yakuba/submission_4652.sorted", - "fly/submission_4652.sorted" + "worm/POLYA_4534", + "worm/INTRONS_4534", + "worm/SLSITES_4534" ], - "submission" : "4652", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 1 days;Adult digestive system;RNA-seq", + "submission" : "4534", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 1 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/submission_4653.sorted", - "fly_ananas/submission_4653.sorted", - "fly_simul/submission_4653.sorted", - "fly_dp/submission_4653.sorted", - "fly_yakuba/submission_4653.sorted", - "fly_dmoj/submission_4653.sorted", - "fly/submission_4653.sorted" + "worm/POLYA_4535", + "worm/INTRONS_4535", + "worm/SLSITES_4535" ], - "submission" : "4653", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 20 days;Adult carcass;RNA-seq", + "submission" : "4535", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult digestive system", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/submission_4654.sorted", - "fly_simul/submission_4654.sorted", - "fly_ananas/submission_4654.sorted", - "fly_dp/submission_4654.sorted", - "fly_dmoj/submission_4654.sorted", - "fly_yakuba/submission_4654.sorted", - "fly/submission_4654.sorted" + "worm/INTRONS_4536", + "worm/POLYA_4536", + "worm/SLSITES_4536" ], - "submission" : "4654", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 20 days;Adult digestive system;RNA-seq", + "submission" : "4536", + "Strain" : "JK1107", + "label" : "total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 20 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "carcass", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/submission_4655.sorted", - "fly_ananas/submission_4655.sorted", - "fly/submission_4655.sorted", - "fly_yakuba/submission_4655.sorted", - "fly_virilis/submission_4655.sorted", - "fly_simul/submission_4655.sorted", - "fly_dmoj/submission_4655.sorted" + "worm/INTRONS_4537", + "worm/POLYA_4537", + "worm/SLSITES_4537" ], - "submission" : "4655", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 4 days;carcass;RNA-seq", + "submission" : "4537", + "Strain" : "JK1107", + "label" : "total-RNA;JK1107;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Digestive system", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/submission_4656.sorted", - "fly_yakuba/submission_4656.sorted", - "fly_virilis/submission_4656.sorted", - "fly_dmoj/submission_4656.sorted", - "fly/submission_4656.sorted", - "fly_dp/submission_4656.sorted", - "fly_ananas/submission_4656.sorted" + "worm/SLSITES_4538", + "worm/INTRONS_4538", + "worm/POLYA_4538" ], - "submission" : "4656", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 4 days;Digestive system;RNA-seq", + "submission" : "4538", + "Strain" : "JK1107", + "label" : "total-RNA;JK1107;L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Central nervous system", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/submission_4657.sorted", - "fly_dmoj/submission_4657.sorted", - "fly_ananas/submission_4657.sorted", - "fly_dp/submission_4657.sorted", - "fly_yakuba/submission_4657.sorted", - "fly/submission_4657.sorted", - "fly_simul/submission_4657.sorted" + "worm/POLYA_4540", + "worm/SLSITES_4540", + "worm/INTRONS_4540" ], - "submission" : "4657", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP) + 2 days;Central nervous system;RNA-seq", + "submission" : "4540", + "Strain" : "dpy28(y1) him-8(e1489)", + "label" : "total-RNA;dpy28(y1) him-8(e1489);Male mid-L4 30 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (WPP) + 2 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Male mid-L4 30 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Central nervous system", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4658.sorted", - "fly_ananas/submission_4658.sorted", - "fly_dmoj/submission_4658.sorted", - "fly_simul/submission_4658.sorted", - "fly/submission_4658.sorted", - "fly_dp/submission_4658.sorted", - "fly_virilis/submission_4658.sorted" + "worm/POLYA_4541", + "worm/INTRONS_4541", + "worm/SLSITES_4541" ], - "submission" : "4658", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;Central nervous system;RNA-seq", + "submission" : "4541", + "Strain" : "dpy28(y1) him-8(e1489)", + "label" : "total-RNA;dpy28(y1) him-8(e1489);Male mid-L4 30 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late third instar larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Male mid-L4 30 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult carcass", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4659.sorted", - "fly_virilis/submission_4659.sorted", - "fly_ananas/submission_4659.sorted", - "fly_dmoj/submission_4659.sorted", - "fly/submission_4659.sorted", - "fly_dp/submission_4659.sorted", - "fly_simul/submission_4659.sorted" + "worm/SLSITES_4542", + "worm/POLYA_4542", + "worm/INTRONS_4542" ], - "submission" : "4659", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;Adult carcass;RNA-seq", + "submission" : "4542", + "Strain" : "dpy28(y1) him-8(e1489)", + "label" : "total-RNA;dpy28(y1) him-8(e1489);Mid-L4 34.25 hrs post-L1 stage larvae;23 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late third instar larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Digestive system", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4660.sorted", - "fly_dp/submission_4660.sorted", - "fly_simul/submission_4660.sorted", - "fly/submission_4660.sorted", - "fly_virilis/submission_4660.sorted", - "fly_dmoj/submission_4660.sorted", - "fly_ananas/submission_4660.sorted" + "worm/INTRONS_4543", + "worm/SLSITES_4543", + "worm/POLYA_4543" ], - "submission" : "4660", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;Digestive system;RNA-seq", + "submission" : "4543", + "Strain" : "N2", + "label" : "total-RNA;N2;Male mid-L4 L4MALE5 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late third instar larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Male mid-L4 L4MALE5 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "fat body", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/submission_4661.sorted", - "fly_ananas/submission_4661.sorted", - "fly_dmoj/submission_4661.sorted", - "fly_yakuba/submission_4661.sorted", - "fly_simul/submission_4661.sorted", - "fly/submission_4661.sorted", - "fly_virilis/submission_4661.sorted" + "worm/SLSITES_4544", + "worm/INTRONS_4544", + "worm/POLYA_4544" ], - "submission" : "4661", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;fat body;RNA-seq", + "submission" : "4544", + "Strain" : "N2", + "label" : "total-RNA;N2;Late Embryonic stage 4.5 hrs post-early Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late third instar larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "salivary glands", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_ananas/submission_4663.sorted", - "fly/submission_4663.sorted", - "fly_yakuba/submission_4663.sorted", - "fly_dmoj/submission_4663.sorted", - "fly_virilis/submission_4663.sorted", - "fly_dp/submission_4663.sorted", - "fly_simul/submission_4663.sorted" + "worm/SLSITES_4546", + "worm/INTRONS_4546", + "worm/POLYA_4546" ], - "submission" : "4663", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Late third instar larvae;salivary glands;RNA-seq", + "submission" : "4546", + "Strain" : "MT10430", + "label" : "total-RNA;MT10430;Mid-L1 4.0 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Late third instar larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L1 4.0 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult female virgin heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dmoj/submission_4664.sorted", - "fly_virilis/submission_4664.sorted", - "fly/submission_4664.sorted", - "fly_ananas/submission_4664.sorted", - "fly_yakuba/submission_4664.sorted", - "fly_simul/submission_4664.sorted", - "fly_dp/submission_4664.sorted" + "worm/INTRONS_4547", + "worm/SLSITES_4547", + "worm/POLYA_4547" ], - "submission" : "4664", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 1 days;Adult female virgin heads;RNA-seq", + "submission" : "4547", + "Strain" : "N2", + "label" : "total-RNA;N2;Early Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 1 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult female virgin heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4665.sorted", - "fly_virilis/submission_4665.sorted", - "fly_ananas/submission_4665.sorted", - "fly/submission_4665.sorted", - "fly_dmoj/submission_4665.sorted", - "fly_simul/submission_4665.sorted", - "fly_dp/submission_4665.sorted" + "worm/INTRONS_4548", + "worm/POLYA_4548", + "worm/SLSITES_4548" ], - "submission" : "4665", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 20 days;Adult female virgin heads;RNA-seq", + "submission" : "4548", + "Strain" : "N2", + "label" : "total-RNA;N2;Early Embryos;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 20 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult female virgin heads", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4666.sorted", - "fly_dp/submission_4666.sorted", - "fly_dmoj/submission_4666.sorted", - "fly_virilis/submission_4666.sorted", - "fly_simul/submission_4666.sorted", - "fly_ananas/submission_4666.sorted", - "fly/submission_4666.sorted" + "worm/INTRONS_4549", + "worm/SLSITES_4549", + "worm/POLYA_4549" ], - "submission" : "4666", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult Female eclosion + 4 days;Adult female virgin heads;RNA-seq", + "submission" : "4549", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-0;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult Female eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-0", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "Adult virgin ovaries", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/submission_4667.sorted", - "fly_ananas/submission_4667.sorted", - "fly_dp/submission_4667.sorted", - "fly_dmoj/submission_4667.sorted", - "fly_yakuba/submission_4667.sorted", - "fly_virilis/submission_4667.sorted", - "fly/submission_4667.sorted" + "worm/SLSITES_4550", + "worm/POLYA_4550", + "worm/INTRONS_4550" ], - "submission" : "4667", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Adult eclosion + 4 days;Adult virgin ovaries;RNA-seq", + "submission" : "4550", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-120;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Adult eclosion + 4 days", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-120", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "fat body", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/submission_4668.sorted", - "fly_dmoj/submission_4668.sorted", - "fly_ananas/submission_4668.sorted", - "fly_virilis/submission_4668.sorted", - "fly_dp/submission_4668.sorted", - "fly/submission_4668.sorted", - "fly_simul/submission_4668.sorted" + "worm/INTRONS_4551", + "worm/POLYA_4551", + "worm/SLSITES_4551" ], - "submission" : "4668", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;Pupae;fat body;RNA-seq", + "submission" : "4551", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-150;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Pupae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-150", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "fat body", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/submission_4669.sorted", - "fly_virilis/submission_4669.sorted", - "fly_ananas/submission_4669.sorted", - "fly_yakuba/submission_4669.sorted", - "fly_simul/submission_4669.sorted", - "fly_dmoj/submission_4669.sorted", - "fly/submission_4669.sorted" + "worm/INTRONS_4552", + "worm/SLSITES_4552", + "worm/POLYA_4552" ], - "submission" : "4669", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP);fat body;RNA-seq", - "category" : "Gene Structure", + "submission" : "4552", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-180;20 degree celsius;RNA-seq", + "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (WPP)", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-180", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "Tissue" : "salivary glands", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/submission_4670.sorted", - "fly_simul/submission_4670.sorted", - "fly_dp/submission_4670.sorted", - "fly/submission_4670.sorted", - "fly_yakuba/submission_4670.sorted", - "fly_dmoj/submission_4670.sorted", - "fly_ananas/submission_4670.sorted" + "worm/POLYA_4553", + "worm/SLSITES_4553", + "worm/INTRONS_4553" ], - "submission" : "4670", - "Strain" : "Oregon R-modENCODE", - "label" : "transfrag;Oregon R-modENCODE;White prepupae (WPP);salivary glands;RNA-seq", + "submission" : "4553", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-210;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "White prepupae (WPP)", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-210", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "10% EtOH", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/4671_merged.sorted", - "fly_yakuba/4671_merged.sorted", - "fly_dmoj/4671_merged.sorted", - "fly/4671_merged.sorted", - "fly_simul/4671_merged.sorted", - "fly_dp/4671_merged.sorted", - "fly_ananas/4671_merged.sorted" + "worm/POLYA_4554", + "worm/SLSITES_4554", + "worm/INTRONS_4554" ], - "submission" : "4671", - "label" : "transfrag;10% EtOH;RNA-seq", + "submission" : "4554", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-240;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-240", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "2.5% EtOH", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4672_merged.sorted", - "fly_simul/4672_merged.sorted", - "fly/4672_merged.sorted", - "fly_virilis/4672_merged.sorted", - "fly_dmoj/4672_merged.sorted", - "fly_dp/4672_merged.sorted", - "fly_ananas/4672_merged.sorted" + "worm/SLSITES_4555", + "worm/INTRONS_4555", + "worm/POLYA_4555" ], - "submission" : "4672", - "label" : "transfrag;2.5% EtOH;RNA-seq", + "submission" : "4555", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-270;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-270", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "5% EtOH", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/4673_merged.sorted", - "fly_virilis/4673_merged.sorted", - "fly_simul/4673_merged.sorted", - "fly/4673_merged.sorted", - "fly_yakuba/4673_merged.sorted", - "fly_dmoj/4673_merged.sorted", - "fly_ananas/4673_merged.sorted" + "worm/INTRONS_4556", + "worm/SLSITES_4556", + "worm/POLYA_4556" ], - "submission" : "4673", - "label" : "transfrag;5% EtOH;RNA-seq", + "submission" : "4556", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-30;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-30", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Caffeine 1.5 mg/ml", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dmoj/4674_merged.sorted", - "fly_yakuba/4674_merged.sorted", - "fly_virilis/4674_merged.sorted", - "fly/4674_merged.sorted", - "fly_dp/4674_merged.sorted", - "fly_ananas/4674_merged.sorted", - "fly_simul/4674_merged.sorted" + "worm/SLSITES_4557", + "worm/POLYA_4557", + "worm/INTRONS_4557" ], - "submission" : "4674", - "label" : "transfrag;Caffeine 1.5 mg/ml;RNA-seq", + "submission" : "4557", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-300;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-300", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Caffeine 2.5 mg/ml", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/4675_merged.sorted", - "fly_yakuba/4675_merged.sorted", - "fly_dmoj/4675_merged.sorted", - "fly_simul/4675_merged.sorted", - "fly_ananas/4675_merged.sorted", - "fly_virilis/4675_merged.sorted", - "fly/4675_merged.sorted" + "worm/INTRONS_4558", + "worm/SLSITES_4558", + "worm/POLYA_4558" ], - "submission" : "4675", - "label" : "transfrag;Caffeine 2.5 mg/ml;RNA-seq", + "submission" : "4558", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-330;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-330", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Caffeine Pre Lethal", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4676_merged.sorted", - "fly_simul/4676_merged.sorted", - "fly_dp/4676_merged.sorted", - "fly/4676_merged.sorted", - "fly_dmoj/4676_merged.sorted", - "fly_virilis/4676_merged.sorted", - "fly_ananas/4676_merged.sorted" + "worm/POLYA_4559", + "worm/SLSITES_4559", + "worm/INTRONS_4559" ], - "submission" : "4676", - "label" : "transfrag;Caffeine Pre Lethal;RNA-seq", + "submission" : "4559", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-360;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-360", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "0.05M Cdcl2", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/4677_merged.sorted", - "fly_yakuba/4677_merged.sorted", - "fly_dp/4677_merged.sorted", - "fly_virilis/4677_merged.sorted", - "fly_ananas/4677_merged.sorted", - "fly/4677_merged.sorted", - "fly_dmoj/4677_merged.sorted" + "worm/INTRONS_4561", + "worm/POLYA_4561", + "worm/SLSITES_4561" ], - "submission" : "4677", - "label" : "transfrag;0.05M Cdcl2;RNA-seq", + "submission" : "4561", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-420;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-420", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "0.05 mM CdCl2 salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4678_merged.sorted", - "fly_virilis/4678_merged.sorted", - "fly_ananas/4678_merged.sorted", - "fly/4678_merged.sorted", - "fly_simul/4678_merged.sorted", - "fly_dp/4678_merged.sorted", - "fly_dmoj/4678_merged.sorted" + "worm/INTRONS_4562", + "worm/POLYA_4562", + "worm/SLSITES_4562" ], - "submission" : "4678", - "label" : "transfrag;0.05 mM CdCl2 salt;RNA-seq", + "submission" : "4562", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-450;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-450", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "0.05 mM CdCl2 salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/4679_merged.sorted", - "fly_virilis/4679_merged.sorted", - "fly_yakuba/4679_merged.sorted", - "fly_dmoj/4679_merged.sorted", - "fly/4679_merged.sorted", - "fly_ananas/4679_merged.sorted", - "fly_dp/4679_merged.sorted" + "worm/POLYA_4563", + "worm/INTRONS_4563", + "worm/SLSITES_4563" ], - "submission" : "4679", - "label" : "transfrag;0.05 mM CdCl2 salt;RNA-seq", + "submission" : "4563", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-480;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-480", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "0.1M Cdcl2", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4680_merged.sorted", - "fly_simul/4680_merged.sorted", - "fly_dp/4680_merged.sorted", - "fly_ananas/4680_merged.sorted", - "fly/4680_merged.sorted", - "fly_virilis/4680_merged.sorted", - "fly_dmoj/4680_merged.sorted" + "worm/POLYA_4564", + "worm/SLSITES_4564", + "worm/INTRONS_4564" ], - "submission" : "4680", - "label" : "transfrag;0.1M Cdcl2;RNA-seq", + "submission" : "4564", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-510;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-510", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Temperature" : "", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/4681_merged.sorted", - "fly_yakuba/4681_merged.sorted", - "fly_ananas/4681_merged.sorted", - "fly_simul/4681_merged.sorted", - "fly_dp/4681_merged.sorted", - "fly/4681_merged.sorted", - "fly_dmoj/4681_merged.sorted" + "worm/INTRONS_4565", + "worm/POLYA_4565", + "worm/SLSITES_4565" ], - "submission" : "4681", - "label" : "transfrag;;RNA-seq", + "submission" : "4565", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-540;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-540", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Temperature" : "", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4682_merged.sorted", - "fly_virilis/4682_merged.sorted", - "fly_dp/4682_merged.sorted", - "fly_simul/4682_merged.sorted", - "fly_dmoj/4682_merged.sorted", - "fly_ananas/4682_merged.sorted", - "fly/4682_merged.sorted" + "worm/POLYA_4566", + "worm/SLSITES_4566", + "worm/INTRONS_4566" ], - "submission" : "4682", - "label" : "transfrag;;RNA-seq", + "submission" : "4566", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-570;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-570", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "0.5 mM Copper salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/4683_merged.sorted", - "fly_dmoj/4683_merged.sorted", - "fly_dp/4683_merged.sorted", - "fly/4683_merged.sorted", - "fly_virilis/4683_merged.sorted", - "fly_ananas/4683_merged.sorted", - "fly_yakuba/4683_merged.sorted" + "worm/SLSITES_4567", + "worm/INTRONS_4567", + "worm/POLYA_4567" ], - "submission" : "4683", - "label" : "transfrag;0.5 mM Copper salt;RNA-seq", + "submission" : "4567", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-600;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-600", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "15 mM Copper salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/4684_merged.sorted", - "fly_yakuba/4684_merged.sorted", - "fly_simul/4684_merged.sorted", - "fly_dmoj/4684_merged.sorted", - "fly_ananas/4684_merged.sorted", - "fly/4684_merged.sorted", - "fly_dp/4684_merged.sorted" + "worm/POLYA_4568", + "worm/INTRONS_4568", + "worm/SLSITES_4568" ], - "submission" : "4684", - "label" : "transfrag;15 mM Copper salt;RNA-seq", + "submission" : "4568", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-60;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-60", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Temperature" : "", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/4685_merged.sorted", - "fly_virilis/4685_merged.sorted", - "fly_dmoj/4685_merged.sorted", - "fly/4685_merged.sorted", - "fly_dp/4685_merged.sorted", - "fly_ananas/4685_merged.sorted", - "fly_yakuba/4685_merged.sorted" + "worm/SLSITES_4569", + "worm/INTRONS_4569", + "worm/POLYA_4569" ], - "submission" : "4685", - "label" : "transfrag;;RNA-seq", + "submission" : "4569", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-630;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-630", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Paraquat 10 mM salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4686_merged.sorted", - "fly_simul/4686_merged.sorted", - "fly_ananas/4686_merged.sorted", - "fly_dp/4686_merged.sorted", - "fly_dmoj/4686_merged.sorted", - "fly_virilis/4686_merged.sorted", - "fly/4686_merged.sorted" + "worm/INTRONS_4570", + "worm/SLSITES_4570", + "worm/POLYA_4570" ], - "submission" : "4686", - "label" : "transfrag;Paraquat 10 mM salt;RNA-seq", + "submission" : "4570", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-660;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-660", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Paraquat 5 mM salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/4687_merged.sorted", - "fly_ananas/4687_merged.sorted", - "fly_virilis/4687_merged.sorted", - "fly/4687_merged.sorted", - "fly_yakuba/4687_merged.sorted", - "fly_dmoj/4687_merged.sorted", - "fly_dp/4687_merged.sorted" + "worm/POLYA_4571", + "worm/SLSITES_4571", + "worm/INTRONS_4571" ], - "submission" : "4687", - "label" : "transfrag;Paraquat 5 mM salt;RNA-seq", + "submission" : "4571", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-690;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-690", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Rotenone 2ug/ml", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/4688_merged.sorted", - "fly_simul/4688_merged.sorted", - "fly_dp/4688_merged.sorted", - "fly_virilis/4688_merged.sorted", - "fly_ananas/4688_merged.sorted", - "fly/4688_merged.sorted", - "fly_dmoj/4688_merged.sorted" + "worm/INTRONS_4572", + "worm/SLSITES_4572", + "worm/POLYA_4572" ], - "submission" : "4688", - "label" : "transfrag;Rotenone 2ug/ml;RNA-seq", + "submission" : "4572", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-720;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-720", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "Rotenone 8ug/ml", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dp/4689_merged.sorted", - "fly_dmoj/4689_merged.sorted", - "fly_yakuba/4689_merged.sorted", - "fly_ananas/4689_merged.sorted", - "fly/4689_merged.sorted", - "fly_virilis/4689_merged.sorted", - "fly_simul/4689_merged.sorted" + "worm/SLSITES_4573", + "worm/POLYA_4573", + "worm/INTRONS_4573" ], - "submission" : "4689", - "label" : "transfrag;Rotenone 8ug/ml;RNA-seq", + "submission" : "4573", + "Strain" : "N2", + "label" : "total-RNA;N2;N2 EE 50-90;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "N2 EE 50-90", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "4.5 mM Zinc salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dmoj/4690_merged.sorted", - "fly_virilis/4690_merged.sorted", - "fly_simul/4690_merged.sorted", - "fly_dp/4690_merged.sorted", - "fly/4690_merged.sorted", - "fly_yakuba/4690_merged.sorted", - "fly_ananas/4690_merged.sorted" + "worm/INTRONS_4574", + "worm/POLYA_4574", + "worm/SLSITES_4574" ], - "submission" : "4690", - "label" : "transfrag;4.5 mM Zinc salt;RNA-seq", + "submission" : "4574", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L1 4 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L1 4 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "Compound" : "5 mM Zinc salt", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/4691_merged.sorted", - "fly_dmoj/4691_merged.sorted", - "fly_dp/4691_merged.sorted", - "fly/4691_merged.sorted", - "fly_ananas/4691_merged.sorted", - "fly_yakuba/4691_merged.sorted", - "fly_simul/4691_merged.sorted" + "worm/SLSITES_4575", + "worm/INTRONS_4575", + "worm/POLYA_4575" ], - "submission" : "4691", - "label" : "transfrag;5 mM Zinc salt;RNA-seq", + "submission" : "4575", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L2 17.75 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L2 17.75 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", @@ -36027,535 +36544,6204 @@ "target" : "mRNA", "principal_investigator" : "Waterston, R.", "Tracks" : [ - "worm/submission_4692.sorted" + "worm/POLYA_4576", + "worm/SLSITES_4576", + "worm/INTRONS_4576" ], - "submission" : "4692", - "Strain" : "daf-2(e1370)", - "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", + "submission" : "4576", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-N2 L3-1 26.75 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "Developmental-Stage" : "Mid-N2 L3-1 26.75 hrs post-L1 stage larvae", "organism" : "C. elegans", - "temperature" : "25 degree celsius" + "temperature" : "20 degree celsius" }, { - "technique" : "ChIP-chip", - "whole-organism" : "Tissue:fat-body:SC:1", - "Tissue" : "fat body", - "factor" : "Replication-Origin", - "target" : "DNA Replication", - "principal_investigator" : "MacAlpine, D.", + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH", - "fly_simul/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH", - "fly_dp/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH", - "fly_dmoj/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH", - "fly_ananas/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH", - "fly/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH", - "fly_virilis/MacAlpine_CGH_TISSUES/L3_Fatbody_CGH" + "worm/SLSITES_4577", + "worm/INTRONS_4577", + "worm/POLYA_4577" ], - "submission" : "4717", - "Strain" : "Oregon-R", - "label" : "Replication-Origin;Tissue:fat-body:SC:1;Oregon-R;L3 stage wandering stage larvae;fat body;ChIP-chip", - "category" : "Replication", + "submission" : "4577", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "L3 stage wandering stage larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { - "technique" : "ChIP-chip", - "whole-organism" : "Tissue:Midgut:DM:1", - "Tissue" : "midgut", - "factor" : "Replication-Origin", - "target" : "DNA Replication", - "principal_investigator" : "MacAlpine, D.", + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/MacAlpine_CGH_TISSUES/L3_Midgut_CGH", - "fly_dmoj/MacAlpine_CGH_TISSUES/L3_Midgut_CGH", - "fly_yakuba/MacAlpine_CGH_TISSUES/L3_Midgut_CGH", - "fly_dp/MacAlpine_CGH_TISSUES/L3_Midgut_CGH", - "fly/MacAlpine_CGH_TISSUES/L3_Midgut_CGH", - "fly_simul/MacAlpine_CGH_TISSUES/L3_Midgut_CGH", - "fly_ananas/MacAlpine_CGH_TISSUES/L3_Midgut_CGH" + "worm/POLYA_4578", + "worm/SLSITES_4578", + "worm/INTRONS_4578" ], - "submission" : "4718", - "Strain" : "Oregon-R", - "label" : "Replication-Origin;Tissue:Midgut:DM:1;Oregon-R;L3 stage wandering stage larvae;midgut;ChIP-chip", - "category" : "Replication", + "submission" : "4578", + "Strain" : "N2", + "label" : "total-RNA;N2;Mid-L4 34.25 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "L3 stage wandering stage larvae", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 34.25 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_ananas/1182-4H.sub_4720.sorted", - "fly/1182-4H.sub_4720.sorted", - "fly_virilis/1182-4H.sub_4720.sorted", - "fly_dp/1182-4H.sub_4720.sorted", + "worm/POLYA_4579", + "worm/INTRONS_4579", + "worm/SLSITES_4579" + ], + "submission" : "4579", + "Strain" : "N2", + "label" : "total-RNA;N2;Late Embryonic stage 4.5 hrs post-early Embryos;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/POLYA_4580", + "worm/SLSITES_4580", + "worm/INTRONS_4580" + ], + "submission" : "4580", + "Strain" : "N2", + "label" : "total-RNA;N2;Late Embryonic stage 4.5 hrs post-early Embryos;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage 4.5 hrs post-early Embryos", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/INTRONS_4581", + "worm/POLYA_4581", + "worm/SLSITES_4581" + ], + "submission" : "4581", + "Strain" : "N2", + "label" : "total-RNA;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young Adult (pre-gravid) 46 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/SLSITES_4582", + "worm/INTRONS_4582", + "worm/POLYA_4582" + ], + "submission" : "4582", + "Strain" : "N2", + "label" : "total-RNA;N2;Young Adult (pre-gravid) 46 hrs post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young Adult (pre-gravid) 46 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/POLYA_4583", + "worm/SLSITES_4583", + 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"target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/miRNA_W5393" + ], + "submission" : "5393", + "Strain" : "spe-9(hc88)", + "label" : "small-RNA;spe-9(hc88);Young adult DAY1post-L4 molt stage larvae;23 degree celsius;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young adult DAY1post-L4 molt stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" + }, + { + "technique" : "integrated-gene-model", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/miRNA_W5394" + ], + "submission" : "5394", + "Strain" : "spe-9(hc88)", + "label" : "small-RNA;spe-9(hc88);Young adult DAY1post-L4 molt stage larvae;23 degree celsius;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young adult DAY1post-L4 molt stage larvae", + "organism" : "C. elegans", + 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"type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dmoj/submission_5447.sorted", + "fly_ananas/submission_5447.sorted", + "fly_dp/submission_5447.sorted", + "fly_simul/submission_5447.sorted", + "fly_virilis/submission_5447.sorted", + "fly_yakuba/submission_5447.sorted", + "fly/submission_5447.sorted" + ], + "Cell-Line" : "S2R+-CG16788", + "submission" : "5447", + "label" : "transfrag;S2R+-CG16788;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dmoj/submission_5448.sorted", + "fly_dp/submission_5448.sorted", + "fly_yakuba/submission_5448.sorted", + "fly/submission_5448.sorted", + "fly_virilis/submission_5448.sorted", + "fly_simul/submission_5448.sorted", + "fly_ananas/submission_5448.sorted" + ], + "Cell-Line" : "S2R+-CG16901", + "submission" : "5448", + "label" : "transfrag;S2R+-CG16901;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_simul/submission_5449.sorted", + "fly_yakuba/submission_5449.sorted", + "fly_dp/submission_5449.sorted", + "fly_ananas/submission_5449.sorted", + "fly/submission_5449.sorted", + "fly_dmoj/submission_5449.sorted", + "fly_virilis/submission_5449.sorted" + ], + "Cell-Line" : "S2R+-CG17136", + "submission" : "5449", + "label" : "transfrag;S2R+-CG17136;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_yakuba/submission_5450.sorted", + "fly_dmoj/submission_5450.sorted", + "fly/submission_5450.sorted", + "fly_virilis/submission_5450.sorted", + "fly_simul/submission_5450.sorted", + "fly_dp/submission_5450.sorted", + "fly_ananas/submission_5450.sorted" + ], + "Cell-Line" : "S2R+-CG17838", + "submission" : "5450", + "label" : "transfrag;S2R+-CG17838;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_ananas/submission_5451.sorted", + "fly_simul/submission_5451.sorted", + "fly/submission_5451.sorted", + "fly_dmoj/submission_5451.sorted", + "fly_dp/submission_5451.sorted", + "fly_yakuba/submission_5451.sorted", + "fly_virilis/submission_5451.sorted" + ], + "Cell-Line" : "S2R+-CG31716", + "submission" : "5451", + "label" : "transfrag;S2R+-CG31716;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dp/submission_5453.sorted", + "fly_ananas/submission_5453.sorted", + "fly_dmoj/submission_5453.sorted", + "fly_simul/submission_5453.sorted", + "fly_virilis/submission_5453.sorted", + "fly/submission_5453.sorted", + "fly_yakuba/submission_5453.sorted" + ], + "Cell-Line" : "S2R+-CG3613", + "submission" : "5453", + "label" : "transfrag;S2R+-CG3613;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_yakuba/submission_5454.sorted", + "fly_virilis/submission_5454.sorted", + "fly_simul/submission_5454.sorted", + "fly_ananas/submission_5454.sorted", + "fly/submission_5454.sorted", + "fly_dp/submission_5454.sorted", + "fly_dmoj/submission_5454.sorted" + ], + "Cell-Line" : "S2R+-CG4262", + "submission" : "5454", + "label" : "transfrag;S2R+-CG4262;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_virilis/submission_5455.sorted", + "fly_yakuba/submission_5455.sorted", + "fly_dp/submission_5455.sorted", + "fly/submission_5455.sorted", + "fly_simul/submission_5455.sorted", + "fly_dmoj/submission_5455.sorted", + "fly_ananas/submission_5455.sorted" + ], + "Cell-Line" : "S2R+-CG42670", + "submission" : "5455", + "label" : "transfrag;S2R+-CG42670;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_yakuba/submission_5456.sorted", + "fly_dp/submission_5456.sorted", + "fly_ananas/submission_5456.sorted", + "fly/submission_5456.sorted", + "fly_virilis/submission_5456.sorted", + "fly_dmoj/submission_5456.sorted", + "fly_simul/submission_5456.sorted" + ], + "Cell-Line" : "S2R+-CG4602", + "submission" : "5456", + "label" : "transfrag;S2R+-CG4602;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly/submission_5457.sorted", + "fly_ananas/submission_5457.sorted", + "fly_dp/submission_5457.sorted", + "fly_dmoj/submission_5457.sorted", + "fly_yakuba/submission_5457.sorted", + "fly_virilis/submission_5457.sorted", + "fly_simul/submission_5457.sorted" + ], + "Cell-Line" : "S2R+-CG4816", + "submission" : "5457", + "label" : "transfrag;S2R+-CG4816;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_ananas/submission_5458.sorted", + "fly_virilis/submission_5458.sorted", + "fly_dp/submission_5458.sorted", + "fly_simul/submission_5458.sorted", + "fly_yakuba/submission_5458.sorted", + "fly_dmoj/submission_5458.sorted", + "fly/submission_5458.sorted" + ], + "Cell-Line" : "S2R+-CG5099", + "submission" : "5458", + "label" : "transfrag;S2R+-CG5099;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dp/submission_5459.sorted", + "fly_yakuba/submission_5459.sorted", + "fly_simul/submission_5459.sorted", + "fly/submission_5459.sorted", + "fly_ananas/submission_5459.sorted", + "fly_virilis/submission_5459.sorted", + "fly_dmoj/submission_5459.sorted" + ], + "Cell-Line" : "S2R+-CG5442", + "submission" : "5459", + "label" : "transfrag;S2R+-CG5442;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dmoj/submission_5462.sorted", + "fly_virilis/submission_5462.sorted", + "fly/submission_5462.sorted", + "fly_ananas/submission_5462.sorted", + "fly_yakuba/submission_5462.sorted", + "fly_simul/submission_5462.sorted", + "fly_dp/submission_5462.sorted" + ], + "Cell-Line" : "S2R+-CG6203", + "submission" : "5462", + "label" : "transfrag;S2R+-CG6203;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_ananas/submission_5463.sorted", + "fly/submission_5463.sorted", + "fly_yakuba/submission_5463.sorted", + "fly_simul/submission_5463.sorted", + "fly_virilis/submission_5463.sorted", + "fly_dp/submission_5463.sorted", + "fly_dmoj/submission_5463.sorted" + ], + "Cell-Line" : "S2R+-CG6227", + "submission" : "5463", + "label" : "transfrag;S2R+-CG6227;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_simul/submission_5464.sorted", + "fly_dmoj/submission_5464.sorted", + "fly/submission_5464.sorted", + "fly_yakuba/submission_5464.sorted", + "fly_dp/submission_5464.sorted", + "fly_ananas/submission_5464.sorted", + "fly_virilis/submission_5464.sorted" + ], + "Cell-Line" : "S2R+-CG6779", + "submission" : "5464", + "label" : "transfrag;S2R+-CG6779;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dp/submission_5465.sorted", + "fly_dmoj/submission_5465.sorted", + "fly_ananas/submission_5465.sorted", + "fly_virilis/submission_5465.sorted", + "fly_simul/submission_5465.sorted", + "fly_yakuba/submission_5465.sorted", + "fly/submission_5465.sorted" + ], + "Cell-Line" : "S2R+-CG6841", + "submission" : "5465", + "label" : "transfrag;S2R+-CG6841;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_virilis/submission_5466.sorted", + "fly_yakuba/submission_5466.sorted", + "fly_dp/submission_5466.sorted", + "fly/submission_5466.sorted", + "fly_ananas/submission_5466.sorted", + "fly_simul/submission_5466.sorted", + "fly_dmoj/submission_5466.sorted" + ], + "Cell-Line" : "S2R+-CG6987", + "submission" : "5466", + "label" : "transfrag;S2R+-CG6987;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_simul/submission_5467.sorted", + "fly_ananas/submission_5467.sorted", + "fly/submission_5467.sorted", + "fly_yakuba/submission_5467.sorted", + "fly_virilis/submission_5467.sorted", + "fly_dp/submission_5467.sorted", + "fly_dmoj/submission_5467.sorted" + ], + "Cell-Line" : "S2R+-CG7437", + "submission" : "5467", + "label" : "transfrag;S2R+-CG7437;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_virilis/submission_5468.sorted", + "fly_simul/submission_5468.sorted", + "fly_dp/submission_5468.sorted", + "fly_ananas/submission_5468.sorted", + "fly_dmoj/submission_5468.sorted", + "fly/submission_5468.sorted", + "fly_yakuba/submission_5468.sorted" + ], + "Cell-Line" : "S2R+-CG8636", + "submission" : "5468", + "label" : "transfrag;S2R+-CG8636;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dp/submission_5469.sorted", + "fly_dmoj/submission_5469.sorted", + "fly_ananas/submission_5469.sorted", + "fly/submission_5469.sorted", + "fly_yakuba/submission_5469.sorted", + "fly_virilis/submission_5469.sorted", + "fly_simul/submission_5469.sorted" + ], + "Cell-Line" : "S2R+-CG8749", + "submission" : "5469", + "label" : "transfrag;S2R+-CG8749;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly_dmoj/submission_5470.sorted", + "fly_dp/submission_5470.sorted", + "fly/submission_5470.sorted", + "fly_ananas/submission_5470.sorted", + "fly_virilis/submission_5470.sorted", + "fly_simul/submission_5470.sorted", + "fly_yakuba/submission_5470.sorted" + ], + "Cell-Line" : "S2R+-CG9998", + "submission" : "5470", + "label" : "transfrag;S2R+-CG9998;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "integrated-gene-model", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Tracks" : [ + "fly/submission_5471.sorted", + "fly_dmoj/submission_5471.sorted", + "fly_yakuba/submission_5471.sorted", + "fly_ananas/submission_5471.sorted", + "fly_simul/submission_5471.sorted", + "fly_dp/submission_5471.sorted", + "fly_virilis/submission_5471.sorted" + ], + "Cell-Line" : "S2R+-pMK33-C-FLAG-HA Empty Vector", + "submission" : "5471", + "label" : "transfrag;S2R+-pMK33-C-FLAG-HA Empty Vector;Late Embryonic stage;Embryo-derived cell-line;integrated-gene-model", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "1182-4H", + "submission" : "5479", + "label" : "transfrag;1182-4H;Late Embryonic stage;Embryo-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "CME-W1-Cl.8+", + "submission" : "5480", + "label" : "transfrag;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD16-c3", + "submission" : "5482", + "label" : "transfrag;ML-DmD16-c3;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD17-c3", + "submission" : "5483", + "label" : "transfrag;ML-DmD17-c3;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Antenna disc-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD20-c2", + "submission" : "5484", + "label" : "transfrag;ML-DmD20-c2;Larvae 3rd instar;Antenna disc-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Imaginal disc-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD4-c1", + "submission" : "5486", + "label" : "transfrag;ML-DmD4-c1;Larvae 3rd instar;Imaginal disc-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD8", + "submission" : "5487", + "label" : "transfrag;ML-DmD8;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD9", + "submission" : "5488", + "label" : "transfrag;ML-DmD9;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Ventral prothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "CME-L1", + "submission" : "5489", + "label" : "transfrag;CME-L1;Larvae 3rd instar;Ventral prothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Antenna disc-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "ML-DmD20-c5", + "submission" : "5490", + "label" : "transfrag;ML-DmD20-c5;Larvae 3rd instar;Antenna disc-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "S1", + "submission" : "5491", + "label" : "transfrag;S1;Late Embryonic stage;Embryo-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "S2R+", + "submission" : "5492", + "label" : "transfrag;S2R+;Late Embryonic stage;Embryo-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "S3", + "submission" : "5493", + "label" : "transfrag;S3;Late Embryonic stage;Embryo-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "Sg4", + "submission" : "5494", + "label" : "transfrag;Sg4;Late Embryonic stage;Embryo-derived cell-line;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "CME W2", + "submission" : "5495", + "label" : "transfrag;CME W2;Larvae 3rd instar;Dorsal mesothoracic disc;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "Tissue" : "Embryonic/larval hemocyte", + "factor" : "transfrag", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "mbn2", + "submission" : "5496", + "label" : "transfrag;mbn2;Late Embryonic stage;Embryonic/larval hemocyte;DNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "CNV-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Replication-Copy-Number", + "target" : "Copy Number Variation", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_ananas/MacAlpine_CNV_PairEnded/CNV_PE_KC167", + "fly_yakuba/MacAlpine_CNV_PairEnded/CNV_PE_KC167", + "fly/MacAlpine_CNV_PairEnded/CNV_PE_KC167", + "fly_simul/MacAlpine_CNV_PairEnded/CNV_PE_KC167", + "fly_virilis/MacAlpine_CNV_PairEnded/CNV_PE_KC167", + "fly_dmoj/MacAlpine_CNV_PairEnded/CNV_PE_KC167", + "fly_dp/MacAlpine_CNV_PairEnded/CNV_PE_KC167" + ], + "Cell-Line" : "Kc167", + "submission" : "5523", + "label" : "Replication-Copy-Number;Kc167;Late Embryonic stage;Embryo-derived cell-line;CNV-seq", + "category" : "Copy Number Variation", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "CNV-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Replication-Copy-Number", + "target" : "Copy Number Variation", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_yakuba/MacAlpine_CNV_PairEnded/CNV_PE_S2", + "fly/MacAlpine_CNV_PairEnded/CNV_PE_S2", + "fly_virilis/MacAlpine_CNV_PairEnded/CNV_PE_S2", + "fly_ananas/MacAlpine_CNV_PairEnded/CNV_PE_S2", + "fly_simul/MacAlpine_CNV_PairEnded/CNV_PE_S2", + "fly_dp/MacAlpine_CNV_PairEnded/CNV_PE_S2", + "fly_dmoj/MacAlpine_CNV_PairEnded/CNV_PE_S2" + ], + "Cell-Line" : "S2-DRSC", + "submission" : "5524", + "label" : "Replication-Copy-Number;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;CNV-seq", + "category" : "Copy Number Variation", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "CNV-seq", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "Replication-Copy-Number", + "target" : "Copy Number Variation", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_yakuba/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8", + "fly_dp/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8", + "fly_dmoj/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8", + "fly_virilis/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8", + "fly_ananas/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8", + "fly/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8", + "fly_simul/MacAlpine_CNV_PairEnded/CNV_PE_Cl.8" + ], + "Cell-Line" : "CME-W1-Cl.8+", + "submission" : "5525", + "label" : "Replication-Copy-Number;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;CNV-seq", + "category" : "Copy Number Variation", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "base pair" : "50 base pair", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Replication-Timing", + "target" : "DNA Replication", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_ananas/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5526/Late_S-Phase", + "fly/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5526/Late_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5526/Late_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5526/Late_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5526/Late_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5526/MidLate_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5526/Late_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5526/MidEarly_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5526/Early_S-Phase", + "fly/MacAlpine_REPLISEQ_5526/Late_S-Phase" + ], + "Cell-Line" : "Kc167", + "submission" : "5526", + "label" : "Replication-Timing;Kc167;Late Embryonic stage;50 base pair;Embryo-derived cell-line;DNA-seq", + "category" : "Replication", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "base pair" : "50 base pair", + "Tissue" : "Embryo-derived cell-line", + "factor" : "Replication-Timing", + "target" : "DNA Replication", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_dp/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5527/MidLate_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5527/Early_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5527/Late_S-Phase", + "fly/MacAlpine_REPLISEQ_5527/MidEarly_S-Phase" + ], + "Cell-Line" : "S2-DRSC", + "submission" : "5527", + "label" : "Replication-Timing;S2-DRSC;Late Embryonic stage;50 base pair;Embryo-derived cell-line;DNA-seq", + "category" : "Replication", + "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", + "organism" : "D. melanogaster" + }, + { + "technique" : "DNA-seq", + "base pair" : "50 base pair", + "Tissue" : "CNS-derived cell-line", + "factor" : "Replication-Timing", + "target" : "DNA Replication", + "principal_investigator" : "MacAlpine, D.", + "Tracks" : [ + "fly_ananas/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase", + "fly/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase", + "fly/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly/MacAlpine_REPLISEQ_5528/Late_S-Phase", + "fly_yakuba/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase", + "fly_ananas/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5528/Early_S-Phase", + "fly_dp/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_simul/MacAlpine_REPLISEQ_5528/MidLate_S-Phase", + "fly_virilis/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase", + "fly_dmoj/MacAlpine_REPLISEQ_5528/MidEarly_S-Phase" + ], + "Cell-Line" : "ML-DmBG3-c2", + "submission" : "5528", + "label" : "Replication-Timing;ML-DmBG3-c2;Larvae 3rd instar;50 base pair;CNS-derived cell-line;DNA-seq", + "category" : "Replication", + "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", + "organism" : "D. melanogaster" + }, + { + "technique" : "RNA-seq", + "Tissue" : "Embryo-derived cell-line", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Celniker, S.", + "Cell-Line" : "Kc167", + "submission" : "5952", + "label" : "total-RNA;Kc167;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Embryo-derived cell-line", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Tracks" : [ - "fly_ananas/CME_L1.sub_4721.merged", - "fly_virilis/CME_L1.sub_4721.merged", - "fly_dmoj/CME_L1.sub_4721.merged", - "fly_yakuba/CME_L1.sub_4721.merged", - "fly_simul/CME_L1.sub_4721.merged", - "fly_dp/CME_L1.sub_4721.merged", - "fly/CME_L1.sub_4721.merged" - ], - "Cell-Line" : "CME-L1", - "submission" : "4721", - "label" : "transfrag;CME-L1;RNA-seq", + "Cell-Line" : "S2-DRSC", + "submission" : "5953", + "label" : "total-RNA;S2-DRSC;Late Embryonic stage;Embryo-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Late Embryonic stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "CNS-derived cell-line", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Tracks" : [ - "fly_virilis/CME_W2.sub_4722.merged", - "fly_dmoj/CME_W2.sub_4722.merged", - "fly_yakuba/CME_W2.sub_4722.merged", - "fly_ananas/CME_W2.sub_4722.merged", - "fly_simul/CME_W2.sub_4722.merged", - "fly/CME_W2.sub_4722.merged", - "fly_dp/CME_W2.sub_4722.merged" - ], - "Cell-Line" : "CME-W2", - "submission" : "4722", - "label" : "transfrag;CME-W2;RNA-seq", + "Cell-Line" : "ML-DmBG3-c2", + "submission" : "5954", + "label" : "total-RNA;ML-DmBG3-c2;Larvae 3rd instar;CNS-derived cell-line;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Dorsal mesothoracic disc", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Tracks" : [ - "fly/GM2.sub_4723.merged", - "fly_yakuba/GM2.sub_4723.merged", - "fly_simul/GM2.sub_4723.merged", - "fly_dp/GM2.sub_4723.merged", - "fly_virilis/GM2.sub_4723.merged", - "fly_dmoj/GM2.sub_4723.merged", - "fly_ananas/GM2.sub_4723.merged" - ], - "Cell-Line" : "GM2", - "submission" : "4723", - "label" : "transfrag;GM2;RNA-seq", + "Cell-Line" : "CME-W1-Cl.8+", + "submission" : "5955", + "label" : "total-RNA;CME-W1-Cl.8+;Larvae 3rd instar;Dorsal mesothoracic disc;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Larvae 3rd instar", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Ovary", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Tracks" : [ - "fly_simul/Kc167.sub_4724.merged", - "fly_dmoj/Kc167.sub_4724.merged", - "fly_ananas/Kc167.sub_4724.merged", - "fly_yakuba/Kc167.sub_4724.merged", - "fly/Kc167.sub_4724.merged", - "fly_virilis/Kc167.sub_4724.merged", - "fly_dp/Kc167.sub_4724.merged" - ], - "Cell-Line" : "Kc167", - "submission" : "4724", - "label" : "transfrag;Kc167;RNA-seq", + "Cell-Line" : "OvarySomaticSheet", + "submission" : "5964", + "label" : "total-RNA;OvarySomaticSheet;Adult stage;Ovary;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Ovary", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Tracks" : [ - "fly_dmoj/MBN2.sub_4725.merged", - "fly_yakuba/MBN2.sub_4725.merged", - "fly_simul/MBN2.sub_4725.merged", - "fly_virilis/MBN2.sub_4725.merged", - "fly_dp/MBN2.sub_4725.merged", - "fly_ananas/MBN2.sub_4725.merged", - "fly/MBN2.sub_4725.merged" - ], - "Cell-Line" : "Mbn2", - "submission" : "4725", - "label" : "transfrag;Mbn2;RNA-seq", + "Cell-Line" : "OvaryStemCells", + "submission" : "5965", + "label" : "total-RNA;OvaryStemCells;Adult stage;Ovary;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Ovary", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", - "Tracks" : [ - "fly_ananas/ML-DmBG1-c1.sub_4726.sorted", - "fly_dp/ML-DmBG1-c1.sub_4726.sorted", - "fly_simul/ML-DmBG1-c1.sub_4726.sorted", - "fly/ML-DmBG1-c1.sub_4726.sorted", - "fly_virilis/ML-DmBG1-c1.sub_4726.sorted", - "fly_dmoj/ML-DmBG1-c1.sub_4726.sorted", - "fly_yakuba/ML-DmBG1-c1.sub_4726.sorted" - ], - "Cell-Line" : "ML-DmD17-c3", - "submission" : "4726", - "label" : "transfrag;ML-DmD17-c3;RNA-seq", + "Cell-Line" : "fGS/OSS", + "submission" : "5966", + "label" : "total-RNA;fGS/OSS;Adult stage;Ovary;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Ovary", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Tracks" : [ - "fly_yakuba/ML-DmBG2-c2.sub_4727.merged", - "fly_virilis/ML-DmBG2-c2.sub_4727.merged", - "fly_ananas/ML-DmBG2-c2.sub_4727.merged", - "fly_simul/ML-DmBG2-c2.sub_4727.merged", - "fly_dmoj/ML-DmBG2-c2.sub_4727.merged", - "fly_dp/ML-DmBG2-c2.sub_4727.merged", - "fly/ML-DmBG2-c2.sub_4727.merged" + "fly_simul/6137YAAXX_2.bam.bam.sorted", + "fly_ananas/6137YAAXX_2.bam.bam.sorted", + "fly/6137YAAXX_2.bam.bam.sorted", + "fly_virilis/6137YAAXX_2.bam.bam.sorted", + "fly_dp/6137YAAXX_2.bam.bam.sorted", + "fly_dmoj/6137YAAXX_2.bam.bam.sorted", + "fly_yakuba/6137YAAXX_2.bam.bam.sorted" ], - "Cell-Line" : "ML-DmBG2-c2", - "submission" : "4727", - "label" : "transfrag;ML-DmBG2-c2;RNA-seq", + "Cell-Line" : "OvarySomaticSheet", + "submission" : "5967", + "label" : "total-RNA;OvarySomaticSheet;Adult stage;Ovary;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Ovary", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Tracks" : [ - "fly_dmoj/ML-DmD11.sub_4728.merged", - "fly_dp/ML-DmD11.sub_4728.merged", - "fly_yakuba/ML-DmD11.sub_4728.merged", - "fly/ML-DmD11.sub_4728.merged", - "fly_ananas/ML-DmD11.sub_4728.merged", - "fly_virilis/ML-DmD11.sub_4728.merged", - "fly_simul/ML-DmD11.sub_4728.merged" + "fly_dp/6137YAAXX_3.bam.bam.sorted", + "fly_dmoj/6137YAAXX_3.bam.bam.sorted", + "fly_virilis/6137YAAXX_3.bam.bam.sorted", + "fly_ananas/6137YAAXX_3.bam.bam.sorted", + "fly_yakuba/6137YAAXX_3.bam.bam.sorted", + "fly_simul/6137YAAXX_3.bam.bam.sorted", + "fly/6137YAAXX_3.bam.bam.sorted" ], - "Cell-Line" : "ML-DmD11", - "submission" : "4728", - "label" : "transfrag;ML-DmD11;RNA-seq", + "Cell-Line" : "OvaryStemCells", + "submission" : "5968", + "label" : "total-RNA;OvaryStemCells;Adult stage;Ovary;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "Tissue" : "Ovary", + "factor" : "total-RNA", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Tracks" : [ - "fly_dp/ML-DmD16-c3.sub_4729.merged", - "fly_dmoj/ML-DmD16-c3.sub_4729.merged", - "fly_yakuba/ML-DmD16-c3.sub_4729.merged", - "fly_virilis/ML-DmD16-c3.sub_4729.merged", - "fly_ananas/ML-DmD16-c3.sub_4729.merged", - "fly_simul/ML-DmD16-c3.sub_4729.merged", - "fly/ML-DmD16-c3.sub_4729.merged" + "fly_dp/6137YAAXX_4.bam.bam.sorted", + "fly_ananas/6137YAAXX_4.bam.bam.sorted", + "fly_dmoj/6137YAAXX_4.bam.bam.sorted", + "fly/6137YAAXX_4.bam.bam.sorted", + "fly_yakuba/6137YAAXX_4.bam.bam.sorted", + "fly_virilis/6137YAAXX_4.bam.bam.sorted", + "fly_simul/6137YAAXX_4.bam.bam.sorted" ], - "Cell-Line" : "ML-DmD16-c3", - "submission" : "4729", - "label" : "transfrag;ML-DmD16-c3;RNA-seq", + "Cell-Line" : "fGS/OSS", + "submission" : "5969", + "label" : "total-RNA;fGS/OSS;Adult stage;Ovary;RNA-seq", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { - "technique" : "RNA-seq", + "technique" : "integrated-gene-model", + "Tissue" : "Ovary", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Tracks" : [ - "fly_yakuba/ML-DmD17-c3.sub_4730.merged", - "fly_ananas/ML-DmD17-c3.sub_4730.merged", - "fly/ML-DmD17-c3.sub_4730.merged", - "fly_dp/ML-DmD17-c3.sub_4730.merged", - "fly_virilis/ML-DmD17-c3.sub_4730.merged", - "fly_simul/ML-DmD17-c3.sub_4730.merged", - "fly_dmoj/ML-DmD17-c3.sub_4730.merged" + "fly_simul/OSS_all_redo.sorted.bam.bam.sorted", + "fly_dmoj/OSS_all_redo.sorted.bam.bam.sorted", + "fly_dp/OSS_all_redo.sorted.bam.bam.sorted", + "fly_virilis/OSS_all_redo.sorted.bam.bam.sorted", + "fly/OSS_all_redo.sorted.bam.bam.sorted", + "fly_yakuba/OSS_all_redo.sorted.bam.bam.sorted", + "fly_ananas/OSS_all_redo.sorted.bam.bam.sorted" ], - "Cell-Line" : "ML-DmD17-c3", - "submission" : "4730", - "label" : "transfrag;ML-DmD17-c3;RNA-seq", + "Cell-Line" : "OvarySomaticSheet", + "submission" : "5970", + "label" : "transfrag;OvarySomaticSheet;Adult stage;Ovary;integrated-gene-model", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { - "technique" : "RNA-seq", + "technique" : "integrated-gene-model", + "Tissue" : "Ovary", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Tracks" : [ - "fly_dmoj/ML-DmD20-c5.sub_4731.merged", - "fly_virilis/ML-DmD20-c5.sub_4731.merged", - "fly_simul/ML-DmD20-c5.sub_4731.merged", - "fly_yakuba/ML-DmD20-c5.sub_4731.merged", - "fly_dp/ML-DmD20-c5.sub_4731.merged", - "fly_ananas/ML-DmD20-c5.sub_4731.merged", - "fly/ML-DmD20-c5.sub_4731.merged" + "fly_yakuba/OSC_all_redo.sorted.bam.bam.sorted", + "fly_simul/OSC_all_redo.sorted.bam.bam.sorted", + "fly_dp/OSC_all_redo.sorted.bam.bam.sorted", + "fly/OSC_all_redo.sorted.bam.bam.sorted", + "fly_dmoj/OSC_all_redo.sorted.bam.bam.sorted", + "fly_ananas/OSC_all_redo.sorted.bam.bam.sorted", + "fly_virilis/OSC_all_redo.sorted.bam.bam.sorted" ], - "Cell-Line" : "ML-DmD20-c5", - "submission" : "4731", - "label" : "transfrag;ML-DmD20-c5;RNA-seq", + "Cell-Line" : "OvaryStemCells", + "submission" : "5971", + "label" : "transfrag;OvaryStemCells;Adult stage;Ovary;integrated-gene-model", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { - "technique" : "RNA-seq", + "technique" : "integrated-gene-model", + "Tissue" : "Ovary", "factor" : "transfrag", "target" : "mRNA", "principal_investigator" : "Celniker, S.", "Tracks" : [ - "fly_ananas/ML-DmD21.sub_4732.sorted", - "fly/ML-DmD21.sub_4732.sorted", - "fly_yakuba/ML-DmD21.sub_4732.sorted", - "fly_dp/ML-DmD21.sub_4732.sorted", - "fly_virilis/ML-DmD21.sub_4732.sorted", - "fly_simul/ML-DmD21.sub_4732.sorted", - "fly_dmoj/ML-DmD21.sub_4732.sorted" + "fly_virilis/fGS_all_redo.sorted.bam.bam.sorted", + "fly/fGS_all_redo.sorted.bam.bam.sorted", + "fly_yakuba/fGS_all_redo.sorted.bam.bam.sorted", + "fly_dmoj/fGS_all_redo.sorted.bam.bam.sorted", + "fly_simul/fGS_all_redo.sorted.bam.bam.sorted", + "fly_dp/fGS_all_redo.sorted.bam.bam.sorted", + "fly_ananas/fGS_all_redo.sorted.bam.bam.sorted" ], - "Cell-Line" : "ML-DmD21", - "submission" : "4732", - "label" : "transfrag;ML-DmD21;RNA-seq", + "Cell-Line" : "fGS/OSS", + "submission" : "5972", + "label" : "transfrag;fGS/OSS;Adult stage;Ovary;integrated-gene-model", "category" : "Gene Structure", "type" : "data set", + "Developmental-Stage" : "Adult stage", "organism" : "D. melanogaster" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", + "submission" : "6435", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer daf-2(e1370) 91 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Dauer daf-2(e1370) 91 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", + "submission" : "6436", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "total-RNA", + "target" : "mRNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_yakuba/ML-DmD32.sub_4733.merged", - "fly_ananas/ML-DmD32.sub_4733.merged", - "fly_virilis/ML-DmD32.sub_4733.merged", - "fly_simul/ML-DmD32.sub_4733.merged", - "fly/ML-DmD32.sub_4733.merged", - "fly_dp/ML-DmD32.sub_4733.merged", - "fly_dmoj/ML-DmD32.sub_4733.merged" + "worm/submission_6437.sorted" ], - "Cell-Line" : "ML-DmD32", - "submission" : "4733", - "label" : "transfrag;ML-DmD32;RNA-seq", + "submission" : "6437", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", + "factor" : "total-RNA", "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/ML-DmD4-c1.sub_4734.merged", - "fly_dmoj/ML-DmD4-c1.sub_4734.merged", - "fly_ananas/ML-DmD4-c1.sub_4734.merged", - "fly_yakuba/ML-DmD4-c1.sub_4734.merged", - "fly_virilis/ML-DmD4-c1.sub_4734.merged", - "fly_dp/ML-DmD4-c1.sub_4734.merged", - "fly/ML-DmD4-c1.sub_4734.merged" + "worm/submission_6438.sorted" ], - "Cell-Line" : "ML-DmD4-c1", - "submission" : "4734", - "label" : "transfrag;ML-DmD4-c1;RNA-seq", + "submission" : "6438", + "Strain" : "daf-2(e1370)", + "label" : "total-RNA;daf-2(e1370);Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae;25 degree celsius;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "25 degree celsius" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly/ML-DmD8.sub_4735.sorted", - "fly_dp/ML-DmD8.sub_4735.sorted", - "fly_yakuba/ML-DmD8.sub_4735.sorted", - "fly_dmoj/ML-DmD8.sub_4735.sorted", - "fly_virilis/ML-DmD8.sub_4735.sorted", - "fly_simul/ML-DmD8.sub_4735.sorted", - "fly_ananas/ML-DmD8.sub_4735.sorted" + "worm/Egg_s_3.S-3.WS220.soap.sam_sorted" ], - "Cell-Line" : "ML-DmD8", - "submission" : "4735", - "label" : "transfrag;ML-DmD8;RNA-seq", + "submission" : "6496", + "Strain" : "N2", + "label" : "small-RNA;N2;Mixed stage of Embryos;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mixed stage of Embryos", + "organism" : "C. elegans" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly/ML-DmD9.sub_4736.sorted", - "fly_simul/ML-DmD9.sub_4736.sorted", - "fly_dp/ML-DmD9.sub_4736.sorted", - "fly_yakuba/ML-DmD9.sub_4736.sorted", - "fly_dmoj/ML-DmD9.sub_4736.sorted", - "fly_ananas/ML-DmD9.sub_4736.sorted", - "fly_virilis/ML-DmD9.sub_4736.sorted" + "worm/L1_s_5.S-3.WS220.soap.sam_sorted" ], - "Cell-Line" : "ML-DmD9", - "submission" : "4736", - "label" : "transfrag;ML-DmD9;RNA-seq", + "submission" : "6497", + "Strain" : "N2", + "label" : "small-RNA;N2;Mid-L1 4 hrs post-L1 stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L1 4 hrs post-L1 stage larvae", + "organism" : "C. elegans" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_simul/S1.sub_4737.merged", - "fly_dp/S1.sub_4737.merged", - "fly/S1.sub_4737.merged", - "fly_virilis/S1.sub_4737.merged", - "fly_dmoj/S1.sub_4737.merged", - "fly_ananas/S1.sub_4737.merged", - "fly_yakuba/S1.sub_4737.merged" + "worm/L2_s_6.S-3.WS220.soap.sam1_header.sam_sorted" ], - "Cell-Line" : "S1", - "submission" : "4737", - "label" : "transfrag;S1;RNA-seq", + "submission" : "6498", + "Strain" : "N2", + "label" : "small-RNA;N2;Mid-L2 14 hrs post-L1 stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L2 14 hrs post-L1 stage larvae", + "organism" : "C. elegans" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_ananas/S2Rplus.sub_4738.merged", - "fly_dp/S2Rplus.sub_4738.merged", - "fly_dmoj/S2Rplus.sub_4738.merged", - "fly_yakuba/S2Rplus.sub_4738.merged", - "fly/S2Rplus.sub_4738.merged", - "fly_virilis/S2Rplus.sub_4738.merged", - "fly_simul/S2Rplus.sub_4738.merged" + "worm/L3_s_7.S-3.WS220.soap.sam1_header.sam_sorted" ], - "Cell-Line" : "S2R", - "submission" : "4738", - "label" : "transfrag;S2R;RNA-seq", + "submission" : "6499", + "Strain" : "N2", + "label" : "small-RNA;N2;Mid-L3 25 hrs post-L1 stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L3 25 hrs post-L1 stage larvae", + "organism" : "C. elegans" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_dmoj/S3.sub_4739.merged", - "fly_virilis/S3.sub_4739.merged", - "fly_simul/S3.sub_4739.merged", - "fly/S3.sub_4739.merged", - "fly_dp/S3.sub_4739.merged", - "fly_yakuba/S3.sub_4739.merged", - "fly_ananas/S3.sub_4739.merged" + "worm/L4_s_8.S-3.WS220.soap.sam1_header.sam" ], - "Cell-Line" : "S3", - "submission" : "4739", - "label" : "transfrag;S3;RNA-seq", + "submission" : "6500", + "Strain" : "N2", + "label" : "small-RNA;N2;Mid-L4 36 hrs post-L1 stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Mid-L4 36 hrs post-L1 stage larvae", + "organism" : "C. elegans" }, { "technique" : "RNA-seq", - "factor" : "transfrag", - "target" : "mRNA", - "principal_investigator" : "Celniker, S.", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "fly_virilis/Sg4.sub_4740.sorted", - "fly_dp/Sg4.sub_4740.sorted", - "fly_dmoj/Sg4.sub_4740.sorted", - "fly_yakuba/Sg4.sub_4740.sorted", - "fly_simul/Sg4.sub_4740.sorted", - "fly/Sg4.sub_4740.sorted", - "fly_ananas/Sg4.sub_4740.sorted" + "worm/YA_Adult_s_1.S-3.WS220.soap.sam1_header.sam" ], - "Cell-Line" : "Sg4", - "submission" : "4740", - "label" : "transfrag;Sg4;RNA-seq", + "submission" : "6501", + "Strain" : "N2", + "label" : "small-RNA;N2;Young adult 48 hrs post-L1 stage larvae;RNA-seq", "category" : "Gene Structure", "type" : "data set", - "organism" : "D. melanogaster" + "Developmental-Stage" : "Young adult 48 hrs post-L1 stage larvae", + "organism" : "C. elegans" }, { - "technique" : "RACE", + "technique" : "RNA-seq", "factor" : "small-RNA", "target" : "small RNA", - "principal_investigator" : "Piano, F.", - "submission" : "4815", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/yMale_dpyhim_s_6.S-3.WS220.soap.sam_sorted" + ], + "submission" : "6502", + "Strain" : "dpy28(y1) him-8(e1489)", + "label" : "small-RNA;dpy28(y1) him-8(e1489);Young Adult Males;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young Adult Males", + "organism" : "C. elegans" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/YA_spe9day0_merged_ws220.soap.sam.bam.sorted" + ], + "submission" : "6503", + "Strain" : "spe-9(hc88)", + "label" : "small-RNA;spe-9(hc88);Young adult DAY0 post-L4 molt stage larvae;23 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young adult DAY0 post-L4 molt stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/YA_spe9day5_s_2.S3_ws220.soap.sam.bam.sorted" + ], + "submission" : "6504", + "Strain" : "spe-9(hc88)", + "label" : "small-RNA;spe-9(hc88);Adult 5 days post-L4 stage larvae;23 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Adult 5 days post-L4 stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/YA_spe9day8_merged_ws220.soap.sam.bam.sorted" + ], + "submission" : "6505", + "Strain" : "spe-9(hc88)", + "label" : "small-RNA;spe-9(hc88);Adult spe-9(hc88) 8 days post-L4 molt stage larvae;23 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Adult spe-9(hc88) 8 days post-L4 molt stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/YA_spe9day212_s_5.S3_ws220.soap.sam_sorted" + ], + "submission" : "6506", + "Strain" : "spe-9(hc88)", + "label" : "small-RNA;spe-9(hc88);Adult 12 days post-L4 stage larvae;23 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Adult 12 days post-L4 stage larvae", + "organism" : "C. elegans", + "temperature" : "23 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/submission_6507.sorted" + ], + "submission" : "6507", "Strain" : "N2", - "label" : "small-RNA;N2;Mixed Population Worms;25 degree celsius;RACE", - "category" : "RNA expression profiling", + "label" : "small-RNA;N2;Young adult DAY1post-L4 molt stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Mixed Population Worms", + "Developmental-Stage" : "Young adult DAY1post-L4 molt stage larvae", "organism" : "C. elegans", - "temperature" : "25 degree celsius" + "temperature" : "20 degree celsius" }, { - "technique" : "DNA-tiling-array", - "factor" : "HIS-72", - "target" : "Chromatin Structure", - "principal_investigator" : "Henikoff, S.", + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", "Tracks" : [ - "worm/HenikoffNUCL/Embryo_Mononucleosomes" + "worm/submission_6508.sorted" ], - "submission" : "5326", - "Strain" : "JJ2061", - "label" : "HIS-72;JJ2061;Mixed Embryos;DNA-tiling-array", - "category" : "Chromatin structure", + "submission" : "6508", + "Strain" : "N2", + "label" : "small-RNA;N2;Young adult DAY1post-L4 molt stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", "type" : "data set", - "Developmental-Stage" : "Mixed Embryos", - "organism" : "C. elegans" + "Developmental-Stage" : "Young adult DAY1post-L4 molt stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/submission_6509.sorted" + ], + "submission" : "6509", + "Strain" : "N2", + "label" : "small-RNA;N2;Young adult DAY1post-L4 molt stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "Young adult DAY1post-L4 molt stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" + }, + { + "technique" : "RNA-seq", + "factor" : "small-RNA", + "target" : "small RNA", + "principal_investigator" : "Waterston, R.", + "Tracks" : [ + "worm/submission_6510.sorted" + ], + "submission" : "6510", + "Strain" : "N2", + "label" : "small-RNA;N2;L1 arrest 24 hr post-L1 stage larvae;20 degree celsius;RNA-seq", + "category" : "Gene Structure", + "type" : "data set", + "Developmental-Stage" : "L1 arrest 24 hr post-L1 stage larvae", + "organism" : "C. elegans", + "temperature" : "20 degree celsius" } ] } diff --git a/htdocs/publications b/htdocs/publications deleted file mode 120000 index 871f569..0000000 --- a/htdocs/publications +++ /dev/null @@ -1 +0,0 @@ -../data/publications/ \ No newline at end of file diff --git a/perl/lib/perl/5.10.1/auto/VM-EC2/.packlist b/perl/lib/perl/5.10.1/auto/VM-EC2/.packlist new file mode 100644 index 0000000..a2d59cd --- /dev/null +++ b/perl/lib/perl/5.10.1/auto/VM-EC2/.packlist @@ -0,0 +1,78 @@ +/modencode/perl/man/man3/VM::EC2.3pm +/modencode/perl/man/man3/VM::EC2::AvailabilityZone.3pm +/modencode/perl/man/man3/VM::EC2::BlockDevice.3pm +/modencode/perl/man/man3/VM::EC2::BlockDevice::Attachment.3pm 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Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2 3pm" +.TH VM::EC2 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2 \- Control the Amazon EC2 and Eucalyptus Clouds +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 2 +\& # set environment variables EC2_ACCESS_KEY, EC2_SECRET_KEY and/or EC2_URL +\& # to fill in arguments automatically +\& +\& ## IMAGE AND INSTANCE MANAGEMENT +\& # get new EC2 object +\& my $ec2 = VM::EC2\->new(\-access_key => \*(Aqaccess key id\*(Aq, +\& \-secret_key => \*(Aqaws_secret_key\*(Aq, +\& \-endpoint => \*(Aqhttp://ec2.amazonaws.com\*(Aq); +\& +\& # fetch an image by its ID +\& my $image = $ec2\->describe_images(\*(Aqami\-12345\*(Aq); +\& +\& # get some information about the image +\& my $architecture = $image\->architecture; +\& my $description = $image\->description; +\& my @devices = $image\->blockDeviceMapping; +\& for my $d (@devices) { +\& print $d\->deviceName,"\en"; +\& print $d\->snapshotId,"\en"; +\& print $d\->volumeSize,"\en"; +\& } +\& +\& # run two instances +\& my @instances = $image\->run_instances(\-key_name =>\*(AqMy_key\*(Aq, +\& \-security_group=>\*(Aqdefault\*(Aq, +\& \-min_count =>2, +\& \-instance_type => \*(Aqt1.micro\*(Aq) +\& or die $ec2\->error_str; +\& +\& # wait for both instances to reach "running" or other terminal state +\& $ec2\->wait_for_instances(@instances); +\& +\& # print out both instance\*(Aqs current state and DNS name +\& for my $i (@instances) { +\& my $status = $i\->current_status; +\& my $dns = $i\->dnsName; +\& print "$i: [$status] $dns\en"; +\& } +\& +\& # tag both instances with Role "server" +\& foreach (@instances) {$_\->add_tag(Role=>\*(Aqserver\*(Aq); +\& +\& # stop both instances +\& foreach (@instances) {$_\->stop} +\& +\& # find instances tagged with Role=Server that are +\& # stopped, change the user data and restart. +\& @instances = $ec2\->describe_instances({\*(Aqtag:Role\*(Aq => \*(AqServer\*(Aq, +\& \*(Aqrun\-state\-name\*(Aq => \*(Aqstopped\*(Aq}); +\& for my $i (@instances) { +\& $i\->userData(\*(AqSecure\-mode: off\*(Aq); +\& $i\->start or warn "Couldn\*(Aqt start $i: ",$i\->error_str; +\& } +\& +\& # create an image from both instance, tag them, and make +\& # them public +\& for my $i (@instances) { +\& my $img = $i\->create_image("Autoimage from $i","Test image"); +\& $img\->add_tags(Name => "Autoimage from $i", +\& Role => \*(AqServer\*(Aq, +\& Status=> \*(AqProduction\*(Aq); +\& $img\->make_public(1); +\& } +\& +\& ## KEY MANAGEMENT +\& +\& # retrieve the name and fingerprint of the first instance\*(Aqs +\& # key pair +\& my $kp = $instances[0]\->keyPair; +\& print $instances[0], ": keypair $kp=",$kp\->fingerprint,"\en"; +\& +\& # create a new key pair +\& $kp = $ec2\->create_key_pair(\*(AqMy Key\*(Aq); +\& +\& # get the private key from this key pair and write it to a disk file +\& # in ssh\-compatible format +\& my $private_key = $kp\->private_key; +\& open (my $f,\*(Aq>MyKeypair.rsa\*(Aq) or die $!; +\& print $f $private_key; +\& close $f; +\& +\& # Import a preexisting SSH key +\& my $public_key = \*(Aqssh\-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQC8o...\*(Aq; +\& $key = $ec2\->import_key_pair(\*(AqNewKey\*(Aq,$public_key); +\& +\& ## SECURITY GROUPS AND FIREWALL RULES +\& # Create a new security group +\& my $group = $ec2\->create_security_group(\-name => \*(AqNewGroup\*(Aq, +\& \-description => \*(Aqexample\*(Aq); +\& +\& # Add a firewall rule +\& $group\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => 80, +\& \-source_ip => [\*(Aq192.168.2.0/24\*(Aq,\*(Aq192.168.2.1/24\*(Aq}); +\& +\& # Write rules back to Amazon +\& $group\->update; +\& +\& # Print current firewall rules +\& print join ("\en",$group\->ipPermissions),"\en"; +\& +\& ## VOLUME && SNAPSHOT MANAGEMENT +\& +\& # find existing volumes that are available +\& my @volumes = $ec2\->describe_volumes({status=>\*(Aqavailable\*(Aq}); +\& +\& # back \*(Aqem all up to snapshots +\& foreach (@volumes) {$_\->snapshot(\*(AqBackup on \*(Aq.localtime)} +\& +\& # find a stopped instance in first volume\*(Aqs availability zone and +\& # attach the volume to the instance using /dev/sdg +\& my $vol = $volumes[0]; +\& my $zone = $vol\->availabilityZone; +\& @instances = $ec2\->describe_instances({\*(Aqavailability\-zone\*(Aq=> $zone, +\& \*(Aqrun\-state\-name\*(Aq => $stopped); +\& $instances[0]\->attach_volume($vol=>\*(Aq/dev/sdg\*(Aq) if @instances; +\& +\& # create a new 20 gig volume +\& $vol = $ec2\->create_volume(\-availability_zone=> \*(Aqus\-east\-1a\*(Aq, +\& \-size => 20); +\& $ec2\->wait_for_volumes($vol); +\& print "Volume $vol is ready!\en" if $vol\->current_status eq \*(Aqavailable\*(Aq; +\& +\& # create a new elastic address and associate it with an instance +\& my $address = $ec2\->allocate_address(); +\& $instances[0]\->associate_address($address); +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This is an interface to the 2011\-05\-15 version of the Amazon \s-1AWS\s0 \s-1API\s0 +(http://aws.amazon.com/ec2). It was written provide access to the new +tag and metadata interface that is not currently supported by +Net::Amazon::EC2, as well as to provide developers with an extension +mechanism for the \s-1API\s0. This library will also support the Eucalyptus +open source cloud (http://open.eucalyptus.com). +.PP +The main interface is the \s-1VM::EC2\s0 object, which provides methods for +interrogating the Amazon \s-1EC2\s0, launching instances, and managing +instance lifecycle. These methods return the following major object +classes which act as specialized interfaces to \s-1AWS:\s0 +.PP +.Vb 12 +\& VM::EC2::BlockDevice \-\- A block device +\& VM::EC2::BlockDevice::Attachment \-\- Attachment of a block device to an EC2 instance +\& VM::EC2::BlockDevice::EBS \-\- An elastic block device +\& VM::EC2::BlockDevice::Mapping \-\- Mapping of a virtual storage device to a block device +\& VM::EC2::BlockDevice::Mapping::EBS \-\- Mapping of a virtual storage device to an EBS block device +\& VM::EC2::Group \-\- Security groups +\& VM::EC2::Image \-\- Amazon Machine Images (AMIs) +\& VM::EC2::Instance \-\- Virtual machine instances +\& VM::EC2::Instance::Metadata \-\- Access to runtime metadata from running instances +\& VM::EC2::Region \-\- Availability regions +\& VM::EC2::Snapshot \-\- EBS snapshots +\& VM::EC2::Tag \-\- Metadata tags +.Ve +.PP +In addition, there are several utility classes: +.PP +.Vb 6 +\& VM::EC2::Generic \-\- Base class for all AWS objects +\& VM::EC2::Error \-\- Error messages +\& VM::EC2::Dispatch \-\- Maps AWS XML responses onto perl object classes +\& VM::EC2::ReservationSet \-\- Hidden class used for describe_instances() request; +\& The reservation Ids are copied into the Instance +\& object. +.Ve +.PP +The interface provided by these modules is based on that described at +http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/. The +following caveats apply: +.PP +.Vb 4 +\& 1) Not all of the Amazon API is currently implemented. Specifically, +\& calls dealing with Virtual Private Clouds (VPC), cluster management, +\& and spot instances are not currently supported. +\& See L for a list of all the unimplemented API calls. +\& +\& 2) For consistency with common Perl coding practices, method calls +\& are lowercase and words in long method names are separated by +\& underscores. The Amazon API prefers mixed case. So in the Amazon +\& API the call to fetch instance information is "DescribeInstances", +\& while in VM::EC2, the method is "describe_instances". To avoid +\& annoyance, if you use the mixed case form for a method name, the +\& Perl autoloader will automatically translate it to underscores for +\& you, and vice\-versa; this means you can call either +\& $ec2\->describe_instances() or $ec2\->DescribeInstances(). +\& +\& 3) Named arguments passed to methods are all lowercase, use +\& underscores to separate words and start with hyphens. +\& In other words, if the AWS API calls for an argument named +\& "InstanceId" to be passed to the "DescribeInstances" call, then +\& the corresponding Perl function will look like: +\& +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-12345\*(Aq) +\& +\& In most cases automatic case translation will be performed for you +\& on arguments. So in the previous example, you could use +\& \-InstanceId as well as \-instance_id. The exception +\& is when an absurdly long argument name was replaced with an +\& abbreviated one as described below. In this case, you must use +\& the documented argument name. +\& +\& In a small number of cases, when the parameter name was absurdly +\& long, it has been abbreviated. For example, the +\& "Placement.AvailabilityZone" parameter has been represented as +\& \-placement_zone and not \-placement_availability_zone. See the +\& documentation for these cases. +\& +\& 4) For each of the describe_foo() methods (where "foo" is a type of +\& resource such as "instance"), you can fetch the resource by using +\& their IDs either with the long form: +\& +\& $ec2\->describe_foo(\-foo_id=>[\*(Aqa\*(Aq,\*(Aqb\*(Aq,\*(Aqc\*(Aq]), +\& +\& or a shortcut form: +\& +\& $ec2\->describe_foo(\*(Aqa\*(Aq,\*(Aqb\*(Aq,\*(Aqc\*(Aq); +\& +\& 5) When the API calls for a list of arguments named Arg.1, Arg.2, +\& then the Perl interface allows you to use an anonymous array for +\& the consecutive values. For example to call describe_instances() +\& with multiple instance IDs, use: +\& +\& @i = $ec2\->describe_instances(\-instance_id=>[\*(Aqi\-12345\*(Aq,\*(Aqi\-87654\*(Aq]) +\& +\& 6) All Filter arguments are represented as a \-filter argument whose value is +\& an anonymous hash: +\& +\& @i = $ec2\->describe_instances(\-filter=>{architecture=>\*(Aqi386\*(Aq, +\& \*(Aqtag:Name\*(Aq =>\*(AqWebServer\*(Aq}) +\& +\& If there are no other arguments you wish to pass, you can omit the +\& \-filter argument and just pass a hashref: +\& +\& @i = $ec2\->describe_instances({architecture=>\*(Aqi386\*(Aq, +\& \*(Aqtag:Name\*(Aq =>\*(AqWebServer\*(Aq}) +\& +\& For any filter, you may represent multiple OR arguments as an arrayref: +\& +\& @i = $ec2\->describe\-instances({\*(Aqinstance\-state\-name\*(Aq=>[\*(Aqstopped\*(Aq,\*(Aqterminated\*(Aq]}) +\& +\& When adding or removing tags, the \-tag argument uses the same syntax. +\& +\& 7) The tagnames of each XML object returned from AWS are converted into methods +\& with the same name and typography. So the tag in a +\& DescribeInstancesResponse, becomes: +\& +\& $instance\->privateIpAddress +\& +\& You can also use the more Perlish form \-\- this is equivalent: +\& +\& $instance\->private_ip_address +\& +\& Methods that correspond to complex objects in the XML hierarchy +\& return the appropriate Perl object. For example, an instance\*(Aqs +\& blockDeviceMapping() method returns an object of type +\& VM::EC2::BlockDevice::Mapping. +\& +\& All objects have a fields() method that will return the XML +\& tagnames listed in the AWS specifications. +\& +\& @fields = sort $instance\->fields; +\& # \*(AqamiLaunchIndex\*(Aq, \*(Aqarchitecture\*(Aq, \*(AqblockDeviceMapping\*(Aq, ... +\& +\& 8) Whenever an object has a unique ID, string overloading is used so that +\& the object interpolates the ID into the string. For example, when you +\& print a VM::EC2::Volume object, or use it in another string context, +\& then it will appear as the string "vol\-123456". Nevertheless, it will +\& continue to be usable for method calls. +\& +\& ($v) = $ec2\->describe_volumes(); +\& print $v,"\en"; # prints as "vol\-123456" +\& $zone = $v\->availabilityZone; # acts like an object +\& +\& 9) Many objects have convenience methods that invoke the AWS API on your +\& behalf. For example, instance objects have a current_status() method that returns +\& the run status of the object, as well as start(), stop() and terminate() +\& methods that control the instance\*(Aqs lifecycle. +\& +\& if ($instance\->current_status eq \*(Aqrunning\*(Aq) { +\& $instance\->stop; +\& } +\& +\& 10) Calls to AWS that have failed for one reason or another (invalid +\& parameters, communications problems, service interruptions) will +\& return undef and set the VM::EC2\->is_error() method to true. The +\& error message and its code can then be recovered by calling +\& VM::EC2\->error. +\& +\& $i = $ec2\->describe_instance(\*(Aqi\-123456\*(Aq); +\& unless ($i) { +\& warn \*(AqGot no instance. Message was: \*(Aq,$ec2\->error; +\& } +\& +\& You may also elect to raise an exception when an error occurs. +\& See the new() method for details. +.Ve +.SH "CORE METHODS" +.IX Header "CORE METHODS" +This section describes the \s-1VM::EC2\s0 constructor, accessor methods, and +methods relevant to error handling. +.ie n .SS "$ec2 = \s-1VM::EC2\-\s0>new(\-access_key=>$id,\-secret_key=>$key,\-endpoint=>$url)" +.el .SS "\f(CW$ec2\fP = \s-1VM::EC2\-\s0>new(\-access_key=>$id,\-secret_key=>$key,\-endpoint=>$url)" +.IX Subsection "$ec2 = VM::EC2->new(-access_key=>$id,-secret_key=>$key,-endpoint=>$url)" +Create a new Amazon access object. Required parameters are: +.PP +.Vb 1 +\& \-access_key Access ID for an authorized user +\& +\& \-secret_key Secret key corresponding to the Access ID +\& +\& \-endpoint The URL for making API requests +\& +\& \-raise_error If true, throw an exception. +\& +\& \-print_error If true, print errors to STDERR. +.Ve +.PP +One or more of \-access_key, \-secret_key and \-endpoint can be omitted +if the environment variables \s-1EC2_ACCESS_KEY\s0, \s-1EC2_SECRET_KEY\s0 and +\&\s-1EC2_URL\s0 are defined. +.PP +To use a Eucalyptus cloud, please provide the appropriate endpoint +\&\s-1URL\s0. +.PP +By default, when the Amazon \s-1API\s0 reports an error, such as attempting +to perform an invalid operation on an instance, the corresponding +method will return empty and the error message can be recovered from +\&\f(CW$ec2\fR\->\fIerror()\fR. However, if you pass \-raise_error=>1 to \fInew()\fR, the module +will instead raise a fatal error, which you can trap with eval{} and +report with $@: +.PP +.Vb 5 +\& eval { +\& $ec2\->some_dangerous_operation(); +\& $ec2\->another_dangerous_operation(); +\& }; +\& print STDERR "something bad happened: $@" if $@; +.Ve +.PP +The error object can be retrieved with \f(CW$ec2\fR\->\fIerror()\fR as before. +.ie n .SS "$access_key = $ec2\->access_key(<$new_access_key>)" +.el .SS "\f(CW$access_key\fP = \f(CW$ec2\fP\->access_key(<$new_access_key>)" +.IX Subsection "$access_key = $ec2->access_key(<$new_access_key>)" +Get or set the \s-1ACCESS\s0 \s-1KEY\s0 +.ie n .SS "$secret = $ec2\->secret(<$new_secret>)" +.el .SS "\f(CW$secret\fP = \f(CW$ec2\fP\->secret(<$new_secret>)" +.IX Subsection "$secret = $ec2->secret(<$new_secret>)" +Get or set the \s-1SECRET\s0 \s-1KEY\s0 +.ie n .SS "$endpoint = $ec2\->endpoint(<$new_endpoint>)" +.el .SS "\f(CW$endpoint\fP = \f(CW$ec2\fP\->endpoint(<$new_endpoint>)" +.IX Subsection "$endpoint = $ec2->endpoint(<$new_endpoint>)" +Get or set the \s-1ENDPOINT\s0 \s-1URL\s0. +.ie n .SS "$ec2\->raise_error($boolean)" +.el .SS "\f(CW$ec2\fP\->raise_error($boolean)" +.IX Subsection "$ec2->raise_error($boolean)" +Change the handling of error conditions. Pass a true value to cause +Amazon \s-1API\s0 errors to raise a fatal error. Pass false to make methods +return undef. In either case, you can detect the error condition +by calling \fIis_error()\fR and fetch the error message using \fIerror()\fR. This +method will also return the current state of the raise error flag. +.ie n .SS "$ec2\->print_error($boolean)" +.el .SS "\f(CW$ec2\fP\->print_error($boolean)" +.IX Subsection "$ec2->print_error($boolean)" +Change the handling of error conditions. Pass a true value to cause +Amazon \s-1API\s0 errors to print error messages to \s-1STDERR\s0. Pass false to +cancel this behavior. +.ie n .SS "$boolean = $ec2\->is_error" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->is_error" +.IX Subsection "$boolean = $ec2->is_error" +If a method fails, it will return undef. However, some methods, such +as \fIdescribe_images()\fR, will also return undef if no resources matches +your search criteria. Call \fIis_error()\fR to distinguish the two +eventualities: +.PP +.Vb 5 +\& @images = $ec2\->describe_images(\-owner=>\*(Aq29731912785\*(Aq); +\& unless (@images) { +\& die "Error: ",$ec2\->error if $ec2\->is_error; +\& print "No appropriate images found\en"; +\& } +.Ve +.ie n .SS "$err = $ec2\->error" +.el .SS "\f(CW$err\fP = \f(CW$ec2\fP\->error" +.IX Subsection "$err = $ec2->error" +If the most recently-executed method failed, \f(CW$ec2\fR\->\fIerror()\fR will return +the error code and other descriptive information. This method will +return undef if the most recently executed method was successful. +.PP +The returned object is actually an AWS::Error object, which +has two methods named \fIcode()\fR and \fImessage()\fR. If used in a string +context, its operator overloading returns the composite string +\&\*(L"$message [$code]\*(R". +.ie n .SS "$err = $ec2\->error_str" +.el .SS "\f(CW$err\fP = \f(CW$ec2\fP\->error_str" +.IX Subsection "$err = $ec2->error_str" +Same as \fIerror()\fR except it returns the string representation, not the +object. This works better in debuggers and exception handlers. +.SH "EC2 REGIONS AND AVAILABILITY ZONES" +.IX Header "EC2 REGIONS AND AVAILABILITY ZONES" +This section describes methods that allow you to fetch information on +\&\s-1EC2\s0 regions and availability zones. These methods return objects of +type VM::EC2::Region and VM::EC2::AvailabilityZone. +.ie n .SS "@regions = $ec2\->describe_regions(\-region_name=>\e@list)" +.el .SS "\f(CW@regions\fP = \f(CW$ec2\fP\->describe_regions(\-region_name=>\e@list)" +.IX Subsection "@regions = $ec2->describe_regions(-region_name=>@list)" +.ie n .SS "@regionss = $ec2\->describe_regions(@list)" +.el .SS "\f(CW@regionss\fP = \f(CW$ec2\fP\->describe_regions(@list)" +.IX Subsection "@regionss = $ec2->describe_regions(@list)" +Describe regions and return a list of VM::EC2::Region objects. Call +with no arguments to return all regions. You may provide a list of +regions in either of the two forms shown above in order to restrict +the list returned. Glob-style wildcards, such as \*(L"*east\*(R") are allowed. +.ie n .SS "@zones = $ec2\->describe_availability_zones(\-zone_name=>\e@names,\-filter=>\e%filters)" +.el .SS "\f(CW@zones\fP = \f(CW$ec2\fP\->describe_availability_zones(\-zone_name=>\e@names,\-filter=>\e%filters)" +.IX Subsection "@zones = $ec2->describe_availability_zones(-zone_name=>@names,-filter=>%filters)" +.ie n .SS "@zones = $ec2\->describe_availability_zones(@names)" +.el .SS "\f(CW@zones\fP = \f(CW$ec2\fP\->describe_availability_zones(@names)" +.IX Subsection "@zones = $ec2->describe_availability_zones(@names)" +Describe availability zones and return a list of +VM::EC2::AvailabilityZone objects. Call with no arguments to return +all availability regions. You may provide a list of zones in either +of the two forms shown above in order to restrict the list +returned. Glob-style wildcards, such as \*(L"*east\*(R") are allowed. +.PP +If you provide a single argument consisting of a hashref, it is +treated as a \-filter argument. In other words: +.PP +.Vb 1 +\& $ec2\->describe_availability_zones({state=>\*(Aqavailable\*(Aq}) +.Ve +.PP +is equivalent to +.PP +.Vb 1 +\& $ec2\->describe_availability_zones(\-filter=>{state=>\*(Aqavailable\*(Aq}) +.Ve +.PP +Availability zone filters are described at +http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/ApiReference\-query\-DescribeAvailabilityZones.html +.SH "EC2 INSTANCES" +.IX Header "EC2 INSTANCES" +The methods in this section allow you to retrieve information about +\&\s-1EC2\s0 instances, launch new instances, control the instance lifecycle +(e.g. starting and stopping them), and fetching the console output +from instances. +.PP +The primary object manipulated by these methods is +VM::EC2::Instance. Please see the VM::EC2::Instance manual page +for additional methods that allow you to attach and detach volumes, +modify an instance's attributes, and convert instances into images. +.ie n .SS "@instances = $ec2\->describe_instances(\-instance_id=>\e@ids,\-filter=>\e%filters)" +.el .SS "\f(CW@instances\fP = \f(CW$ec2\fP\->describe_instances(\-instance_id=>\e@ids,\-filter=>\e%filters)" +.IX Subsection "@instances = $ec2->describe_instances(-instance_id=>@ids,-filter=>%filters)" +.ie n .SS "@instances = $ec2\->describe_instances(@instance_ids)" +.el .SS "\f(CW@instances\fP = \f(CW$ec2\fP\->describe_instances(@instance_ids)" +.IX Subsection "@instances = $ec2->describe_instances(@instance_ids)" +.ie n .SS "@instances = $ec2\->describe_instances(\e%filters)" +.el .SS "\f(CW@instances\fP = \f(CW$ec2\fP\->describe_instances(\e%filters)" +.IX Subsection "@instances = $ec2->describe_instances(%filters)" +Return a series of VM::EC2::Instance objects. Optional parameters are: +.PP +.Vb 2 +\& \-instance_id ID of the instance(s) to return information on. +\& This can be a string scalar, or an arrayref. +\& +\& \-filter Tags and other filters to apply. +.Ve +.PP +The filter argument is a hashreference in which the keys are the +filter names, and the values are the match strings. Some filters +accept wildcards. +.PP +A typical filter example: +.PP +.Vb 5 +\& $ec2\->describe_instances( +\& \-filter => {\*(Aqblock\-device\-mapping.device\-name\*(Aq=>\*(Aq/dev/sdh\*(Aq, +\& \*(Aqarchitecture\*(Aq => \*(Aqi386\*(Aq, +\& \*(Aqtag:Role\*(Aq => \*(AqServer\*(Aq +\& }); +.Ve +.PP +You may omit the \-filter argument name if there are no other arguments: +.PP +.Vb 3 +\& $ec2\->describe_instances({\*(Aqblock\-device\-mapping.device\-name\*(Aq=>\*(Aq/dev/sdh\*(Aq, +\& \*(Aqarchitecture\*(Aq => \*(Aqi386\*(Aq, +\& \*(Aqtag:Role\*(Aq => \*(AqServer\*(Aq}); +.Ve +.PP +There are a large number of potential filters, which are listed at +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeInstances.html. +.PP +Note that the objects returned from this method are the instances +themselves, and not a reservation set. The reservation \s-1ID\s0 can be +retrieved from each instance by calling its \fIreservationId()\fR method. +.ie n .SS "@i = $ec2\->run_instances(%param)" +.el .SS "\f(CW@i\fP = \f(CW$ec2\fP\->run_instances(%param)" +.IX Subsection "@i = $ec2->run_instances(%param)" +This method will provision and launch one or more instances given an +\&\s-1AMI\s0 \s-1ID\s0. If successful, the method returns a series of +VM::EC2::Instance objects. +.IP "Required parameters:" 4 +.IX Item "Required parameters:" +.Vb 1 +\& \-image_id ID of an AMI to launch +.Ve +.IP "Optional parameters:" 4 +.IX Item "Optional parameters:" +.Vb 10 +\& \-min_count Minimum number of instances to launch [1] +\& \-max_count Maximum number of instances to launch [1] +\& \-key_name Name of the keypair to use +\& \-security_group_id Security group ID to use for this instance. +\& Use an arrayref for multiple group IDs +\& \-security_group Security group name to use for this instance. +\& Use an arrayref for multiple values. +\& \-user_data User data to pass to the instances. Do NOT base64 +\& encode this. It will be done for you. +\& \-instance_type Type of the instance to use. See below for a +\& list. +\& \-availability_zone The availability zone you want to launch the +\& instance into. Call $ec2\->regions for a list. +\& \-zone Short version of \-availability_aone. +\& \-placement_zone Deprecated version of \-availability_zone. +\& \-placement_group An existing placement group to launch the +\& instance into. Applicable to cluster instances +\& only. +\& \-placement_tenancy Specify \*(Aqdedicated\*(Aq to launch the instance on a +\& dedicated server. Only applicable for VPC +\& instances. +\& \-kernel_id ID of the kernel to use for the instances, +\& overriding the kernel specified in the image. +\& \-ramdisk_id ID of the ramdisk to use for the instances, +\& overriding the ramdisk specified in the image. +\& \-block_devices Specify block devices to map onto the instances, +\& overriding the values specified in the image. +\& See below for the syntax of this argument. +\& \-block_device_mapping Alias for \-block_devices. +\& \-monitoring Pass a true value to enable detailed monitoring. +\& \-subnet_id ID of the subnet to launch the instance +\& into. Only applicable for VPC instances. +\& \-termination_protection Pass true to lock the instance so that it +\& cannot be terminated using the API. Use +\& modify_instance() to unset this if youu wish to +\& terminate the instance later. +\& \-disable_api_termination \-\- Same as above. +\& \-shutdown_behavior Pass "stop" (the default) to stop the instance +\& and save its disk state when "shutdown" is called +\& from within the instance. Stopped instances can +\& be restarted later. Pass "terminate" to +\& instead terminate the instance and discard its +\& state completely. +\& \-instance_initiated_shutdown_behavior \-\- Same as above. +\& \-private_ip_address Assign the instance to a specific IP address +\& from a VPC subnet (VPC only). +\& \-client_token Unique identifier that you can provide to ensure +\& idempotency of the request. You can use +\& $ec2\->token() to generate a suitable identifier. +\& See http://docs.amazonwebservices.com/AWSEC2/ +\& latest/UserGuide/Run_Instance_Idempotency.html +.Ve +.IP "Instance types" 4 +.IX Item "Instance types" +The following is the list of instance types currently allowed by +Amazon: +.Sp +.Vb 3 +\& m1.small c1.medium m2.xlarge cc1.4xlarge cg1.4xlarge t1.micro +\& m1.large c1.xlarge m2.2xlarge +\& m1.xlarge m2.4xlarge +.Ve +.IP "Block device syntax" 4 +.IX Item "Block device syntax" +The syntax of \-block_devices is identical to what is used by the +ec2\-run\-instances command-line tool. Borrowing from the manual page of +that tool: +.Sp +The format is '=', where 'block\-device' can be one of the +following: +.Sp +.Vb 2 +\& \- \*(Aqnone\*(Aq: indicates that a block device that would be exposed at the +\& specified device should be suppressed. For example: \*(Aq/dev/sdb=none\*(Aq +\& +\& \- \*(Aqephemeral[0\-3]\*(Aq: indicates that the Amazon EC2 ephemeral store +\& (instance local storage) should be exposed at the specified device. +\& For example: \*(Aq/dev/sdc=ephemeral0\*(Aq. +\& +\& \- \*(Aq[][:[:]]\*(Aq: indicates +\& that an Amazon EBS volume, created from the specified Amazon EBS +\& snapshot, should be exposed at the specified device. The following +\& combinations are supported: +\& +\& \- \*(Aq\*(Aq: the ID of an Amazon EBS snapshot, which must +\& be owned by or restorable by the caller. May be left out if a +\& is specified, creating an empty Amazon EBS volume of +\& the specified size. +\& +\& \- \*(Aq\*(Aq: the size (GiBs) of the Amazon EBS volume to be +\& created. If a snapshot was specified, this may not be smaller +\& than the size of the snapshot itself. +\& +\& \- \*(Aq\*(Aq: indicates whether the Amazon EBS +\& volume should be deleted on instance termination. If not +\& specified, this will default to \*(Aqtrue\*(Aq and the volume will be +\& deleted. +\& +\& Examples: \-block_devices => \*(Aq/dev/sdb=snap\-7eb96d16\*(Aq +\& \-block_devices => \*(Aq/dev/sdc=snap\-7eb96d16:80:false\*(Aq +\& \-block_devices => \*(Aq/dev/sdd=:120\*(Aq +.Ve +.Sp +To provide multiple mappings, use an array reference. In this example, +we launch two 'm1.small' instance in which /dev/sdb is mapped to +ephemeral storage and /dev/sdc is mapped to a new 100 G \s-1EBS\s0 volume: +.Sp +.Vb 5 +\& @i=$ec2\->run_instances(\-image_id => \*(Aqami\-12345\*(Aq, +\& \-min_count => 2, +\& \-block_devices => [\*(Aq/dev/sdb=ephemeral0\*(Aq, +\& \*(Aq/dev/sdc=:100:true\*(Aq] +\& ) +.Ve +.IP "Return value" 4 +.IX Item "Return value" +On success, this method returns a list of VM::EC2::Instance +objects. If called in a scalar context \s-1AND\s0 only one instance was +requested, it will return a single instance object (rather than +returning a list of size one which is then converted into numeric \*(L"1\*(R", +as would be the usual Perl behavior). +.Sp +Note that this behavior is different from the Amazon \s-1API\s0, which +returns a ReservationSet. In this \s-1API\s0, ask the instances for the +the reservation, owner, requester, and group information using +\&\fIreservationId()\fR, \fIownerId()\fR, \fIrequesterId()\fR and \fIgroups()\fR methods. +.IP "Tips" 4 +.IX Item "Tips" +1. If you have a VM::EC2::Image object returned from + \fIDescribe_images()\fR, you may run it using \fIrun_instances()\fR: +.Sp +.Vb 5 +\& my $image = $ec2\->describe_images(\-image_id => \*(Aqami\-12345\*(Aq); +\& $image\->run_instances( \-min_count => 10, +\& \-block_devices => [\*(Aq/dev/sdb=ephemeral0\*(Aq, +\& \*(Aq/dev/sdc=:100:true\*(Aq] +\& ) +.Ve +.Sp +2. It may take a short while for a newly-launched instance to be + returned by \fIdescribe_instances()\fR. You may need to sleep for 1\-2 seconds + before \fIcurrent_status()\fR returns the correct value. +.Sp +3. Each instance object has a \fIcurrent_status()\fR method which will + return the current run state of the instance. You may poll this + method to wait until the instance is running: +.Sp +.Vb 5 +\& my $instance = $ec2\->run_instances(...); +\& sleep 1; +\& while ($instance\->current_status ne \*(Aqrunning\*(Aq) { +\& sleep 5; +\& } +.Ve +.Sp +4. The utility method \fIwait_for_instances()\fR will wait until all + passed instances are in the 'running' or other terminal state. +.Sp +.Vb 2 +\& my @instances = $ec2\->run_instances(...); +\& $ec2\->wait_for_instances(@instances); +.Ve +.ie n .SS "@s = $ec2\->start_instances(\-instance_id=>\e@instance_ids) =head2 @s = $ec2\->start_instances(@instance_ids)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->start_instances(\-instance_id=>\e@instance_ids) =head2 \f(CW@s\fP = \f(CW$ec2\fP\->start_instances(@instance_ids)" +.IX Subsection "@s = $ec2->start_instances(-instance_id=>@instance_ids) =head2 @s = $ec2->start_instances(@instance_ids)" +Start the instances named by \f(CW@instance_ids\fR and return one or more +VM::EC2::Instance::State::Change objects. +.PP +To wait for the all the instance ids to reach their final state +(\*(L"running\*(R" unless an error occurs), call \fIwait_for_instances()\fR. +.PP +Example: +.PP +.Vb 2 +\& # find all stopped instances +\& @instances = $ec2\->describe_instances(\-filter=>{\*(Aqinstance\-state\-name\*(Aq=>\*(Aqstopped\*(Aq}); +\& +\& # start them +\& $ec2\->start_instances(@instances) +\& +\& # pause till they are running (or crashed) +\& $ec2\->wait_for_instances(@instances) +.Ve +.PP +You can also start an instance by calling the object's \fIstart()\fR method: +.PP +.Vb 2 +\& $instances[0]\->start(\*(Aqwait\*(Aq); # start instance and wait for it to +\& # be running +.Ve +.PP +The objects returned by calling \fIstart_instances()\fR indicate the current +and previous states of the instance. The previous state is typically +\&\*(L"stopped\*(R" and the current state is usually \*(L"pending.\*(R" This information +is only current to the time that the \fIstart_instances()\fR method was called. +To get the current run state of the instance, call its \fIstatus()\fR +method: +.PP +.Vb 1 +\& die "ouch!" unless $instances[0]\->current_status eq \*(Aqrunning\*(Aq; +.Ve +.ie n .SS "@s = $ec2\->stop_instances(\-instance_id=>\e@instance_ids,\-force=>1)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->stop_instances(\-instance_id=>\e@instance_ids,\-force=>1)" +.IX Subsection "@s = $ec2->stop_instances(-instance_id=>@instance_ids,-force=>1)" +.ie n .SS "@s = $ec2\->stop_instances(@instance_ids)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->stop_instances(@instance_ids)" +.IX Subsection "@s = $ec2->stop_instances(@instance_ids)" +Stop the instances named by \f(CW@instance_ids\fR and return one or more +VM::EC2::Instance::State::Change objects. In the named parameter +version of this method, you may optionally provide a \-force argument, +which if true, forces the instance to halt without giving it a chance +to run its shutdown procedure (the equivalent of pulling a physical +machine's plug). +.PP +To wait for instances to reach their final state, call +\&\fIwait_for_instances()\fR. +.PP +Example: +.PP +.Vb 2 +\& # find all running instances +\& @instances = $ec2\->describe_instances(\-filter=>{\*(Aqinstance\-state\-name\*(Aq=>\*(Aqrunning\*(Aq}); +\& +\& # stop them immediately and wait for confirmation +\& $ec2\->stop_instances(\-instance_id=>\e@instances,\-force=>1); +\& $ec2\->wait_for_instances(@instances); +.Ve +.PP +You can also stop an instance by calling the object's \fIstart()\fR method: +.PP +.Vb 2 +\& $instances[0]\->stop(\*(Aqwait\*(Aq); # stop first instance and wait for it to +\& # stop completely +.Ve +.ie n .SS "@s = $ec2\->terminate_instances(\-instance_id=>\e@instance_ids)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->terminate_instances(\-instance_id=>\e@instance_ids)" +.IX Subsection "@s = $ec2->terminate_instances(-instance_id=>@instance_ids)" +.ie n .SS "@s = $ec2\->terminate_instances(@instance_ids)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->terminate_instances(@instance_ids)" +.IX Subsection "@s = $ec2->terminate_instances(@instance_ids)" +Terminate the instances named by \f(CW@instance_ids\fR and return one or more +VM::EC2::Instance::State::Change objects. This method will fail +for any instances whose termination protection field is set. +.PP +To wait for the all the instances to reach their final state, call +\&\fIwait_for_instances()\fR. +.PP +Example: +.PP +.Vb 2 +\& # find all instances tagged as "Version 0.5" +\& @instances = $ec2\->describe_instances({\*(Aqtag:Version\*(Aq=>\*(Aq0.5\*(Aq}); +\& +\& # terminate them +\& $ec2\->terminate_instances(@instances); +.Ve +.PP +You can also terminate an instance by calling its \fIterminate()\fR method: +.PP +.Vb 1 +\& $instances[0]\->terminate; +.Ve +.ie n .SS "@s = $ec2\->reboot_instances(\-instance_id=>\e@instance_ids)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->reboot_instances(\-instance_id=>\e@instance_ids)" +.IX Subsection "@s = $ec2->reboot_instances(-instance_id=>@instance_ids)" +.ie n .SS "@s = $ec2\->reboot_instances(@instance_ids)" +.el .SS "\f(CW@s\fP = \f(CW$ec2\fP\->reboot_instances(@instance_ids)" +.IX Subsection "@s = $ec2->reboot_instances(@instance_ids)" +Reboot the instances named by \f(CW@instance_ids\fR and return one or more +VM::EC2::Instance::State::Change objects. +.PP +To wait for the all the instances to reach their final state, call +\&\fIwait_for_instances()\fR. +.PP +You can also reboot an instance by calling its \fIterminate()\fR method: +.PP +.Vb 1 +\& $instances[0]\->reboot; +.Ve +.ie n .SS "$t = $ec2\->token" +.el .SS "\f(CW$t\fP = \f(CW$ec2\fP\->token" +.IX Subsection "$t = $ec2->token" +Return a client token for use with \fIstart_instances()\fR. +.ie n .SS "$ec2\->wait_for_instances(@instances)" +.el .SS "\f(CW$ec2\fP\->wait_for_instances(@instances)" +.IX Subsection "$ec2->wait_for_instances(@instances)" +Wait for all members of the provided list of instances to reach some +terminal state (\*(L"running\*(R", \*(L"stopped\*(R" or \*(L"terminated\*(R"), and then return +a hash reference that maps each instance \s-1ID\s0 to its final state. +.PP +Typical usage: +.PP +.Vb 8 +\& my @instances = $image\->run_instances(\-key_name =>\*(AqMy_key\*(Aq, +\& \-security_group=>\*(Aqdefault\*(Aq, +\& \-min_count =>2, +\& \-instance_type => \*(Aqt1.micro\*(Aq) +\& or die $ec2\->error_str; +\& my $status = $ec2\->wait_for_instances(@instances); +\& my @failed = grep {$status\->{$_} ne \*(Aqrunning\*(Aq} @instances; +\& print "The following failed: @failed\en"; +.Ve +.PP +If no terminal state is reached within a set timeout, then this method +returns undef and sets \f(CW$ec2\fR\->\fIerror_str()\fR to a suitable message. The +timeout, which defaults to 10 minutes (600 seconds), can be get or set +with \f(CW$ec2\fR\->\fIwait_for_timeout()\fR. +.ie n .SS "$ec2\->wait_for_snapshots(@snapshots)" +.el .SS "\f(CW$ec2\fP\->wait_for_snapshots(@snapshots)" +.IX Subsection "$ec2->wait_for_snapshots(@snapshots)" +Wait for all members of the provided list of snapshots to reach some +terminal state (\*(L"completed\*(R", \*(L"error\*(R"), and then return a hash +reference that maps each snapshot \s-1ID\s0 to its final state. +.PP +This method may potentially wait forever. It has no set timeout. Wrap +it in an eval{} and set \fIalarm()\fR if you wish to timeout. +.ie n .SS "$ec2\->wait_for_volumes(@volumes)" +.el .SS "\f(CW$ec2\fP\->wait_for_volumes(@volumes)" +.IX Subsection "$ec2->wait_for_volumes(@volumes)" +Wait for all members of the provided list of volumes to reach some +terminal state (\*(L"available\*(R", \*(L"in-use\*(R", \*(L"deleted\*(R" or \*(L"error\*(R"), and then +return a hash reference that maps each volume \s-1ID\s0 to its final state. +.PP +If no terminal state is reached within a set timeout, then this method +returns undef and sets \f(CW$ec2\fR\->\fIerror_str()\fR to a suitable message. The +timeout, which defaults to 10 minutes (600 seconds), can be get or set +with \f(CW$ec2\fR\->\fIwait_for_timeout()\fR. +.ie n .SS "$ec2\->wait_for_attachments(@attachment)" +.el .SS "\f(CW$ec2\fP\->wait_for_attachments(@attachment)" +.IX Subsection "$ec2->wait_for_attachments(@attachment)" +Wait for all members of the provided list of +VM::EC2::BlockDevice::Attachment objects to reach some terminal state +(\*(L"attached\*(R" or \*(L"detached\*(R"), and then return a hash reference that maps +each attachment to its final state. +.PP +Typical usage: +.PP +.Vb 9 +\& my $i = 0; +\& my $instance = \*(Aqi\-12345\*(Aq; +\& my @attach; +\& foreach (@volume) { +\& push @attach,$_\->attach($instance,\*(Aq/dev/sdf\*(Aq.$i++; +\& } +\& my $s = $ec2\->wait_for_attachments(@attach); +\& my @failed = grep($s\->{$_} ne \*(Aqattached\*(Aq} @attach; +\& warn "did not attach: ",join \*(Aq, \*(Aq,@failed; +.Ve +.PP +If no terminal state is reached within a set timeout, then this method +returns undef and sets \f(CW$ec2\fR\->\fIerror_str()\fR to a suitable message. The +timeout, which defaults to 10 minutes (600 seconds), can be get or set +with \f(CW$ec2\fR\->\fIwait_for_timeout()\fR. +.ie n .SS "$ec2\->wait_for_terminal_state(\e@objects,['list','of','states'] [,$timeout])" +.el .SS "\f(CW$ec2\fP\->wait_for_terminal_state(\e@objects,['list','of','states'] [,$timeout])" +.IX Subsection "$ec2->wait_for_terminal_state(@objects,['list','of','states'] [,$timeout])" +Generic version of the last four methods. Wait for all members of the provided list of Amazon objects +instances to reach some terminal state listed in the second argument, and then return +a hash reference that maps each object \s-1ID\s0 to its final state. +.PP +If a timeout is provided, in seconds, then the method will abort after +waiting the indicated time and return undef. +.ie n .SH "$timeout = $ec2\->wait_for_timeout([$new_timeout]);" +.el .SH "\f(CW$timeout\fP = \f(CW$ec2\fP\->wait_for_timeout([$new_timeout]);" +.IX Header "$timeout = $ec2->wait_for_timeout([$new_timeout]);" +Get or change the timeout for \fIwait_for_instances()\fR, \fIwait_for_attachments()\fR, +and \fIwait_for_volumes()\fR. The timeout is given in seconds, and defaults to +600 (10 minutes). You can set this to 0 to wait forever. +.ie n .SS "$password_data = $ec2\->get_password_data(\-instance_id=>'i\-12345');" +.el .SS "\f(CW$password_data\fP = \f(CW$ec2\fP\->get_password_data(\-instance_id=>'i\-12345');" +.IX Subsection "$password_data = $ec2->get_password_data(-instance_id=>'i-12345');" +.ie n .SS "$password_data = $ec2\->get_password_data('i\-12345');" +.el .SS "\f(CW$password_data\fP = \f(CW$ec2\fP\->get_password_data('i\-12345');" +.IX Subsection "$password_data = $ec2->get_password_data('i-12345');" +For Windows instances, get the administrator's password as a +VM::EC2::Instance::PasswordData object. +.ie n .SS "$output = $ec2\->get_console_output(\-instance_id=>'i\-12345')" +.el .SS "\f(CW$output\fP = \f(CW$ec2\fP\->get_console_output(\-instance_id=>'i\-12345')" +.IX Subsection "$output = $ec2->get_console_output(-instance_id=>'i-12345')" +.ie n .SS "$output = $ec2\->get_console_output('i\-12345');" +.el .SS "\f(CW$output\fP = \f(CW$ec2\fP\->get_console_output('i\-12345');" +.IX Subsection "$output = $ec2->get_console_output('i-12345');" +Return the console output of the indicated instance. The output is +actually a VM::EC2::ConsoleOutput object, but it is +overloaded so that when treated as a string it will appear as a +large text string containing the console output. When treated like an +object it provides \fIinstanceId()\fR and \fItimestamp()\fR methods. +.ie n .SS "@monitoring_state = $ec2\->monitor_instances(@list_of_instanceIds)" +.el .SS "\f(CW@monitoring_state\fP = \f(CW$ec2\fP\->monitor_instances(@list_of_instanceIds)" +.IX Subsection "@monitoring_state = $ec2->monitor_instances(@list_of_instanceIds)" +.ie n .SS "@monitoring_state = $ec2\->monitor_instances(\-instance_id=>\e@instanceIds)" +.el .SS "\f(CW@monitoring_state\fP = \f(CW$ec2\fP\->monitor_instances(\-instance_id=>\e@instanceIds)" +.IX Subsection "@monitoring_state = $ec2->monitor_instances(-instance_id=>@instanceIds)" +This method enables monitoring for the listed instances and returns a +list of VM::EC2::Instance::MonitoringState objects. You can +later use these objects to activate and inactivate monitoring. +.ie n .SS "@monitoring_state = $ec2\->unmonitor_instances(@list_of_instanceIds)" +.el .SS "\f(CW@monitoring_state\fP = \f(CW$ec2\fP\->unmonitor_instances(@list_of_instanceIds)" +.IX Subsection "@monitoring_state = $ec2->unmonitor_instances(@list_of_instanceIds)" +.ie n .SS "@monitoring_state = $ec2\->unmonitor_instances(\-instance_id=>\e@instanceIds)" +.el .SS "\f(CW@monitoring_state\fP = \f(CW$ec2\fP\->unmonitor_instances(\-instance_id=>\e@instanceIds)" +.IX Subsection "@monitoring_state = $ec2->unmonitor_instances(-instance_id=>@instanceIds)" +This method disables monitoring for the listed instances and returns a +list of VM::EC2::Instance::MonitoringState objects. You can +later use these objects to activate and inactivate monitoring. +.ie n .SS "$meta = $ec2\->instance_metadata" +.el .SS "\f(CW$meta\fP = \f(CW$ec2\fP\->instance_metadata" +.IX Subsection "$meta = $ec2->instance_metadata" +\&\fBFor use on running \s-1EC2\s0 instances only:\fR This method returns a +VM::EC2::Instance::Metadata object that will return information about +the currently running instance using the \s-1HTTP://\s0 metadata fields +described at +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?instancedata\-data\-categories.html. This +is usually fastest way to get runtime information on the current +instance. +.ie n .SS "@data = $ec2\->describe_instance_attribute($instance_id,$attribute)" +.el .SS "\f(CW@data\fP = \f(CW$ec2\fP\->describe_instance_attribute($instance_id,$attribute)" +.IX Subsection "@data = $ec2->describe_instance_attribute($instance_id,$attribute)" +This method returns instance attributes. Only one attribute can be +retrieved at a time. The following is the list of attributes that can be +retrieved: +.PP +.Vb 10 +\& instanceType \-\- scalar +\& kernel \-\- scalar +\& ramdisk \-\- scalar +\& userData \-\- scalar +\& disableApiTermination \-\- scalar +\& instanceInitiatedShutdownBehavior \-\- scalar +\& rootDeviceName \-\- scalar +\& blockDeviceMapping \-\- list of hashref +\& sourceDestCheck \-\- scalar +\& groupSet \-\- list of scalar +.Ve +.PP +All of these values can be retrieved more conveniently from the +VM::EC2::Instance object returned from \fIdescribe_instances()\fR, so +there is no attempt to parse the results of this call into Perl +objects. Therefore, some of the attributes, in particular +\&'blockDeviceMapping' will be returned as raw hashrefs. +.ie n .SS "$boolean = $ec2\->modify_instance_attribute($instance_id,\-$attribute_name=>$value)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->modify_instance_attribute($instance_id,\-$attribute_name=>$value)" +.IX Subsection "$boolean = $ec2->modify_instance_attribute($instance_id,-$attribute_name=>$value)" +This method changes instance attributes. It can only be applied to stopped instances. +The following is the list of attributes that can be set: +.PP +.Vb 10 +\& \-instance_type \-\- type of instance, e.g. "m1.small" +\& \-kernel \-\- kernel id +\& \-ramdisk \-\- ramdisk id +\& \-user_data \-\- user data +\& \-termination_protection \-\- true to prevent termination from the console +\& \-disable_api_termination \-\- same as the above +\& \-shutdown_behavior \-\- "stop" or "terminate" +\& \-instance_initiated_shutdown_behavior \-\- same as above +\& \-root_device_name \-\- root device name +\& \-source_dest_check \-\- enable NAT (VPC only) +\& \-group_id \-\- VPC security group +\& \-block_devices \-\- Specify block devices to change +\& deleteOnTermination flag +\& \-block_device_mapping \-\- Alias for \-block_devices +.Ve +.PP +Only one attribute can be changed in a single request. For example: +.PP +.Vb 1 +\& $ec2\->modify_instance_attribute(\*(Aqi\-12345\*(Aq,\-kernel=>\*(Aqaki\-f70657b2\*(Aq); +.Ve +.PP +The result code is true if the attribute was successfully modified, +false otherwise. In the latter case, \f(CW$ec2\fR\->\fIerror()\fR will provide the +error message. +.PP +The ability to change the deleteOnTermination flag for attached block devices +is not documented in the official Amazon \s-1API\s0 documentation, but appears to work. +The syntax is: +.PP +# turn on deleteOnTermination + \f(CW$ec2\fR\->modify_instance_attribute(\-block_devices=>'/dev/sdf=v\-12345') +# turn off deleteOnTermination + \f(CW$ec2\fR\->modify_instance_attribute(\-block_devices=>'/dev/sdf=v\-12345') +.PP +The syntax is slightly different from what is used by \-block_devices +in \fIrun_instances()\fR, and is \*(L"device=volumeId:boolean\*(R". Multiple block +devices can be specified using an arrayref. +.ie n .SS "$boolean = $ec2\->reset_instance_attribute($instance_id,$attribute)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->reset_instance_attribute($instance_id,$attribute)" +.IX Subsection "$boolean = $ec2->reset_instance_attribute($instance_id,$attribute)" +This method resets an attribute of the given instance to its default +value. Valid attributes are \*(L"kernel\*(R", \*(L"ramdisk\*(R" and +\&\*(L"sourceDestCheck\*(R". The result code is true if the reset was +successful. +.SH "EC2 AMAZON MACHINE IMAGES" +.IX Header "EC2 AMAZON MACHINE IMAGES" +The methods in this section allow you to query and manipulate Amazon +machine images (AMIs). See VM::EC2::Image. +.ie n .SS "@i = $ec2\->describe_images(\-image_id=>\e@id,\-executable_by=>$id, \-owner=>$id, \-filter=>\e%filters)" +.el .SS "\f(CW@i\fP = \f(CW$ec2\fP\->describe_images(\-image_id=>\e@id,\-executable_by=>$id, \-owner=>$id, \-filter=>\e%filters)" +.IX Subsection "@i = $ec2->describe_images(-image_id=>@id,-executable_by=>$id, -owner=>$id, -filter=>%filters)" +.ie n .SS "@i = $ec2\->describe_images(@image_ids)" +.el .SS "\f(CW@i\fP = \f(CW$ec2\fP\->describe_images(@image_ids)" +.IX Subsection "@i = $ec2->describe_images(@image_ids)" +Return a series of VM::EC2::Image objects, each describing an +\&\s-1AMI\s0. Optional parameters: +.PP +.Vb 2 +\& \-image_id The id of the image, either a string scalar or an +\& arrayref. +\& +\& \-executable_by Filter by images executable by the indicated user account +\& +\& \-owner Filter by owner account +\& +\& \-filter Tags and other filters to apply +.Ve +.PP +If there are no other arguments, you may omit the \-filter argument +name and call \fIdescribe_images()\fR with a single hashref consisting of +the search filters you wish to apply. +.PP +The full list of image filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeImages.html +.ie n .SS "$image = $ec2\->create_image(%args)" +.el .SS "\f(CW$image\fP = \f(CW$ec2\fP\->create_image(%args)" +.IX Subsection "$image = $ec2->create_image(%args)" +Create an image from an EBS-backed instance and return a +VM::EC2::Image object. The instance must be in the \*(L"stopped\*(R" or +\&\*(L"running\*(R" state. In the latter case, Amazon will stop the instance, +create the image, and then restart it unless the \-no_reboot argument +is provided. +.PP +Arguments: +.PP +.Vb 4 +\& \-instance_id ID of the instance to create an image from. (required) +\& \-name Name for the image that will be created. (required) +\& \-description Description of the new image. +\& \-no_reboot If true, don\*(Aqt reboot the instance. +.Ve +.ie n .SS "$image = $ec2\->register_image(%args)" +.el .SS "\f(CW$image\fP = \f(CW$ec2\fP\->register_image(%args)" +.IX Subsection "$image = $ec2->register_image(%args)" +Register an image, creating an \s-1AMI\s0. This can be used to create an \s-1AMI\s0 +from a S3\-backed instance-store bundle, or to create an \s-1AMI\s0 from a +snapshot of an EBS-backed root volume. +.PP +Required arguments: +.PP +.Vb 1 +\& \-name Name for the image that will be created. +.Ve +.PP +Arguments required for an EBS-backed image: +.PP +.Vb 7 +\& \-root_device_name The root device name, e.g. /dev/sda1 +\& \-block_device_mapping The block device mapping strings, including the +\& snapshot ID for the root volume. This can +\& be either a scalar string or an arrayref. +\& See run_instances() for a description of the +\& syntax. +\& \-block_devices Alias of the above. +.Ve +.PP +Arguments required for an instance-store image: +.PP +.Vb 1 +\& \-image_location Full path to the AMI manifest in Amazon S3 storage. +.Ve +.PP +Common optional arguments: +.PP +.Vb 4 +\& \-description Description of the AMI +\& \-architecture Architecture of the image ("i386" or "x86_64") +\& \-kernel_id ID fo the kernel to use +\& \-ramdisk_id ID of the RAM disk to use +.Ve +.PP +While you do not have to specify the kernel \s-1ID\s0, it is strongly +recommended that you do so. Otherwise the kernel will have to be +specified for \fIrun_instances()\fR. +.PP +Note: Immediately after registering the image you can add tags to it +and use modify_image_attribute to change launch permissions, etc. +.ie n .SS "$result = $ec2\->deregister_image($image_id)" +.el .SS "\f(CW$result\fP = \f(CW$ec2\fP\->deregister_image($image_id)" +.IX Subsection "$result = $ec2->deregister_image($image_id)" +Deletes the registered image and returns true if successful. +.ie n .SS "@data = $ec2\->describe_image_attribute($image_id,$attribute)" +.el .SS "\f(CW@data\fP = \f(CW$ec2\fP\->describe_image_attribute($image_id,$attribute)" +.IX Subsection "@data = $ec2->describe_image_attribute($image_id,$attribute)" +This method returns image attributes. Only one attribute can be +retrieved at a time. The following is the list of attributes that can be +retrieved: +.PP +.Vb 6 +\& description \-\- scalar +\& kernel \-\- scalar +\& ramdisk \-\- scalar +\& launchPermission \-\- list of scalar +\& productCodes \-\- array +\& blockDeviceMapping \-\- list of hashref +.Ve +.PP +All of these values can be retrieved more conveniently from the +VM::EC2::Image object returned from \fIdescribe_images()\fR, so there is +no attempt to parse the results of this call into Perl objects. In +particular, 'blockDeviceMapping' is returned as a raw hashrefs (there +also seems to be an \s-1AWS\s0 bug that causes fetching this attribute to return an +AuthFailure error). +.PP +Please see the VM::EC2::Image \fIlaunchPermissions()\fR and +\&\fIblockDeviceMapping()\fR methods for more convenient ways to get this +data. +.ie n .SS "$boolean = $ec2\->modify_image_attribute($image_id,\-$attribute_name=>$value)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->modify_image_attribute($image_id,\-$attribute_name=>$value)" +.IX Subsection "$boolean = $ec2->modify_image_attribute($image_id,-$attribute_name=>$value)" +This method changes image attributes. The first argument is the image +\&\s-1ID\s0, and this is followed by the attribute name and the value to change +it to. +.PP +The following is the list of attributes that can be set: +.PP +.Vb 7 +\& \-launch_add_user \-\- scalar or arrayref of UserIds to grant launch permissions to +\& \-launch_add_group \-\- scalar or arrayref of Groups to remove launch permissions from +\& (only currently valid value is "all") +\& \-launch_remove_user \-\- scalar or arrayref of UserIds to remove from launch permissions +\& \-launch_remove_group \-\- scalar or arrayref of Groups to remove from launch permissions +\& \-product_code \-\- scalar or array of product codes to add +\& \-description \-\- scalar new description +.Ve +.PP +You can abbreviate the launch permission arguments to \-add_user, +\&\-add_group, \-remove_user, \-remove_group, etc. +.PP +Only one attribute can be changed in a single request. +.PP +For example: +.PP +.Vb 1 +\& $ec2\->modify_image_attribute(\*(Aqi\-12345\*(Aq,\-product_code=>[\*(Aqabcde\*(Aq,\*(Aqghijk\*(Aq]); +.Ve +.PP +The result code is true if the attribute was successfully modified, +false otherwise. In the latter case, \f(CW$ec2\fR\->\fIerror()\fR will provide the +error message. +.PP +To make an image public, specify \-launch_add_group=>'all': +.PP +.Vb 1 +\& $ec2\->modify_image_attribute(\*(Aqi\-12345\*(Aq,\-launch_add_group=>\*(Aqall\*(Aq); +.Ve +.PP +Also see VM::EC2::Image for shortcut methods. For example: +.PP +.Vb 1 +\& $image\->add_authorized_users(1234567,999991); +.Ve +.ie n .SS "$boolean = $ec2\->reset_image_attribute($image_id,$attribute_name)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->reset_image_attribute($image_id,$attribute_name)" +.IX Subsection "$boolean = $ec2->reset_image_attribute($image_id,$attribute_name)" +This method resets an attribute of the given snapshot to its default +value. The valid attributes are: +.PP +.Vb 1 +\& launchPermission +.Ve +.SH "EC2 VOLUMES AND SNAPSHOTS" +.IX Header "EC2 VOLUMES AND SNAPSHOTS" +The methods in this section allow you to query and manipulate \s-1EC2\s0 \s-1EBS\s0 +volumes and snapshots. See VM::EC2::Volume and VM::EC2::Snapshot +for additional functionality provided through the object interface. +.ie n .SS "@v = $ec2\->describe_volumes(\-volume_id=>\e@ids,\-filter=>\e%filters)" +.el .SS "\f(CW@v\fP = \f(CW$ec2\fP\->describe_volumes(\-volume_id=>\e@ids,\-filter=>\e%filters)" +.IX Subsection "@v = $ec2->describe_volumes(-volume_id=>@ids,-filter=>%filters)" +.ie n .SS "@v = $ec2\->describe_volumes(@volume_ids)" +.el .SS "\f(CW@v\fP = \f(CW$ec2\fP\->describe_volumes(@volume_ids)" +.IX Subsection "@v = $ec2->describe_volumes(@volume_ids)" +Return a series of VM::EC2::Volume objects. Optional parameters: +.PP +.Vb 2 +\& \-volume_id The id of the volume to fetch, either a string +\& scalar or an arrayref. +\& +\& \-filter One or more filters to apply to the search +.Ve +.PP +The \-filter argument name can be omitted if there are no other +arguments you wish to pass. +.PP +The full list of volume filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeVolumes.html +.ie n .SS "$v = $ec2\->create_volume(\-availability_zone=>$zone,\-snapshot_id=>$snapshotId,\-size=>$size)" +.el .SS "\f(CW$v\fP = \f(CW$ec2\fP\->create_volume(\-availability_zone=>$zone,\-snapshot_id=>$snapshotId,\-size=>$size)" +.IX Subsection "$v = $ec2->create_volume(-availability_zone=>$zone,-snapshot_id=>$snapshotId,-size=>$size)" +Create a volume in the specified availability zone and return +information about it. +.PP +Arguments: +.PP +.Vb 2 +\& \-availability_zone \-\- An availability zone from +\& describe_availability_zones (required) +\& +\& \-snapshot_id \-\- ID of a snapshot to use to build volume from. +\& +\& \-size \-\- Size of the volume, in GB (between 1 and 1024). +.Ve +.PP +One or both of \-snapshot_id or \-size are required. For convenience, +you may abbreviate \-availability_zone as \-zone, and \-snapshot_id as +\&\-snapshot. +.PP +The returned object is a VM::EC2::Volume object. +.ie n .SS "$result = $ec2\->delete_volume($volume_id);" +.el .SS "\f(CW$result\fP = \f(CW$ec2\fP\->delete_volume($volume_id);" +.IX Subsection "$result = $ec2->delete_volume($volume_id);" +Deletes the specified volume. Returns a boolean indicating success of +the delete operation. Note that a volume will remain in the \*(L"deleting\*(R" +state for some time after this call completes. +.ie n .SS "$attachment = $ec2\->attach_volume($volume_id,$instance_id,$device);" +.el .SS "\f(CW$attachment\fP = \f(CW$ec2\fP\->attach_volume($volume_id,$instance_id,$device);" +.IX Subsection "$attachment = $ec2->attach_volume($volume_id,$instance_id,$device);" +.ie n .SS "$attachment = $ec2\->attach_volume(\-volume_id=>$volume_id,\-instance_id=>$instance_id,\-device=>$device);" +.el .SS "\f(CW$attachment\fP = \f(CW$ec2\fP\->attach_volume(\-volume_id=>$volume_id,\-instance_id=>$instance_id,\-device=>$device);" +.IX Subsection "$attachment = $ec2->attach_volume(-volume_id=>$volume_id,-instance_id=>$instance_id,-device=>$device);" +Attaches the specified volume to the instance using the indicated +device. All arguments are required: +.PP +.Vb 6 +\& \-volume_id \-\- ID of the volume to attach. The volume must be in +\& "available" state. +\& \-instance_id \-\- ID of the instance to attach to. Both instance and +\& attachment must be in the same availability zone. +\& \-device \-\- How the device is exposed to the instance, e.g. +\& \*(Aq/dev/sdg\*(Aq. +.Ve +.PP +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling \fIcurrent_status()\fR: +.PP +.Vb 5 +\& my $a = $ec2\->attach_volume(\*(Aqvol\-12345\*(Aq,\*(Aqi\-12345\*(Aq,\*(Aq/dev/sdg\*(Aq); +\& while ($a\->current_status ne \*(Aqattached\*(Aq) { +\& sleep 2; +\& } +\& print "volume is ready to go\en"; +.Ve +.PP +or more simply +.PP +.Vb 2 +\& my $a = $ec2\->attach_volume(\*(Aqvol\-12345\*(Aq,\*(Aqi\-12345\*(Aq,\*(Aq/dev/sdg\*(Aq); +\& $ec2\->wait_for_attachments($a); +.Ve +.ie n .SS "$attachment = $ec2\->detach_volume($volume_id)" +.el .SS "\f(CW$attachment\fP = \f(CW$ec2\fP\->detach_volume($volume_id)" +.IX Subsection "$attachment = $ec2->detach_volume($volume_id)" +.ie n .SS "$attachment = $ec2\->detach_volume(\-volume_id=>$volume_id,\-instance_id=>$instance_id, \-device=>$device, \-force=>$force);" +.el .SS "\f(CW$attachment\fP = \f(CW$ec2\fP\->detach_volume(\-volume_id=>$volume_id,\-instance_id=>$instance_id, \-device=>$device, \-force=>$force);" +.IX Subsection "$attachment = $ec2->detach_volume(-volume_id=>$volume_id,-instance_id=>$instance_id, -device=>$device, -force=>$force);" +Detaches the specified volume from an instance. +.PP +.Vb 5 +\& \-volume_id \-\- ID of the volume to detach. (required) +\& \-instance_id \-\- ID of the instance to detach from. (optional) +\& \-device \-\- How the device is exposed to the instance. (optional) +\& \-force \-\- Force detachment, even if previous attempts were +\& unsuccessful. (optional) +.Ve +.PP +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling \fIcurrent_status()\fR: +.PP +.Vb 5 +\& my $a = $ec2\->detach_volume(\*(Aqvol\-12345\*(Aq); +\& while ($a\->current_status ne \*(Aqdetached\*(Aq) { +\& sleep 2; +\& } +\& print "volume is ready to go\en"; +.Ve +.PP +Or more simply: +.PP +.Vb 3 +\& my $a = $ec2\->detach_volume(\*(Aqvol\-12345\*(Aq); +\& $ec2\->wait_for_attachments($a); +\& print "volume is ready to go\en" if $a\->current_status eq \*(Aqdetached\*(Aq; +.Ve +.ie n .SS "@snaps = $ec2\->describe_snapshots(\-snapshot_id=>\e@ids,%other_param)" +.el .SS "\f(CW@snaps\fP = \f(CW$ec2\fP\->describe_snapshots(\-snapshot_id=>\e@ids,%other_param)" +.IX Subsection "@snaps = $ec2->describe_snapshots(-snapshot_id=>@ids,%other_param)" +.ie n .SS "@snaps = $ec2\->describe_snapshots(@snapshot_ids)" +.el .SS "\f(CW@snaps\fP = \f(CW$ec2\fP\->describe_snapshots(@snapshot_ids)" +.IX Subsection "@snaps = $ec2->describe_snapshots(@snapshot_ids)" +Returns a series of VM::EC2::Snapshot objects. All parameters +are optional: +.PP +.Vb 1 +\& \-snapshot_id ID of the snapshot +\& +\& \-owner Filter by owner ID +\& +\& \-restorable_by Filter by IDs of a user who is allowed to restore +\& the snapshot +\& +\& \-filter Tags and other filters +.Ve +.PP +The \-filter argument name can be omitted if there are no other +arguments you wish to pass. +.PP +The full list of applicable filters can be found at +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeSnapshots.html +.ie n .SS "@data = $ec2\->describe_snapshot_attribute($snapshot_id,$attribute)" +.el .SS "\f(CW@data\fP = \f(CW$ec2\fP\->describe_snapshot_attribute($snapshot_id,$attribute)" +.IX Subsection "@data = $ec2->describe_snapshot_attribute($snapshot_id,$attribute)" +This method returns snapshot attributes. The first argument is the +snapshot \s-1ID\s0, and the second is the name of the attribute to +fetch. Currently Amazon defines only one attribute, +\&\*(L"createVolumePermission\*(R", which will return a list of user Ids who are +allowed to create volumes from this snapshot. +.PP +The result is a raw hash of attribute values. Please see +VM::EC2::Snapshot for a more convenient way of accessing and +modifying snapshot attributes. +.ie n .SS "$boolean = $ec2\->modify_snapshot_attribute($snapshot_id,\-$argument=>$value)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->modify_snapshot_attribute($snapshot_id,\-$argument=>$value)" +.IX Subsection "$boolean = $ec2->modify_snapshot_attribute($snapshot_id,-$argument=>$value)" +This method changes snapshot attributes. The first argument is the +snapshot \s-1ID\s0, and this is followed by an attribute modification command +and the value to change it to. +.PP +Currently the only attribute that can be changed is the +createVolumeAttribute. This is done through the following arguments +.PP +.Vb 5 +\& \-createvol_add_user \-\- scalar or arrayref of UserIds to grant create volume permissions to +\& \-createvol_add_group \-\- scalar or arrayref of Groups to remove create volume permissions from +\& (only currently valid value is "all") +\& \-createvol_remove_user \-\- scalar or arrayref of UserIds to remove from create volume permissions +\& \-createvol_remove_group \-\- scalar or arrayref of Groups to remove from create volume permissions +.Ve +.PP +You can abbreviate these to \-add_user, \-add_group, \-remove_user, \-remove_group, etc. +.PP +See VM::EC2::Snapshot for more convenient methods for interrogating +and modifying the create volume permissions. +.ie n .SS "$boolean = $ec2\->reset_snapshot_attribute($snapshot_id,$attribute)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->reset_snapshot_attribute($snapshot_id,$attribute)" +.IX Subsection "$boolean = $ec2->reset_snapshot_attribute($snapshot_id,$attribute)" +This method resets an attribute of the given snapshot to its default +value. The only valid attribute at this time is +\&\*(L"createVolumePermission.\*(R" +.ie n .SS "$snapshot = $ec2\->create_snapshot($volume_id)" +.el .SS "\f(CW$snapshot\fP = \f(CW$ec2\fP\->create_snapshot($volume_id)" +.IX Subsection "$snapshot = $ec2->create_snapshot($volume_id)" +.ie n .SS "$snapshot = $ec2\->create_snapshot(\-volume_id=>$vol,\-description=>$desc)" +.el .SS "\f(CW$snapshot\fP = \f(CW$ec2\fP\->create_snapshot(\-volume_id=>$vol,\-description=>$desc)" +.IX Subsection "$snapshot = $ec2->create_snapshot(-volume_id=>$vol,-description=>$desc)" +Snapshot the \s-1EBS\s0 volume and store it to S3 storage. To ensure a +consistent snapshot, the volume should be unmounted prior to +initiating this operation. +.PP +Arguments: +.PP +.Vb 2 +\& \-volume_id \-\- ID of the volume to snapshot (required) +\& \-description \-\- A description to add to the snapshot (optional) +.Ve +.PP +The return value is a VM::EC2::Snapshot object that can be queried +through its \fIcurrent_status()\fR interface to follow the progress of the +snapshot operation. +.PP +Another way to accomplish the same thing is through the +VM::EC2::Volume interface: +.PP +.Vb 6 +\& my $volume = $ec2\->describe_volumes(\-filter=>{\*(Aqtag:Name\*(Aq=>\*(AqAccountingData\*(Aq}); +\& $s = $volume\->create_snapshot("Backed up at ".localtime); +\& while ($s\->current_status eq \*(Aqpending\*(Aq) { +\& print "Progress: ",$s\->progress,"% done\en"; +\& } +\& print "Snapshot status: ",$s\->current_status,"\en"; +.Ve +.ie n .SS "$boolean = $ec2\->delete_snapshot($snapshot_id)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->delete_snapshot($snapshot_id)" +.IX Subsection "$boolean = $ec2->delete_snapshot($snapshot_id)" +Delete the indicated snapshot and return true if the request was +successful. +.SH "SECURITY GROUPS AND KEY PAIRS" +.IX Header "SECURITY GROUPS AND KEY PAIRS" +The methods in this section allow you to query and manipulate security +groups (firewall rules) and \s-1SSH\s0 key pairs. See +VM::EC2::SecurityGroup and VM::EC2::KeyPair for functionality +that is available through these objects. +.ie n .SS "@sg = $ec2\->describe_security_groups(\-group_id => \e@ids, \-group_name=> \e@names, \-filter => \e%filters);" +.el .SS "\f(CW@sg\fP = \f(CW$ec2\fP\->describe_security_groups(\-group_id => \e@ids, \-group_name=> \e@names, \-filter => \e%filters);" +.IX Subsection "@sg = $ec2->describe_security_groups(-group_id => @ids, -group_name=> @names, -filter => %filters);" +.ie n .SS "@sg = $ec2\->describe_security_groups(@group_ids)" +.el .SS "\f(CW@sg\fP = \f(CW$ec2\fP\->describe_security_groups(@group_ids)" +.IX Subsection "@sg = $ec2->describe_security_groups(@group_ids)" +Searches for security groups (firewall rules) matching the provided +filters and return a series of VM::EC2::SecurityGroup objects. +.PP +Optional parameters: +.PP +.Vb 2 +\& \-group_name A single group name or an arrayref containing a list +\& of names +\& +\& \-name Shorter version of \-group_name +\& +\& \-group_id A single group id (i.e. \*(Aqsg\-12345\*(Aq) or an arrayref +\& containing a list of ids +\& +\& \-filter Filter on tags and other attributes. +.Ve +.PP +The \-filter argument name can be omitted if there are no other +arguments you wish to pass. +.PP +The full list of security group filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeSecurityGroups.html +.ie n .SS "$group = $ec2\->create_security_group(\-group_name=>$name, \-group_description=>$description, \-vpc_id => $vpc_id )" +.el .SS "\f(CW$group\fP = \f(CW$ec2\fP\->create_security_group(\-group_name=>$name, \-group_description=>$description, \-vpc_id => \f(CW$vpc_id\fP )" +.IX Subsection "$group = $ec2->create_security_group(-group_name=>$name, -group_description=>$description, -vpc_id => $vpc_id )" +Create a security group. Arguments are: +.PP +.Vb 4 +\& \-group_name Name of the security group (required) +\& \-group_description Description of the security group (required) +\& \-vpc_id Virtual private cloud security group ID +\& (required for VPC security groups) +.Ve +.PP +For convenience, you may use \-name and \-description as aliases for +\&\-group_name and \-group_description respectively. +.PP +If succcessful, the method returns an object of type +VM::EC2::SecurityGroup. +.ie n .SS "$boolean = $ec2\->delete_security_group($group_id)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->delete_security_group($group_id)" +.IX Subsection "$boolean = $ec2->delete_security_group($group_id)" +.ie n .SS "$boolean = $ec2\->delete_security_group(\-group_id=>$group_id, \-group_name=>$name);" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->delete_security_group(\-group_id=>$group_id, \-group_name=>$name);" +.IX Subsection "$boolean = $ec2->delete_security_group(-group_id=>$group_id, -group_name=>$name);" +Delete a security group. Arguments are: +.PP +.Vb 2 +\& \-group_name Name of the security group +\& \-group_id ID of the security group +.Ve +.PP +Either \-group_name or \-group_id is required. In the single-argument +form, the method deletes the security group given by its id. +.PP +If succcessful, the method returns true. +.ie n .SS "$boolean = $ec2\->update_security_group($security_group)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->update_security_group($security_group)" +.IX Subsection "$boolean = $ec2->update_security_group($security_group)" +Add one or more incoming firewall rules to a security group. The rules +to add are stored in a VM::EC2::SecurityGroup which is created +either by \fIdescribe_security_groups()\fR or \fIcreate_security_group()\fR. This method combines +the actions AuthorizeSecurityGroupIngress, +AuthorizeSecurityGroupEgress, RevokeSecurityGroupIngress, and +RevokeSecurityGroupEgress. +.PP +For details, see VM::EC2::SecurityGroup. Here is a brief summary: +.PP +.Vb 1 +\& $sg = $ec2\->create_security_group(\-name=>\*(AqMyGroup\*(Aq,\-description=>\*(AqExample group\*(Aq); +\& +\& # TCP on port 80 for the indicated address ranges +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => 80, +\& \-source_ip => [\*(Aq192.168.2.0/24\*(Aq,\*(Aq192.168.2.1/24\*(Aq}); +\& +\& # TCP on ports 22 and 23 from anyone +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => \*(Aq22..23\*(Aq, +\& \-source_ip => \*(Aq0.0.0.0/0\*(Aq); +\& +\& # ICMP on echo (ping) port from anyone +\& $sg\->authorize_incoming(\-protocol => \*(Aqicmp\*(Aq, +\& \-port => 0, +\& \-source_ip => \*(Aq0.0.0.0/0\*(Aq); +\& +\& # TCP to port 25 (mail) from instances belonging to +\& # the "Mail relay" group belonging to user 12345678. +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => 25, +\& \-group => \*(Aq12345678/Mail relay\*(Aq); +\& +\& $result = $ec2\->update_security_group($sg); +.Ve +.PP +or more simply: +.PP +.Vb 1 +\& $result = $sg\->update(); +.Ve +.ie n .SS "$account_id = $ec2\->account_id" +.el .SS "\f(CW$account_id\fP = \f(CW$ec2\fP\->account_id" +.IX Subsection "$account_id = $ec2->account_id" +Looks up the account \s-1ID\s0 corresponding to the credentials provided when +the \s-1VM::EC2\s0 instance was created. The way this is done is to fetch the +\&\*(L"default\*(R" security group, which is guaranteed to exist, and then +return its groupId field. The result is cached so that subsequent +accesses are fast. +.ie n .SS "$account_id = $ec2\->userId" +.el .SS "\f(CW$account_id\fP = \f(CW$ec2\fP\->userId" +.IX Subsection "$account_id = $ec2->userId" +Same as above, for convenience. +.ie n .SS "@keys = $ec2\->describe_key_pairs(\-key_name => \e@names, \-filter => \e%filters); =head2 @keys = $ec2\->describe_key_pairs(@names);" +.el .SS "\f(CW@keys\fP = \f(CW$ec2\fP\->describe_key_pairs(\-key_name => \e@names, \-filter => \e%filters); =head2 \f(CW@keys\fP = \f(CW$ec2\fP\->describe_key_pairs(@names);" +.IX Subsection "@keys = $ec2->describe_key_pairs(-key_name => @names, -filter => %filters); =head2 @keys = $ec2->describe_key_pairs(@names);" +Searches for ssh key pairs matching the provided filters and return +a series of VM::EC2::KeyPair objects. +.PP +Optional parameters: +.PP +.Vb 3 +\& \-key_name A single key name or an arrayref containing a list +\& of names +\& \-filter Filter on tags and other attributes. +.Ve +.PP +The full list of key filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeKeyPairs.html +.ie n .SS "$key = $ec2\->create_key_pair($name)" +.el .SS "\f(CW$key\fP = \f(CW$ec2\fP\->create_key_pair($name)" +.IX Subsection "$key = $ec2->create_key_pair($name)" +Create a new key pair with the specified name (required). If the key +pair already exists, returns undef. The contents of the new keypair, +including the PEM-encoded private key, is contained in the returned +VM::EC2::KeyPair object: +.PP +.Vb 5 +\& my $key = $ec2\->create_key_pair(\*(AqMy Keypair\*(Aq); +\& if ($key) { +\& print $key\->fingerprint,"\en"; +\& print $key\->privateKey,"\en"; +\& } +.Ve +.ie n .SS "$key = $ec2\->import_key_pair(\-key_name=>$name, \-public_key_material=>$public_key)" +.el .SS "\f(CW$key\fP = \f(CW$ec2\fP\->import_key_pair(\-key_name=>$name, \-public_key_material=>$public_key)" +.IX Subsection "$key = $ec2->import_key_pair(-key_name=>$name, -public_key_material=>$public_key)" +.ie n .SS "$key = $ec2\->import_key_pair($name,$public_key)" +.el .SS "\f(CW$key\fP = \f(CW$ec2\fP\->import_key_pair($name,$public_key)" +.IX Subsection "$key = $ec2->import_key_pair($name,$public_key)" +Imports a preexisting public key into \s-1AWS\s0 under the specified name. +If successful, returns a VM::EC2::KeyPair. The public key must be an +\&\s-1RSA\s0 key of length 1024, 2048 or 4096. The method can be called with +two unnamed arguments consisting of the key name and the public key +material, or in a named argument form with the following argument +names: +.PP +.Vb 2 +\& \-key_name \-\- desired name for the imported key pair (required) +\& \-name \-\- shorter version of \-key_name +\& +\& \-public_key_material \-\- public key data (required) +\& \-public_key \-\- shorter version of the above +.Ve +.PP +This example uses Net::SSH::Perl::Key to generate a new keypair, and +then uploads the public key to Amazon. +.PP +.Vb 1 +\& use Net::SSH::Perl::Key; +\& +\& my $newkey = Net::SSH::Perl::Key\->keygen(\*(AqRSA\*(Aq,1024); +\& $newkey\->write_private(\*(Aq.ssh/MyKeypair.rsa\*(Aq); # save private parts +\& +\& my $key = $ec2\->import_key_pair(\*(AqMy Keypair\*(Aq => $newkey\->dump_public) +\& or die $ec2\->error; +\& print "My Keypair added with fingerprint ",$key\->fingerprint,"\en"; +.Ve +.PP +Several different formats are accepted for the key, including \s-1SSH\s0 +\&\*(L"authorized_keys\*(R" format (generated by ssh-keygen and +Net::SSH::Perl::Key), the \s-1SSH\s0 public keys format, and \s-1DER\s0 format. You +do not need to base64\-encode the key or perform any other +pre-processing. +.PP +Note that the algorithm used by Amazon to calculate its key +fingerprints differs from the one used by the ssh library, so don't +try to compare the key fingerprints returned by Amazon to the ones +produced by ssh-keygen or Net::SSH::Perl::Key. +.ie n .SS "$result = $ec2\->delete_key_pair($name)" +.el .SS "\f(CW$result\fP = \f(CW$ec2\fP\->delete_key_pair($name)" +.IX Subsection "$result = $ec2->delete_key_pair($name)" +Deletes the key pair with the specified name (required). Returns true +if successful. +.SH "TAGS" +.IX Header "TAGS" +These methods allow you to create, delete and fetch resource tags. You +may find that you rarely need to use these methods directly because +every object produced by \s-1VM::EC2\s0 supports a simple tag interface: +.PP +.Vb 5 +\& $object = $ec2\->describe_volumes(\-volume_id=>\*(Aqvol\-12345\*(Aq); # e.g. +\& $tags = $object\->tags(); +\& $name = $tags\->{Name}; +\& $object\->add_tags(Role => \*(AqWeb Server\*(Aq, Status=>\*(Aqdevelopment); +\& $object\->delete_tags(Name=>undef); +.Ve +.PP +See VM::EC2::Generic for a full description of the uniform object +tagging interface. +.PP +These methods are most useful when creating and deleting tags for +multiple resources simultaneously. +.ie n .SS "@t = $ec2\->describe_tags(\-filter=>\e%filters);" +.el .SS "\f(CW@t\fP = \f(CW$ec2\fP\->describe_tags(\-filter=>\e%filters);" +.IX Subsection "@t = $ec2->describe_tags(-filter=>%filters);" +Return a series of VM::EC2::Tag objects, each describing an +\&\s-1AMI\s0. A single optional \-filter argument is allowed. +.PP +Available filters are: key, resource-id, resource-type and value. See +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeTags.html +.ie n .SS "$bool = $ec2\->create_tags(\-resource_id=>\e@ids,\-tag=>{key1=>value1...})" +.el .SS "\f(CW$bool\fP = \f(CW$ec2\fP\->create_tags(\-resource_id=>\e@ids,\-tag=>{key1=>value1...})" +.IX Subsection "$bool = $ec2->create_tags(-resource_id=>@ids,-tag=>{key1=>value1...})" +Tags the resource indicated by \-resource_id with the tag(s) in in the +hashref indicated by \-tag. You may specify a single resource by +passing a scalar resourceId to \-resource_id, or multiple resources +using an anonymous array. Returns a true value if tagging was +successful. +.PP +The method name \*(L"\fIadd_tags()\fR\*(R" is an alias for \fIcreate_tags()\fR. +.PP +You may find it more convenient to tag an object retrieved with any of +the \fIdescribe()\fR methods using the built-in \fIadd_tags()\fR method: +.PP +.Vb 2 +\& @snap = $ec2\->describe_snapshots(\-filter=>{status=>\*(Aqcompleted\*(Aq}); +\& foreach (@snap) {$_\->add_tags(ReadyToUse => \*(Aqtrue\*(Aq)} +.Ve +.PP +but if there are many snapshots to tag simultaneously, this will be faster: +.PP +.Vb 2 +\& @snap = $ec2\->describe_snapshots(\-filter=>{status=>\*(Aqcompleted\*(Aq}); +\& $ec2\->add_tags(\-resource_id=>\e@snap,\-tag=>{ReadyToUse=>\*(Aqtrue\*(Aq}); +.Ve +.PP +Note that you can tag volumes, snapshots and images owned by other +people. Only you will be able to see these tags. +.ie n .SS "$bool = $ec2\->delete_tags(\-resource_id=>$id1,\-tag=>{key1=>value1...})" +.el .SS "\f(CW$bool\fP = \f(CW$ec2\fP\->delete_tags(\-resource_id=>$id1,\-tag=>{key1=>value1...})" +.IX Subsection "$bool = $ec2->delete_tags(-resource_id=>$id1,-tag=>{key1=>value1...})" +Delete the indicated tags from the indicated resource. Pass an +arrayref to operate on several resources at once. The tag syntax is a +bit tricky. Use a value of undef to delete the tag unconditionally: +.PP +.Vb 1 +\& \-tag => { Role => undef } # deletes any Role tag +.Ve +.PP +Any scalar value will cause the tag to be deleted only if its value +exactly matches the specified value: +.PP +.Vb 2 +\& \-tag => { Role => \*(AqServer\*(Aq } # only delete the Role tag +\& # if it currently has the value "Server" +.Ve +.PP +An empty string value ('') will only delete the tag if its value is an +empty string, which is probably not what you want. +.PP +Pass an array reference of tag names to delete each of the tag names +unconditionally (same as passing a value of undef): +.PP +.Vb 1 +\& $ec2\->delete_tags([\*(AqName\*(Aq,\*(AqRole\*(Aq,\*(AqDescription\*(Aq]); +.Ve +.PP +You may find it more convenient to delete tags from objects using +their \fIdelete_tags()\fR method: +.PP +.Vb 2 +\& @snap = $ec2\->describe_snapshots(\-filter=>{status=>\*(Aqcompleted\*(Aq}); +\& foreach (@snap) {$_\->delete_tags(Role => undef)} +.Ve +.SH "ELASTIC IP ADDRESSES" +.IX Header "ELASTIC IP ADDRESSES" +The methods in this section allow you to allocate elastic \s-1IP\s0 +addresses, attach them to instances, and delete them. See +VM::EC2::ElasticAddress. +.ie n .SS "@addr = $ec2\->describe_addresses(\-public_ip=>\e@addr,\-allocation_id=>\e@id,\-filter\->\e%filters)" +.el .SS "\f(CW@addr\fP = \f(CW$ec2\fP\->describe_addresses(\-public_ip=>\e@addr,\-allocation_id=>\e@id,\-filter\->\e%filters)" +.IX Subsection "@addr = $ec2->describe_addresses(-public_ip=>@addr,-allocation_id=>@id,-filter->%filters)" +.ie n .SS "@addr = $ec2\->describe_addresses(@public_ips)" +.el .SS "\f(CW@addr\fP = \f(CW$ec2\fP\->describe_addresses(@public_ips)" +.IX Subsection "@addr = $ec2->describe_addresses(@public_ips)" +Queries \s-1AWS\s0 for a list of elastic \s-1IP\s0 addresses already allocated to +you. All parameters are optional: +.PP +.Vb 6 +\& \-public_ip \-\- An IP address (in dotted format) or an arrayref of +\& addresses to return information about. +\& \-allocation_id \-\- An allocation ID or arrayref of such IDs. Only +\& applicable to VPC addresses. +\& \-filter \-\- A hashref of tag=>value pairs to filter the response +\& on. +.Ve +.PP +The list of applicable filters can be found at +http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeAddresses.html. +.PP +This method returns a list of VM::EC2::ElasticAddress. +.ie n .SS "$address_info = $ec2\->allocate_address([\-vpc=>1])" +.el .SS "\f(CW$address_info\fP = \f(CW$ec2\fP\->allocate_address([\-vpc=>1])" +.IX Subsection "$address_info = $ec2->allocate_address([-vpc=>1])" +Request an elastic \s-1IP\s0 address. Pass \-vpc=>1 to allocate a \s-1VPC\s0 elastic +address. The return object is a VM::EC2::ElasticAddress. +.ie n .SS "$boolean = $ec2\->release_address($addr)" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->release_address($addr)" +.IX Subsection "$boolean = $ec2->release_address($addr)" +Release an elastic \s-1IP\s0 address. For non-VPC addresses, you may provide +either an \s-1IP\s0 address string, or a VM::EC2::ElasticAddress. For \s-1VPC\s0 +addresses, you must obtain a VM::EC2::ElasticAddress first +(e.g. with describe_addresses) and then pass that to the method. +.ie n .SS "$result = $ec2\->associate_address($elastic_addr => $instance_id)" +.el .SS "\f(CW$result\fP = \f(CW$ec2\fP\->associate_address($elastic_addr => \f(CW$instance_id\fP)" +.IX Subsection "$result = $ec2->associate_address($elastic_addr => $instance_id)" +Associate an elastic address with an instance id. Both arguments are +mandatory. If you are associating a \s-1VPC\s0 elastic \s-1IP\s0 address with the +instance, the result code will indicate the associationId. Otherwise +it will be a simple perl truth value (\*(L"1\*(R") if successful, undef if +false. +.PP +If this is an ordinary \s-1EC2\s0 Elastic \s-1IP\s0 address, the first argument may +either be an ordinary string (xx.xx.xx.xx format) or a +VM::EC2::ElasticAddress object. However, if it is a \s-1VPC\s0 elastic +\&\s-1IP\s0 address, then the argument must be a VM::EC2::ElasticAddress +as returned by \fIdescribe_addresses()\fR. The reason for this is that the +allocationId must be retrieved from the object in order to use in the +call. +.ie n .SS "$bool = $ec2\->disassociate_address($elastic_addr)" +.el .SS "\f(CW$bool\fP = \f(CW$ec2\fP\->disassociate_address($elastic_addr)" +.IX Subsection "$bool = $ec2->disassociate_address($elastic_addr)" +Disassociate an elastic address from whatever instance it is currently +associated with, if any. The result will be true if disassociation was +successful. +.PP +If this is an ordinary \s-1EC2\s0 Elastic \s-1IP\s0 address, the argument may +either be an ordinary string (xx.xx.xx.xx format) or a +VM::EC2::ElasticAddress object. However, if it is a \s-1VPC\s0 elastic +\&\s-1IP\s0 address, then the argument must be a VM::EC2::ElasticAddress +as returned by \fIdescribe_addresses()\fR. The reason for this is that the +allocationId must be retrieved from the object in order to use in the +call. +.SH "RESERVED INSTANCES" +.IX Header "RESERVED INSTANCES" +These methods apply to describing, purchasing and using Reserved Instances. +.ie n .SS "@offerings = $ec2\->describe_reserved_instances_offerings(@offering_ids)" +.el .SS "\f(CW@offerings\fP = \f(CW$ec2\fP\->describe_reserved_instances_offerings(@offering_ids)" +.IX Subsection "@offerings = $ec2->describe_reserved_instances_offerings(@offering_ids)" +.ie n .SS "@offerings = $ec2\->describe_reserved_instances_offerings(%args)" +.el .SS "\f(CW@offerings\fP = \f(CW$ec2\fP\->describe_reserved_instances_offerings(%args)" +.IX Subsection "@offerings = $ec2->describe_reserved_instances_offerings(%args)" +This method returns a list of the reserved instance offerings +currently available for purchase. The arguments allow you to filter +the offerings according to a variety of filters. +.PP +All arguments are optional. If no named arguments are used, then the +arguments are treated as Reserved Instance Offering IDs. +.PP +.Vb 2 +\& \-reserved_instances_offering_id A scalar or arrayref of reserved +\& instance offering IDs +\& +\& \-instance_type The instance type on which the +\& reserved instance can be used, +\& e.g. "c1.medium" +\& +\& \-availability_zone, \-zone The availability zone in which the +\& reserved instance can be used. +\& +\& \-product_description The reserved instance description. +\& Valid values are "Linux/UNIX", +\& "Linux/UNIX (Amazon VPC)", +\& "Windows", and "Windows (Amazon +\& VPC)" +\& +\& \-instance_tenancy The tenancy of the reserved instance +\& offering, either "default" or +\& "dedicated". (VPC instances only) +\& +\& \-filter A set of filters to apply. +.Ve +.PP +For available filters, see http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeReservedInstancesOfferings.html. +.PP +The returned objects are of type VM::EC2::ReservedInstance::Offering +.PP +This can be combined with the Offering \fIpurchase()\fR method as shown here: +.PP +.Vb 7 +\& @offerings = $ec2\->describe_reserved_instances_offerings( +\& {\*(Aqavailability\-zone\*(Aq => \*(Aqus\-east\-1a\*(Aq, +\& \*(Aqinstance\-type\*(Aq => \*(Aqc1.medium\*(Aq, +\& \*(Aqproduct\-description\*(Aq =>\*(AqLinux/UNIX\*(Aq, +\& \*(Aqduration\*(Aq => 31536000, # this is 1 year +\& }); +\& $offerings[0]\->purchase(5) and print "Five reserved instances purchased\en"; +.Ve +.PP +Purchase one or more reserved instances based on an offering. +.PP +Arguments: +.PP +.Vb 2 +\& \-reserved_instances_offering_id, \-id \-\- The reserved instance offering ID +\& to purchase (required). +\& +\& \-instance_count, \-count \-\- Number of instances to reserve +\& under this offer (optional, defaults +\& to 1). +.Ve +.PP +Returns a Reserved Instances Id on success, undef on failure. Also see the \fIpurchase()\fR method of +VM::EC2::ReservedInstance::Offering. +.ie n .SS "@res_instances = $ec2\->describe_reserved_instances(@res_instance_ids)" +.el .SS "\f(CW@res_instances\fP = \f(CW$ec2\fP\->describe_reserved_instances(@res_instance_ids)" +.IX Subsection "@res_instances = $ec2->describe_reserved_instances(@res_instance_ids)" +.ie n .SS "@res_instances = $ec2\->describe_reserved_instances(%args)" +.el .SS "\f(CW@res_instances\fP = \f(CW$ec2\fP\->describe_reserved_instances(%args)" +.IX Subsection "@res_instances = $ec2->describe_reserved_instances(%args)" +This method returns a list of the reserved instances that you +currently own. The information returned includes the type of +instances that the reservation allows you to launch, the availability +zone, and the cost per hour to run those reserved instances. +.PP +All arguments are optional. If no named arguments are used, then the +arguments are treated as Reserved Instance IDs. +.PP +.Vb 2 +\& \-reserved_instances_id \-\- A scalar or arrayref of reserved +\& instance IDs +\& +\& \-filter \-\- A set of filters to apply. +.Ve +.PP +For available filters, see http://docs.amazonwebservices.com/AWSEC2/2011\-05\-15/APIReference/ApiReference\-query\-DescribeReservedInstances.html. +.PP +The returned objects are of type VM::EC2::ReservedInstance +.SH "SPOT INSTANCES" +.IX Header "SPOT INSTANCES" +These methods allow you to request spot instances and manipulte spot +data feed subscriptoins. +.ie n .SS "$subscription = $ec2\->create_spot_datafeed_subscription($bucket,$prefix)" +.el .SS "\f(CW$subscription\fP = \f(CW$ec2\fP\->create_spot_datafeed_subscription($bucket,$prefix)" +.IX Subsection "$subscription = $ec2->create_spot_datafeed_subscription($bucket,$prefix)" +This method creates a spot datafeed subscription. Provide the method with the +name of an S3 bucket associated with your account, and a prefix to be appended +to the files written by the datafeed. Spot instance usage logs will be written +into the requested bucket, and prefixed with the desired prefix. +.PP +If no prefix is specified, it defaults to \*(L"\s-1SPOT_DATAFEED_\s0\*(R"; +.PP +On success, a VM::EC2::Spot:DatafeedSubscription object is returned; +.PP +Only one datafeed is allowed per account; +.ie n .SS "$boolean = $ec2\->\fIdelete_spot_datafeed_subscription()\fP" +.el .SS "\f(CW$boolean\fP = \f(CW$ec2\fP\->\fIdelete_spot_datafeed_subscription()\fP" +.IX Subsection "$boolean = $ec2->delete_spot_datafeed_subscription()" +This method delete's the current account's spot datafeed +subscription, if any. It takes no arguments. +.PP +On success, it returns true. +.ie n .SS "$subscription = $ec2\->\fIdescribe_spot_datafeed_subscription()\fP" +.el .SS "\f(CW$subscription\fP = \f(CW$ec2\fP\->\fIdescribe_spot_datafeed_subscription()\fP" +.IX Subsection "$subscription = $ec2->describe_spot_datafeed_subscription()" +This method describes the current account's spot datafeed +subscription, if any. It takes no arguments. +.PP +On success, a VM::EC2::Spot:DatafeedSubscription object is returned; +.ie n .SS "@spot_price_history = $ec2\->describe_spot_price_history(@filters)" +.el .SS "\f(CW@spot_price_history\fP = \f(CW$ec2\fP\->describe_spot_price_history(@filters)" +.IX Subsection "@spot_price_history = $ec2->describe_spot_price_history(@filters)" +This method applies the specified filters to spot instances and +returns a list of instances, timestamps and their price at the +indicated time. Each spot price history point is represented as a +VM::EC2::Spot::PriceHistory object. +.PP +Option parameters are: +.PP +.Vb 4 +\& \-start_time Start date and time of the desired history +\& data, in the form yyyy\-mm\-ddThh:mm:ss (GMT). +\& The Perl DateTime module provides a convenient +\& way to create times in this format. +\& +\& \-end_time End date and time of the desired history +\& data. +\& +\& \-instance_type The instance type, e.g. "m1.small", can be +\& a scalar value or an arrayref. +\& +\& \-product_description The product description. One of "Linux/UNIX", +\& "SUSE Linux" or "Windows". Can be a scalar value +\& or an arrayref. +\& +\& \-availability_zone A single availability zone, such as "us\-east\-1a". +\& +\& \-max_results Maximum number of rows to return in a single +\& call. +\& +\& \-next_token Specifies the next set of results to return; used +\& internally. +\& +\& \-filter Hashref containing additional filters to apply, +.Ve +.PP +The following filters are recognized: \*(L"instance-type\*(R", +\&\*(L"product-description\*(R", \*(L"spot-price\*(R", \*(L"timestamp\*(R", +\&\*(L"availability-zone\*(R". The '*' and '?' wildcards can be used in filter +values, but numeric comparison operations are not supported by the +Amazon \s-1API\s0. Note that wildcards are not generally allowed in the +standard options. Hence if you wish to get spot price history in all +availability zones in us-east, this will work: +.PP +.Vb 1 +\& $ec2\->describe_spot_price_history(\-filter=>{\*(Aqavailability\-zone\*(Aq=>\*(Aqus\-east*\*(Aq}) +.Ve +.PP +but this will return an invalid parameter error: +.PP +.Vb 1 +\& $ec2\->describe_spot_price_history(\-availability_zone=>\*(Aqus\-east*\*(Aq) +.Ve +.PP +If you specify \-max_results, then the list of history objects returned +may not represent the complete result set. In this case, the method +\&\fImore_spot_prices()\fR will return true. You can then call +\&\fIdescribe_spot_price_history()\fR repeatedly with no arguments in order to +retrieve the remainder of the results. When there are no more results, +\&\fImore_spot_prices()\fR will return false. +.PP +.Vb 9 +\& my @results = $ec2\->describe_spot_price_history(\-max_results => 20, +\& \-instance_type => \*(Aqm1.small\*(Aq, +\& \-availability_zone => \*(Aqus\-east*\*(Aq, +\& \-product_description=>\*(AqLinux/UNIX\*(Aq); +\& print_history(\e@results); +\& while ($ec2\->more_spot_prices) { +\& @results = $ec2\->describe_spot_price_history +\& print_history(\e@results); +\& } +.Ve +.ie n .SS "@requests = $ec2\->request_spot_instances(%param)" +.el .SS "\f(CW@requests\fP = \f(CW$ec2\fP\->request_spot_instances(%param)" +.IX Subsection "@requests = $ec2->request_spot_instances(%param)" +This method will request one or more spot instances to be launched +when the current spot instance run-hour price drops below a preset +value and terminated when the spot instance run-hour price exceeds the +value. +.PP +On success, will return a series of VM::EC2::Spot::InstanceRequest +objects, one for each instance specified in \-instance_count. +.IP "Required parameters:" 4 +.IX Item "Required parameters:" +.Vb 1 +\& \-spot_price The desired spot price, in USD. +\& +\& \-image_id ID of an AMI to launch +\& +\& \-instance_type Type of the instance(s) to launch, such as "m1.small" +.Ve +.IP "Optional parameters:" 4 +.IX Item "Optional parameters:" +.Vb 1 +\& \-instance_count Maximum number of instances to launch (default 1) +\& +\& \-type Spot instance request type; one of "one\-time" or "persistent" +\& +\& \-valid_from Date/time the request becomes effective, in format +\& yyyy\-mm\-ddThh:mm:ss. Default is immediately. +\& +\& \-valid_until Date/time the request expires, in format +\& yyyy\-mm\-ddThh:mm:ss. Default is to remain in +\& effect indefinitely. +\& +\& \-launch_group Name of the launch group. Instances in the same +\& launch group are started and terminated together. +\& Default is to launch instances independently. +\& +\& \-availability_zone_group If specified, all instances that are given +\& the same zone group name will be launched into the +\& same availability zone. This is independent of +\& the \-availability_zone argument, which specifies +\& a particular availability zone. +\& +\& \-key_name Name of the keypair to use +\& +\& \-security_group_id Security group ID to use for this instance. +\& Use an arrayref for multiple group IDs +\& +\& \-security_group Security group name to use for this instance. +\& Use an arrayref for multiple values. +\& +\& \-user_data User data to pass to the instances. Do NOT base64 +\& encode this. It will be done for you. +\& +\& \-availability_zone The availability zone you want to launch the +\& instance into. Call $ec2\->regions for a list. +\& \-zone Short version of \-availability_aone. +\& +\& \-placement_group An existing placement group to launch the +\& instance into. Applicable to cluster instances +\& only. +\& \-placement_tenancy Specify \*(Aqdedicated\*(Aq to launch the instance on a +\& dedicated server. Only applicable for VPC +\& instances. +\& +\& \-kernel_id ID of the kernel to use for the instances, +\& overriding the kernel specified in the image. +\& +\& \-ramdisk_id ID of the ramdisk to use for the instances, +\& overriding the ramdisk specified in the image. +\& +\& \-block_devices Specify block devices to map onto the instances, +\& overriding the values specified in the image. +\& See run_instances() for the syntax of this argument. +\& +\& \-block_device_mapping Alias for \-block_devices. +\& +\& \-monitoring Pass a true value to enable detailed monitoring. +\& +\& \-subnet_id Subnet ID in which to place instances launched under +\& this request (VPC only). +\& +\& \-addressing_type Deprecated and undocumented, but present in the +\& current EC2 API documentation. +.Ve +.ie n .SS "@requests = $ec2\->cancel_spot_instance_requests(@request_ids)" +.el .SS "\f(CW@requests\fP = \f(CW$ec2\fP\->cancel_spot_instance_requests(@request_ids)" +.IX Subsection "@requests = $ec2->cancel_spot_instance_requests(@request_ids)" +This method cancels the pending requests. It does not terminate any +instances that are already running as a result of the requests. It +returns a list of VM::EC2::Spot::InstanceRequest objects, whose fields +will be unpopulated except for spotInstanceRequestId and state. +.ie n .SS "@requests = $ec2\->describe_spot_instance_requests(\-spot_instance_request_id=>\e@ids,\-filter=>\e%filters)" +.el .SS "\f(CW@requests\fP = \f(CW$ec2\fP\->describe_spot_instance_requests(\-spot_instance_request_id=>\e@ids,\-filter=>\e%filters)" +.IX Subsection "@requests = $ec2->describe_spot_instance_requests(-spot_instance_request_id=>@ids,-filter=>%filters)" +.ie n .SS "@requests = $ec2\->describe_spot_instance_requests(@spot_instance_request_ids)" +.el .SS "\f(CW@requests\fP = \f(CW$ec2\fP\->describe_spot_instance_requests(@spot_instance_request_ids)" +.IX Subsection "@requests = $ec2->describe_spot_instance_requests(@spot_instance_request_ids)" +.ie n .SS "@requests = $ec2\->describe_spot_instance_requests(\e%filters)" +.el .SS "\f(CW@requests\fP = \f(CW$ec2\fP\->describe_spot_instance_requests(\e%filters)" +.IX Subsection "@requests = $ec2->describe_spot_instance_requests(%filters)" +This method will return information about current spot instance +requests as a list of VM::EC2::Spot::InstanceRequest objects. +.PP +Optional parameters: +.PP +.Vb 1 +\& \-spot_instance_request_id \-\- Scalar or arrayref of request Ids. +\& +\& \-filter \-\- Tags and other filters to apply. +.Ve +.PP +There are many filters available, described fully at http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/index.html?ApiReference\-ItemType\-SpotInstanceRequestSetItemType.html: +.PP +.Vb 10 +\& availability\-zone\-group +\& create\-time +\& fault\-code +\& fault\-message +\& instance\-id +\& launch\-group +\& launch.block\-device\-mapping.delete\-on\-termination +\& launch.block\-device\-mapping.device\-name +\& launch.block\-device\-mapping.snapshot\-id +\& launch.block\-device\-mapping.volume\-size +\& launch.group\-id +\& launch.image\-id +\& launch.instance\-type +\& launch.kernel\-id +\& launch.key\-name +\& launch.monitoring\-enabled +\& launch.ramdisk\-id +\& product\-description +\& spot\-instance\-request\-id +\& spot\-price +\& state +\& tag\-key +\& tag\-value +\& tag: +\& type +\& launched\-availability\-zone +\& valid\-from +\& valid\-until +.Ve +.SH "INTERNAL METHODS" +.IX Header "INTERNAL METHODS" +These methods are used internally and are listed here without +documentation (yet). +.ie n .SS "$underscore_name = $ec2\->canonicalize($mixedCaseName)" +.el .SS "\f(CW$underscore_name\fP = \f(CW$ec2\fP\->canonicalize($mixedCaseName)" +.IX Subsection "$underscore_name = $ec2->canonicalize($mixedCaseName)" +.ie n .SS "$instance_id = $ec2\->instance_parm(@args)" +.el .SS "\f(CW$instance_id\fP = \f(CW$ec2\fP\->instance_parm(@args)" +.IX Subsection "$instance_id = $ec2->instance_parm(@args)" +.ie n .SS "@parameters = $ec2\->value_parm(ParameterName => \e%args)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->value_parm(ParameterName => \e%args)" +.IX Subsection "@parameters = $ec2->value_parm(ParameterName => %args)" +.ie n .SS "@parameters = $ec2\->single_parm(ParameterName => \e%args)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->single_parm(ParameterName => \e%args)" +.IX Subsection "@parameters = $ec2->single_parm(ParameterName => %args)" +.ie n .SS "@parameters = $ec2\->list_parm(ParameterName => \e%args)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->list_parm(ParameterName => \e%args)" +.IX Subsection "@parameters = $ec2->list_parm(ParameterName => %args)" +.ie n .SS "@parameters = $ec2\->filter_parm(\e%args)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->filter_parm(\e%args)" +.IX Subsection "@parameters = $ec2->filter_parm(%args)" +.ie n .SS "@parameters = $ec2\->tagcreate_parm(\e%args)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->tagcreate_parm(\e%args)" +.IX Subsection "@parameters = $ec2->tagcreate_parm(%args)" +.ie n .SS "@parameters = $ec2\->tagdelete_parm(\e%args)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->tagdelete_parm(\e%args)" +.IX Subsection "@parameters = $ec2->tagdelete_parm(%args)" +.ie n .SS "@parameters = $ec2\->key_value_parm($param_name,$keyname,$valuename,\e%args,$skip_undef_values)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->key_value_parm($param_name,$keyname,$valuename,\e%args,$skip_undef_values)" +.IX Subsection "@parameters = $ec2->key_value_parm($param_name,$keyname,$valuename,%args,$skip_undef_values)" +.ie n .SS "@parameters = $ec2\->launch_perm_parm($prefix,$suffix,$value)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->launch_perm_parm($prefix,$suffix,$value)" +.IX Subsection "@parameters = $ec2->launch_perm_parm($prefix,$suffix,$value)" +.ie n .SS "@parameters = $ec2\->block_device_parm($block_device_mapping_string)" +.el .SS "\f(CW@parameters\fP = \f(CW$ec2\fP\->block_device_parm($block_device_mapping_string)" +.IX Subsection "@parameters = $ec2->block_device_parm($block_device_mapping_string)" +.ie n .SS "$version = $ec2\->\fIversion()\fP" +.el .SS "\f(CW$version\fP = \f(CW$ec2\fP\->\fIversion()\fP" +.IX Subsection "$version = $ec2->version()" +\&\s-1API\s0 version. +.ie n .SS "$ts = $ec2\->timestamp" +.el .SS "\f(CW$ts\fP = \f(CW$ec2\fP\->timestamp" +.IX Subsection "$ts = $ec2->timestamp" +.ie n .SS "$ua = $ec2\->ua" +.el .SS "\f(CW$ua\fP = \f(CW$ec2\fP\->ua" +.IX Subsection "$ua = $ec2->ua" +LWP::UserAgent object. +.ie n .SS "@obj = $ec2\->call($action,@param);" +.el .SS "\f(CW@obj\fP = \f(CW$ec2\fP\->call($action,@param);" +.IX Subsection "@obj = $ec2->call($action,@param);" +Make a call to Amazon using \f(CW$action\fR and the passed parameters, and +return a list of objects. +.ie n .SS "$request = $ec2\->make_request($action,@param);" +.el .SS "\f(CW$request\fP = \f(CW$ec2\fP\->make_request($action,@param);" +.IX Subsection "$request = $ec2->make_request($action,@param);" +Set up the signed HTTP::Request object. +.ie n .SS "$request = $ec2\->_sign(@args)" +.el .SS "\f(CW$request\fP = \f(CW$ec2\fP\->_sign(@args)" +.IX Subsection "$request = $ec2->_sign(@args)" +Create and sign an HTTP::Request. +.ie n .SS "@param = $ec2\->args(ParamName=>@_)" +.el .SS "\f(CW@param\fP = \f(CW$ec2\fP\->args(ParamName=>@_)" +.IX Subsection "@param = $ec2->args(ParamName=>@_)" +Set up calls that take either method(\-resource_id=>'foo') or method('foo'). +.SH "MISSING METHODS" +.IX Header "MISSING METHODS" +As of 27 July 2011, the following Amazon \s-1API\s0 calls were \s-1NOT\s0 implemented: +.PP +AssociateDhcpOptions +AssociateRouteTable +AttachInternetGateway +AttachVpnGateway +BundleInstance +CancelBundleTask +CancelConversionTask +CancelSpotInstanceRequests +ConfirmProductInstance +CreateCustomerGateway +CreateDhcpOptions +CreateInternetGateway +CreateNetworkAcl +CreateNetworkAclEntry +CreatePlacementGroup +CreateRoute +CreateRouteTable +CreateSpotDatafeedSubscription +CreateSubnet +CreateVpc +CreateVpnConnection +CreateVpnGateway +DeleteCustomerGateway +DeleteDhcpOptions +DeleteInternetGateway +DeleteNetworkAcl +DeleteNetworkAclEntry +DeletePlacementGroup +DeleteRoute +DeleteRouteTable +DeleteSpotDatafeedSubscription +DeleteSubnet +DeleteVpc +DeleteVpnConnection +DeleteVpnGateway +DescribeBundleTasks +DescribeConversionTasks +DescribeCustomerGateways +DescribeDhcpOptions +DescribeNetworkAcls +DescribePlacementGroups +DescribeRouteTables +DescribeSpotDatafeedSubscription +DescribeSpotInstanceRequests +DescribeSpotPriceHistory +DescribeSubnets +DescribeVpcs +DescribeVpnConnections +DescribeVpnGateways +DetachInternetGateway +DetachVpnGateway +DisassociateRouteTable +ImportInstance +ReplaceNetworkAclAssociation +ReplaceNetworkAclEntry +ReplaceRoute +ReplaceRouteTableAssociation +RequestSpotInstances +.SH "OTHER INFORMATION" +.IX Header "OTHER INFORMATION" +This section contains technical information that may be of interest to developers. +.SS "Signing and authentication protocol" +.IX Subsection "Signing and authentication protocol" +This module uses Amazon \s-1AWS\s0 signing protocol version 2, as described +at +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?using\-query\-api.html. It +uses the HmacSHA256 signature method, which is the most secure method +currently available. For additional security, use \*(L"https\*(R" for the +communications endpoint: +.PP +.Vb 1 +\& $ec2 = VM::EC2\->new(\-endpoint=>\*(Aqhttps://ec2.amazonaws.com\*(Aq); +.Ve +.SS "Subclassing \s-1VM::EC2\s0 objects" +.IX Subsection "Subclassing VM::EC2 objects" +To subclass \s-1VM::EC2\s0 objects (or implement your own from scratch) you +will need to override the object dispatch mechanism. Fortunately this +is very easy. After \*(L"use \s-1VM::EC2\s0\*(R" call +VM::EC2::Dispatch\->\fIadd_override()\fR one or more times: +.PP +.Vb 1 +\& VM::EC2::Dispatch\->add_override($call_name => $dispatch). +.Ve +.PP +The first argument, \f(CW$call_name\fR, is name of the Amazon \s-1API\s0 call, such as \*(L"DescribeImages\*(R". +.PP +The second argument, \f(CW$dispatch\fR, instructs VM::EC2::Dispatch how to +create objects from the parsed \s-1XML\s0. There are three possible syntaxes: +.PP +.Vb 1 +\& 1) A CODE references, such as an anonymous subroutine. +\& +\& In this case the code reference will be invoked to handle the +\& parsed XML returned from the request. The code will receive +\& two arguments consisting of the parsed +\& content of the response, and the VM::EC2 object used to generate the +\& request. +\& +\& 2) A VM::EC2::Dispatch method name, optionally followed by its parameters +\& delimited by commas. Example: +\& +\& "fetch_items,securityGroupInfo,VM::EC2::SecurityGroup" +\& +\& This tells Dispatch to invoke its fetch_items() method with +\& the following arguments: +\& +\& $dispatch\->fetch_items($parsed_xml,$ec2,\*(AqsecurityGroupInfo\*(Aq,\*(AqVM::EC2::SecurityGroup\*(Aq) +\& +\& The fetch_items() method is used for responses in which a +\& list of objects is embedded within a series of tags. +\& See L for more information. +\& +\& Other commonly\-used methods are "fetch_one", and "boolean". +\& +\& 3) A class name, such as \*(AqMyVolume\*(Aq +\& +\& In this case, class MyVolume is loaded and then its new() method +\& is called with the four arguments ($parsed_xml,$ec2,$xmlns,$requestid), +\& where $parsed_xml is the parsed XML response, $ec2 is the VM::EC2 +\& object that generated the request, $xmlns is the XML namespace +\& of the XML response, and $requestid is the AWS\-generated ID for the +\& request. Only the first two arguments are really useful. +\& +\& I suggest you inherit from VM::EC2::Generic and use the inherited new() +\& method to store the parsed XML object and other arguments. +.Ve +.PP +Dispatch tries each of (1), (2) and (3), in order. This means that +class names cannot collide with method names. +.PP +The parsed content is the result of passing the raw \s-1XML\s0 through a +XML::Simple object created with: +.PP +.Vb 3 +\& XML::Simple\->new(ForceArray => [\*(Aqitem\*(Aq], +\& KeyAttr => [\*(Aqkey\*(Aq], +\& SuppressEmpty => undef); +.Ve +.PP +In general, this will give you a hash of hashes. Any tag named 'item' +will be forced to point to an array reference, and any tag named \*(L"key\*(R" +will be flattened as described in the XML::Simple documentation. +.PP +A simple way to examine the raw parsed \s-1XML\s0 is to invoke any +VM::EC2::Generic's \fIas_string()\fR method: +.PP +.Vb 2 +\& my ($i) = $ec2\->describe_instances; +\& print $i\->as_string; +.Ve +.PP +This will give you a Data::Dumper representation of the \s-1XML\s0 after it +has been parsed. +.PP +The suggested way to override the dispatch table is from within a +subclass of \s-1VM::EC2:\s0 +.PP +.Vb 8 +\& package \*(AqVM::EC2New\*(Aq; +\& use base \*(AqVM::EC2\*(Aq; +\& sub new { +\& my $self=shift; +\& VM::EC2::Dispatch\->add_override(\*(Aqcall_name_1\*(Aq=>\e&subroutine1). +\& VM::EC2::Dispatch\->add_override(\*(Aqcall_name_2\*(Aq=>\e&subroutine2). +\& $self\->SUPER::new(@_); +\& } +.Ve +.PP +See VM::EC2::Dispatch for a working example of subclassing \s-1VM::EC2\s0 +and one of its object classes. +.SH "DEVELOPING" +.IX Header "DEVELOPING" +The git source for this library can be found at https://github.com/lstein/LibVM\-EC2\-Perl, +To contribute to development, please obtain a github account and then either: +.PP +.Vb 2 +\& 1) Fork a copy of the repository, make your changes against this repository, +\& and send a pull request to me to incorporate your changes. +\& +\& 2) Contact me by email and ask for push privileges on the repository. +.Ve +.PP +See http://help.github.com/ for help getting started. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +Net::Amazon::EC2 +VM::EC2::Dispatch +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +VM::EC2::BlockDevice::EBS +VM::EC2::BlockDevice::Mapping +VM::EC2::BlockDevice::Mapping::EBS +VM::EC2::Error +VM::EC2::Generic +VM::EC2::Group +VM::EC2::Image +VM::EC2::Instance +VM::EC2::Instance::ConsoleOutput +VM::EC2::Instance::Metadata +VM::EC2::Instance::MonitoringState +VM::EC2::Instance::PasswordData +VM::EC2::Instance::Set +VM::EC2::Instance::State +VM::EC2::Instance::State::Change +VM::EC2::Instance::State::Reason +VM::EC2::KeyPair +VM::EC2::Region +VM::EC2::ReservationSet +VM::EC2::ReservedInstance +VM::EC2::ReservedInstance::Offering +VM::EC2::SecurityGroup +VM::EC2::Snapshot +VM::EC2::Tag +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. +.SH "POD ERRORS" +.IX Header "POD ERRORS" +Hey! \fBThe above document had some coding errors, which are explained below:\fR +.IP "Around line 2618:" 4 +.IX Item "Around line 2618:" +Unknown directive: =head +.IP "Around line 2620:" 4 +.IX Item "Around line 2620:" +Unknown directive: =head +.IP "Around line 2964:" 4 +.IX Item "Around line 2964:" +You forgot a '=back' before '=head2' diff --git a/perl/man/man3/VM::EC2::AvailabilityZone.3pm b/perl/man/man3/VM::EC2::AvailabilityZone.3pm new file mode 100644 index 0000000..e9ca54b --- /dev/null +++ b/perl/man/man3/VM::EC2::AvailabilityZone.3pm @@ -0,0 +1,180 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::AvailabilityZone 3pm" +.TH VM::EC2::AvailabilityZone 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::AvailabilityZone \- Object describing an Amazon availability zone +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @zones = $ec2\->describe_availability_zones(\-filter=>{state=>\*(Aqavailable\*(Aq}); +\& +\& $zone = $zones[0]; +\& $name = $zone\->zoneName; +\& @messages= $zone\->messages; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 availability zone, and is returned +by \s-1VM::EC2\-\s0>\fIdescribe_availability_zones()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 5 +\& zoneName \-\- Name of the zone, e.g. "eu\-west\-1a" +\& zoneState \-\- State of the availability zone, e.g. "available" +\& regionName \-\- Name of the region +\& region \-\- A VM::EC2::Region object corresponding to regionName +\& messages \-\- A list of messages about the zone +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +zoneName. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Region +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::BlockDevice.3pm b/perl/man/man3/VM::EC2::BlockDevice.3pm new file mode 100644 index 0000000..8edfe0d --- /dev/null +++ b/perl/man/man3/VM::EC2::BlockDevice.3pm @@ -0,0 +1,214 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::BlockDevice 3pm" +.TH VM::EC2::BlockDevice 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::BlockDevice \- Object describing how to construct an EC2 block device when launching an image +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $image = $ec2\->describe_images(\-image_id=>\*(Aqami\-123456\*(Aq); +\& my @devices = $image\->blockDeviceMapping; +\& for my $d (@devices) { +\& my $virtual_device = $d\->deviceName; +\& my $snapshot_id = $d\->snapshotId; +\& my $volume_size = $d\->volumeSize; +\& my $delete = $d\->deleteOnTermination; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon block device associated with an \s-1AMI\s0. +The information in it is used to create a new volume when the \s-1AMI\s0 is launched. +The object is returned by \s-1VM::EC2\-\s0>\fIdescribe_images()\fR. +.PP +Please see VM::EC2::Generic for methods shared by all \s-1VM::EC2\s0 +objects. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 6 +\& deviceName \-\- name of the device, such as /dev/sda1 +\& virtualName \-\- virtual device name, such as "ephemeral0" +\& noDevice \-\- true if no device associated +\& ebs \-\- parameters used to automatically set up Amazon EBS +\& volumes when an instance is booted. This returns +\& a VM::EC2::BlockDevice::EBS object. +.Ve +.PP +For your convenience, a number of the \fIebs()\fR object's methods are +passed through: +.PP +.Vb 5 +\& snapshotId \-\- ID of the snapshot used to create this EBS when an +\& instance is launched from this image. +\& volumeSize \-\- Size of the EBS volume (in gigs). +\& deleteOnTermination \-\- Whether this EBS will be deleted when the +\& instance terminates. +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will be interpolated as: +.PP +.Vb 1 +\& deviceName=snapshotId:volumeSize:deleteOnTermination +.Ve +.PP +e.g. +.PP +.Vb 1 +\& /dev/sdg=snap\-12345:20:true +.Ve +.PP +This happens to be the same syntax used to specify block device +mappings in \fIrun_instances()\fR. See \s-1VM::EC2\s0. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +VM::EC2::BlockDevice::EBS +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::BlockDevice::Attachment.3pm b/perl/man/man3/VM::EC2::BlockDevice::Attachment.3pm new file mode 100644 index 0000000..6e22d17 --- /dev/null +++ b/perl/man/man3/VM::EC2::BlockDevice::Attachment.3pm @@ -0,0 +1,227 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::BlockDevice::Attachment 3pm" +.TH VM::EC2::BlockDevice::Attachment 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::BlockDevice::Attachment \- Object describing the attachment of an EBS volume to an instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $volume = $ec2\->describe_volumes(\-volume_id=>\*(Aqvol\-12345\*(Aq); +\& $attachment = $ec2\->attachment; +\& +\& $volId = $attachment\->volumeId; +\& $device = $attachment\->device; +\& $instanceId = $attachment\->instanceId; +\& $status = $attachment\->status; +\& $time = $attachment\->attachTime; +\& $delete = $attachment\->deleteOnTermination; +\& $attachment\->deleteOnTermination(1); # change delete flag +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe the attachment of an Amazon \s-1EBS\s0 volume +to an instance. It is returned by VM::EC2::Volume\->\fIattachment()\fR. +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 8 +\& volumeId \-\- ID of the volume. +\& instanceId \-\- ID of the instance +\& status \-\- Attachment state, one of "attaching", "attached", +\& "detaching", "detached". +\& attachTime \-\- Timestamp for when volume was attached +\& deleteOnTermination \-\- True if the EBS volume will be deleted when its +\& attached instance terminates. Note that this is a +\& Perl true, and not the string "true". +.Ve +.PP +The deleteOnTermination method is slightly more sophisticated than +the result from the standard \s-1AWS\s0 \s-1API\s0 because it returns the \s-1CURRENT\s0 +deleteOnTermination flag for the attachment, which might have been +changed by \s-1VM::EC2\-\s0>\fImodify_instance_attributes()\fR. You may also change +the deleteOnTermination state by passing a boolean argument to the +method: +.PP +.Vb 1 +\& $attachment\->deleteOnTermination(1); +.Ve +.PP +In addition, this class provides several convenience functions: +.ie n .SS "$instance = $attachment\->instance" +.el .SS "\f(CW$instance\fP = \f(CW$attachment\fP\->instance" +.IX Subsection "$instance = $attachment->instance" +Returns the VM::EC2::Instance corresponding to this attachment. +.ie n .SS "$volume = $attachment\->volume" +.el .SS "\f(CW$volume\fP = \f(CW$attachment\fP\->volume" +.IX Subsection "$volume = $attachment->volume" +Returns the VM::EC2::Volume object corresponding to this +attachment. +.ie n .SS "$device = $attachment\->deviceName" +.el .SS "\f(CW$device\fP = \f(CW$attachment\fP\->deviceName" +.IX Subsection "$device = $attachment->deviceName" +Alias for \fIdevice()\fR to be compatible with VM::EC2::BlockDevice::Mapping call. +.ie n .SS "$result = $attachment\->deleteOnTermination($boolean)" +.el .SS "\f(CW$result\fP = \f(CW$attachment\fP\->deleteOnTermination($boolean)" +.IX Subsection "$result = $attachment->deleteOnTermination($boolean)" +Change the deleteOnTermination flag on this attachment. +.ie n .SS "$status = $attachment\->current_status" +.el .SS "\f(CW$status\fP = \f(CW$attachment\fP\->current_status" +.IX Subsection "$status = $attachment->current_status" +Refreshes the information in the object and returns \fIstatus()\fR. +.ie n .SS "$attachment\->refresh" +.el .SS "\f(CW$attachment\fP\->refresh" +.IX Subsection "$attachment->refresh" +Calls \s-1AWS\s0 to refresh the attachment information. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate into a +string of the format \*(L"volumeId=>instanceId\*(R". +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::BlockDevice::EBS.3pm b/perl/man/man3/VM::EC2::BlockDevice::EBS.3pm new file mode 100644 index 0000000..94536c4 --- /dev/null +++ b/perl/man/man3/VM::EC2::BlockDevice::EBS.3pm @@ -0,0 +1,195 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::BlockDevice::EBS 3pm" +.TH VM::EC2::BlockDevice::EBS 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::BlockDevice::EBS \- Object describing how to initialize an Amazon EBS volume from an image +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $image = $ec2\->describe_images(\-image_id=>\*(Aqami\-123456\*(Aq); +\& my @devices = $image\->blockDeviceMapping; +\& for my $d (@devices) { +\& my $ebs = $d\->ebs; +\& my $snapshot_id = $ebs\->snapshotId; +\& my $size = $ebs\->volumeSize; +\& my $delete = $ebs\->deleteOnTermination; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe the parameters used to create an +Amazon \s-1EBS\s0 volume when running an image. Generally you will not call +this directly, as all its methods are passed through by the +VM::EC2::BlockDevice object returned from the +\&\fIblockDeviceMapping()\fR call. +.PP +See VM::EC2::BlockDevice for a simpler way to get the +information needed. +.PP +It is easy to confuse this with +VM::EC2::BlockDevice::Mapping::EBS, which describes the +attachment of an existing \s-1EBS\s0 volume to an instance. This class is +instead used to store the parameters that will be used to generate a +new \s-1EBS\s0 volume when an image is launched. +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 6 +\& snapshotId \-\- ID of the snapshot used to create this EBS when an +\& instance is launched from this image. +\& volumeSize \-\- Size of the EBS volume (in gigs). +\& deleteOnTermination \-\- Whether this EBS will be deleted when the +\& instance terminates. Note that this will return +\& perl 0/1 values rather than the strings "false"/"true" +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +\&\s-1NONE\s0. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Snapshot +VM::EC2::BlockDevice +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::BlockDevice::Mapping.3pm b/perl/man/man3/VM::EC2::BlockDevice::Mapping.3pm new file mode 100644 index 0000000..8b2998e --- /dev/null +++ b/perl/man/man3/VM::EC2::BlockDevice::Mapping.3pm @@ -0,0 +1,220 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::BlockDevice::Mapping 3pm" +.TH VM::EC2::BlockDevice::Mapping 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::BlockDevice::Mapping \- Object describing an EC2 block device attached to an instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-123456\*(Aq); +\& my @devices = $instance\->blockDeviceMapping; +\& for my $dev (@devices) { +\& $dev = $dev\->deviceName; +\& $volume_id = $dev\->volumeId; +\& $status = $dev\->status; +\& $atime = $dev\->attachmentTime; +\& $delete = $dev\->deleteOnTermination; +\& $volume = $dev\->volume; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon block device associated with an instance; +it is returned by Instance\->\fIblockDeviceMapping()\fR. +.PP +Please see VM::EC2::Generic for methods shared by all \s-1VM::EC2\s0 +objects. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 5 +\& deviceName \-\- Name of the device, such as /dev/sda1. +\& instance \-\- Instance object associated with this volume. +\& ebs \-\- A VM::EC2::BlockDevice::Mapping::EBS object +\& describing the characteristics of the attached +\& EBS volume +.Ve +.PP +For your convenience, a number of the \fIebs()\fR object's methods are +passed through: +.PP +.Vb 6 +\& volumeId \-\- ID of the volume. +\& status \-\- One of "attaching", "attached", "detaching", "detached" +\& attachTime \-\- Time this volume was attached +\& deleteOnTermination \-\- Whether the volume will be deleted when its attached +\& instance is deleted. Note that this will return perl true/false +\& vales, rather than the strings "true" "false". +.Ve +.PP +The \fIdeleteOnTermination()\fR method can be used to retrieve or modify this flag: +.PP +.Vb 2 +\& # get current deleteOnTermination flag +\& my $current_flag = $dev\->deleteOnTermination; +\& +\& # if flag is true, then set it to false +\& if ($current_flag) { $dev\->deleteOnTermination(0) } +.Ve +.PP +In addition, the following convenience function is provided: +.ie n .SS "$volume = $dev\->volume" +.el .SS "\f(CW$volume\fP = \f(CW$dev\fP\->volume" +.IX Subsection "$volume = $dev->volume" +This returns a VM::EC2::Volume object from which more +information about the volume, such as its size, can be derived. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will be interpolated as the +deviceName. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +VM::EC2::BlockDevice::Mapping::EBS +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::BlockDevice::Mapping::EBS.3pm b/perl/man/man3/VM::EC2::BlockDevice::Mapping::EBS.3pm new file mode 100644 index 0000000..b7b2cc4 --- /dev/null +++ b/perl/man/man3/VM::EC2::BlockDevice::Mapping::EBS.3pm @@ -0,0 +1,216 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::BlockDevice::Mapping::EBS 3pm" +.TH VM::EC2::BlockDevice::Mapping::EBS 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::BlockDevice::Mapping::EBS \- Object describing an EBS volume that has been mapped onto an Amazon EC2 instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& my $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-123456\*(Aq); +\& my @devices = $instance\->blockDeviceMapping; +\& for my $d (@devices) { +\& my $ebs = $d\->ebs; +\& $volume_id = $ebs\->volumeId; +\& $status = $ebs\->status; +\& $atime = $ebs\->attachmentTime; +\& $delete = $ebs\->delete; +\& $volume = $ebs\->volume; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe an Amazon \s-1EBS\s0 volume that is mapped +onto an \s-1EC2\s0 block device. It is returned by +\&\s-1VM::EC2\-\s0>\fIdescribe_instances()\fR. +.PP +It is easy to confuse this with VM::EC2::BlockDevice::EBS, which +describes the parameters needed to create the \s-1EBS\s0 volume when an image +is launched. This class is instead used to describe an active mapping +between an instance's block device and the underlying \s-1EBS\s0 volume. +.PP +Because all the methods in this class are passed through to +VM::EC2::BlockDeviceMapping, it is somewhat simpler to call +them directly on the BlockDeviceMapping object: +.PP +.Vb 9 +\& my $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-123456\*(Aq); +\& my @devices = $instance\->blockDeviceMapping; +\& for my $d (@devices) { +\& $volume_id = $d\->volumeId; +\& $status = $d\->status; +\& $atime = $d\->attachmentTime; +\& $delete = $d\->delete; +\& $volume = $d\->volume; +\& } +.Ve +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 6 +\& volumeId \-\- ID of the volume. +\& status \-\- One of "attaching", "attached", "detaching", "detached" +\& attachTime \-\- Time this volume was attached +\& deleteOnTermination \-\- Whether the volume will be deleted when its attached +\& instance is deleted. Note that this returns the perl +\& 0/1 booleans rather than "false"/"true" strings. +.Ve +.PP +In addition, the following convenience method is supported: +.ie n .SS "$vol = $ebs\->volume" +.el .SS "\f(CW$vol\fP = \f(CW$ebs\fP\->volume" +.IX Subsection "$vol = $ebs->volume" +This returns the VM::EC2::Volume object that corresponds to this +\&\s-1EBS\s0. The volume will provide additional information, such as +availabilit zone. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +\&\s-1NONE\s0 +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Snapshot +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Dispatch.3pm b/perl/man/man3/VM::EC2::Dispatch.3pm new file mode 100644 index 0000000..8ffff4e --- /dev/null +++ b/perl/man/man3/VM::EC2::Dispatch.3pm @@ -0,0 +1,370 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Dispatch 3pm" +.TH VM::EC2::Dispatch 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Dispatch \- Create Perl objects from AWS XML requests +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& VM::EC2::Dispatch\->add_override(\*(AqDescribeRegions\*(Aq=>\e&mysub); +\& +\& VM::EC2::Dispatch\->add_override(\*(AqDescribeTags\*(Aq=>\*(AqMy::Type\*(Aq); +\& +\& sub mysub { +\& my ($parsed_xml_object,$ec2) = @_; +\& my $payload = $parsed_xml_object\->{regionInfo} +\& return My::Type\->new($payload,$ec2); +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This class handles turning the \s-1XML\s0 response to \s-1AWS\s0 requests into perl +objects. Only one method is likely to be useful to developers, the +\&\fIadd_override()\fR class method. This allows you to replace the handlers +used to map the response onto objects. +.SS "VM::EC2::Dispatch\->add_override($request_name => \e&sub)" +.IX Subsection "VM::EC2::Dispatch->add_override($request_name => &sub)" +.SS "VM::EC2::Dispatch\->add_override($request_name => 'Class::Name')" +.IX Subsection "VM::EC2::Dispatch->add_override($request_name => 'Class::Name')" +.SS "VM::EC2::Dispatch\->add_override($request_name => 'method_name,arg1,arg2,...')" +.IX Subsection "VM::EC2::Dispatch->add_override($request_name => 'method_name,arg1,arg2,...')" +Before invoking a \s-1VM::EC2\s0 request you wish to customize, call the +\&\fIadd_override()\fR method with two arguments. The first argument is the +name of the request you wish to customize, such as +\&\*(L"DescribeVolumes\*(R". The second argument is either a code reference, a +VM::EC2::Dispatch method name and arguments (separated by commas), or +a class name. +.PP +In the case of a code reference as the second argument, the subroutine +you provide will be invoked with four arguments consisting of the +parsed \s-1XML\s0 response, the \s-1VM::EC2\s0 object, the \s-1XML\s0 namespace string from +the request, and the Amazon-assigned request \s-1ID\s0. In practice, only the +first two arguments are useful. +.PP +In the case of a string containing a classname, the class will be +loaded if it needs to be, and then its \fInew()\fR method invoked as +follows: +.PP +.Vb 1 +\& Your::Class\->new($parsed_xml,$ec2,$xmlns,$requestid) +.Ve +.PP +Your \fInew()\fR method should return one or more objects. It is suggested +that you subclass VM::EC2::Generic and use the inherited \fInew()\fR method +to store the parsed \s-1XML\s0 and \s-1EC2\s0 object. See the code for +VM::EC2::AvailabilityRegion for a simple template. +.PP +If the second argument is neither a code reference nor a classname, it +will be treated as a VM::EC2::Dispatch method name and its arguments, +separated by commas. The method will be invoked as follows: +.PP +.Vb 1 +\& $dispatch\->$method_name($raw_xml,$ec2,$arg1,$arg2,$arg3,...) +.Ve +.PP +There are two methods currently defined for this purpose, \fIboolean()\fR, +and \fIfetch_items()\fR, which handle the preprocessing of several common +\&\s-1XML\s0 representations of \s-1EC2\s0 data. Note that in this form, the \s-1RAW\s0 \s-1XML\s0 +is passed in, not the parsed data structure. +.PP +The parsed \s-1XML\s0 response is generated by the XML::Simple module using +these options: +.PP +.Vb 4 +\& $parser = XML::Simple\->new(ForceArray => [\*(Aqitem\*(Aq], +\& KeyAttr => [\*(Aqkey\*(Aq], +\& SuppressEmpty => undef); +\& $parsed = $parser\->XMLin($raw_xml) +.Ve +.PP +In general, this will give you a hash of hashes. Any tag named 'item' +will be forced to point to an array reference, and any tag named \*(L"key\*(R" +will be flattened as described in the XML::Simple documentation. +.PP +A simple way to examine the raw parsed \s-1XML\s0 is to invoke any +VM::EC2::Object's as_string method: +.PP +.Vb 2 +\& my ($i) = $ec2\->describe_instances; +\& print $i\->as_string; +.Ve +.PP +This will give you a Data::Dumper representation of the \s-1XML\s0 after it +has been parsed. +.PP +Look at the data structure \*(L"ObjectRegistration\*(R" in the source code for +this module to see many examples of response to object mapping. +.SH "OBJECT CREATION METHODS" +.IX Header "OBJECT CREATION METHODS" +The following methods perform simple pre-processing of the parsed \s-1XML\s0 +(a hash of hashes) before passing the modified data structure to the +designated object class. They are used as the second argument to +\&\fIadd_override()\fR +.ie n .SS "$bool = $dispatch\->boolean($raw_xml,$ec2,$tag)" +.el .SS "\f(CW$bool\fP = \f(CW$dispatch\fP\->boolean($raw_xml,$ec2,$tag)" +.IX Subsection "$bool = $dispatch->boolean($raw_xml,$ec2,$tag)" +This is used for \s-1XML\s0 responses like this: +.PP +.Vb 4 +\& +\& 59dbff89\-35bd\-4eac\-99ed\-be587EXAMPLE +\& true +\& +.Ve +.PP +It looks inside the structure for the tag named \f(CW$tag\fR (\*(L"return\*(R" if not +provided), and returns a true value if the contents equals \*(L"true\*(R". +.PP +Pass it to \fIadd_override()\fR like this: +.PP +.Vb 1 +\& VM::EC2::Dispatch\->add_override(DeleteVolume => \*(Aqboolean,return\*(Aq; +.Ve +.PP +or, since \*(L"return\*(R" is the default tag: +.PP +.Vb 1 +\& VM::EC2::Dispatch\->add_override(DeleteVolume => \*(Aqboolean\*(Aq; +.Ve +.ie n .SS "@objects = $dispatch\->fetch_items($raw_xml,$ec2,$container_tag,$object_class,$nokey)" +.el .SS "\f(CW@objects\fP = \f(CW$dispatch\fP\->fetch_items($raw_xml,$ec2,$container_tag,$object_class,$nokey)" +.IX Subsection "@objects = $dispatch->fetch_items($raw_xml,$ec2,$container_tag,$object_class,$nokey)" +This is used for \s-1XML\s0 responses like this: +.PP +.Vb 10 +\& +\& 59dbff89\-35bd\-4eac\-99ed\-be587EXAMPLE +\& +\& +\& gsg\-keypair +\& +\& 1f:51:ae:28:bf:89:e9:d8:1f:25:5d:37:2d:7d:b8:ca:9f:f5:f1:6f +\& +\& +\& +\& default\-keypair +\& +\& 0a:93:bb:e8:c2:89:e9:d8:1f:42:5d:37:1d:8d:b8:0a:88:f1:f1:1a +\& +\& +\& +\& +.Ve +.PP +It looks inside the structure for the tag named \f(CW$container_tag\fR, pulls +out the items that are stored under and then passes the parsed +contents to \f(CW$object_class\fR\->\fInew()\fR. The optional \f(CW$nokey\fR argument is used +to suppress XML::Simple's default flattening behavior turning tags +named \*(L"key\*(R" into hash keys. +.PP +Pass it to \fIadd_override()\fR like this: +.PP +.Vb 1 +\& VM::EC2::Dispatch\->add_override(DescribeVolumes => \*(Aqfetch_items,volumeSet,VM::EC2::Volume\*(Aq) +.Ve +.SH "EXAMPLE OF USING OVERRIDE TO SUBCLASS VM::EC2::Volume" +.IX Header "EXAMPLE OF USING OVERRIDE TO SUBCLASS VM::EC2::Volume" +The author decided that a volume object should not be able to delete +itself, you disagree with that decision. Let's subclass +VM::EC2::Volume to add a \fIdelete()\fR method. +.PP +First subclass the VM::EC2::Volume class: +.PP +.Vb 2 +\& package MyVolume; +\& use base \*(AqVM::EC2::Volume\*(Aq; +\& +\& sub delete { +\& my $self = shift; +\& $self\->ec2\->delete_volume($self); +\& } +.Ve +.PP +Now subclass \s-1VM::EC2\s0 to add the appropriate overrides to the \fInew()\fR method: +.PP +.Vb 2 +\& package MyEC2; +\& use base \*(AqVM::EC2\*(Aq; +\& +\& sub new { +\& my $class = shift; +\& VM::EC2::Dispatch\->add_override(CreateVolume =>\*(AqMyVolume\*(Aq); +\& VM::EC2::Dispatch\->add_override(DescribeVolumes=>\*(Aqfetch_items,volumeSet,MyVolume\*(Aq); +\& return $class\->SUPER::new(@_); +\& } +.Ve +.PP +Now we can test it out: +.PP +.Vb 4 +\& use MyEC2; +\& # find all volumes that are "available" and not in\-use +\& my @vol = $ec2\->describe_volumes({status=>\*(Aqavailable\*(Aq}); +\& for my $vol (@vol) { $vol\->delete && print "$vol deleted\en" } +.Ve +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Object +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +VM::EC2::BlockDevice::Mapping +VM::EC2::BlockDevice::Mapping::EBS +VM::EC2::Error +VM::EC2::Generic +VM::EC2::Group +VM::EC2::Image +VM::EC2::Instance +VM::EC2::Instance::ConsoleOutput +VM::EC2::Instance::Set +VM::EC2::Instance::State +VM::EC2::Instance::State::Change +VM::EC2::Instance::State::Reason +VM::EC2::Region +VM::EC2::ReservationSet +VM::EC2::SecurityGroup +VM::EC2::Snapshot +VM::EC2::Tag +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::ElasticAddress.3pm b/perl/man/man3/VM::EC2::ElasticAddress.3pm new file mode 100644 index 0000000..3bb2fd0 --- /dev/null +++ b/perl/man/man3/VM::EC2::ElasticAddress.3pm @@ -0,0 +1,201 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::ElasticAddress 3pm" +.TH VM::EC2::ElasticAddress 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::ElasticAddress \- Object describing an Amazon EC2 Elastic Address +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $addr = $ec2\->allocate_address; +\& +\& $ip = $addr\->publicIp; +\& $domain = $addr\->domain; +\& $allId = $addr\->allocationId; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 elastic address and is returned by +by \s-1VM::EC2\-\s0>\fIallocate_address()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 7 +\& publicIp \-\- Public IP of the address +\& domain \-\- Type of address, either "standard" or "vpc" +\& allocationId \-\- For VPC addresses only, an allocation ID +\& instanceId \-\- If the address is associated with an instance, the +\& ID of that instance. +\& associationId \-\- If the address is a VPC elastic IP, and associated +\& with an instance, then the ID of the association. +.Ve +.PP +In addition, the following convenience methods are provided: +.ie n .SS "$result = $addr\->associate($instance_id)" +.el .SS "\f(CW$result\fP = \f(CW$addr\fP\->associate($instance_id)" +.IX Subsection "$result = $addr->associate($instance_id)" +Associate this address with the given instance \s-1ID\s0 or +VM::EC2::Instance object. If successful, the result code will be +true for an ordinary \s-1EC2\s0 Elastic \s-1IP\s0,or equal to the associationId for +a \s-1VPC\s0 Elastic \s-1IP\s0 address. +.ie n .SS "$result = $addr\->\fIdisassociate()\fP" +.el .SS "\f(CW$result\fP = \f(CW$addr\fP\->\fIdisassociate()\fP" +.IX Subsection "$result = $addr->disassociate()" +Disassociate this address with any instance it is already associated +with. If successful, this method will return true. +.ie n .SS "$addr\->\fIrefresh()\fP" +.el .SS "\f(CW$addr\fP\->\fIrefresh()\fP" +.IX Subsection "$addr->refresh()" +This is an internal function called after \fIassociate()\fR and +\&\fIdisassociate()\fR, and is used to refresh the address object's contents. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +publicIp. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Error.3pm b/perl/man/man3/VM::EC2::Error.3pm new file mode 100644 index 0000000..5a45814 --- /dev/null +++ b/perl/man/man3/VM::EC2::Error.3pm @@ -0,0 +1,180 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Error 3pm" +.TH VM::EC2::Error 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Error \- Object describing an error emitted by the Amazon API +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instance(\-instance_id=>\*(Aqinvalid\-name\*(Aq); +\& die $ec2\->error if $ec2\->is_error; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an error emitted by the Amazon \s-1API\s0. \s-1VM::EC2\s0 +method calls may return undef under either of two conditions: the +request may simply have no results that satisfy it (for example, +asking to describe an instance whose \s-1ID\s0 does not exist), or an error +occurred due to invalid parameters or communication problems. +.PP +As described in \s-1VM::EC2\s0, the \s-1VM::EC2\-\s0>is_error method returns true if +the last method call resulted in an error, and \s-1VM::EC2\-\s0>error returns +the content of the error message. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 2 +\& message \-\- the error message +\& code \-\- the error code +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the code +and message into a single string in the format \*(L"Message [Code]\*(R". +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Generic.3pm b/perl/man/man3/VM::EC2::Generic.3pm new file mode 100644 index 0000000..57b303b --- /dev/null +++ b/perl/man/man3/VM::EC2::Generic.3pm @@ -0,0 +1,377 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Generic 3pm" +.TH VM::EC2::Generic 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Generic \- Base class for VM::EC2 objects +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& my $ec2 = VM::EC2\->new(\-access_key => \*(Aqaccess key id\*(Aq, +\& \-secret_key => \*(Aqaws_secret_key\*(Aq, +\& \-endpoint => \*(Aqhttp://ec2.amazonaws.com\*(Aq); +\& +\& my $object = $ec2\->some_method(...); +\& +\& # getting data fields +\& my @field_names = $object\->fields; +\& +\& # invoking data fields as methods +\& my $request_id = $object\->requestId; +\& my $xmlns = $object\->xmlns; +\& +\& # tagging +\& my $tags = $object\->tags; +\& +\& if ($tags\->{Role} eq \*(AqWebServer\*(Aq) { +\& $object\->delete_tags(Role=>undef); +\& $object\->add_tags(Role => \*(AqWeb Server\*(Aq, +\& Status => \*(Aqdevelopment\*(Aq); +\& } +\& +\& # get the parsed XML object as a hash +\& my $hashref = $object\->payload; +\& +\& # get the parsed XML object as a Data::Dumper string +\& my $text = $object\->as_string; +\& +\& # get the VM::EC2 object back +\& my $ec2 = $object\->ec2; +\& +\& # get the most recent error string +\& warn $object\->error_str; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This is a common base class for objects returned from \s-1VM::EC2\s0. It +provides a number of generic methods that are used in subclasses, but +is not intended to be used directly. +.SH "METHODS" +.IX Header "METHODS" +.ie n .SS "$object = VM::EC2::Generic\->new($payload,$ec2 [,$xmlns, $requestId])" +.el .SS "\f(CW$object\fP = VM::EC2::Generic\->new($payload,$ec2 [,$xmlns, \f(CW$requestId\fP])" +.IX Subsection "$object = VM::EC2::Generic->new($payload,$ec2 [,$xmlns, $requestId])" +Given the parsed \s-1XML\s0 generated by VM::EC2::Dispatch and the \s-1VM::EC2\s0 +object, return a new object. Two optional additional arguments provide +the seldom-needed \s-1XML\s0 namespace and \s-1ID\s0 of the request that generated +this object. +.ie n .SS "$ec2 = $object\->ec2" +.el .SS "\f(CW$ec2\fP = \f(CW$object\fP\->ec2" +.IX Subsection "$ec2 = $object->ec2" +.ie n .SS "$ec2 = $object\->aws" +.el .SS "\f(CW$ec2\fP = \f(CW$object\fP\->aws" +.IX Subsection "$ec2 = $object->aws" +Return the \s-1VM::EC2\s0 object that generated this object. This method can +be called as either \fIec2()\fR (preferred) or \fIaws()\fR (deprecated). +.ie n .SS "$id = $object\->primary_id (optional method)" +.el .SS "\f(CW$id\fP = \f(CW$object\fP\->primary_id (optional method)" +.IX Subsection "$id = $object->primary_id (optional method)" +Resources that have unique Amazon identifiers, such as images, +instances and volumes, implement the \fIprimary_id()\fR method to return +that identifier. Resources that do not have unique identifiers, will +throw an exception if this method is called. This method is in +addition to the resource-specific \s-1ID\s0. For example, volumes have a +unique \s-1ID\s0, and this \s-1ID\s0 can be fetched with either of: +.PP +.Vb 1 +\& $vol\->volumeId; +.Ve +.PP +or +.PP +.Vb 1 +\& $vol\->primary_id; +.Ve +.ie n .SS "$xmlns = $object\->xmlns" +.el .SS "\f(CW$xmlns\fP = \f(CW$object\fP\->xmlns" +.IX Subsection "$xmlns = $object->xmlns" +Return the \s-1XML\s0 namespace of the request that generated this object, if +any. All objects generated by direct requests on the \s-1VM::EC2\s0 object +will return this field, but objects returned via methods calls on +these objects (objects once removed) may not. +.ie n .SS "$id = $object\->requestId" +.el .SS "\f(CW$id\fP = \f(CW$object\fP\->requestId" +.IX Subsection "$id = $object->requestId" +Return the \s-1ID\s0 of the reuqest that generated this object, if any. All +objects generated by direct requests on the \s-1VM::EC2\s0 object will return +this field, but objects returned via methods calls on these objects +(objects once removed) may not. +.ie n .SS "$name = $object\->short_name" +.el .SS "\f(CW$name\fP = \f(CW$object\fP\->short_name" +.IX Subsection "$name = $object->short_name" +Return a short name for this object for use in string +interpolation. If the object has a \fIprimary_id()\fR method, then this +returns that \s-1ID\s0. Otherwise it returns the default Perl object name +(VM::EC2::Generic=HASH(0x99f3850). Some classes override \fIshort_name()\fR +in order to customized information about the object. See for example +VM::EC2::SecurityGroup::IpPermission. +.ie n .SS "$hashref = $object\->payload" +.el .SS "\f(CW$hashref\fP = \f(CW$object\fP\->payload" +.IX Subsection "$hashref = $object->payload" +Return the parsed \s-1XML\s0 hashref that underlies this object. See +VM::EC2::Dispatch. +.ie n .SS "@fields = $object\->fields" +.el .SS "\f(CW@fields\fP = \f(CW$object\fP\->fields" +.IX Subsection "@fields = $object->fields" +Return the data field names that are valid for an object of this +type. These field names correspond to tags in the \s-1XML\s0 +returned from Amazon and can then be used as method calls. +.PP +Internally, this method is called \fIvalid_fields()\fR +.ie n .SS "$text = $object\->as_string" +.el .SS "\f(CW$text\fP = \f(CW$object\fP\->as_string" +.IX Subsection "$text = $object->as_string" +Return a Data::Dumper representation of the contents of this object's +payload. +.ie n .SS "$hashref = $object\->tags =head2 $hashref = $object\->tagSet" +.el .SS "\f(CW$hashref\fP = \f(CW$object\fP\->tags =head2 \f(CW$hashref\fP = \f(CW$object\fP\->tagSet" +.IX Subsection "$hashref = $object->tags =head2 $hashref = $object->tagSet" +Return the metadata tags assigned to this resource, if any, as a +hashref. Both \fItags()\fR and \fItagSet()\fR work identically. +.ie n .SS "$boolean = $object\->add_tags(Tag1=>'value1',Tag2=>'value2',...)" +.el .SS "\f(CW$boolean\fP = \f(CW$object\fP\->add_tags(Tag1=>'value1',Tag2=>'value2',...)" +.IX Subsection "$boolean = $object->add_tags(Tag1=>'value1',Tag2=>'value2',...)" +.ie n .SS "$boolean = $object\->add_tags(\e%hash)" +.el .SS "\f(CW$boolean\fP = \f(CW$object\fP\->add_tags(\e%hash)" +.IX Subsection "$boolean = $object->add_tags(%hash)" +Add one or more tags to the object. You may provide either a list of +tag/value pairs or a hashref. If no tag of the indicated name exsists +it will be created. If there is already a tag by this name, it will +be set to the provided value. The result code is true if the Amazon +resource was successfully updated. +.PP +Also see \s-1VM::EC2\-\s0>\fIadd_tags()\fR for a way of tagging multiple resources +simultaneously. +.PP +The alias \fIadd_tag()\fR is also provided as a convenience. +.ie n .SS "$boolean = $object\->delete_tags(@args)" +.el .SS "\f(CW$boolean\fP = \f(CW$object\fP\->delete_tags(@args)" +.IX Subsection "$boolean = $object->delete_tags(@args)" +Delete the indicated tags from the indicated resource. There are +several variants you may use: +.PP +.Vb 2 +\& # delete Foo tag if it has value "bar" and Buzz tag if it has value \*(Aqbazz\*(Aq +\& $i\->delete_tags({Foo=>\*(Aqbar\*(Aq,Buzz=>\*(Aqbazz\*(Aq}) +\& +\& # same as above but using a list rather than a hashref +\& $i\->delete_tags(Foo=>\*(Aqbar\*(Aq,Buzz=>\*(Aqbazz\*(Aq) +\& +\& # delete Foo tag if it has any value, Buzz if it has value \*(Aqbazz\*(Aq +\& $i\->delete_tags({Foo=>undef,Buzz=>\*(Aqbazz\*(Aq}) +\& +\& # delete Foo and Buzz tags unconditionally +\& $i\->delete_tags([\*(AqFoo\*(Aq,\*(AqBuzz\*(Aq]) +\& +\& # delete Foo tag unconditionally +\& $i\->delete_tags(\*(AqFoo\*(Aq); +.Ve +.PP +Also see \s-1VM::EC2\-\s0>\fIdelete_tags()\fR for a way of deleting tags from multiple +resources simultaneously. +.ie n .SS "$xml = $object\->as_xml" +.el .SS "\f(CW$xml\fP = \f(CW$object\fP\->as_xml" +.IX Subsection "$xml = $object->as_xml" +Returns an \s-1XML\s0 version of the object. The object will already been +parsed by XML::Simple at this point, and so the data returned by this +method will not be identical to the \s-1XML\s0 returned by \s-1AWS\s0. +.ie n .SS "$value = $object\->attribute('tag_name')" +.el .SS "\f(CW$value\fP = \f(CW$object\fP\->attribute('tag_name')" +.IX Subsection "$value = $object->attribute('tag_name')" +Returns the value of a tag in the \s-1XML\s0 returned from \s-1AWS\s0, using a +simple heuristic. If the requested tag has a nested tag named +it will return the contents of . If the tag has one or more +nested tags named , it will return a list of hashrefs located +within the tag. Otherwise it will return the contents of +. +.ie n .SS "$string = $object\->error_str" +.el .SS "\f(CW$string\fP = \f(CW$object\fP\->error_str" +.IX Subsection "$string = $object->error_str" +Returns the error string for the last operation, if any, as reported +by \s-1VM::EC2\s0. +.ie n .SS "$string = $object\->error" +.el .SS "\f(CW$string\fP = \f(CW$object\fP\->error" +.IX Subsection "$string = $object->error" +Returns the VM::EC2::Error object from the last operation, if any, +as reported by \s-1VM::EC2\s0. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +This base class and its subclasses use string overloading so that the +object looks and acts like a simple string when used in a string +context (such as when printed or combined with other +strings). Typically the string corresponds to the Amazon resource \s-1ID\s0 +such as \*(L"ami\-12345\*(R" and is generated by the \fIshort_name()\fR method. +.PP +You can sort and compare the objects as if they were strings, but +despite this, object method calls work in the usual way. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Dispatch +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +VM::EC2::BlockDevice::Mapping +VM::EC2::BlockDevice::Mapping::EBS +VM::EC2::ConsoleOutput +VM::EC2::Error +VM::EC2::Generic +VM::EC2::Group +VM::EC2::Image +VM::EC2::Instance +VM::EC2::Instance::Set +VM::EC2::Instance::State +VM::EC2::Instance::State::Change +VM::EC2::Instance::State::Reason +VM::EC2::Region +VM::EC2::ReservationSet +VM::EC2::SecurityGroup +VM::EC2::Snapshot +VM::EC2::Tag +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. +.SH "POD ERRORS" +.IX Header "POD ERRORS" +Hey! \fBThe above document had some coding errors, which are explained below:\fR +.IP "Around line 160:" 4 +.IX Item "Around line 160:" +=back without =over diff --git a/perl/man/man3/VM::EC2::Group.3pm b/perl/man/man3/VM::EC2::Group.3pm new file mode 100644 index 0000000..dbb47c1 --- /dev/null +++ b/perl/man/man3/VM::EC2::Group.3pm @@ -0,0 +1,195 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Group 3pm" +.TH VM::EC2::Group 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Group \- Object describing an Amazon EC2 security group name +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-12345\*(Aq); +\& my @groups = $instance\->groups; +\& for my $g (@groups) { +\& my $id = $g\->groupId; +\& my $name = $g\->groupName; +\& +\& # get the security group details +\& my $sg = $ec2\->describe_security_group($g); +\& my $permissions = $sg\->ipPermissions; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the name and \s-1ID\s0 of a security group. It is +returned by an instance's \fIgroups()\fR method. This object does not +provide any of the details about the security group, but you can use +it in a call to \s-1VM::EC2\-\s0>\fIdescribe_security_group()\fR to get details about +the security group's allowed ports, etc. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 2 +\& groupId \-\- the group ID +\& groupName \-\- the group\*(Aqs name +.Ve +.PP +For convenience, the object also provides a \fIpermissions()\fR method that +will return the fully detailed VM::EC2::SecurityGroup: +.PP +.Vb 1 +\& $details = $group\->permissions() +.Ve +.PP +See VM::EC2::SecurityGroup +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +groupId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Object +VM::EC2::Generic +VM::EC2::SecurityGroup +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Image.3pm b/perl/man/man3/VM::EC2::Image.3pm new file mode 100644 index 0000000..5fa5c93 --- /dev/null +++ b/perl/man/man3/VM::EC2::Image.3pm @@ -0,0 +1,347 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Image 3pm" +.TH VM::EC2::Image 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Image \- Object describing an Amazon Machine Image (AMI) +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $image = $ec2\->describe_images(\-image_id=>\*(Aqami\-12345\*(Aq); +\& +\& $state = $image\->imageState; +\& $owner = $image\->imageOwnerId; +\& $rootdev = $image\->rootDeviceName; +\& @devices = $image\->blockDeviceMapping; +\& $tags = $image\->tags; +\& +\& @instances = $image\->run_instances(\-min_count=>10); +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon Machine Image (\s-1AMI\s0), and is returned +by \s-1VM::EC2\-\s0>\fIdescribe_images()\fR. In addition to methods to query the +image's attributes, the \fIrun_instances()\fR method allows you to launch +and configure \s-1EC2\s0 instances based on the \s-1AMI\s0. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 10 +\& imageId \-\- AMI ID +\& imageLocation \-\- Location of the AMI +\& imageState \-\- Current state of the AMI. One of "available", +\& "pending" or "failed". Only "available" AMIs +\& can be launched. +\& imageOwnerId \-\- AWS account ID of the image owner. +\& isPublic \-\- Returns true if this image has public launch +\& permissions. Note that this is a Perl boolean, +\& and not the string "true". +\& productCodes \-\- A list of product codes associated with the image. +\& architecture \-\- The architecture of the image. +\& imageType \-\- The image type (machine, kernel or RAM disk). +\& kernelId \-\- The kernel associated with the image. +\& ramdiskId \-\- The RAM disk associated with the image. +\& platform \-\- "Windows" for Windows AMIs, otherwise undef. +\& stateReason \-\- Explanation of a "failed" imageState. This is +\& a VM::EC2::Instance::State::Reason +\& object. +\& imageOwnerAlias \-The AWS account alias (e.g. "self") or AWS +\& account ID that owns the AMI. +\& name \-\- Name of the AMI provided during image creation. +\& description \-\- Description of the AMI provided during image +\& creation. +\& rootDeviceType \-\- The root device type. One of "ebs" or +\& "instance\-store". +\& rootDeviceMape \-\- Name of the root device, e.g. "/dev/sda1" +\& blockDeviceMapping \-\- List of block devices attached to this +\& image. Each element is a +\& VM::EC2::BlockDevice. +\& virtualizationType \-\- One of "paravirtual" or "hvm". +\& hypervisor \-\- One of "ovm" or "xen" +.Ve +.PP +In addition, the object supports the \fItags()\fR method described in +VM::EC2::Generic: +.PP +.Vb 1 +\& print "ready for production\en" if $image\->tags\->{Released}; +.Ve +.ie n .SS "@instances = $image\->run_instances(%args)" +.el .SS "\f(CW@instances\fP = \f(CW$image\fP\->run_instances(%args)" +.IX Subsection "@instances = $image->run_instances(%args)" +The \fIrun_instance()\fR method will launch one or more instances based on +this \s-1AMI\s0. The method takes all the arguments recognized by +\&\s-1VM::EC2\-\s0>\fIrun_instances()\fR, except for the \-image_id argument. The +method returns a list of VM::EC2::Instance objects, which you may +monitor periodically until they are up and running. +.PP +All arguments are optional. See \fIrun_instances()\fR in \s-1VM::EC2\s0 for +more information. +.PP +.Vb 10 +\& \-min_count Minimum number of instances to launch [1] +\& \-max_count Maximum number of instances to launch [1] +\& \-key_name Name of the keypair to use +\& \-security_group_id Security group ID to use for this instance. +\& Use an arrayref for multiple group IDs +\& \-security_group Security group name to use for this instance. +\& Use an arrayref for multiple values. +\& \-user_data User data to pass to the instances. Do NOT base64 +\& encode this. It will be done for you. +\& \-instance_type Type of the instance to use. See below for a +\& list. +\& \-placement_zone The availability zone you want to launch the +\& instance into. Call $ec2\->regions for a list. +\& \-placement_group An existing placement group to launch the +\& instance into. Applicable to cluster instances +\& only. +\& \-placement_tenancy Specify \*(Aqdedicated\*(Aq to launch the instance on a +\& dedicated server. Only applicable for VPC +\& instances. +\& \-kernel_id ID of the kernel to use for the instances, +\& overriding the kernel specified in the image. +\& \-ramdisk_id ID of the ramdisk to use for the instances, +\& overriding the ramdisk specified in the image. +\& \-block_devices Specify block devices to map onto the instances, +\& overriding the values specified in the image. +\& This can be a scalar string or an arrayref for +\& multiple mappings: +\& Example: +\& [\*(Aq/dev/sdb=ephemeral0\*(Aq,\*(Aq/dev/sdc=snap\-12345:80:false\*(Aq] +\& \-monitoring Pass a true value to enable detailed monitoring. +\& \-subnet_id ID of the subnet to launch the instance +\& into. Only applicable for VPC instances. +\& \-termination_protection Pass true to lock the instance so that it +\& cannot be terminated using the API. Use +\& modify_instance() to unset this if youu wish to +\& terminate the instance later. +\& \-disable_api_termination \-\- Same as above. +\& \-shutdown_behavior Pass "stop" (the default) to stop the instance +\& and save its disk state when "shutdown" is called +\& from within the instance. Stopped instances can +\& be restarted later. Pass "terminate" to +\& instead terminate the instance and discard its +\& state completely. +\& \-instance_initiated_shutdown_behavior \-\- Same as above. +\& \-private_ip_address Assign the instance to a specific IP address +\& from a VPC subnet (VPC only). +\& \-client_token Unique identifier that you can provide to ensure +\& idempotency of the request. You can use +\& $ec2\->token() to generate a suitable identifier. +\& See http://docs.amazonwebservices.com/AWSEC2/ +\& latest/UserGuide/Run_Instance_Idempotency.html +.Ve +.PP +Note that after launching an instance, you may need to wait a few +seconds before adding tags to it or performing other operations. +.PP +See \s-1VM::EC2\s0 for details. +.ie n .SS "$boolean = $image\->make_public($public)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->make_public($public)" +.IX Subsection "$boolean = $image->make_public($public)" +Change the isPublic flag. Provide a true value to make the image +public, a false one to make it private. +.ie n .SS "$state = $image\->current_status" +.el .SS "\f(CW$state\fP = \f(CW$image\fP\->current_status" +.IX Subsection "$state = $image->current_status" +Refreshes the object and then calls \fIimageState()\fR to return one of +\&\*(L"pending\*(R", \*(L"available\*(R" or \*(L"failed.\*(R" You can use this to monitor an +image_creation process in progress. +.ie n .SS "@user_ids = $image\->launchPermissions" +.el .SS "\f(CW@user_ids\fP = \f(CW$image\fP\->launchPermissions" +.IX Subsection "@user_ids = $image->launchPermissions" +Returns a list of user IDs with launch permission for this +image. Note that the \s-1AWS\s0 \s-1API\s0 calls this +\&\*(L"launchPermission\*(R", but this module makes it plural to emphasize that +the result is a list. +.ie n .SS "@user_ids = $image\->authorized_users" +.el .SS "\f(CW@user_ids\fP = \f(CW$image\fP\->authorized_users" +.IX Subsection "@user_ids = $image->authorized_users" +The same as launchPermissions. +.ie n .SS "$boolean = $image\->add_authorized_users($id1,$id2,...)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->add_authorized_users($id1,$id2,...)" +.IX Subsection "$boolean = $image->add_authorized_users($id1,$id2,...)" +.ie n .SS "$boolean = $image\->remove_authorized_users($id1,$id2,...)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->remove_authorized_users($id1,$id2,...)" +.IX Subsection "$boolean = $image->remove_authorized_users($id1,$id2,...)" +These methods add and remove user accounts which have launch +permissions for the image. The result code indicates whether the list +of user IDs were successfully added or removed. +.ie n .SS "$boolean = $image\->add_authorized_users($id1,$id2,...)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->add_authorized_users($id1,$id2,...)" +.IX Subsection "$boolean = $image->add_authorized_users($id1,$id2,...)" +.ie n .SS "$boolean = $image\->remove_authorized_users($id1,$id2,...)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->remove_authorized_users($id1,$id2,...)" +.IX Subsection "$boolean = $image->remove_authorized_users($id1,$id2,...)" +.ie n .SS "$boolean = $image\->reset_authorized_users" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->reset_authorized_users" +.IX Subsection "$boolean = $image->reset_authorized_users" +These methods add and remove user accounts which have launch +permissions for the image. The result code indicates whether the list +of user IDs were successfully added or removed. +.PP +\&\fIreset_authorized_users()\fR resets the list users authored to launch +instances from this image to empty, effectively granting launch +privileges to the owner only. +.PP +See also \fIauthorized_users()\fR. +.ie n .SS "$image\->refresh" +.el .SS "\f(CW$image\fP\->refresh" +.IX Subsection "$image->refresh" +This method will refresh the object from \s-1AWS\s0, updating all values to +their current ones. You can call it after tagging or otherwise +changing image attributes. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +imageId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::StateReason +VM::EC2::Instance +VM::EC2::Tag +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Image::LaunchPermission.3pm b/perl/man/man3/VM::EC2::Image::LaunchPermission.3pm new file mode 100644 index 0000000..30af0fd --- /dev/null +++ b/perl/man/man3/VM::EC2::Image::LaunchPermission.3pm @@ -0,0 +1,179 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Image::LaunchPermission 3pm" +.TH VM::EC2::Image::LaunchPermission 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Region \- Object describing AMI launch permissions +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $image = $ec2\->describe_images(\*(Aqami\-12345\*(Aq); +\& @users = $image\->launchPermissions; +\& for (@users) { +\& $group = $_\->group; +\& $user = $_\->userId; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon machine image launch permission, and +is return by VM::EC2::Image \fIlaunchPermissions()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 3 +\& group \-\- Name of a group with launch permissions. Only +\& valid value is "all" +\& userId \-\- Name of a user with launch permissions. +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +userId. If the userId is blank, then interpolates as the group. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Image +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance.3pm b/perl/man/man3/VM::EC2::Instance.3pm new file mode 100644 index 0000000..d5fa4a4 --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance.3pm @@ -0,0 +1,531 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance 3pm" +.TH VM::EC2::Instance 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Instance \- Object describing an Amazon EC2 instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-12345\*(Aq); +\& +\& $instanceId = $instance\->instanceId; +\& $ownerId = $instance\->ownerId; +\& $reservationId = $instance\->reservationId; +\& $imageId = $instance\->imageId; +\& $state = $instance\->instanceState; +\& @groups = $instance\->groups; +\& $private_ip = $instance\->privateIpAddress; +\& $public_ip = $instance\->ipAddress; +\& $private_dns = $instance\->privateDnsName; +\& $public_dns = $instance\->dnsName; +\& $time = $instance\->launchTime; +\& $status = $instance\->current_status; +\& $tags = $instance\->tags; +\& +\& $stateChange = $instance\->start(); +\& $stateChange = $instance\->stop(); +\& $stateChange = $instance\->reboot(); +\& $stateChange = $instance\->terminate(); +\& +\& $seconds = $instance\->up_time; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 instance, and is returned by +\&\s-1VM::EC2\-\s0>\fIdescribe_instances()\fR. In addition to methods to query the +instance's attributes, there are methods that allow you to manage the +instance's lifecycle, including start, stopping, and terminating it. +.PP +Note that the information about security groups and reservations that +is returned by \fIdescribe_instances()\fR is copied into each instance +before returning it, so there is no concept of a \*(L"reservation set\*(R" in +this interface. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 1 +\& instanceId \-\- ID of this instance. +\& +\& imageId \-\- ID of the image used to launch this instance. +\& +\& instanceState \-\- The current state of the instance at the time +\& that describe_instances() was called, as a +\& VM::EC2::Instance::State object. Also +\& see the status() method, which re\-queries EC2 for +\& the current state of the instance. +\& +\& privateDnsName \-\- The private DNS name assigned to the instance within +\& Amazon\*(Aqs EC2 network. This element is defined only +\& for running instances. +\& +\& dnsName \-\- The public DNS name assigned to the instance, defined +\& only for running instances. +\& +\& reason \-\- Reason for the most recent state transition, +\& if applicable. +\& +\& keyName \-\- Name of the associated key pair, if applicable. +\& +\& keyPair \-\- The VM::EC2::KeyPair object, derived from the keyName +\& +\& amiLaunchIndex \-\- The AMI launch index, which can be used to find +\& this instance within the launch group. +\& +\& productCodes \-\- A list of product codes that apply to this instance. +\& +\& instanceType \-\- The instance type, such as "t1.micro". CHANGEABLE. +\& +\& launchTime \-\- The time the instance launched. +\& +\& placement \-\- The placement of the instance. Returns a +\& VM::EC2::Instance::Placement object, which when used +\& as a string is equal to the instance\*(Aqs +\& availability zone. +\& +\& kernelId \-\- ID of the instance\*(Aqs kernel. CHANGEABLE. +\& +\& ramdiskId \-\- ID of the instance\*(Aqs RAM disk. CHANGEABLE. +\& +\& platform \-\- Platform of the instance, either "windows" or empty. +\& +\& monitoring \-\- State of monitoring for the instance. One of +\& "disabled", "enabled", or "pending". CHANGEABLE: +\& pass true or "enabled" to turn on monitoring. Pass +\& false or "disabled" to turn it off. +\& +\& subnetId \-\- The Amazon VPC subnet ID in which the instance is +\& running, for Virtual Private Cloud instances only. +\& +\& vpcId \-\- The Virtual Private Cloud ID for VPC instances. +\& +\& privateIpAddress \-\- The private (internal Amazon) IP address assigned +\& to the instance. +\& +\& ipAddress \-\- The public IP address of the instance. +\& +\& sourceDestCheck \-\- Whether source destination checking is enabled on +\& this instance. This returns a Perl boolean rather than +\& the string "true". This method is used in conjunction +\& with VPC NAT functionality. See the Amazon VPC User +\& Guide for details. CHANGEABLE. +\& +\& groupSet \-\- List of VM::EC2::Group objects indicating the VPC +\& security groups in which this instance resides. Not to be +\& confused with groups(), which returns the security groups +\& of non\-VPC instances. +\& +\& stateReason \-\- A VM::EC2::Instance::State::Reason object which +\& indicates the reason for the instance\*(Aqs most recent +\& state change. See http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/ApiReference\-ItemType\-StateReasonType.html +\& +\& architecture \-\- The architecture of the image. Either "i386" or "x86_64". +\& +\& rootDeviceType \-\- The type of the root device used by the instance. One of "ebs" +\& or "instance\-store". +\& +\& rootDeviceName \-\- The name of the the device used by the instance, such as /dev/sda1. +\& CHANGEABLE. +\& +\& blockDeviceMapping \-\- The block device mappings for the instance, represented +\& as a list of L objects. +\& +\& instanceLifeCycle\-\- "spot" if this instance is a spot instance, otherwise empty. +\& +\& spotInstanceRequestId \-\- The ID of the spot instance request, if applicable. +\& +\& virtualizationType \-\- Either "paravirtual" or "hvm". +\& +\& clientToken \-\- The idempotency token provided at the time of the AMI launch, +\& if any. +\& +\& hypervisor \-\- The instance\*(Aqs hypervisor type, either "ovm" or "xen". +\& +\& userData \-\- User data passed to instance at launch. CHANGEABLE. +\& +\& disableApiTermination \-\- True if the instance is protected from termination +\& via the console or command\-line APIs. CHANGEABLE. +\& +\& instanceInitiatedShutdownBehavior \-\- Action to take when the instance calls +\& shutdown or halt. One of "stop" or "terminate". CHANGEABLE. +\& +\& tagSet \-\- Tags for the instance as a hashref. CHANGEABLE via add_tags() +\& and delete_tags(). +.Ve +.PP +The object also supports the \fItags()\fR method described in +VM::EC2::Generic: +.PP +.Vb 1 +\& print "ready for production\en" if $image\->tags\->{Released}; +.Ve +.PP +All methods return read-only values except for those marked \s-1CHANGEABLE\s0 +in the list above. For these, you can change the instance attribute on +stopped instances by invoking the method with an appropriate new +value. For example, to change the instance type from \*(L"t1.micro\*(R" to +\&\*(L"m1.small\*(R", you can do this: +.PP +.Vb 5 +\& my @tiny_instances = $ec2\->describe_instances(\-filter=>{\*(Aqinstance\-type\*(Aq=>\*(Aqt1.micro\*(Aq}); +\& for my $i (@tiny_instances) { +\& next unless $i\->instanceState eq \*(Aqstopped\*(Aq; +\& $i\->instanceType(\*(Aqm1.small\*(Aq) or die $ec2\->error; +\& } +.Ve +.PP +When you attempt to change an attribute of an instance, the method +will return true on success, false on failure. On failure, the +detailed error messages can be recovered from the \s-1VM::EC2\s0 object's +\&\fIerror()\fR method. +.SH "LIFECYCLE METHODS" +.IX Header "LIFECYCLE METHODS" +In addition, the following convenience functions are provided +.ie n .SS "$state = $instance\->current_status" +.el .SS "\f(CW$state\fP = \f(CW$instance\fP\->current_status" +.IX Subsection "$state = $instance->current_status" +This method queries \s-1AWS\s0 for the instance's current state and returns +it as a VM::EC2::Instance::State object. This enables you to +poll the instance until it is in the desired state: +.PP +.Vb 1 +\& while ($instance\->current_status eq \*(Aqpending\*(Aq) { sleep 5 } +.Ve +.ie n .SS "$state = $instance\->current_state" +.el .SS "\f(CW$state\fP = \f(CW$instance\fP\->current_state" +.IX Subsection "$state = $instance->current_state" +An alias for \fIcurrent_status()\fR. +.ie n .SS "$state_change = $instance\->start([$wait])" +.el .SS "\f(CW$state_change\fP = \f(CW$instance\fP\->start([$wait])" +.IX Subsection "$state_change = $instance->start([$wait])" +This method will start the current instance and returns a +VM::EC2::Instance::State::Change object that can be used to +monitor the status of the instance. By default the method returns +immediately, but you can pass a true value as an argument in order to +pause execution until the instance is in the \*(L"running\*(R" state. +.PP +Here's a polling example: +.PP +.Vb 2 +\& $state = $instance\->start; +\& while ($state\->status eq \*(Aqpending\*(Aq) { sleep 5 } +.Ve +.PP +Here's an example that will pause until the instance is running: +.PP +.Vb 1 +\& $instance\->start(1); +.Ve +.PP +Attempting to start an already running instance, or one that is +in transition, will throw a fatal error. +.ie n .SS "$state_change = $instance\->stop([$wait])" +.el .SS "\f(CW$state_change\fP = \f(CW$instance\fP\->stop([$wait])" +.IX Subsection "$state_change = $instance->stop([$wait])" +This method is similar to \fIstart()\fR, except that it can be used to +stop a running instance. +.ie n .SS "$state_change = $instance\->terminate([$wait])" +.el .SS "\f(CW$state_change\fP = \f(CW$instance\fP\->terminate([$wait])" +.IX Subsection "$state_change = $instance->terminate([$wait])" +This method is similar to \fIstart()\fR, except that it can be used to +terminate an instance. It can only be called on instances that +are either \*(L"running\*(R" or \*(L"stopped\*(R". +.ie n .SS "$state_change = $instance\->\fIreboot()\fP" +.el .SS "\f(CW$state_change\fP = \f(CW$instance\fP\->\fIreboot()\fP" +.IX Subsection "$state_change = $instance->reboot()" +Reboot the instance. Rebooting doesn't occur immediately; instead the +request is queued by the Amazon system and may be satisfied several +minutes later. For this reason, there is no \*(L"wait\*(R" argument. +.ie n .SS "$seconds = $instance\->\fIup_time()\fP" +.el .SS "\f(CW$seconds\fP = \f(CW$instance\fP\->\fIup_time()\fP" +.IX Subsection "$seconds = $instance->up_time()" +Return the number of seconds since the instance was launched. Note +that this includes time that the instance was either in the \*(L"running\*(R" +or \*(L"stopped\*(R" state. +.ie n .SS "$result = $instance\->associate_address($elastic_address)" +.el .SS "\f(CW$result\fP = \f(CW$instance\fP\->associate_address($elastic_address)" +.IX Subsection "$result = $instance->associate_address($elastic_address)" +Associate an elastic address with this instance. If you are +associating a \s-1VPC\s0 elastic \s-1IP\s0 address with the instance, the result +code will indicate the associationId. Otherwise it will be a simple +perl truth value (\*(L"1\*(R") if successful, undef if false. +.PP +In the case of an ordinary \s-1EC2\s0 Elastic \s-1IP\s0 address, the first argument may +either be an ordinary string (xx.xx.xx.xx format) or a +VM::EC2::ElasticAddress object. However, if it is a \s-1VPC\s0 elastic +\&\s-1IP\s0 address, then the argument must be a VM::EC2::ElasticAddress +as returned by \fIdescribe_addresses()\fR. The reason for this is that the +allocationId must be retrieved from the object in order to use in the +call. +.ie n .SS "$bool = $ec2\->disassociate_address" +.el .SS "\f(CW$bool\fP = \f(CW$ec2\fP\->disassociate_address" +.IX Subsection "$bool = $ec2->disassociate_address" +Disassociate an elastic \s-1IP\s0 address from this instance. if any. The +result will be true if disassociation was successful. Note that for a +short period of time (up to a few minutes) after disassociation, the +instance will have no public \s-1IP\s0 address and will be unreachable from +the internet. +.ie n .SS "$instance\->refresh" +.el .SS "\f(CW$instance\fP\->refresh" +.IX Subsection "$instance->refresh" +This method will refresh the object from \s-1AWS\s0, updating all values to +their current ones. You can call it after starting an instance in +order to get its \s-1IP\s0 address. Note that \fIrefresh()\fR is called +automatically for you if you call \fIstart()\fR, \fIstop()\fR or \fIterminate()\fR with +a true \f(CW$wait\fR argument. +.ie n .SS "$text = $instance\->console_output" +.el .SS "\f(CW$text\fP = \f(CW$instance\fP\->console_output" +.IX Subsection "$text = $instance->console_output" +Return the console output of the instance as a +VM::EC2::ConsoleOutput object. This object can be treated as a +string, or as an object with methods +.SH "CREATING IMAGES" +.IX Header "CREATING IMAGES" +The \fIcreate_image()\fR method provides a handy way of creating and +registering an \s-1AMI\s0 based on the current state of the instance. All +currently-associated block devices will be snapshotted and associated +with the image. +.PP +Note that this operation can take a long time to complete. You may +follow its progress by calling the returned image object's +\&\fIcurrent_status()\fR method. +.ie n .SS "$imageId = $instance\->create_image($name [,$description])" +.el .SS "\f(CW$imageId\fP = \f(CW$instance\fP\->create_image($name [,$description])" +.IX Subsection "$imageId = $instance->create_image($name [,$description])" +.ie n .SS "$imageId = $instance\->create_image(\-name=>$name,\-description=>$description,\-no_reboot=>$boolean)" +.el .SS "\f(CW$imageId\fP = \f(CW$instance\fP\->create_image(\-name=>$name,\-description=>$description,\-no_reboot=>$boolean)" +.IX Subsection "$imageId = $instance->create_image(-name=>$name,-description=>$description,-no_reboot=>$boolean)" +Create an image from this instance and return a VM::EC2::Image object. +The instance must be in the \*(L"stopped\*(R" or \*(L"running\*(R" state. In the +latter case, Amazon will stop the instance, create the image, and then +restart it unless the \-no_reboot argument is provided. +.PP +Arguments: +.PP +.Vb 3 +\& \-name Name for the image that will be created. (required) +\& \-description Description of the new image. +\& \-no_reboot If true, don\*(Aqt reboot the instance. +.Ve +.PP +In the unnamed argument version you can provide the name and +optionally the description of the resulting image. +.SH "VOLUME MANAGEMENT" +.IX Header "VOLUME MANAGEMENT" +.ie n .SS "$attachment = $instance\->attach_volume($volume_id,$device)" +.el .SS "\f(CW$attachment\fP = \f(CW$instance\fP\->attach_volume($volume_id,$device)" +.IX Subsection "$attachment = $instance->attach_volume($volume_id,$device)" +.Vb 1 +\& =head2 $attachment = $instance\->attach_volume(\-volume_id=>$volume_id,\-device=>$device) +.Ve +.PP +Attach volume \f(CW$volume_id\fR to this instance using virtual device +\&\f(CW$device\fR. Both arguments are required. The result is a +VM::EC2::BlockDevice::Attachment object which you can monitor by +calling \fIcurrent_status()\fR: +.PP +.Vb 5 +\& my $a = $instance\->attach_volume(\*(Aqvol\-12345\*(Aq=>\*(Aq/dev/sdg\*(Aq); +\& while ($a\->current_status ne \*(Aqattached\*(Aq) { +\& sleep 2; +\& } +\& print "volume is ready to go\en"; +.Ve +.ie n .SS "$attachment = $instance\->detach_volume($vol_or_device)" +.el .SS "\f(CW$attachment\fP = \f(CW$instance\fP\->detach_volume($vol_or_device)" +.IX Subsection "$attachment = $instance->detach_volume($vol_or_device)" +.ie n .SS "$attachment = $instance\->detach_volume(\-volume_id => $volume_id \-device => $device, \-force => $force);" +.el .SS "\f(CW$attachment\fP = \f(CW$instance\fP\->detach_volume(\-volume_id => \f(CW$volume_id\fP \-device => \f(CW$device\fP, \-force => \f(CW$force\fP);" +.IX Subsection "$attachment = $instance->detach_volume(-volume_id => $volume_id -device => $device, -force => $force);" +Detaches the specified volume. In the single-argument form, you may +provide either a volume or a device name. In the named-argument form, +you may provide both the volume and the device as a check that you are +detaching exactly the volume you think you are. +.PP +Optional arguments: +.PP +.Vb 4 +\& \-volume_id \-\- ID of the instance to detach from. +\& \-device \-\- How the device is exposed to the instance. +\& \-force \-\- Force detachment, even if previous attempts were +\& unsuccessful. +.Ve +.PP +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling \fIcurrent_status()\fR: +.PP +.Vb 5 +\& my $a = $instance\->detach_volume(\*(Aq/dev/sdg\*(Aq); +\& while ($a\->current_status ne \*(Aqdetached\*(Aq) { +\& sleep 2; +\& } +\& print "volume is ready to go\en"; +.Ve +.SH "ACCESSING INSTANCE METADATA" +.IX Header "ACCESSING INSTANCE METADATA" +.ie n .SS "$meta = $instance\->metadata" +.el .SS "\f(CW$meta\fP = \f(CW$instance\fP\->metadata" +.IX Subsection "$meta = $instance->metadata" +\&\fBFor use on running \s-1EC2\s0 instances only:\fR This method returns a +VM::EC2::Instance::Metadata object that will return information about +the currently running instance using the \s-1HTTP://\s0 metadata fields +described at +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?instancedata\-data\-categories.html. This +is usually fastest way to get runtime information on the current +instance. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +instanceId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::Instance::State +VM::EC2::Instance::State::Reason +VM::EC2::Instance::Metadata +VM::EC2::Instance::Placement +VM::EC2::Tag +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::ConsoleOutput.3pm b/perl/man/man3/VM::EC2::Instance::ConsoleOutput.3pm new file mode 100644 index 0000000..3e8e84b --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::ConsoleOutput.3pm @@ -0,0 +1,187 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. 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Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::ConsoleOutput \- Object describing console output from +an Amazon EC2 instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instance(\-instance_id=>\*(Aqi\-123456\*(Aq); +\& +\& my $out = $instance\->console_output; +\& +\& print $out,"\en"; +\& my $ts = $out\->timestamp; +\& my $instance = $out\->instanceId; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the output from the console of a Amazon \s-1EC2\s0 +instance. The instance may be running, pending or stopped. It is +returned by \s-1VM::EC2\-\s0>\fIget_console_output()\fR, as well as +VM::EC2::Instance\->console_output. +.PP +Please see VM::EC2::Generic for methods shared by all \s-1VM::EC2\s0 +objects. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 4 +\& requestId \-\- ID of the request that generated this object +\& instanceId \-\- ID of the instance that generated this output +\& timestamp \-\- Time that this output was generated +\& output \-\- Text of the console output +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will act as if its \fIoutput()\fR +method was called, allowing it to be printed or searched directly. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::Metadata.3pm b/perl/man/man3/VM::EC2::Instance::Metadata.3pm new file mode 100644 index 0000000..70c3658 --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::Metadata.3pm @@ -0,0 +1,355 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::Metadata 3pm" +.TH VM::EC2::Instance::Metadata 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Instance::Metadata \- Object describing the metadata of a running instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& # For use within a running EC2 instance only! +\& +\& use VM::EC2::Instance::Metadata; +\& my $meta = VM::EC2::Instance::Metadata\->new; +\& +\& # alternatively... +\& my $meta = VM::EC2\->instance_metadata; +\& my $meta = $instance\->metadata; +\& +\& # image information +\& $image_id = $meta\->imageId; +\& $index = $meta\->imageLaunchIndex; +\& $path = $meta\->amiManifestPath; +\& $location = $meta\->imageLocation; # same as previous +\& @ancestors = $meta\->ancestorAmiIds; +\& @ancestors = $meta\->imageAncestorIds; # same as previous +\& @codes = $meta\->productCodes; +\& +\& # launch and runtime information +\& $inst_id = $meta\->instanceId; +\& $kern_id = $meta\->kernelId; +\& $rd_id = $meta\->ramdiskId; +\& $res_id = $meta\->reservationId; +\& $type = $meta\->instanceType; +\& $zone = $meta\->availabilityZone; +\& $userdata = $meta\->userData; +\& @groups = $meta\->securityGroups; +\& @keys = $meta\->publicKeys; +\& $block_dev = $meta\->blockDeviceMapping; # a hashref +\& +\& # Network information +\& $priv_name = $meta\->localHostname; +\& $priv_name = $meta\->privateDnsName; # same as previous +\& $priv_ip = $meta\->localIpv4; +\& $priv_ip = $meta\->privateIpAddress; +\& $mac = $meta\->mac; +\& $pub_name = $meta\->publicHostname; +\& $pub_name = $meta\->dnsName; # same as previous +\& $pub_ip = $meta\->publicIpv4; +\& $pub_ip = $meta\->ipAddress; +\& $interfaces= $meta\->interfaces; # a hashref +\& +\& # Undocumented fields +\& $action = $meta\->instanceAction; +\& $profile = $meta\->profile; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This is an interface to the metadata that is provided to a running +instance via the http://169.254.169.254/latest \s-1URL\s0, as described in +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?instancedata\-data\-categories.html. +.PP +Each metadata object caches its values, so there is no overhead in +calling a method repeatedly. Methods return scalar values, lists and +hashrefs as appropriate. +.PP +The methods from this class should only be called within the context +of a running \s-1EC2\s0 instance. Attempts to call outside of this +context will result in long delays as the module attempts to +connect to an invalid hostname. +.SH "METHODS" +.IX Header "METHODS" +.ie n .SS "$meta = VM::EC2::Instance::Metadata\->\fInew()\fP =head2 $meta = $ec2\->\fIinstance_metadata()\fP =head2 $meta = $instance\->\fImetadata()\fP" +.el .SS "\f(CW$meta\fP = VM::EC2::Instance::Metadata\->\fInew()\fP =head2 \f(CW$meta\fP = \f(CW$ec2\fP\->\fIinstance_metadata()\fP =head2 \f(CW$meta\fP = \f(CW$instance\fP\->\fImetadata()\fP" +.IX Subsection "$meta = VM::EC2::Instance::Metadata->new() =head2 $meta = $ec2->instance_metadata() =head2 $meta = $instance->metadata()" +You can create a new metadata object either using this class's \fInew()\fR +constructor, or by calling an \s-1VM::EC2\s0 object's \fIinstance_metadata()\fR +method, or by calling a VM::EC2::Instance object's metadata () method. +.SS "Methods that return scalar values" +.IX Subsection "Methods that return scalar values" +The following methods all return single-valued results: +.IP "Image information:" 4 +.IX Item "Image information:" +.Vb 7 +\& imageId \-\- ID of AMI used to launch this instance +\& imageLaunchIndex \-\- This index\*(Aqs launch index. If four instances +\& were launched by one $image\->run_instances() +\& call, they will be numbered from 0 to 3. +\& amiManifestPath \-\- S3 path to the image +\& imageLocation \-\- Same as amiManifestPath(), for consistency with +\& VM::EC2::Image +.Ve +.IP "Launch and runtime information:" 4 +.IX Item "Launch and runtime information:" +.Vb 7 +\& instanceId \-\- ID of this instance +\& kernelId \-\- ID of this instance\*(Aqs kernel. +\& ramdiskId \-\- This instance\*(Aqs ramdisk ID +\& reservationId \-\- This instance\*(Aqs reservation ID +\& instanceType \-\- Machine type, e.g. "m1.small" +\& availabilityZone \-\- This instance\*(Aqs availability zone. +\& userData \-\- User data passed at launch time. +.Ve +.IP "Network information:" 4 +.IX Item "Network information:" +.Vb 10 +\& localHostname \-\- The instance hostname corresponding to its +\& internal EC2 IP address. +\& privateDnsName \-\- Same as localHostname(), for consistency with +\& VM::EC2::Instance +\& localIpv4 \-\- The instance IP address on the internal EC2 network. +\& privateIpAddress \-\- Same as localIpv4(), for consistency with +\& VM::EC2::Instance. +\& mac \-\- This instance\*(Aqs MAC (ethernet) address. +\& publicHostname \-\- This instance\*(Aqs public hostname. +\& dnsName \-\- Same as publicHostname() for consistency with +\& VM::EC2::Instance. +\& publicIpv4 \-\- This instance\*(Aqs public IP address. +\& ipAddress \-\- Same as publicIpv4() for consistency with +\& VM::EC2::Instance. +\&=item Unknown information: +\& +\& profile \-\- An undocumented field that contains the virtualization +\& type in the form "default\-paravirtual". +\& instanceAction \-\- Undocumented metadata field named "instance\-action" +.Ve +.SS "Methods that return lists" +.IX Subsection "Methods that return lists" +The following methods all return lists. +.IP "Image information" 4 +.IX Item "Image information" +.Vb 4 +\& ancestorAmiIds \-\- List of AMIs from which the current one was derived +\& imageAncestorIds \-\- Same as ancestorAmiIds() but easier to read. +\& productCodes \-\- List of product codes applying to the image from which +\& this instance was launched. +.Ve +.IP "Launch and runtime information" 4 +.IX Item "Launch and runtime information" +.Vb 4 +\& securityGroups \-\- List of security groups to which this instance is assigned. +\& For non\-VPC instances, this will be the security group +\& name. For VPC instances, this will be the security group ID. +\& publicKeys \-\- List of public key pair names attached to this instance. +.Ve +.SS "Methods that return a hashref" +.IX Subsection "Methods that return a hashref" +The following methods return a hashref for representing complex data structures: +.ie n .IP "$devices = $meta\->blockDeviceMapping" 4 +.el .IP "\f(CW$devices\fR = \f(CW$meta\fR\->blockDeviceMapping" 4 +.IX Item "$devices = $meta->blockDeviceMapping" +This returns a hashref in which the keys are the names of instance +block devices, such as \*(L"/dev/sda1\*(R", and the values are the \s-1EC2\s0 virtual +machine names. For example: +.Sp +.Vb 8 +\& x $meta\->blockDeviceMapping +\& 0 HASH(0x9b4f2f8) +\& \*(Aq/dev/sda1\*(Aq => \*(Aqroot\*(Aq +\& \*(Aq/dev/sda2\*(Aq => \*(Aqephemeral0\*(Aq +\& \*(Aq/dev/sdg\*(Aq => \*(Aqebs1\*(Aq +\& \*(Aq/dev/sdh\*(Aq => \*(Aqebs9\*(Aq +\& \*(Aq/dev/sdi\*(Aq => \*(Aqebs10\*(Aq +\& \*(Aqsda3\*(Aq => \*(Aqswap\*(Aq +.Ve +.Sp +For reasons that are not entirely clear, the swap device is reported +as \*(L"sda3\*(R" rather than as \*(L"/dev/sda3\*(R". +.ie n .IP "$interfaces = $meta\->interfaces" 4 +.el .IP "\f(CW$interfaces\fR = \f(CW$meta\fR\->interfaces" 4 +.IX Item "$interfaces = $meta->interfaces" +Returns a mapping of all virtual ethernet devices owned by this +instance. This is primarily useful for \s-1VPC\s0 instances, which can have +more than one device. The hash keys are the \s-1MAC\s0 addresses of each +ethernet device, and the values are hashes that have the following +keys: +.Sp +.Vb 9 +\& mac +\& localHostname +\& localIpv4s (an array ref) +\& publicIpv4s (an array ref) +\& securityGroupIds (an array ref) +\& subnetId +\& subnetIpv4CidrBlock +\& vpcId +\& vpcIpv4CidrBlock +.Ve +.Sp +For example: +.Sp +.Vb 10 +\& D +\& x $meta\->interfaces +\& 0 HASH(0x9b4f518) +\& \*(Aq12:31:38:01:b8:97\*(Aq => HASH(0x9eaa090) +\& \*(AqlocalHostname\*(Aq => \*(AqdomU\-12\-31\-38\-01\-B8\-97.compute\-1.internal\*(Aq +\& \*(AqlocalIpv4s\*(Aq => ARRAY(0x9b4f8a8) +\& 0 \*(Aq10.253.191.101\*(Aq +\& \*(Aqmac\*(Aq => \*(Aq12:31:38:01:b8:97\*(Aq +\& \*(AqpublicIpv4s\*(Aq => ARRAY(0x9ea9e40) +\& 0 \*(Aq184.73.241.210\*(Aq +\& \*(AqsecurityGroupIds\*(Aq => ARRAY(0x9eaa490) +\& empty array +\& \*(AqsubnetId\*(Aq => undef +\& \*(AqsubnetIpv4CidrBlock\*(Aq => undef +\& \*(AqvpcId\*(Aq => undef +\& \*(AqvpcIpv4CidrBlock\*(Aq => undef +.Ve +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::BlockDevice +VM::EC2::State::Reason +VM::EC2::State +VM::EC2::Instance +VM::EC2::Tag +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::MonitoringState.3pm b/perl/man/man3/VM::EC2::Instance::MonitoringState.3pm new file mode 100644 index 0000000..cb42d1d --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::MonitoringState.3pm @@ -0,0 +1,191 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::MonitoringState 3pm" +.TH VM::EC2::Instance::MonitoringState 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::MonitoringState \- Object describing the monitoring state of an EC2 instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $monitor = $ec2\->monitor_instances(\*(Aqi\-12345\*(Aq); +\& $instance = $monitor\->instanceId; +\& $monitoring = $monitor\->monitoring; +\& +\& $monitor\->enable; +\& $monitor\->disable; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the monitoring state of an Amazon \s-1EC2\s0 instance. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 2 +\& instanceId \-\- The instance that is being reported +\& monitoring \-\- The monitoring state: one of "disabled", "enabled", "pending" +.Ve +.PP +To turn monitoring of an instance on, call: +.PP +.Vb 1 +\& $monitor\->enable(); +.Ve +.PP +to unmonitor an instance, call: +.PP +.Vb 1 +\& $monitor>disable(); +.Ve +.PP +It is probably easier to control this using the Instance object's \fImonitoring()\fR method. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +string \*(L"$instanceId monitoring is \f(CW$monitoring\fR\*(R". +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::PasswordData.3pm b/perl/man/man3/VM::EC2::Instance::PasswordData.3pm new file mode 100644 index 0000000..499dbb6 --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::PasswordData.3pm @@ -0,0 +1,180 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::PasswordData 3pm" +.TH VM::EC2::Instance::PasswordData 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::PasswordData \- Object describing the administrative password stored in an EC2 Windows instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-12345\*(Aq); +\& $pass = $instance\->password_data; +\& print $pass\->password,"\en"; +\& print $pass\->timestamp,"\en" +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the administrative password stored in a Windows +\&\s-1EC2\s0 instance. It is returned by calling either +\&\s-1VM::EC2\-\s0>get_password_data or a VM::EC2::Instance object's +\&\fIpassword_data()\fR method. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 4 +\& instanceId \-\- ID of the instance +\& timestamp \-\- The time the data was last updated. +\& passwordData \-\- The password of the instance. +\& password() \-\- Same as passwordData(). +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +password. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::Placement.3pm b/perl/man/man3/VM::EC2::Instance::Placement.3pm new file mode 100644 index 0000000..ca9cdc7 --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::Placement.3pm @@ -0,0 +1,173 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::Placement 3pm" +.TH VM::EC2::Instance::Placement 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Instance::Placement \- Object describing an Amazon EC2 instance's placement +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the placement of an instance in an Amazon \s-1EC2\s0 availability region +and cluster group. It is returned by \s-1VM::EC2\-\s0>describe_instances +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 4 +\& availabilityZone \-\- The availability zone of the instance. +\& groupName \-\- The name of the placement group in a +\& cluster computing instance. +\& tenancy \-\- Tenancy of the instance, e.g. "dedicated". +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +availabilityZone. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::Set.3pm b/perl/man/man3/VM::EC2::Instance::Set.3pm new file mode 100644 index 0000000..9bcd2dd --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::Set.3pm @@ -0,0 +1,179 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::Set 3pm" +.TH VM::EC2::Instance::Set 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Instance::Set \- Object describing a set of instances +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @instances = $ec2\->run_instances(\-image_id=>\*(Aqami\-12345\*(Aq); +\& for my $i (@instances) { +\& $res = $i\->reservationId; +\& $req = $i\->requesterId; +\& $owner = $i\->ownerId; +\& @groups = $i\->groups; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used internally to manage the output of +\&\s-1VM::EC2\-\s0>\fIrun_instances()\fR, which returns information about the +reservation and security groups as well as the list of launched +instances. Because reservations are infrequently used, this object is +not used directly; instead the reservation and requester IDs contained +within it are stored in the VM::EC2::Instance objects returned +by \fIrun_instances()\fR. +.SH "METHODS" +.IX Header "METHODS" +One object method is supported: +.ie n .SS "@instances = $reservation_set\->\fIinstances()\fP" +.el .SS "\f(CW@instances\fP = \f(CW$reservation_set\fP\->\fIinstances()\fP" +.IX Subsection "@instances = $reservation_set->instances()" +This will return the instances contained within the instance set. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::State.3pm b/perl/man/man3/VM::EC2::Instance::State.3pm new file mode 100644 index 0000000..ca4da87 --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::State.3pm @@ -0,0 +1,191 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::State 3pm" +.TH VM::EC2::Instance::State 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::State \- Object describing the state of an EC2 instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-12345\*(Aq); +\& $state = $instance\->state; +\& $code = $state\->code; +\& $name = $state\->name; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the state of an Amazon \s-1EC2\s0 instance. It is +returned by calling the \fIstate()\fR method of an VM::EC2::Instance, +and is also returned by \s-1VM::EC2\-\s0>\fIstart_instances()\fR, \fIstop_instances()\fR and +\&\fIterminate_instances()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 2 +\& code \-\- The state code +\& name \-\- The state name +\& +\& Code Name +\& \-\-\-\- \-\-\-\-\-\-\- +\& 0 pending +\& 16 running +\& 32 shutting\-down +\& 48 terminated +\& 64 stopping +\& 80 stopped +\& 272 +.Ve +.PP +Code 272 is said to correspond to a problem with the instance host. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +name. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::State +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Instance::State::Reason.3pm b/perl/man/man3/VM::EC2::Instance::State::Reason.3pm new file mode 100644 index 0000000..1f0bed1 --- /dev/null +++ b/perl/man/man3/VM::EC2::Instance::State::Reason.3pm @@ -0,0 +1,207 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Instance::State::Reason 3pm" +.TH VM::EC2::Instance::State::Reason 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::State::Reason \- Object describing the reason for an EC2 instance state change +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $instance = $ec2\->describe_instances(\-instance_id=>\*(Aqi\-12345\*(Aq); +\& $reason = $instance\->reason; +\& $code = $reason\->code; +\& $message = $reason\->message; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents the reason that an Amazon \s-1EC2\s0 instance +underwent a state change. It is returned by calling the \fIreason()\fR +method of VM::EC2::Instance. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 2 +\& code \-\- The state change reason code. +\& message \-\- The state change reason method. +.Ve +.PP +The following table lists the codes and messages (source: +http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/ApiReference\-ItemType\-StateReasonType.html): +.PP +.Vb 4 +\& Code Message +\& \-\-\-\- \-\-\-\-\-\-\- +\& Server.SpotInstanceTermination A Spot Instance was terminated due +\& to an increase in the market price. +\& +\& Server.InternalError An internal error occurred during +\& instance launch, resulting in termination. +\& +\& Server.InsufficientInstanceCapacity There was insufficient instance capacity +\& to satisfy the launch request. +\& +\& Client.InternalError A client error caused the instance to +\& terminate on launch. +\& +\& Client.InstanceInitiatedShutdown The instance initiated shutdown by a shutdown \-h +\& command issued from inside the instance. +\& +\& Client.UserInitiatedShutdown The instance was shutdown by a user via an +\& API call. +\& +\& Client.VolumeLimitExceeded The volume limit was exceeded. +\& +\& Client.InvalidSnapshot.NotFound The specified snapshot was not found. +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +message. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::State +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::KeyPair.3pm b/perl/man/man3/VM::EC2::KeyPair.3pm new file mode 100644 index 0000000..b2bccf1 --- /dev/null +++ b/perl/man/man3/VM::EC2::KeyPair.3pm @@ -0,0 +1,187 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::KeyPair 3pm" +.TH VM::EC2::KeyPair 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::KeyPair \- Object describing an Amazon EC2 ssh key pair +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @pairs = $ec2\->describe_key_pairs(); +\& +\& foreach (@pairs) { +\& $fingerprint = $_\->keyFingerprint; +\& $name = $_\->keyName; +\& } +\& +\& $newkey = $ec2\->create_key_pair("fred\*(Aqs key"); +\& print $newkey\->privateKey; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 ssh key pair, and is returned +by \s-1VM::EC2\-\s0>\fIdescribe_key_pairs()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 2 +\& keyName \-\- Name of the key, e.g. "fred\-default" +\& name \-\- Shorter version of keyName() +\& +\& keyFingerprint \-\- Key\*(Aqs fingerprint +\& fingerprint \-\- Shorter version of keyFingerprint() +\& +\& keyMaterial \-\- PEM encoded RSA private key (only available when +\& creating a new key) +\& privateKey \-\- More intuitive version of keyMaterial() +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +keyName. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Region.3pm b/perl/man/man3/VM::EC2::Region.3pm new file mode 100644 index 0000000..4112b02 --- /dev/null +++ b/perl/man/man3/VM::EC2::Region.3pm @@ -0,0 +1,181 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Region 3pm" +.TH VM::EC2::Region 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Region \- Object describing an Amazon region +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @regions = $ec2\->describe_regions(); +\& +\& $region = $regions[0]; +\& $name = $region\->regionName; +\& $url = $region\->regionEndpoint; +\& @zones = $region\->zones; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 region, and is returned +by \s-1VM::EC2\-\s0>\fIdescribe_regions()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 6 +\& regionName \-\- Name of the region, e.g. "eu\-west\-1" +\& regionEndpoint \-\- URL endpoint for AWS API calls, e.g. +\& "ec2.eu\-west\-1.amazonaws.com" +\& zones \-\- List of availability zones within this +\& region, as VM::EC2::AvailabilityZone +\& objects. +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +regionName. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::ReservationSet.3pm b/perl/man/man3/VM::EC2::ReservationSet.3pm new file mode 100644 index 0000000..e2c0b68 --- /dev/null +++ b/perl/man/man3/VM::EC2::ReservationSet.3pm @@ -0,0 +1,177 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::ReservationSet 3pm" +.TH VM::EC2::ReservationSet 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Reservation \- Object describing an instance reservation set +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @instances = $ec2\->describe_instances(); +\& for my $i (@instances) { +\& $res = $i\->reservationId; +\& $req = $i\->requesterId; +\& $owner = $i\->ownerId; +\& @groups = $i\->groups; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used internally to manage the output of +\&\s-1VM::EC2\-\s0>\fIdescribe_instances()\fR. Because reservations are infrequently +used, this object is not used directly; instead the reservation and +requester IDs contained within it are stored in the +VM::EC2::Instance objects returned by \fIdescribe_instances()\fR. +.SH "METHODS" +.IX Header "METHODS" +One object method is supported: +.ie n .SS "@instances = $reservation_set\->\fIinstances()\fP" +.el .SS "\f(CW@instances\fP = \f(CW$reservation_set\fP\->\fIinstances()\fP" +.IX Subsection "@instances = $reservation_set->instances()" +This will return the instances contained within the reservation set. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::ReservedInstance.3pm b/perl/man/man3/VM::EC2::ReservedInstance.3pm new file mode 100644 index 0000000..c15f618 --- /dev/null +++ b/perl/man/man3/VM::EC2::ReservedInstance.3pm @@ -0,0 +1,232 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::ReservedInstance 3pm" +.TH VM::EC2::ReservedInstance 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::ReservedInstance \- Object describing an Amazon EC2 reserved instance +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @offerings = $ec2\->describe_reserved_instances(); +\& for my $o (@offerings) { +\& print $o\->reservedInstancesId,"\en"; +\& print $o\->instanceType,"\en"; +\& print $o\->availabilityZone,"\en"; +\& print $o\->start,"\en"; +\& print $o\->duration,"\en"; +\& print $o\->fixedPrice,"\en"; +\& print $o\->usagePrice,"\en"; +\& print $o\->instanceCount,"\en"; +\& print $o\->productDescription,"\en"; +\& print $o\->state,"\en"; +\& print $o\->instanceTenancy,"\en"; +\& print $o\->currencyCode,"\en"; +\& $tags = $o\->tags; +\& } +\&=head1 DESCRIPTION +.Ve +.PP +This object represents an Amazon \s-1EC2\s0 reserved instance reservation +that you have purchased, as returned by +\&\s-1VM::EC2\-\s0>\fIdescribe_reserved_instances()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 1 +\& reservedInstancesId \-\- ID of this reserved instance contract +\& +\& instanceType \-\- The instance type on which these reserved +\& instance can be used. +\& +\& availabilityZone \-\- The availability zone in which these reserved +\& instances can be used. +\& +\& start \-\- The date and time that this contract was established. +\& +\& duration \-\- The duration of this contract, in seconds. +\& +\& fixedPrice \-\- The purchase price of the reserved instance for the indicated +\& version. +\& +\& usagePrice \-\- The usage price of the reserved instance, per hour. +\& +\& instanceCount \-\- The number of instances that were purchased under this contract. +\& +\& productDescription \-\- The reserved instance description. One of "Linux/UNIX", +\& "Linux/UNIX (Amazon VPC)", "Windows", and "Windows (Amazon VPC)" +\& +\& state \-\- The state of the reserved instance purchase. One of "payment\-pending", +\& "active", "payment\-failed", and "retired". +\& +\& tagSet \-\- Tags for this reserved instance set. More conveniently accessed via +\& the tags(), add_tags() and delete_tags() methods. +\& +\& instanceTenancy \-\- The tenancy of the reserved instance (VPC only). +\& +\& currencyCode \-\- The currency of the reserved instance offering prices. +.Ve +.PP +This object supports the various tag manipulation methods described in +VM::EC2::Generic. In addition it supports the following methods: +.ie n .SS "$status = $reserved_instance\->current_status" +.el .SS "\f(CW$status\fP = \f(CW$reserved_instance\fP\->current_status" +.IX Subsection "$status = $reserved_instance->current_status" +Refreshes the object and returns its state, one of \*(L"payment-pending\*(R", +\&\*(L"active\*(R", \*(L"payment-failed\*(R", and \*(L"retired\*(R". You can use this to monitor +the progress of a purchase. +.ie n .SS "$reserved_instance\->refresh" +.el .SS "\f(CW$reserved_instance\fP\->refresh" +.IX Subsection "$reserved_instance->refresh" +Calls \s-1VM::EC2\-\s0>\fIdescribe_reserved_instances()\fR to refresh the object +against current information in Amazon. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +reservedInstancesId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::ReservedInstances::Offering +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::ReservedInstance::Offering.3pm b/perl/man/man3/VM::EC2::ReservedInstance::Offering.3pm new file mode 100644 index 0000000..ab423ce --- /dev/null +++ b/perl/man/man3/VM::EC2::ReservedInstance::Offering.3pm @@ -0,0 +1,214 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::ReservedInstance::Offering 3pm" +.TH VM::EC2::ReservedInstance::Offering 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::ReservedInstance::Offering \- Object describing an Amazon EC2 reserved instance offering +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @offerings = $ec2\->describe_reserved_instances_offerings(); +\& for my $o (@offerings) { +\& print $o\->reservedInstancesOfferingId,"\en"; +\& print $o\->instanceType,"\en"; +\& print $o\->availabilityZone,"\en"; +\& print $o\->duration,"\en"; +\& print $o\->fixedPrice,"\en"; +\& print $o\->usagePrice,"\en"; +\& print $o\->productDescription,"\en"; +\& print $o\->instanceTenancy,"\en"; +\& print $o\->currencyCode,"\en"; +\& } +\& +\& # purchase the first one +\& $offerings[0]\->purchase() && print "offer purchased\en"; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 reserved instance offering, as +returned by \s-1VM::EC2\-\s0>describe_reserved_instances_offerings. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 1 +\& reservedInstancesOfferingId \-\- ID of this offer +\& +\& instanceType \-\- The instance type on which this reserved +\& instance can be used. +\& +\& availabilityZone \-\- The availability zone in which this reserved +\& instance can be used. +\& +\& duration \-\- The duration of the reserved instance contract, in seconds. +\& +\& fixedPrice \-\- The purchase price of the reserved instance for the indicated +\& version. +\& +\& usagePrice \-\- The usage price of the reserved instance, per hour. +\& +\& productDescription \-\- The reserved instance description. One of "Linux/UNIX", +\& "Linux/UNIX (Amazon VPC)", "Windows", and "Windows (Amazon +\& VPC)" +\& +\& instanceTenancy \-\- The tenancy of the reserved instance (VPC only). +\& +\& currencyCode \-\- The currency of the reserved instance offering prices. +.Ve +.PP +In addition, this object supports the \fIpurchase()\fR method: +.ie n .SS "$boolean = $offering\->purchase($count)" +.el .SS "\f(CW$boolean\fP = \f(CW$offering\fP\->purchase($count)" +.IX Subsection "$boolean = $offering->purchase($count)" +Purchases the offering and returns true on success. The optional +\&\f(CW$count\fR argument specifies the number of reserved instances to purchase +(default 1). +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +reservedInstancesOfferingId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::SecurityGroup.3pm b/perl/man/man3/VM::EC2::SecurityGroup.3pm new file mode 100644 index 0000000..9bb9826 --- /dev/null +++ b/perl/man/man3/VM::EC2::SecurityGroup.3pm @@ -0,0 +1,350 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::SecurityGroup 3pm" +.TH VM::EC2::SecurityGroup 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::SecurityGroup \- Object describing an Amazon EC2 security group +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @sg = $ec2\->describe_security_groups; +\& for my $sg (@sg) { +\& $name = $sg\->groupName; +\& $id = $sg\->groupId; +\& $desc = $sg\->groupDescription; +\& $tags = $sg\->tags; +\& @inbound_permissions = $sg\->ipPermissions; +\& @outbound_permissions = $sg\->ipPermissionEgress; +\& for $i (@inbound_permissions) { +\& $protocol = $i\->ipProtocol; +\& $fromPort = $i\->fromPort; +\& $toPort = $i\->toPort; +\& @ranges = $i\->ipRanges; +\& } +\& } +\& +\& $sg = $sg[0]; +\& +\& # Add a new security rule +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => 80, +\& \-source_ip => [\*(Aq192.168.2.0/24\*(Aq,\*(Aq192.168.2.1/24\*(Aq}); +\& +\& # write it to AWS. +\& $sg\->update(); +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe an Amazon \s-1EC2\s0 security group. It is +returned by \s-1VM::EC2\-\s0>\fIdescribe_security_groups()\fR. You may also obtain +this object by calling an Instance object's \fIgroups()\fR method, and then +invoking one of the group's \fIpermissions()\fR method. See +VM::EC2::Group. +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 10 +\& ownerId \-\- Owner of this security group +\& groupId \-\- ID of this security group +\& groupName \-\- Name of this security group +\& groupDescription \-\- Description of this group +\& vpcId \-\- Virtual Private Cloud ID, if applicable +\& ipPermissions \-\- A list of rules that govern incoming connections +\& to instances running under this security group. +\& Each rule is a +\& L object. +\& ipPermissionsEgress \-\- A list of rules that govern outgoing connections +\& from instances running under this security group. +\& Each rule is a +\& L. +\& This field is only valid for VPC groups. +\& tags \-\- Hashref containing tags associated with this group. +\& See L. +.Ve +.PP +For convenience, the following aliases are provided for commonly used methods: +.PP +.Vb 3 +\& inbound_permissions \-\- same as ipPermissions() +\& outbound_permissions \-\- same as ipPermissionsEgress() +\& name \-\- same as groupName() +.Ve +.PP +See VM::EC2::SecurityGroup::IpPermission for details on accessing +port numbers, \s-1IP\s0 ranges and other fields associated with incoming and +outgoing firewall rules. +.SH "MODIFYING FIREWALL RULES" +.IX Header "MODIFYING FIREWALL RULES" +To add or revoke firewall rules, call the authorize_incoming, +authorize_outgoing, revoke_incoming or \fIrevoke_outgoing()\fR methods +one or more times. Each of these methods either adds or removes a +single firewall rule. After adding or revoking the desired rules, call +\&\fIupdate()\fR to write the modified group back to Amazon. The object will +change to reflect the new permissions. +.ie n .SS "$permission = $group\->authorize_incoming(%args)" +.el .SS "\f(CW$permission\fP = \f(CW$group\fP\->authorize_incoming(%args)" +.IX Subsection "$permission = $group->authorize_incoming(%args)" +Add a rule for incoming firewall traffic. Arguments are as follows: +.PP +.Vb 3 +\& \-protocol The protocol, either a string (tcp,udp,icmp) or +\& the corresponding protocol number (6, 17, 1). +\& Use \-1 to indicate all protocols. (required) +\& +\& \-port, \-ports The port or port range. When referring to a single +\& port, you may use either the port number or the +\& service name (e.g. "ssh"). For this to work the +\& service name must be located in /etc/services. +\& When specifying a port range, use "start..end" as +\& in "8000..9000". Note that this is a string that +\& contains two dots, and not two numbers separated +\& by the perl range operator. For the icmp protocol, +\& this argument corresponds to the ICMP type number. +\& (required). +\& +\& \-group, \-groups Security groups to authorize. Instances that belong +\& to the named security groups will be allowed +\& access. You may specify either a single group or +\& a list of groups as an arrayref. The following +\& syntaxes are recognized: +\& +\& "sg\-12345" authorize group with this groupId +\& "12345/my group" authorize group named "my group" +\& owned by user 12345 +\& "my group" authorize group named "my group" +\& owned by yourself +\& +\& \-source, \-source_ip Authorize incoming traffic from an IP address, IP +\& address range, or set of such ranges. IP +\& addresses use the CIDR notation of a.b.c.d/mask, +\& as described in +\& http://en.wikipedia.org/wiki/Classless_Inter\-Domain_Routing. +\& Pass an arrayref to simultaneously authorize +\& multiple CIDR ranges. +.Ve +.PP +The result of this call is a VM::EC2::SecurityGroup::IpPermission +object corresponding to the rule you defined. Note that the rule is +not written to Amazon until you call \fIupdate()\fR. +.PP +Here are some examples: +.PP +.Vb 3 +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => 80, +\& \-source_ip => [\*(Aq192.168.2.0/24\*(Aq,\*(Aq192.168.2.1/24\*(Aq}); +\& +\& # TCP on ports 22 and 23 from anyone +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => \*(Aq22..23\*(Aq, +\& \-source_ip => \*(Aq0.0.0.0/0\*(Aq); +\& +\& # ICMP on echo (ping) port from anyone +\& $sg\->authorize_incoming(\-protocol => \*(Aqicmp\*(Aq, +\& \-port => 0, +\& \-source_ip => \*(Aq0.0.0.0/0\*(Aq); +\& +\& # TCP to port 25 (mail) from instances belonging to +\& # the "Mail relay" group belonging to user 12345678. +\& $sg\->authorize_incoming(\-protocol => \*(Aqtcp\*(Aq, +\& \-port => 25, +\& \-group => \*(Aq12345678/Mail relay\*(Aq); +.Ve +.ie n .SS "$permission = $group\->authorize_outgoing(%args)" +.el .SS "\f(CW$permission\fP = \f(CW$group\fP\->authorize_outgoing(%args)" +.IX Subsection "$permission = $group->authorize_outgoing(%args)" +This is identical to \fIauthorize_incoming()\fR except that the rule applies +to outbound traffic. Only \s-1VPC\s0 security groups can define outgoing +firewall rules. +.ie n .SS "$permission = $group\->revoke_incoming($rule)" +.el .SS "\f(CW$permission\fP = \f(CW$group\fP\->revoke_incoming($rule)" +.IX Subsection "$permission = $group->revoke_incoming($rule)" +.ie n .SS "$permission = $group\->revoke_incoming(%args)" +.el .SS "\f(CW$permission\fP = \f(CW$group\fP\->revoke_incoming(%args)" +.IX Subsection "$permission = $group->revoke_incoming(%args)" +This method revokes an incoming firewall rule. You can call it with a +single argument consisting of a +VM::EC2::SecurityGroup::IpPermission object in order to revoke that +rule. Alternatively, when called with the named arguments listed for +\&\fIauthorize_incoming()\fR, it will attempt to match an existing rule to the +provided arguments and queue it for deletion. +.PP +Here is an example of revoking all rules that allow ssh (port 22) +access: +.PP +.Vb 3 +\& @ssh_rules = grep {$_\->fromPort == 22} $group\->ipPermissions; +\& $group\->revoke_incoming($_) foreach @ssh_rules; +\& $group\->update(); +.Ve +.ie n .SS "$boolean = $group\->\fIupdate()\fP" +.el .SS "\f(CW$boolean\fP = \f(CW$group\fP\->\fIupdate()\fP" +.IX Subsection "$boolean = $group->update()" +This method will write all queued rule authorizations and revocations +to Amazon, and return a true value if successful. The method will +return false if any of the rule updates failed. You can examine the +\&\s-1VM::EC2\s0 object's \fIerror_str()\fR method to determine what went wrong, and +check the group object's \fIipPermissions()\fR method to see what firewall +rules are currently defined. +.ie n .SS "$boolean = $group\->\fIwrite()\fP" +.el .SS "\f(CW$boolean\fP = \f(CW$group\fP\->\fIwrite()\fP" +.IX Subsection "$boolean = $group->write()" +An alias for \fIupdate()\fR +.ie n .SS "$group\->\fIrefresh()\fP" +.el .SS "\f(CW$group\fP\->\fIrefresh()\fP" +.IX Subsection "$group->refresh()" +This method refreshes the group information from Amazon. It is called +automatically by \fIupdate()\fR. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +groupId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +VM::EC2::Group +VM::EC2::SecurityGroup::IpPermission +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::SecurityGroup::GroupPermission.3pm b/perl/man/man3/VM::EC2::SecurityGroup::GroupPermission.3pm new file mode 100644 index 0000000..3a3898d --- /dev/null +++ b/perl/man/man3/VM::EC2::SecurityGroup::GroupPermission.3pm @@ -0,0 +1,213 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::SecurityGroup::GroupPermission 3pm" +.TH VM::EC2::SecurityGroup::GroupPermission 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::SecurityGroup::GroupPermission \- Object describing an authorized group within a security group firewall rule +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 4 +\& $ec2 = VM::EC2\->new(...); +\& $sg = $ec2\->describe_security_groups(\-name=>\*(AqMy Group\*(Aq); +\& @rules = $sg\->ipPermissions; +\& $rule = $rules[0]; +\& +\& @groups = $rule\->groups; +\& for my $g (@groups) { +\& $userId = $g\->userId; +\& $name = $g>groupName; +\& $id = $g\->groupId; +\& $group_object = $g\->security_group; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object describes a security group whose instances are granted +permission to exchange data traffic with another group of +instances. It is returned by the \fIgroups()\fR method of +VM::EC2::SecurityGroup::ipPermission. +.PP +Note that this object is not the same as a bona fide +VM::EC2::SecurityGroup, which has access to the group's firewall +rules. This object contains just the name, id and owner of a group +used within a firewall rule. For groups that belong to you, you can +get the full VM::EC2::SecurityGroup object by calling the +\&\fIsecurity_group()\fR method. These details are not available to groups +that belong to other accounts. +.SH "METHODS" +.IX Header "METHODS" +.ie n .SS "$id = $group\->groupId" +.el .SS "\f(CW$id\fP = \f(CW$group\fP\->groupId" +.IX Subsection "$id = $group->groupId" +Return the group's unique \s-1ID\s0. +.ie n .SS "$id = $group\->userId" +.el .SS "\f(CW$id\fP = \f(CW$group\fP\->userId" +.IX Subsection "$id = $group->userId" +Return the account \s-1ID\s0 of the owner of this group. +.ie n .SS "$id = $group\->groupName" +.el .SS "\f(CW$id\fP = \f(CW$group\fP\->groupName" +.IX Subsection "$id = $group->groupName" +Return this group's name. +.ie n .SS "$string = $group\->short_name" +.el .SS "\f(CW$string\fP = \f(CW$group\fP\->short_name" +.IX Subsection "$string = $group->short_name" +Return a string for use in string overloading. See \*(L"\s-1STRING\s0 +\&\s-1OVERLOADING\s0\*(R". +.ie n .SS "$sg = $group\->security_group" +.el .SS "\f(CW$sg\fP = \f(CW$group\fP\->security_group" +.IX Subsection "$sg = $group->security_group" +For groups that belong to the current account, calls +\&\s-1VM::EC2\-\s0>\fIdescribe_security_groups()\fR to turn the group name into a +VM::EC2::SecurityGroup. For groups that belong to a different +account, will return undef, since \fIdescribe_security_groups()\fR on other +accounts is not allowed by Amazon. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the user +id and group name in the form \*(L"userId/groupName\*(R" for groups that +belong to other accounts, and the groupName alone in the case of +groups that belong to you. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::SecurityGroup +VM::EC2::SecurityGroup::IpPermission +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::SecurityGroup::IpPermission.3pm b/perl/man/man3/VM::EC2::SecurityGroup::IpPermission.3pm new file mode 100644 index 0000000..aef9f7c --- /dev/null +++ b/perl/man/man3/VM::EC2::SecurityGroup::IpPermission.3pm @@ -0,0 +1,242 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::SecurityGroup::IpPermission 3pm" +.TH VM::EC2::SecurityGroup::IpPermission 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::SecurityGroup::IpPermission \- Object describing a firewall rule in an EC2 security group. +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 2 +\& $ec2 = VM::EC2\->new(...); +\& $sg = $ec2\->describe_security_groups(\-name=>\*(AqMy Group\*(Aq); +\& +\& my @rules = $sg\->ipPermissions; +\& for my $rule (@rules) { # each rule is a VM::EC2::SecurityGroup::IpPermission +\& $protocol = $rule\->ipProtocol; +\& $fromPort = $rule\->fromPort; +\& $toPort = $rule\->toPort; +\& @ranges = $rule\->ipRanges; +\& @groups = $rule\->groups; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe the firewall rules defined within an +Amazon \s-1EC2\s0 security group. It is returned by the +VM::EC2::SecurityGroup object's \fIipPermissions()\fR and +\&\fIipPermissionsEgress()\fR methods (these are also known as +\&\fIinbound_permissions()\fR and \fIoutbound_permissions()\fR). +.SH "METHODS" +.IX Header "METHODS" +.ie n .SS "$protocol = $rule\->ipProtocol" +.el .SS "\f(CW$protocol\fP = \f(CW$rule\fP\->ipProtocol" +.IX Subsection "$protocol = $rule->ipProtocol" +Return the \s-1IP\s0 protocol for this rule: one of \*(L"tcp\*(R", \*(L"udp\*(R" or \*(L"icmp\*(R". +.ie n .SS "$port = $rule\->fromPort" +.el .SS "\f(CW$port\fP = \f(CW$rule\fP\->fromPort" +.IX Subsection "$port = $rule->fromPort" +Start of the port range defined by this rule, or the \s-1ICMP\s0 type +code. This will be a numeric value, like 80, or \-1 to indicate all +ports/codes. +.ie n .SS "$port = $rule\->toPort" +.el .SS "\f(CW$port\fP = \f(CW$rule\fP\->toPort" +.IX Subsection "$port = $rule->toPort" +End of the port range defined by this rule, or the \s-1ICMP\s0 type +code. This will be a numeric value, like 80, or \-1 to indicate all +ports/codes. +.ie n .SS "@ips = $rule\->ipRanges" +.el .SS "\f(CW@ips\fP = \f(CW$rule\fP\->ipRanges" +.IX Subsection "@ips = $rule->ipRanges" +This method will return a list of the \s-1IP\s0 addresses that are allowed to +originate or receive traffic, provided that the rule defines IP-based +firewall filtering. +.PP +Each address is a \s-1CIDR\s0 (classless internet domain routing) address in +the form a.b.c.d/n, such as 10.23.91.0/24 +(http://en.wikipedia.org/wiki/Classless_Inter\-Domain_Routing). The +\&\*(L"any\*(R" address is in the form 0.0.0.0/0. +.ie n .SS "@groups = $rule\->groups" +.el .SS "\f(CW@groups\fP = \f(CW$rule\fP\->groups" +.IX Subsection "@groups = $rule->groups" +This method will return a list of the security groups that are allowed +to originate or receive traffic from instances assigned to this +security group, provided that the rule defines group-based traffic +filtering. +.PP +Each returned object is a VM::EC2::SecurityGroup::GroupPermission, +not a VM::EC2::SecurityGroup. The reason for this is that these +traffic filtering groups can include security groups owned by other +accounts +.PP +The GroupPermission objects define the methods \fIuserId()\fR, \fIgroupId()\fR and +\&\fIgroupName()\fR. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the rule +using the following templates: +.PP +\&\s-1TCP\s0 port 22 open to any host: +.PP +.Vb 1 +\& "tcp(22..22) FROM CIDR 0.0.0.0/0" +.Ve +.PP +\&\s-1TCP\s0 ports 23 through 39 open to the two class C networks 192.168.0.* +and 192.168.1.*: +.PP +.Vb 1 +\& "tcp(23..29) FROM CIDR 192.168.0.0/24,192.168.1.0/24" +.Ve +.PP +\&\s-1UDP\s0 port 80 from security group \*(L"default\*(R" owned by you and the group +named \*(L"farmville\*(R" owned by user 9999999: +.PP +.Vb 1 +\& "udp(80..80) GRPNAME default,9999999/farmville" +.Ve +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +VM::EC2::SecurityGroup +VM::EC2::SecurityGroup::IpPermission +VM::EC2::SecurityGroup::GroupPermission +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Snapshot.3pm b/perl/man/man3/VM::EC2::Snapshot.3pm new file mode 100644 index 0000000..07721ab --- /dev/null +++ b/perl/man/man3/VM::EC2::Snapshot.3pm @@ -0,0 +1,345 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Snapshot 3pm" +.TH VM::EC2::Snapshot 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Snapshot \- Object describing an Amazon EBS snapshot +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @snap = $ec2\->describe_snapshots; +\& for my $snap (@snapshots) { +\& $id = $snap\->snapshotId; +\& $vol = $snap\->volumeId; +\& $state = $snap\->status; +\& $time = $snap\->startTime; +\& $progress = $snap\->progress; +\& $size = $snap\->size; +\& $description = $snap\->description; +\& $tags = $snap\->tags; +\& } +\& +\& # use a snapshot as the root device for a new AMI +\& $ami = $snap\->register_image(\-name => \*(AqMy new image\*(Aq, +\& \-kernel_id => \*(Aqaki\-407d9529\*(Aq, +\& \-architecture => \*(Aqi386\*(Aq); +\& +\& #create a volume from the snapshot +\& $vol = $snap\->create_volume(\-zone => \*(Aqus\-east\-1a\*(Aq); +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe an Amazon \s-1EBS\s0 snapshot. +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 11 +\& snapshotId \-\- ID of this snapshot +\& ownerId \-\- Owner of this snapshot +\& volumeId \-\- ID of the volume snapshot was taken from +\& status \-\- Snapshot state, one of "pending", "completed" or "error" +\& startTime \-\- Timestamp for when snapshot was begun. +\& progress \-\- The progress of the snapshot, in percent. +\& volumeSize \-\- Size of the volume, in gigabytes. +\& description \-\- Description of the snapshot +\& ownerAlias \-\- AWS account alias, such as "self". +\& tags \-\- Hashref containing tags associated with this group. +\& See L. +.Ve +.PP +In addition, this class provides several convenience functions: +.ie n .SS "$vol = $snap\->from_volume" +.el .SS "\f(CW$vol\fP = \f(CW$snap\fP\->from_volume" +.IX Subsection "$vol = $snap->from_volume" +Returns the VM::EC2::Volume object that this snapshot was originally +derived from. If the original volume no longer exists because it has +been deleted, this will return undef; if \-raise_error was passed to +the \s-1VM::EC2\s0 object, this will raise an exception. +.ie n .SS "@vol = $snap\->to_volumes" +.el .SS "\f(CW@vol\fP = \f(CW$snap\fP\->to_volumes" +.IX Subsection "@vol = $snap->to_volumes" +Returns all VM::EC2::Volume objects that were derived from this +snapshot. If no volumes currently exist that satisfy this criteria, +returns an empty list, but will not raise an error. +.ie n .SS "$image = $snap\->register_image(%args)" +.el .SS "\f(CW$image\fP = \f(CW$snap\fP\->register_image(%args)" +.IX Subsection "$image = $snap->register_image(%args)" +Register a new \s-1AMI\s0 using this snapshot as the root device. By default, +the root device will be mapped to /dev/sda1 and will delete on +instance termination. You can modify this behavior and add additional +block devices. +.PP +Arguments: +.PP +.Vb 1 +\& \-name Name for this image (required) +\& +\& \-description Description of this image +\& +\& \-kernel_id Kernel for this image (recommended) +\& +\& \-ramdisk_id Ramdisk for this image +\& +\& \-architecture Architecture ("i386" or "x86_64") +\& +\& \-root_device_name Specify the root device based +\& on this snapshot (/dev/sda1). +\& +\& \-root_size Size of the root volume (defaults +\& to size of the snapshot). +\& +\& \-root_delete_on_termination True value (default) to delete +\& the root volume after the instance +\& terminates. False value to keep the +\& EBS volume available. +\& +\& \-block_device_mapping Additional block devices you wish to +\& incorporate into the image. +\& +\& \-block_devices Same as above. +.Ve +.PP +See \s-1VM::EC2\s0 for information on the syntax of the +\&\-block_device_mapping argument. If the root device is explicitly +included in the block device mapping argument, then the arguments +specified in \-root_size, and \-root_delete_on_termination will be +ignored, and the current snapshot will not automatically be used as +the root device. +.PP +The return value is a VM::EC2::Image. You can call its +\&\fIcurrent_status()\fR method to poll its availability: +.PP +.Vb 6 +\& $snap = $ec2\->describe_snapshots(\*(Aqsnap\-123456\*(Aq); +\& $ami = $snap\->register_image(\-name => \*(AqMy new image\*(Aq, +\& \-kernel_id => \*(Aqaki\-407d9529\*(Aq, +\& \-architecture => \*(Aqi386\*(Aq, +\& \-block_devices => \*(Aq/dev/sdc=ephemeral0\*(Aq +\& ) or die $ec2\->error_str; +\& +\& while ($ami\->current_status eq \*(Aqpending\*(Aq) { +\& print "$ami: ",$ami\->current_status,"\en" +\& sleep 30; # takes a long time to register some images +\& } +\& +\& print "$ami is ready to go\en"; +.Ve +.ie n .SS "$volume = $snap\->create_volume(%args)" +.el .SS "\f(CW$volume\fP = \f(CW$snap\fP\->create_volume(%args)" +.IX Subsection "$volume = $snap->create_volume(%args)" +Create a new volume from this snapshot. Arguments are: +.PP +.Vb 2 +\& \-availability_zone \-\- An availability zone from +\& describe_availability_zones (required) +\& +\& \-size \-\- Size of the volume, in GB (between 1 and 1024). +.Ve +.PP +If \-size is not provided, then the new volume will have the same size as +the snapshot. +.PP +On success, the returned value is a VM::EC2::Volume object. +.ie n .SS "$status = $snap\->current_status" +.el .SS "\f(CW$status\fP = \f(CW$snap\fP\->current_status" +.IX Subsection "$status = $snap->current_status" +Refreshes the snapshot and returns its current status. +.ie n .SS "$boolean = $snapshot\->is_public" +.el .SS "\f(CW$boolean\fP = \f(CW$snapshot\fP\->is_public" +.IX Subsection "$boolean = $snapshot->is_public" +Return true if the snapshot's createVolume permissions allow the \*(L"all\*(R" +group to create volumes from the snapshot. +.ie n .SS "$boolean = $snapshot\->make_public($public)" +.el .SS "\f(CW$boolean\fP = \f(CW$snapshot\fP\->make_public($public)" +.IX Subsection "$boolean = $snapshot->make_public($public)" +Modify the createVolumePermission attribute to allow the \*(L"all\*(R" group +to create volumes from this snapshot. Provide a true value to make the +snapshot public, a false one to make it private. +.ie n .SS "@user_ids = $image\->\fIcreateVolumePermissions()\fP" +.el .SS "\f(CW@user_ids\fP = \f(CW$image\fP\->\fIcreateVolumePermissions()\fP" +.IX Subsection "@user_ids = $image->createVolumePermissions()" +.ie n .SS "@user_ids = $image\->authorized_users" +.el .SS "\f(CW@user_ids\fP = \f(CW$image\fP\->authorized_users" +.IX Subsection "@user_ids = $image->authorized_users" +Returns a list of user IDs with createVolume permissions for this +snapshot. The result is a list of VM::EC2::Snapshot::CreateVolumePermission +objects, which interpolate as strings corresponding to either the +user \s-1ID\s0, or the group named \*(L"all.\*(R" +.PP +The two methods are aliases of each other. +.ie n .SS "$boolean = $image\->add_authorized_users($id1,$id2,...)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->add_authorized_users($id1,$id2,...)" +.IX Subsection "$boolean = $image->add_authorized_users($id1,$id2,...)" +.ie n .SS "$boolean = $image\->remove_authorized_users($id1,$id2,...)" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->remove_authorized_users($id1,$id2,...)" +.IX Subsection "$boolean = $image->remove_authorized_users($id1,$id2,...)" +.ie n .SS "$boolean = $image\->reset_authorized_users" +.el .SS "\f(CW$boolean\fP = \f(CW$image\fP\->reset_authorized_users" +.IX Subsection "$boolean = $image->reset_authorized_users" +These methods add and remove user accounts which have createVolume +permissions for the snapshot. The result code indicates whether the +list of user IDs were successfully added or removed. To add the \*(L"all\*(R" +group, use \fImake_public()\fR. +.PP +\&\fIreset_authorized_users()\fR resets the list users authored to create +volumes from this snapshot to empty, effectively granting volume +creation to the owner only. +.PP +See also \fIauthorized_users()\fR. +.ie n .SS "$snap\->refresh" +.el .SS "\f(CW$snap\fP\->refresh" +.IX Subsection "$snap->refresh" +Refreshes the snapshot from information provided by \s-1AWS\s0. Use before +checking progress or other changeable elements. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +snapshotId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Instance +VM::EC2::Volume +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Snapshot::CreateVolumePermission.3pm b/perl/man/man3/VM::EC2::Snapshot::CreateVolumePermission.3pm new file mode 100644 index 0000000..7c31d18 --- /dev/null +++ b/perl/man/man3/VM::EC2::Snapshot::CreateVolumePermission.3pm @@ -0,0 +1,179 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Snapshot::CreateVolumePermission 3pm" +.TH VM::EC2::Snapshot::CreateVolumePermission 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Snapshot::CreateVolumePermission \- Object describing AMI create volume permissions +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $snapshot = $ec2\->describe_snapshots(\*(Aqsnap\-12345\*(Aq); +\& @users = $image\->createVolumePermissions; +\& for (@users) { +\& $group = $_\->group; +\& $user = $_\->userId; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon volume snapshot create volume +permission, and is return by VM::EC2::Snapshot \fIcreateVolumePermissions()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 3 +\& group \-\- Name of a group with launch permissions. Only +\& valid value is "all" +\& userId \-\- Name of a user with launch permissions. +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +userId. If the userId is blank, then interpolates as the group. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Snapshot +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Spot::DatafeedSubscription.3pm b/perl/man/man3/VM::EC2::Spot::DatafeedSubscription.3pm new file mode 100644 index 0000000..a1e1c86 --- /dev/null +++ b/perl/man/man3/VM::EC2::Spot::DatafeedSubscription.3pm @@ -0,0 +1,178 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Spot::DatafeedSubscription 3pm" +.TH VM::EC2::Spot::DatafeedSubscription 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Spot::DatafeedSubscription \- Object describing an Amazon EC2 spot instance datafeed subscription +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& $sub = $ec2\->create_spot_datafeed_subscription(\*(AqmyBucket\*(Aq,\*(AqSPOT:\*(Aq); +\& my $owner = $sub\->ownerId; +\& my $bucket = $sub\->bucket; +\& my $prefix = $sub\->prefix; +\& my $state = $sub\->state; +\& my $error = $sub\->fault; +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 spot instance datafeed subscription, +and is returned by \s-1VM::EC2\-\s0>\fIcreate_spot_datafeed_subscription()\fR and +\&\s-1VM::EC2\-\s0>\fIdescribe_spot_datafeed_subscription()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 7 +\& ownerId \-\- ID of the owner of this subscription +\& bucket \-\- bucket receiving the subscription files +\& prefix \-\- prefix for log files written into the bucket +\& state \-\- state of the subscription; one of \*(AqActive\*(Aq or \*(AqInactive\*(Aq +\& fault \-\- VM::EC2::Error object describing errors in the +\& subscription. +\&=head1 SEE ALSO +.Ve +.PP +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Spot::InstanceRequest.3pm b/perl/man/man3/VM::EC2::Spot::InstanceRequest.3pm new file mode 100644 index 0000000..2ae23d9 --- /dev/null +++ b/perl/man/man3/VM::EC2::Spot::InstanceRequest.3pm @@ -0,0 +1,226 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Spot::InstanceRequest 3pm" +.TH VM::EC2::Spot::InstanceRequest 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Spot::InstanceRequest \- Object describing an Amazon EC2 spot instance request +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 spot instance request, which is +returned by \s-1VM::EC2\-\s0>\fIrequest_spot_instances()\fR and +\&\s-1VM::EC2\-\s0>\fIdescribe_spot_instance_requests()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 1 +\& spotInstanceRequestId \-\- ID of this spot instance request +\& +\& spotPrice \-\- The maximum hourly price for any spot +\& instance launched under this request, +\& in USD. +\& +\& type \-\- The spot instance request type, one of +\& \*(Aqone\-time\*(Aq or \*(Aqpersistent\*(Aq. +\& +\& state \-\- The state of this request, one of \*(Aqopen\*(Aq, +\& \*(Aqclosed\*(Aq, \*(Aqcancelled\*(Aq or \*(Aqfailed\*(Aq. +\& +\& fault \-\- Fault code for the request, if any, an +\& instance of VM::EC2::Error. +\& +\& validFrom \-\- Start date and time of the request. +\& +\& validUntil \-\- Date and time that the request expires. +\& +\& launchGroup \-\- Launch group of the instances run under this request. +\& Instances in the same launch group are launched +\& and terminated together. +\& +\& availabilityZoneGroup \-\- Availability zone group of the instances +\& run under this request. Instances in the same +\& availability zone group will always be launched +\& into the same availability zone. +\& +\& launchSpecification \-\- Additional information for launching +\& instances, represented as a VM::EC2::Spot::LaunchSpecificaton +\& object. +\& +\& instanceId \-\- The instance ID, if an instance has been launched as a +\& result of this request. +\& +\& createTime \-\- The time and date when the spot instance request was +\& created. +\& +\& productDescription \-\- The product description associated with this spot +\& instance request. +.Ve +.SH "Convenience Methods" +.IX Header "Convenience Methods" +This class supports the standard tagging interface. In addition it +provides the following convenience method: +.ie n .SS "$instance = $request\->instance" +.el .SS "\f(CW$instance\fP = \f(CW$request\fP\->instance" +.IX Subsection "$instance = $request->instance" +If an instance was launched as a result of this request, the +\&\fIinstance()\fR method will return the corresponding VM::EC2::Instance +object. +.ie n .SS "$state = $request\->current_status" +.el .SS "\f(CW$state\fP = \f(CW$request\fP\->current_status" +.IX Subsection "$state = $request->current_status" +Refreshes the request information and returns its state, such as \*(L"open\*(R". +.ie n .SS "$request\->refresh" +.el .SS "\f(CW$request\fP\->refresh" +.IX Subsection "$request->refresh" +Refreshes the request information. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Spot::LaunchSpecification +VM::EC2::Error +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Spot::PriceHistory.3pm b/perl/man/man3/VM::EC2::Spot::PriceHistory.3pm new file mode 100644 index 0000000..0dbccf5 --- /dev/null +++ b/perl/man/man3/VM::EC2::Spot::PriceHistory.3pm @@ -0,0 +1,184 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Spot::PriceHistory 3pm" +.TH VM::EC2::Spot::PriceHistory 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Spot::PriceHistory \- Object describing an Amazon EC2 spot instance price history record +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& +\& my @history = $ec2\->describe_spot_price_history(\-start_time => \*(Aq2011\-09\-01T00:00:00\*(Aq, +\& \-end_time => \*(Aq2011\-09\-05T00:00:00\*(Aq, +\& \-availability_zone => \*(Aqus\-east\-1a\*(Aq, +\& \-instance_type => \*(Aqm1.small\*(Aq, +\& \-filter => {\*(Aqproduct\-description\*(Aq=>\*(Aq*Linux*\*(Aq}, +\& } or die $ec2\->error_str; +\& for my $h (@history) { +\& print join("\et",$h\->timestamp, +\& $h\->spot_price, +\& $h\->instanceType, +\& $h\->productDescription, +\& $h\->availability_zone),"\en"; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object represents an Amazon \s-1EC2\s0 spot instance price history record, +and is returned by \s-1VM::EC2\-\s0>\fIdescribe_spot_price_history()\fR. +.SH "METHODS" +.IX Header "METHODS" +These object methods are supported: +.PP +.Vb 5 +\& instanceType \-\- Instance type, e.g. \*(Aqm1.small\*(Aq +\& productDescription \-\- Product description, e.g. "windows" +\& spotPrice \-\- Price, in dollars per run\-hour. +\& timestamp \-\- Timestamp of data point, in format yyyy\-mm\-ddThh:mm:ss.000Z +\& availabilityZone \-\- Availability zone of spot instance. +.Ve +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Tag.3pm b/perl/man/man3/VM::EC2::Tag.3pm new file mode 100644 index 0000000..b985d63 --- /dev/null +++ b/perl/man/man3/VM::EC2::Tag.3pm @@ -0,0 +1,187 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Tag 3pm" +.TH VM::EC2::Tag 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Tag \-\- Object describing a tagged Amazon EC2 resource +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @tags = $ec2\->describe_tags(\-filter=> {\*(Aqresource\-type\*(Aq=>\*(Aqvolume\*(Aq}); +\& for my $t (@tags) { +\& $id = $t\->resourceId; +\& $type = $t\->resourceType; +\& $key = $t\->key; +\& $value = $t\->value; +\& } +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe an Amazon \s-1EC2\s0 tag. Each object +contains information about the resource it is tagging, the tag key, +and the tag value. Tags are returned by the \s-1VM::EC2\-\s0>\fIdescribe_tags()\fR +method. +.PP +In most cases you will not want to work with this object directly, but +instead read tags by calling a resource object's \fItags()\fR method, which +returns a hash of key value pairs, or specify particular tag values as +one of the filters in a describe_*() call. +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 4 +\& resourceId \-\- The ID of the resource being tagged. +\& resourceType \-\- The type of the resource being tagged e.g. "image" +\& key \-\- The tag key. +\& value \-\- The tag value. +.Ve +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +resourceId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/man/man3/VM::EC2::Volume.3pm b/perl/man/man3/VM::EC2::Volume.3pm new file mode 100644 index 0000000..72d2322 --- /dev/null +++ b/perl/man/man3/VM::EC2::Volume.3pm @@ -0,0 +1,304 @@ +.\" Automatically generated by Pod::Man 2.22 (Pod::Simple 3.07) +.\" +.\" Standard preamble: +.\" ======================================================================== +.de Sp \" Vertical space (when we can't use .PP) +.if t .sp .5v +.if n .sp +.. +.de Vb \" Begin verbatim text +.ft CW +.nf +.ne \\$1 +.. +.de Ve \" End verbatim text +.ft R +.fi +.. +.\" Set up some character translations and predefined strings. \*(-- will +.\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left +.\" double quote, and \*(R" will give a right double quote. \*(C+ will +.\" give a nicer C++. Capital omega is used to do unbreakable dashes and +.\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, +.\" nothing in troff, for use with C<>. +.tr \(*W- +.ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' +.ie n \{\ +. ds -- \(*W- +. ds PI pi +. if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch +. if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch +. ds L" "" +. ds R" "" +. ds C` "" +. ds C' "" +'br\} +.el\{\ +. ds -- \|\(em\| +. ds PI \(*p +. ds L" `` +. ds R" '' +'br\} +.\" +.\" Escape single quotes in literal strings from groff's Unicode transform. +.ie \n(.g .ds Aq \(aq +.el .ds Aq ' +.\" +.\" If the F register is turned on, we'll generate index entries on stderr for +.\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index +.\" entries marked with X<> in POD. Of course, you'll have to process the +.\" output yourself in some meaningful fashion. +.ie \nF \{\ +. de IX +. tm Index:\\$1\t\\n%\t"\\$2" +.. +. nr % 0 +. rr F +.\} +.el \{\ +. de IX +.. +.\} +.\" +.\" Accent mark definitions (@(#)ms.acc 1.5 88/02/08 SMI; from UCB 4.2). +.\" Fear. Run. Save yourself. No user-serviceable parts. +. \" fudge factors for nroff and troff +.if n \{\ +. ds #H 0 +. ds #V .8m +. ds #F .3m +. ds #[ \f1 +. ds #] \fP +.\} +.if t \{\ +. ds #H ((1u-(\\\\n(.fu%2u))*.13m) +. ds #V .6m +. ds #F 0 +. ds #[ \& +. ds #] \& +.\} +. \" simple accents for nroff and troff +.if n \{\ +. ds ' \& +. ds ` \& +. ds ^ \& +. ds , \& +. ds ~ ~ +. ds / +.\} +.if t \{\ +. ds ' \\k:\h'-(\\n(.wu*8/10-\*(#H)'\'\h"|\\n:u" +. ds ` \\k:\h'-(\\n(.wu*8/10-\*(#H)'\`\h'|\\n:u' +. ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'^\h'|\\n:u' +. ds , \\k:\h'-(\\n(.wu*8/10)',\h'|\\n:u' +. ds ~ \\k:\h'-(\\n(.wu-\*(#H-.1m)'~\h'|\\n:u' +. ds / \\k:\h'-(\\n(.wu*8/10-\*(#H)'\z\(sl\h'|\\n:u' +.\} +. \" troff and (daisy-wheel) nroff accents +.ds : \\k:\h'-(\\n(.wu*8/10-\*(#H+.1m+\*(#F)'\v'-\*(#V'\z.\h'.2m+\*(#F'.\h'|\\n:u'\v'\*(#V' +.ds 8 \h'\*(#H'\(*b\h'-\*(#H' +.ds o \\k:\h'-(\\n(.wu+\w'\(de'u-\*(#H)/2u'\v'-.3n'\*(#[\z\(de\v'.3n'\h'|\\n:u'\*(#] +.ds d- \h'\*(#H'\(pd\h'-\w'~'u'\v'-.25m'\f2\(hy\fP\v'.25m'\h'-\*(#H' +.ds D- D\\k:\h'-\w'D'u'\v'-.11m'\z\(hy\v'.11m'\h'|\\n:u' +.ds th \*(#[\v'.3m'\s+1I\s-1\v'-.3m'\h'-(\w'I'u*2/3)'\s-1o\s+1\*(#] +.ds Th \*(#[\s+2I\s-2\h'-\w'I'u*3/5'\v'-.3m'o\v'.3m'\*(#] +.ds ae a\h'-(\w'a'u*4/10)'e +.ds Ae A\h'-(\w'A'u*4/10)'E +. \" corrections for vroff +.if v .ds ~ \\k:\h'-(\\n(.wu*9/10-\*(#H)'\s-2\u~\d\s+2\h'|\\n:u' +.if v .ds ^ \\k:\h'-(\\n(.wu*10/11-\*(#H)'\v'-.4m'^\v'.4m'\h'|\\n:u' +. \" for low resolution devices (crt and lpr) +.if \n(.H>23 .if \n(.V>19 \ +\{\ +. ds : e +. ds 8 ss +. ds o a +. ds d- d\h'-1'\(ga +. ds D- D\h'-1'\(hy +. ds th \o'bp' +. ds Th \o'LP' +. ds ae ae +. ds Ae AE +.\} +.rm #[ #] #H #V #F C +.\" ======================================================================== +.\" +.IX Title "VM::EC2::Volume 3pm" +.TH VM::EC2::Volume 3pm "2011-09-26" "perl v5.10.1" "User Contributed Perl Documentation" +.\" For nroff, turn off justification. Always turn off hyphenation; it makes +.\" way too many mistakes in technical documents. +.if n .ad l +.nh +.SH "NAME" +VM::EC2::Volume \- Object describing an Amazon EBS volume +.SH "SYNOPSIS" +.IX Header "SYNOPSIS" +.Vb 1 +\& use VM::EC2; +\& +\& $ec2 = VM::EC2\->new(...); +\& @vol = $ec2\->describe_volumes; +\& for my $vol (@vols) { +\& $id = $vol\->volumeId; +\& $size = $vol\->size; +\& $snap = $vol\->snapshotId; +\& $zone = $vol\->availabilityZone; +\& $status = $vol\->status; +\& $ctime = $vol\->createTime; +\& @attachments = $vol\->attachments; +\& $attachment = $vol\->attachment; +\& $origin = $vol\->from_snapshot; +\& @snapshots = $vol\->to_snapshots; +\& } +\& $vols[0]\->attach(\*(Aqi\-12345\*(Aq,\*(Aq/dev/sdg1\*(Aq); +\& $vols[0]\->deleteOnTermination(\*(Aqtrue\*(Aq); +\& $vols[0]\->detach; +\& $vols[0]\->create_snapshot(\*(Aqautomatic snapshot\*(Aq) +.Ve +.SH "DESCRIPTION" +.IX Header "DESCRIPTION" +This object is used to describe an Amazon \s-1EBS\s0 volume. It is returned +by \s-1VM::EC2\-\s0>\fIdescribe_volumes()\fR. +.SH "METHODS" +.IX Header "METHODS" +The following object methods are supported: +.PP +.Vb 9 +\& volumeId \-\- ID of this volume. +\& size \-\- Size of this volume (in GB). +\& snapshotId \-\- ID of snapshot this +\& availabilityZone \-\- Availability zone in which this volume resides. +\& status \-\- Volume state, one of "creating", "available", +\& "in\-use", "deleting", "deleted", "error" +\& createTime \-\- Timestamp for when volume was created. +\& tags \-\- Hashref containing tags associated with this group. +\& See L. +.Ve +.PP +In addition, this class provides several convenience functions: +.ie n .SS "$attachment = $vol\->attachment" +.el .SS "\f(CW$attachment\fP = \f(CW$vol\fP\->attachment" +.IX Subsection "$attachment = $vol->attachment" +.ie n .SS "@attachments = $vol\->attachments" +.el .SS "\f(CW@attachments\fP = \f(CW$vol\fP\->attachments" +.IX Subsection "@attachments = $vol->attachments" +The \fIattachment()\fR method returns a +VM::EC2::BlockDevice::Attachment object describing the +attachment of this volume to an instance. If the volume is unused, +then this returns undef. +.PP +The \fIattachments()\fR method is similar, except that it returns a list of +the attachments. Currently an \s-1EBS\s0 volume can only be attached to one +instance at a time, but the Amazon call syntax supports multiple +attachments and this method is provided for future compatibility. +.ie n .SS "$attachment = $vol\->attach($instance,$device)" +.el .SS "\f(CW$attachment\fP = \f(CW$vol\fP\->attach($instance,$device)" +.IX Subsection "$attachment = $vol->attach($instance,$device)" +.ie n .SS "$attachment = $vol\->attach(\-instance_id=>$instance,\-device=>$device)" +.el .SS "\f(CW$attachment\fP = \f(CW$vol\fP\->attach(\-instance_id=>$instance,\-device=>$device)" +.IX Subsection "$attachment = $vol->attach(-instance_id=>$instance,-device=>$device)" +Attach this volume to an instance using virtual device \f(CW$device\fR. Both +arguments are required. The result is a +VM::EC2::BlockDevice::Attachment object which you can monitor by +calling \fIcurrent_status()\fR: +.PP +.Vb 5 +\& my $a = $volume\->attach(\*(Aqi\-12345\*(Aq,\*(Aq/dev/sdg\*(Aq); +\& while ($a\->current_status ne \*(Aqattached\*(Aq) { +\& sleep 2; +\& } +\& print "volume is ready to go\en"; +.Ve +.ie n .SS "$attachment = $volume\->\fIdetach()\fP" +.el .SS "\f(CW$attachment\fP = \f(CW$volume\fP\->\fIdetach()\fP" +.IX Subsection "$attachment = $volume->detach()" +.ie n .SS "$attachment = $volume\->detach(\-instance_id=>$instance_id, \-device=>$device, \-force=>$force);" +.el .SS "\f(CW$attachment\fP = \f(CW$volume\fP\->detach(\-instance_id=>$instance_id, \-device=>$device, \-force=>$force);" +.IX Subsection "$attachment = $volume->detach(-instance_id=>$instance_id, -device=>$device, -force=>$force);" +Detaches this volume. With no arguments, will detach the volume from +whatever instance it is currently attached to. Provide \-instance_id +and/or \-device as a check that you are detaching the volume from the +expected instance and device. +.PP +Optional arguments: +.PP +.Vb 4 +\& \-instance_id \-\- ID of the instance to detach from. +\& \-device \-\- How the device is exposed to the instance. +\& \-force \-\- Force detachment, even if previous attempts were +\& unsuccessful. +.Ve +.PP +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling \fIcurrent_status()\fR: +.PP +.Vb 5 +\& my $a = $volume\->detach; +\& while ($a\->current_status ne \*(Aqdetached\*(Aq) { +\& sleep 2; +\& } +\& print "volume is ready to go\en"; +.Ve +.ie n .SS "$boolean = $vol\->deleteOnTermination([$boolean])" +.el .SS "\f(CW$boolean\fP = \f(CW$vol\fP\->deleteOnTermination([$boolean])" +.IX Subsection "$boolean = $vol->deleteOnTermination([$boolean])" +Get or set the deleteOnTermination flag for attached volumes. If the volume +is unattached, then this causes a fatal error. Called with no arguments, this +method returns the current state of the deleteOnTermination flag for the +volume's attachment. Called with a true/false argument, the method sets the +flag by calling \fImodify_instance_attributes()\fR on the corresponding instance +and returns true if successful. +.ie n .SS "$snap = $vol\->from_snapshot" +.el .SS "\f(CW$snap\fP = \f(CW$vol\fP\->from_snapshot" +.IX Subsection "$snap = $vol->from_snapshot" +Returns the VM::EC2::Snapshot object that this volume was +originally derived from. It will return undef if the resource no +longer exists, or if the volume was created from scratch. +.ie n .SS "@snap = $vol\->to_snapshots" +.el .SS "\f(CW@snap\fP = \f(CW$vol\fP\->to_snapshots" +.IX Subsection "@snap = $vol->to_snapshots" +If this volume has been used to create one or more snapshots, this +method will return them as a list of VM::EC2::Snapshot objects. +.ie n .SS "$snapshot = $vol\->create_snapshot('Description')" +.el .SS "\f(CW$snapshot\fP = \f(CW$vol\fP\->create_snapshot('Description')" +.IX Subsection "$snapshot = $vol->create_snapshot('Description')" +Create a snapshot of the volume and return a VM::EC2::Snapshot +object. To ensure a consistent snapshot, you should unmount the volume +before snapshotting it. The optional argument allows you to add a description to the snapshot. +.PP +Here is an example: +.PP +.Vb 5 +\& $s = $volume\->create_snapshot("Backed up at ".localtime); +\& while ($s\->current_status eq \*(Aqpending\*(Aq) { +\& print "Progress: ",$s\->progress,"% done\en"; +\& } +\& print "Snapshot status: ",$s\->current_status,"\en"; +.Ve +.ie n .SS "$status = $vol\->current_status" +.el .SS "\f(CW$status\fP = \f(CW$vol\fP\->current_status" +.IX Subsection "$status = $vol->current_status" +This returns the up-to-date status of the volume. It works by calling +\&\fIrefresh()\fR and then returning \fIstatus()\fR. +.SH "STRING OVERLOADING" +.IX Header "STRING OVERLOADING" +When used in a string context, this object will interpolate the +volumeId. +.SH "SEE ALSO" +.IX Header "SEE ALSO" +\&\s-1VM::EC2\s0 +VM::EC2::Generic +VM::EC2::Snapshot +VM::EC2::BlockDevice +VM::EC2::BlockDevice::Attachment +.SH "AUTHOR" +.IX Header "AUTHOR" +Lincoln Stein . +.PP +Copyright (c) 2011 Ontario Institute for Cancer Research +.PP +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the \s-1GPL\s0 (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to \s-1LICENSE\s0 for the full license text. In addition, +please see \s-1DISCLAIMER\s0.txt for disclaimers of warranty. diff --git a/perl/share/perl/5.10.1/VM/EC2.pm b/perl/share/perl/5.10.1/VM/EC2.pm new file mode 100644 index 0000000..a7dfb62 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2.pm @@ -0,0 +1,3643 @@ +package VM::EC2; + +=head1 NAME + +VM::EC2 - Control the Amazon EC2 and Eucalyptus Clouds + +=head1 SYNOPSIS + + # set environment variables EC2_ACCESS_KEY, EC2_SECRET_KEY and/or EC2_URL + # to fill in arguments automatically + + ## IMAGE AND INSTANCE MANAGEMENT + # get new EC2 object + my $ec2 = VM::EC2->new(-access_key => 'access key id', + -secret_key => 'aws_secret_key', + -endpoint => 'http://ec2.amazonaws.com'); + + # fetch an image by its ID + my $image = $ec2->describe_images('ami-12345'); + + # get some information about the image + my $architecture = $image->architecture; + my $description = $image->description; + my @devices = $image->blockDeviceMapping; + for my $d (@devices) { + print $d->deviceName,"\n"; + print $d->snapshotId,"\n"; + print $d->volumeSize,"\n"; + } + + # run two instances + my @instances = $image->run_instances(-key_name =>'My_key', + -security_group=>'default', + -min_count =>2, + -instance_type => 't1.micro') + or die $ec2->error_str; + + # wait for both instances to reach "running" or other terminal state + $ec2->wait_for_instances(@instances); + + # print out both instance's current state and DNS name + for my $i (@instances) { + my $status = $i->current_status; + my $dns = $i->dnsName; + print "$i: [$status] $dns\n"; + } + + # tag both instances with Role "server" + foreach (@instances) {$_->add_tag(Role=>'server'); + + # stop both instances + foreach (@instances) {$_->stop} + + # find instances tagged with Role=Server that are + # stopped, change the user data and restart. + @instances = $ec2->describe_instances({'tag:Role' => 'Server', + 'run-state-name' => 'stopped'}); + for my $i (@instances) { + $i->userData('Secure-mode: off'); + $i->start or warn "Couldn't start $i: ",$i->error_str; + } + + # create an image from both instance, tag them, and make + # them public + for my $i (@instances) { + my $img = $i->create_image("Autoimage from $i","Test image"); + $img->add_tags(Name => "Autoimage from $i", + Role => 'Server', + Status=> 'Production'); + $img->make_public(1); + } + + ## KEY MANAGEMENT + + # retrieve the name and fingerprint of the first instance's + # key pair + my $kp = $instances[0]->keyPair; + print $instances[0], ": keypair $kp=",$kp->fingerprint,"\n"; + + # create a new key pair + $kp = $ec2->create_key_pair('My Key'); + + # get the private key from this key pair and write it to a disk file + # in ssh-compatible format + my $private_key = $kp->private_key; + open (my $f,'>MyKeypair.rsa') or die $!; + print $f $private_key; + close $f; + + # Import a preexisting SSH key + my $public_key = 'ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQC8o...'; + $key = $ec2->import_key_pair('NewKey',$public_key); + + ## SECURITY GROUPS AND FIREWALL RULES + # Create a new security group + my $group = $ec2->create_security_group(-name => 'NewGroup', + -description => 'example'); + + # Add a firewall rule + $group->authorize_incoming(-protocol => 'tcp', + -port => 80, + -source_ip => ['192.168.2.0/24','192.168.2.1/24'}); + + # Write rules back to Amazon + $group->update; + + # Print current firewall rules + print join ("\n",$group->ipPermissions),"\n"; + + ## VOLUME && SNAPSHOT MANAGEMENT + + # find existing volumes that are available + my @volumes = $ec2->describe_volumes({status=>'available'}); + + # back 'em all up to snapshots + foreach (@volumes) {$_->snapshot('Backup on '.localtime)} + + # find a stopped instance in first volume's availability zone and + # attach the volume to the instance using /dev/sdg + my $vol = $volumes[0]; + my $zone = $vol->availabilityZone; + @instances = $ec2->describe_instances({'availability-zone'=> $zone, + 'run-state-name' => $stopped); + $instances[0]->attach_volume($vol=>'/dev/sdg') if @instances; + + # create a new 20 gig volume + $vol = $ec2->create_volume(-availability_zone=> 'us-east-1a', + -size => 20); + $ec2->wait_for_volumes($vol); + print "Volume $vol is ready!\n" if $vol->current_status eq 'available'; + + # create a new elastic address and associate it with an instance + my $address = $ec2->allocate_address(); + $instances[0]->associate_address($address); + +=head1 DESCRIPTION + +This is an interface to the 2011-05-15 version of the Amazon AWS API +(http://aws.amazon.com/ec2). It was written provide access to the new +tag and metadata interface that is not currently supported by +Net::Amazon::EC2, as well as to provide developers with an extension +mechanism for the API. This library will also support the Eucalyptus +open source cloud (http://open.eucalyptus.com). + +The main interface is the VM::EC2 object, which provides methods for +interrogating the Amazon EC2, launching instances, and managing +instance lifecycle. These methods return the following major object +classes which act as specialized interfaces to AWS: + + VM::EC2::BlockDevice -- A block device + VM::EC2::BlockDevice::Attachment -- Attachment of a block device to an EC2 instance + VM::EC2::BlockDevice::EBS -- An elastic block device + VM::EC2::BlockDevice::Mapping -- Mapping of a virtual storage device to a block device + VM::EC2::BlockDevice::Mapping::EBS -- Mapping of a virtual storage device to an EBS block device + VM::EC2::Group -- Security groups + VM::EC2::Image -- Amazon Machine Images (AMIs) + VM::EC2::Instance -- Virtual machine instances + VM::EC2::Instance::Metadata -- Access to runtime metadata from running instances + VM::EC2::Region -- Availability regions + VM::EC2::Snapshot -- EBS snapshots + VM::EC2::Tag -- Metadata tags + +In addition, there are several utility classes: + + VM::EC2::Generic -- Base class for all AWS objects + VM::EC2::Error -- Error messages + VM::EC2::Dispatch -- Maps AWS XML responses onto perl object classes + VM::EC2::ReservationSet -- Hidden class used for describe_instances() request; + The reservation Ids are copied into the Instance + object. + +The interface provided by these modules is based on that described at +http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/. The +following caveats apply: + + 1) Not all of the Amazon API is currently implemented. Specifically, + calls dealing with Virtual Private Clouds (VPC), cluster management, + and spot instances are not currently supported. + See L for a list of all the unimplemented API calls. + + 2) For consistency with common Perl coding practices, method calls + are lowercase and words in long method names are separated by + underscores. The Amazon API prefers mixed case. So in the Amazon + API the call to fetch instance information is "DescribeInstances", + while in VM::EC2, the method is "describe_instances". To avoid + annoyance, if you use the mixed case form for a method name, the + Perl autoloader will automatically translate it to underscores for + you, and vice-versa; this means you can call either + $ec2->describe_instances() or $ec2->DescribeInstances(). + + 3) Named arguments passed to methods are all lowercase, use + underscores to separate words and start with hyphens. + In other words, if the AWS API calls for an argument named + "InstanceId" to be passed to the "DescribeInstances" call, then + the corresponding Perl function will look like: + + $instance = $ec2->describe_instances(-instance_id=>'i-12345') + + In most cases automatic case translation will be performed for you + on arguments. So in the previous example, you could use + -InstanceId as well as -instance_id. The exception + is when an absurdly long argument name was replaced with an + abbreviated one as described below. In this case, you must use + the documented argument name. + + In a small number of cases, when the parameter name was absurdly + long, it has been abbreviated. For example, the + "Placement.AvailabilityZone" parameter has been represented as + -placement_zone and not -placement_availability_zone. See the + documentation for these cases. + + 4) For each of the describe_foo() methods (where "foo" is a type of + resource such as "instance"), you can fetch the resource by using + their IDs either with the long form: + + $ec2->describe_foo(-foo_id=>['a','b','c']), + + or a shortcut form: + + $ec2->describe_foo('a','b','c'); + + 5) When the API calls for a list of arguments named Arg.1, Arg.2, + then the Perl interface allows you to use an anonymous array for + the consecutive values. For example to call describe_instances() + with multiple instance IDs, use: + + @i = $ec2->describe_instances(-instance_id=>['i-12345','i-87654']) + + 6) All Filter arguments are represented as a -filter argument whose value is + an anonymous hash: + + @i = $ec2->describe_instances(-filter=>{architecture=>'i386', + 'tag:Name' =>'WebServer'}) + + If there are no other arguments you wish to pass, you can omit the + -filter argument and just pass a hashref: + + @i = $ec2->describe_instances({architecture=>'i386', + 'tag:Name' =>'WebServer'}) + + For any filter, you may represent multiple OR arguments as an arrayref: + + @i = $ec2->describe-instances({'instance-state-name'=>['stopped','terminated']}) + + When adding or removing tags, the -tag argument uses the same syntax. + + 7) The tagnames of each XML object returned from AWS are converted into methods + with the same name and typography. So the tag in a + DescribeInstancesResponse, becomes: + + $instance->privateIpAddress + + You can also use the more Perlish form -- this is equivalent: + + $instance->private_ip_address + + Methods that correspond to complex objects in the XML hierarchy + return the appropriate Perl object. For example, an instance's + blockDeviceMapping() method returns an object of type + VM::EC2::BlockDevice::Mapping. + + All objects have a fields() method that will return the XML + tagnames listed in the AWS specifications. + + @fields = sort $instance->fields; + # 'amiLaunchIndex', 'architecture', 'blockDeviceMapping', ... + + 8) Whenever an object has a unique ID, string overloading is used so that + the object interpolates the ID into the string. For example, when you + print a VM::EC2::Volume object, or use it in another string context, + then it will appear as the string "vol-123456". Nevertheless, it will + continue to be usable for method calls. + + ($v) = $ec2->describe_volumes(); + print $v,"\n"; # prints as "vol-123456" + $zone = $v->availabilityZone; # acts like an object + + 9) Many objects have convenience methods that invoke the AWS API on your + behalf. For example, instance objects have a current_status() method that returns + the run status of the object, as well as start(), stop() and terminate() + methods that control the instance's lifecycle. + + if ($instance->current_status eq 'running') { + $instance->stop; + } + + 10) Calls to AWS that have failed for one reason or another (invalid + parameters, communications problems, service interruptions) will + return undef and set the VM::EC2->is_error() method to true. The + error message and its code can then be recovered by calling + VM::EC2->error. + + $i = $ec2->describe_instance('i-123456'); + unless ($i) { + warn 'Got no instance. Message was: ',$ec2->error; + } + + You may also elect to raise an exception when an error occurs. + See the new() method for details. + +=head1 CORE METHODS + +This section describes the VM::EC2 constructor, accessor methods, and +methods relevant to error handling. + +=cut + +use strict; +use LWP::UserAgent; +use HTTP::Request::Common; +use MIME::Base64 qw(encode_base64 decode_base64); +use Digest::SHA qw(hmac_sha256 sha1_hex); +use POSIX 'strftime'; +use URI; +use URI::Escape; +use VM::EC2::Dispatch; +use VM::EC2::Error; +use Carp 'croak','carp'; + +our $VERSION = '1.07'; +our $AUTOLOAD; +our @CARP_NOT = qw(VM::EC2::Image VM::EC2::Volume + VM::EC2::Snapshot VM::EC2::Instance + VM::EC2::ReservedInstance); + +# hard-coded timeout for several wait_for_terminal_state() calls. +use constant WAIT_FOR_TIMEOUT => 600; + +sub AUTOLOAD { + my $self = shift; + my ($pack,$func_name) = $AUTOLOAD=~/(.+)::([^:]+)$/; + return if $func_name eq 'DESTROY'; + my $proper = VM::EC2->canonicalize($func_name); + $proper =~ s/^-//; + if ($self->can($proper)) { + eval "sub $pack\:\:$func_name {shift->$proper(\@_)}"; + $self->$func_name(@_); + } else { + croak "Can't locate object method \"$func_name\" via package \"$pack\""; + } +} + + +=head2 $ec2 = VM::EC2->new(-access_key=>$id,-secret_key=>$key,-endpoint=>$url) + +Create a new Amazon access object. Required parameters are: + + -access_key Access ID for an authorized user + + -secret_key Secret key corresponding to the Access ID + + -endpoint The URL for making API requests + + -raise_error If true, throw an exception. + + -print_error If true, print errors to STDERR. + +One or more of -access_key, -secret_key and -endpoint can be omitted +if the environment variables EC2_ACCESS_KEY, EC2_SECRET_KEY and +EC2_URL are defined. + +To use a Eucalyptus cloud, please provide the appropriate endpoint +URL. + +By default, when the Amazon API reports an error, such as attempting +to perform an invalid operation on an instance, the corresponding +method will return empty and the error message can be recovered from +$ec2->error(). However, if you pass -raise_error=>1 to new(), the module +will instead raise a fatal error, which you can trap with eval{} and +report with $@: + + eval { + $ec2->some_dangerous_operation(); + $ec2->another_dangerous_operation(); + }; + print STDERR "something bad happened: $@" if $@; + +The error object can be retrieved with $ec2->error() as before. + +=cut + +sub new { + my $self = shift; + my %args = @_; + my $id = $args{-access_key} || $ENV{EC2_ACCESS_KEY} + or croak "Please provide AccessKey parameter or define environment variable EC2_ACCESS_KEY"; + my $secret = $args{-secret_key} || $ENV{EC2_SECRET_KEY} + or croak "Please provide SecretKey parameter or define environment variable EC2_SECRET_KEY"; + my $endpoint_url = $args{-endpoint} || $ENV{EC2_URL} || 'http://ec2.amazonaws.com/'; + $endpoint_url .= '/' unless $endpoint_url =~ m!/$!; + + my $raise_error = $args{-raise_error}; + my $print_error = $args{-print_error}; + return bless { + id => $id, + secret => $secret, + endpoint => $endpoint_url, + idempotent_seed => sha1_hex(rand()), + raise_error => $raise_error, + print_error => $print_error, + },ref $self || $self; +} + +=head2 $access_key = $ec2->access_key(<$new_access_key>) + +Get or set the ACCESS KEY + +=cut + +sub access_key {shift->id(@_)} + +sub id { + my $self = shift; + my $d = $self->{id}; + $self->{id} = shift if @_; + $d; +} + +=head2 $secret = $ec2->secret(<$new_secret>) + +Get or set the SECRET KEY + +=cut + +sub secret { + my $self = shift; + my $d = $self->{secret}; + $self->{secret} = shift if @_; + $d; +} + +=head2 $endpoint = $ec2->endpoint(<$new_endpoint>) + +Get or set the ENDPOINT URL. + +=cut + +sub endpoint { + my $self = shift; + my $d = $self->{endpoint}; + $self->{endpoint} = shift if @_; + $d; + } + +=head2 $ec2->raise_error($boolean) + +Change the handling of error conditions. Pass a true value to cause +Amazon API errors to raise a fatal error. Pass false to make methods +return undef. In either case, you can detect the error condition +by calling is_error() and fetch the error message using error(). This +method will also return the current state of the raise error flag. + +=cut + +sub raise_error { + my $self = shift; + my $d = $self->{raise_error}; + $self->{raise_error} = shift if @_; + $d; +} + +=head2 $ec2->print_error($boolean) + +Change the handling of error conditions. Pass a true value to cause +Amazon API errors to print error messages to STDERR. Pass false to +cancel this behavior. + +=cut + +sub print_error { + my $self = shift; + my $d = $self->{print_error}; + $self->{print_error} = shift if @_; + $d; +} + +=head2 $boolean = $ec2->is_error + +If a method fails, it will return undef. However, some methods, such +as describe_images(), will also return undef if no resources matches +your search criteria. Call is_error() to distinguish the two +eventualities: + + @images = $ec2->describe_images(-owner=>'29731912785'); + unless (@images) { + die "Error: ",$ec2->error if $ec2->is_error; + print "No appropriate images found\n"; + } + +=cut + +sub is_error { + defined shift->error(); +} + +=head2 $err = $ec2->error + +If the most recently-executed method failed, $ec2->error() will return +the error code and other descriptive information. This method will +return undef if the most recently executed method was successful. + +The returned object is actually an AWS::Error object, which +has two methods named code() and message(). If used in a string +context, its operator overloading returns the composite string +"$message [$code]". + +=cut + +sub error { + my $self = shift; + my $d = $self->{error}; + $self->{error} = shift if @_; + $d; +} + +=head2 $err = $ec2->error_str + +Same as error() except it returns the string representation, not the +object. This works better in debuggers and exception handlers. + +=cut + +sub error_str { + my $e = shift->{error}; + $e ||= ''; + return "$e"; +} + +=head1 EC2 REGIONS AND AVAILABILITY ZONES + +This section describes methods that allow you to fetch information on +EC2 regions and availability zones. These methods return objects of +type L and L. + +=head2 @regions = $ec2->describe_regions(-region_name=>\@list) + +=head2 @regionss = $ec2->describe_regions(@list) + +Describe regions and return a list of VM::EC2::Region objects. Call +with no arguments to return all regions. You may provide a list of +regions in either of the two forms shown above in order to restrict +the list returned. Glob-style wildcards, such as "*east") are allowed. + +=cut + +sub describe_regions { + my $self = shift; + my %args = $self->args('-region_name',@_); + my @params = $self->list_parm('RegionName',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeRegions',@params); +} + +=head2 @zones = $ec2->describe_availability_zones(-zone_name=>\@names,-filter=>\%filters) + +=head2 @zones = $ec2->describe_availability_zones(@names) + +Describe availability zones and return a list of +VM::EC2::AvailabilityZone objects. Call with no arguments to return +all availability regions. You may provide a list of zones in either +of the two forms shown above in order to restrict the list +returned. Glob-style wildcards, such as "*east") are allowed. + +If you provide a single argument consisting of a hashref, it is +treated as a -filter argument. In other words: + + $ec2->describe_availability_zones({state=>'available'}) + +is equivalent to + + $ec2->describe_availability_zones(-filter=>{state=>'available'}) + +Availability zone filters are described at +http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/ApiReference-query-DescribeAvailabilityZones.html + +=cut + +sub describe_availability_zones { + my $self = shift; + my %args = $self->args('-zone_name',@_); + my @params = $self->list_parm('ZoneName',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeAvailabilityZones',@params); +} + +=head1 EC2 INSTANCES + +The methods in this section allow you to retrieve information about +EC2 instances, launch new instances, control the instance lifecycle +(e.g. starting and stopping them), and fetching the console output +from instances. + +The primary object manipulated by these methods is +L. Please see the L manual page +for additional methods that allow you to attach and detach volumes, +modify an instance's attributes, and convert instances into images. + +=head2 @instances = $ec2->describe_instances(-instance_id=>\@ids,-filter=>\%filters) + +=head2 @instances = $ec2->describe_instances(@instance_ids) + +=head2 @instances = $ec2->describe_instances(\%filters) + +Return a series of VM::EC2::Instance objects. Optional parameters are: + + -instance_id ID of the instance(s) to return information on. + This can be a string scalar, or an arrayref. + + -filter Tags and other filters to apply. + +The filter argument is a hashreference in which the keys are the +filter names, and the values are the match strings. Some filters +accept wildcards. + +A typical filter example: + + $ec2->describe_instances( + -filter => {'block-device-mapping.device-name'=>'/dev/sdh', + 'architecture' => 'i386', + 'tag:Role' => 'Server' + }); + +You may omit the -filter argument name if there are no other arguments: + + $ec2->describe_instances({'block-device-mapping.device-name'=>'/dev/sdh', + 'architecture' => 'i386', + 'tag:Role' => 'Server'}); + +There are a large number of potential filters, which are listed at +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeInstances.html. + +Note that the objects returned from this method are the instances +themselves, and not a reservation set. The reservation ID can be +retrieved from each instance by calling its reservationId() method. + +=cut + +sub describe_instances { + my $self = shift; + my %args = $self->args('-instance_id',@_); + my @params = $self->list_parm('InstanceId',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeInstances',@params); +} + +=head2 @i = $ec2->run_instances(%param) + +This method will provision and launch one or more instances given an +AMI ID. If successful, the method returns a series of +VM::EC2::Instance objects. + +=over 4 + +=item Required parameters: + + -image_id ID of an AMI to launch + +=item Optional parameters: + + -min_count Minimum number of instances to launch [1] + -max_count Maximum number of instances to launch [1] + -key_name Name of the keypair to use + -security_group_id Security group ID to use for this instance. + Use an arrayref for multiple group IDs + -security_group Security group name to use for this instance. + Use an arrayref for multiple values. + -user_data User data to pass to the instances. Do NOT base64 + encode this. It will be done for you. + -instance_type Type of the instance to use. See below for a + list. + -availability_zone The availability zone you want to launch the + instance into. Call $ec2->regions for a list. + -zone Short version of -availability_aone. + -placement_zone Deprecated version of -availability_zone. + -placement_group An existing placement group to launch the + instance into. Applicable to cluster instances + only. + -placement_tenancy Specify 'dedicated' to launch the instance on a + dedicated server. Only applicable for VPC + instances. + -kernel_id ID of the kernel to use for the instances, + overriding the kernel specified in the image. + -ramdisk_id ID of the ramdisk to use for the instances, + overriding the ramdisk specified in the image. + -block_devices Specify block devices to map onto the instances, + overriding the values specified in the image. + See below for the syntax of this argument. + -block_device_mapping Alias for -block_devices. + -monitoring Pass a true value to enable detailed monitoring. + -subnet_id ID of the subnet to launch the instance + into. Only applicable for VPC instances. + -termination_protection Pass true to lock the instance so that it + cannot be terminated using the API. Use + modify_instance() to unset this if youu wish to + terminate the instance later. + -disable_api_termination -- Same as above. + -shutdown_behavior Pass "stop" (the default) to stop the instance + and save its disk state when "shutdown" is called + from within the instance. Stopped instances can + be restarted later. Pass "terminate" to + instead terminate the instance and discard its + state completely. + -instance_initiated_shutdown_behavior -- Same as above. + -private_ip_address Assign the instance to a specific IP address + from a VPC subnet (VPC only). + -client_token Unique identifier that you can provide to ensure + idempotency of the request. You can use + $ec2->token() to generate a suitable identifier. + See http://docs.amazonwebservices.com/AWSEC2/ + latest/UserGuide/Run_Instance_Idempotency.html + +=item Instance types + +The following is the list of instance types currently allowed by +Amazon: + + m1.small c1.medium m2.xlarge cc1.4xlarge cg1.4xlarge t1.micro + m1.large c1.xlarge m2.2xlarge + m1.xlarge m2.4xlarge + +=item Block device syntax + +The syntax of -block_devices is identical to what is used by the +ec2-run-instances command-line tool. Borrowing from the manual page of +that tool: + +The format is '=', where 'block-device' can be one of the +following: + + - 'none': indicates that a block device that would be exposed at the + specified device should be suppressed. For example: '/dev/sdb=none' + + - 'ephemeral[0-3]': indicates that the Amazon EC2 ephemeral store + (instance local storage) should be exposed at the specified device. + For example: '/dev/sdc=ephemeral0'. + + - '[][:[:]]': indicates + that an Amazon EBS volume, created from the specified Amazon EBS + snapshot, should be exposed at the specified device. The following + combinations are supported: + + - '': the ID of an Amazon EBS snapshot, which must + be owned by or restorable by the caller. May be left out if a + is specified, creating an empty Amazon EBS volume of + the specified size. + + - '': the size (GiBs) of the Amazon EBS volume to be + created. If a snapshot was specified, this may not be smaller + than the size of the snapshot itself. + + - '': indicates whether the Amazon EBS + volume should be deleted on instance termination. If not + specified, this will default to 'true' and the volume will be + deleted. + + Examples: -block_devices => '/dev/sdb=snap-7eb96d16' + -block_devices => '/dev/sdc=snap-7eb96d16:80:false' + -block_devices => '/dev/sdd=:120' + +To provide multiple mappings, use an array reference. In this example, +we launch two 'm1.small' instance in which /dev/sdb is mapped to +ephemeral storage and /dev/sdc is mapped to a new 100 G EBS volume: + + @i=$ec2->run_instances(-image_id => 'ami-12345', + -min_count => 2, + -block_devices => ['/dev/sdb=ephemeral0', + '/dev/sdc=:100:true'] + ) + +=item Return value + +On success, this method returns a list of VM::EC2::Instance +objects. If called in a scalar context AND only one instance was +requested, it will return a single instance object (rather than +returning a list of size one which is then converted into numeric "1", +as would be the usual Perl behavior). + +Note that this behavior is different from the Amazon API, which +returns a ReservationSet. In this API, ask the instances for the +the reservation, owner, requester, and group information using +reservationId(), ownerId(), requesterId() and groups() methods. + +=item Tips + +1. If you have a VM::EC2::Image object returned from + Describe_images(), you may run it using run_instances(): + + my $image = $ec2->describe_images(-image_id => 'ami-12345'); + $image->run_instances( -min_count => 10, + -block_devices => ['/dev/sdb=ephemeral0', + '/dev/sdc=:100:true'] + ) + +2. It may take a short while for a newly-launched instance to be + returned by describe_instances(). You may need to sleep for 1-2 seconds + before current_status() returns the correct value. + +3. Each instance object has a current_status() method which will + return the current run state of the instance. You may poll this + method to wait until the instance is running: + + my $instance = $ec2->run_instances(...); + sleep 1; + while ($instance->current_status ne 'running') { + sleep 5; + } + +4. The utility method wait_for_instances() will wait until all + passed instances are in the 'running' or other terminal state. + + my @instances = $ec2->run_instances(...); + $ec2->wait_for_instances(@instances); + +=back + +=cut + +sub run_instances { + my $self = shift; + my %args = @_; + $args{-image_id} or croak "run_instances(): -image_id argument missing"; + $args{-min_count} ||= 1; + $args{-max_count} ||= $args{-min_count}; + $args{-availability_zone} ||= $args{-zone}; + $args{-availability_zone} ||= $args{-placement_zone}; + + my @p = map {$self->single_parm($_,\%args) } + qw(ImageId MinCount MaxCount KeyName KernelId RamdiskId PrivateIPAddress + InstanceInitiatedShutdownBehavior ClientToken SubnetId InstanceType); + push @p,map {$self->list_parm($_,\%args)} qw(SecurityGroup SecurityGroupId); + push @p,('UserData' =>encode_base64($args{-user_data})) if $args{-user_data}; + push @p,('Placement.AvailabilityZone'=>$args{-availability_zone}) if $args{-availability_zone}; + push @p,('Placement.GroupName'=>$args{-placement_group}) if $args{-placement_group}; + push @p,('Placement.Tenancy'=>$args{-tenancy}) if $args{-placement_tenancy}; + push @p,('Monitoring.Enabled' =>'true') if $args{-monitoring}; + push @p,('DisableApiTermination'=>'true') if $args{-termination_protection}; + push @p,('InstanceInitiatedShutdownBehavior'=>$args{-shutdown_behavior}) if $args{-shutdown_behavior}; + push @p,$self->block_device_parm($args{-block_devices}||$args{-block_device_mapping}); + return $self->call('RunInstances',@p); +} + +=head2 @s = $ec2->start_instances(-instance_id=>\@instance_ids) +=head2 @s = $ec2->start_instances(@instance_ids) + +Start the instances named by @instance_ids and return one or more +VM::EC2::Instance::State::Change objects. + +To wait for the all the instance ids to reach their final state +("running" unless an error occurs), call wait_for_instances(). + +Example: + + # find all stopped instances + @instances = $ec2->describe_instances(-filter=>{'instance-state-name'=>'stopped'}); + + # start them + $ec2->start_instances(@instances) + + # pause till they are running (or crashed) + $ec2->wait_for_instances(@instances) + +You can also start an instance by calling the object's start() method: + + $instances[0]->start('wait'); # start instance and wait for it to + # be running + +The objects returned by calling start_instances() indicate the current +and previous states of the instance. The previous state is typically +"stopped" and the current state is usually "pending." This information +is only current to the time that the start_instances() method was called. +To get the current run state of the instance, call its status() +method: + + die "ouch!" unless $instances[0]->current_status eq 'running'; + +=cut + +sub start_instances { + my $self = shift; + my @instance_ids = $self->instance_parm(@_) + or croak "usage: start_instances(\@instance_ids)"; + my $c = 1; + my @params = map {'InstanceId.'.$c++,$_} @instance_ids; + return $self->call('StartInstances',@params) or return; +} + +=head2 @s = $ec2->stop_instances(-instance_id=>\@instance_ids,-force=>1) + +=head2 @s = $ec2->stop_instances(@instance_ids) + +Stop the instances named by @instance_ids and return one or more +VM::EC2::Instance::State::Change objects. In the named parameter +version of this method, you may optionally provide a -force argument, +which if true, forces the instance to halt without giving it a chance +to run its shutdown procedure (the equivalent of pulling a physical +machine's plug). + +To wait for instances to reach their final state, call +wait_for_instances(). + +Example: + + # find all running instances + @instances = $ec2->describe_instances(-filter=>{'instance-state-name'=>'running'}); + + # stop them immediately and wait for confirmation + $ec2->stop_instances(-instance_id=>\@instances,-force=>1); + $ec2->wait_for_instances(@instances); + +You can also stop an instance by calling the object's start() method: + + $instances[0]->stop('wait'); # stop first instance and wait for it to + # stop completely + +=cut + +sub stop_instances { + my $self = shift; + my (@instance_ids,$force); + + if ($_[0] =~ /^-/) { + my %argv = @_; + @instance_ids = ref $argv{-instance_id} ? + @{$argv{-instance_id}} : $argv{-instance_id}; + $force = $argv{-force}; + } else { + @instance_ids = @_; + } + @instance_ids or croak "usage: stop_instances(\@instance_ids)"; + + my $c = 1; + my @params = map {'InstanceId.'.$c++,$_} @instance_ids; + push @params,Force=>1 if $force; + return $self->call('StopInstances',@params) or return; +} + +=head2 @s = $ec2->terminate_instances(-instance_id=>\@instance_ids) + +=head2 @s = $ec2->terminate_instances(@instance_ids) + +Terminate the instances named by @instance_ids and return one or more +VM::EC2::Instance::State::Change objects. This method will fail +for any instances whose termination protection field is set. + +To wait for the all the instances to reach their final state, call +wait_for_instances(). + +Example: + + # find all instances tagged as "Version 0.5" + @instances = $ec2->describe_instances({'tag:Version'=>'0.5'}); + + # terminate them + $ec2->terminate_instances(@instances); + +You can also terminate an instance by calling its terminate() method: + + $instances[0]->terminate; + +=cut + +sub terminate_instances { + my $self = shift; + my @instance_ids = $self->instance_parm(@_) + or croak "usage: start_instances(\@instance_ids)"; + my $c = 1; + my @params = map {'InstanceId.'.$c++,$_} @instance_ids; + return $self->call('TerminateInstances',@params) or return; +} + +=head2 @s = $ec2->reboot_instances(-instance_id=>\@instance_ids) + +=head2 @s = $ec2->reboot_instances(@instance_ids) + +Reboot the instances named by @instance_ids and return one or more +VM::EC2::Instance::State::Change objects. + +To wait for the all the instances to reach their final state, call +wait_for_instances(). + +You can also reboot an instance by calling its terminate() method: + + $instances[0]->reboot; + +=cut + +sub reboot_instances { + my $self = shift; + my @instance_ids = $self->instance_parm(@_) + or croak "Usage: reboot_instances(\@instance_ids)"; + my $c = 1; + my @params = map {'InstanceId.'.$c++,$_} @instance_ids; + return $self->call('RebootInstances',@params) or return; +} + +=head2 $t = $ec2->token + +Return a client token for use with start_instances(). + +=cut + +sub token { + my $self = shift; + my $seed = $self->{idempotent_seed}; + $self->{idempotent_seed} = sha1_hex($seed); + $seed =~ s/(.{6})/$1-/g; + return $seed; +} + +=head2 $ec2->wait_for_instances(@instances) + +Wait for all members of the provided list of instances to reach some +terminal state ("running", "stopped" or "terminated"), and then return +a hash reference that maps each instance ID to its final state. + +Typical usage: + + my @instances = $image->run_instances(-key_name =>'My_key', + -security_group=>'default', + -min_count =>2, + -instance_type => 't1.micro') + or die $ec2->error_str; + my $status = $ec2->wait_for_instances(@instances); + my @failed = grep {$status->{$_} ne 'running'} @instances; + print "The following failed: @failed\n"; + +If no terminal state is reached within a set timeout, then this method +returns undef and sets $ec2->error_str() to a suitable message. The +timeout, which defaults to 10 minutes (600 seconds), can be get or set +with $ec2->wait_for_timeout(). + +=cut + +sub wait_for_instances { + my $self = shift; + $self->wait_for_terminal_state(\@_, + ['running','stopped','terminated'], + $self->wait_for_timeout); +} + +=head2 $ec2->wait_for_snapshots(@snapshots) + +Wait for all members of the provided list of snapshots to reach some +terminal state ("completed", "error"), and then return a hash +reference that maps each snapshot ID to its final state. + +This method may potentially wait forever. It has no set timeout. Wrap +it in an eval{} and set alarm() if you wish to timeout. + +=cut + +sub wait_for_snapshots { + my $self = shift; + $self->wait_for_terminal_state(\@_, + ['completed','error'], + 0); # no timeout on snapshots -- they may take days +} + +=head2 $ec2->wait_for_volumes(@volumes) + +Wait for all members of the provided list of volumes to reach some +terminal state ("available", "in-use", "deleted" or "error"), and then +return a hash reference that maps each volume ID to its final state. + +If no terminal state is reached within a set timeout, then this method +returns undef and sets $ec2->error_str() to a suitable message. The +timeout, which defaults to 10 minutes (600 seconds), can be get or set +with $ec2->wait_for_timeout(). + +=cut + +sub wait_for_volumes { + my $self = shift; + $self->wait_for_terminal_state(\@_, + ['available','in-use','deleted','error'], + $self->wait_for_timeout); +} + +=head2 $ec2->wait_for_attachments(@attachment) + +Wait for all members of the provided list of +VM::EC2::BlockDevice::Attachment objects to reach some terminal state +("attached" or "detached"), and then return a hash reference that maps +each attachment to its final state. + +Typical usage: + + my $i = 0; + my $instance = 'i-12345'; + my @attach; + foreach (@volume) { + push @attach,$_->attach($instance,'/dev/sdf'.$i++; + } + my $s = $ec2->wait_for_attachments(@attach); + my @failed = grep($s->{$_} ne 'attached'} @attach; + warn "did not attach: ",join ', ',@failed; + +If no terminal state is reached within a set timeout, then this method +returns undef and sets $ec2->error_str() to a suitable message. The +timeout, which defaults to 10 minutes (600 seconds), can be get or set +with $ec2->wait_for_timeout(). + +=cut + +sub wait_for_attachments { + my $self = shift; + $self->wait_for_terminal_state(\@_, + ['attached','detached'], + $self->wait_for_timeout); +} + +=head2 $ec2->wait_for_terminal_state(\@objects,['list','of','states'] [,$timeout]) + +Generic version of the last four methods. Wait for all members of the provided list of Amazon objects +instances to reach some terminal state listed in the second argument, and then return +a hash reference that maps each object ID to its final state. + +If a timeout is provided, in seconds, then the method will abort after +waiting the indicated time and return undef. + +=cut + +sub wait_for_terminal_state { + my $self = shift; + my ($objects,$terminal_states,$timeout) = @_; + my %terminal_state = map {$_=>1} @$terminal_states; + my %status = (); + my @pending = grep {defined $_} @$objects; # in case we're passed an undef + my $status = eval { + local $SIG{ALRM}; + if ($timeout && $timeout > 0) { + $SIG{ALRM} = sub {die "timeout"}; + alarm($timeout); + } + while (@pending) { + sleep 3; + $status{$_} = $_->current_status foreach @pending; + @pending = grep { !$terminal_state{$status{$_}} } @pending; + } + alarm(0); + \%status; + }; + if ($@ =~ /timeout/) { + $self->error('timeout waiting for terminal state'); + return; + } + return $status; +} + +=head1 $timeout = $ec2->wait_for_timeout([$new_timeout]); + +Get or change the timeout for wait_for_instances(), wait_for_attachments(), +and wait_for_volumes(). The timeout is given in seconds, and defaults to +600 (10 minutes). You can set this to 0 to wait forever. + +=cut + +sub wait_for_timeout { + my $self = shift; + $self->{wait_for_timeout} = WAIT_FOR_TIMEOUT + unless defined $self->{wait_for_timeout}; + my $d = $self->{wait_for_timeout}; + $self->{wait_for_timeout} = shift if @_; + return $d; +} + +=head2 $password_data = $ec2->get_password_data(-instance_id=>'i-12345'); + +=head2 $password_data = $ec2->get_password_data('i-12345'); + +For Windows instances, get the administrator's password as a +L object. + +=cut + +sub get_password_data { + my $self = shift; + my %args = $self->args(-instance_id=>@_); + $args{-instance_id} or croak "Usage: get_password_data(-instance_id=>\$id)"; + my @params = $self->single_parm('InstanceId',\%args); + return $self->call('GetPasswordData',@params); +} + +=head2 $output = $ec2->get_console_output(-instance_id=>'i-12345') + +=head2 $output = $ec2->get_console_output('i-12345'); + +Return the console output of the indicated instance. The output is +actually a VM::EC2::ConsoleOutput object, but it is +overloaded so that when treated as a string it will appear as a +large text string containing the console output. When treated like an +object it provides instanceId() and timestamp() methods. + +=cut + +sub get_console_output { + my $self = shift; + my %args = $self->args(-instance_id=>@_); + $args{-instance_id} or croak "Usage: get_console_output(-instance_id=>\$id)"; + my @params = $self->single_parm('InstanceId',\%args); + return $self->call('GetConsoleOutput',@params); +} + +=head2 @monitoring_state = $ec2->monitor_instances(@list_of_instanceIds) + +=head2 @monitoring_state = $ec2->monitor_instances(-instance_id=>\@instanceIds) + +This method enables monitoring for the listed instances and returns a +list of VM::EC2::Instance::MonitoringState objects. You can +later use these objects to activate and inactivate monitoring. + +=cut + +sub monitor_instances { + my $self = shift; + my %args = $self->args('-instance_id',@_); + my @params = $self->list_parm('InstanceId',\%args); + return $self->call('MonitorInstances',@params); +} + +=head2 @monitoring_state = $ec2->unmonitor_instances(@list_of_instanceIds) + +=head2 @monitoring_state = $ec2->unmonitor_instances(-instance_id=>\@instanceIds) + +This method disables monitoring for the listed instances and returns a +list of VM::EC2::Instance::MonitoringState objects. You can +later use these objects to activate and inactivate monitoring. + +=cut + +sub unmonitor_instances { + my $self = shift; + my %args = $self->args('-instance_id',@_); + my @params = $self->list_parm('InstanceId',\%args); + return $self->call('UnmonitorInstances',@params); +} + +=head2 $meta = $ec2->instance_metadata + +B This method returns a +VM::EC2::Instance::Metadata object that will return information about +the currently running instance using the HTTP:// metadata fields +described at +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?instancedata-data-categories.html. This +is usually fastest way to get runtime information on the current +instance. + +=cut + +sub instance_metadata { + VM::EC2::Dispatch::load_module('VM::EC2::Instance::Metadata'); + return VM::EC2::Instance::Metadata->new(); +} + +=head2 @data = $ec2->describe_instance_attribute($instance_id,$attribute) + +This method returns instance attributes. Only one attribute can be +retrieved at a time. The following is the list of attributes that can be +retrieved: + + instanceType -- scalar + kernel -- scalar + ramdisk -- scalar + userData -- scalar + disableApiTermination -- scalar + instanceInitiatedShutdownBehavior -- scalar + rootDeviceName -- scalar + blockDeviceMapping -- list of hashref + sourceDestCheck -- scalar + groupSet -- list of scalar + +All of these values can be retrieved more conveniently from the +L object returned from describe_instances(), so +there is no attempt to parse the results of this call into Perl +objects. Therefore, some of the attributes, in particular +'blockDeviceMapping' will be returned as raw hashrefs. + +=cut + +sub describe_instance_attribute { + my $self = shift; + @_ == 2 or croak "Usage: describe_instance_attribute(\$instance_id,\$attribute_name)"; + my ($instance_id,$attribute) = @_; + my @param = (InstanceId=>$instance_id,Attribute=>$attribute); + my $result = $self->call('DescribeInstanceAttribute',@param); + return $result && $result->attribute($attribute); +} + +=head2 $boolean = $ec2->modify_instance_attribute($instance_id,-$attribute_name=>$value) + +This method changes instance attributes. It can only be applied to stopped instances. +The following is the list of attributes that can be set: + + -instance_type -- type of instance, e.g. "m1.small" + -kernel -- kernel id + -ramdisk -- ramdisk id + -user_data -- user data + -termination_protection -- true to prevent termination from the console + -disable_api_termination -- same as the above + -shutdown_behavior -- "stop" or "terminate" + -instance_initiated_shutdown_behavior -- same as above + -root_device_name -- root device name + -source_dest_check -- enable NAT (VPC only) + -group_id -- VPC security group + -block_devices -- Specify block devices to change + deleteOnTermination flag + -block_device_mapping -- Alias for -block_devices + +Only one attribute can be changed in a single request. For example: + + $ec2->modify_instance_attribute('i-12345',-kernel=>'aki-f70657b2'); + +The result code is true if the attribute was successfully modified, +false otherwise. In the latter case, $ec2->error() will provide the +error message. + +The ability to change the deleteOnTermination flag for attached block devices +is not documented in the official Amazon API documentation, but appears to work. +The syntax is: + +# turn on deleteOnTermination + $ec2->modify_instance_attribute(-block_devices=>'/dev/sdf=v-12345') +# turn off deleteOnTermination + $ec2->modify_instance_attribute(-block_devices=>'/dev/sdf=v-12345') + +The syntax is slightly different from what is used by -block_devices +in run_instances(), and is "device=volumeId:boolean". Multiple block +devices can be specified using an arrayref. + +=cut + +sub modify_instance_attribute { + my $self = shift; + my $instance_id = shift or croak "Usage: modify_instance_attribute(\$instanceId,%param)"; + my %args = @_; + + my @param = (InstanceId=>$instance_id); + push @param,$self->value_parm($_,\%args) foreach + qw(InstanceType Kernel Ramdisk UserData DisableApiTermination + InstanceInitiatedShutdownBehavior SourceDestCheck); + push @param,$self->list_parm('GroupId',\%args); + push @param,('DisableApiTermination.Value'=>'true') if $args{-termination_protection}; + push @param,('InstanceInitiatedShutdownBehavior.Value'=>$args{-shutdown_behavior}) if $args{-shutdown_behavior}; + my $block_devices = $args{-block_devices} || $args{-block_device_mapping}; + push @param,$self->block_device_parm($block_devices); + + return $self->call('ModifyInstanceAttribute',@param); +} + +=head2 $boolean = $ec2->reset_instance_attribute($instance_id,$attribute) + +This method resets an attribute of the given instance to its default +value. Valid attributes are "kernel", "ramdisk" and +"sourceDestCheck". The result code is true if the reset was +successful. + +=cut + +sub reset_instance_attribute { + my $self = shift; + @_ == 2 or croak "Usage: reset_instance_attribute(\$instanceId,\$attribute_name)"; + my ($instance_id,$attribute) = @_; + my %valid = map {$_=>1} qw(kernel ramdisk sourceDestCheck); + $valid{$attribute} or croak "attribute to reset must be one of 'kernel', 'ramdisk', or 'sourceDestCheck'"; + return $self->call('ResetInstanceAttribute',InstanceId=>$instance_id,Attribute=>$attribute); +} + +=head1 EC2 AMAZON MACHINE IMAGES + +The methods in this section allow you to query and manipulate Amazon +machine images (AMIs). See L. + +=head2 @i = $ec2->describe_images(-image_id=>\@id,-executable_by=>$id, + -owner=>$id, -filter=>\%filters) + +=head2 @i = $ec2->describe_images(@image_ids) + +Return a series of VM::EC2::Image objects, each describing an +AMI. Optional parameters: + + -image_id The id of the image, either a string scalar or an + arrayref. + + -executable_by Filter by images executable by the indicated user account + + -owner Filter by owner account + + -filter Tags and other filters to apply + +If there are no other arguments, you may omit the -filter argument +name and call describe_images() with a single hashref consisting of +the search filters you wish to apply. + +The full list of image filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeImages.html + +=cut + +sub describe_images { + my $self = shift; + my %args = $self->args(-image_id=>@_); + my @params; + push @params,$self->list_parm($_,\%args) foreach qw(ExecutableBy ImageId Owner); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeImages',@params) or return; +} + +=head2 $image = $ec2->create_image(%args) + +Create an image from an EBS-backed instance and return a +VM::EC2::Image object. The instance must be in the "stopped" or +"running" state. In the latter case, Amazon will stop the instance, +create the image, and then restart it unless the -no_reboot argument +is provided. + +Arguments: + + -instance_id ID of the instance to create an image from. (required) + -name Name for the image that will be created. (required) + -description Description of the new image. + -no_reboot If true, don't reboot the instance. + +=cut + +sub create_image { + my $self = shift; + my %args = @_; + $args{-instance_id} && $args{-name} + or croak "Usage: create_image(-instance_id=>\$id,-name=>\$name)"; + my @param = $self->single_parm('InstanceId',\%args); + push @param,$self->single_parm('Name',\%args); + push @param,$self->single_parm('Description',\%args); + push @param,$self->boolean_parm('NoReboot',\%args); + return $self->call('CreateImage',@param); +} + +=head2 $image = $ec2->register_image(%args) + +Register an image, creating an AMI. This can be used to create an AMI +from a S3-backed instance-store bundle, or to create an AMI from a +snapshot of an EBS-backed root volume. + +Required arguments: + + -name Name for the image that will be created. + +Arguments required for an EBS-backed image: + + -root_device_name The root device name, e.g. /dev/sda1 + -block_device_mapping The block device mapping strings, including the + snapshot ID for the root volume. This can + be either a scalar string or an arrayref. + See run_instances() for a description of the + syntax. + -block_devices Alias of the above. + +Arguments required for an instance-store image: + + -image_location Full path to the AMI manifest in Amazon S3 storage. + +Common optional arguments: + + -description Description of the AMI + -architecture Architecture of the image ("i386" or "x86_64") + -kernel_id ID fo the kernel to use + -ramdisk_id ID of the RAM disk to use + +While you do not have to specify the kernel ID, it is strongly +recommended that you do so. Otherwise the kernel will have to be +specified for run_instances(). + +Note: Immediately after registering the image you can add tags to it +and use modify_image_attribute to change launch permissions, etc. + +=cut + +sub register_image { + my $self = shift; + my %args = @_; + + $args{-name} or croak "register_image(): -name argument required"; + $args{-block_device_mapping} ||= $args{-block_devices}; + if (!$args{-image_location}) { + $args{-root_device_name} && $args{-block_device_mapping} + or croak "register_image(): either provide -image_location to create an instance-store AMI\nor both the -root_device_name && -block_device_mapping arguments to create an EBS-backed AMI."; + } + + my @param; + for my $a (qw(Name RootDeviceName ImageLocation Description + Architecture KernelId RamdiskId)) { + push @param,$self->single_parm($a,\%args); + } + push @param,$self->block_device_parm($args{-block_devices} || $args{-block_device_mapping}); + + return $self->call('RegisterImage',@param); +} + +=head2 $result = $ec2->deregister_image($image_id) + +Deletes the registered image and returns true if successful. + +=cut + +sub deregister_image { + my $self = shift; + my %args = $self->args(-image_id => @_); + my @param = $self->single_parm(ImageId=>\%args); + return $self->call('DeregisterImage',@param) or return; +} + +=head2 @data = $ec2->describe_image_attribute($image_id,$attribute) + +This method returns image attributes. Only one attribute can be +retrieved at a time. The following is the list of attributes that can be +retrieved: + + description -- scalar + kernel -- scalar + ramdisk -- scalar + launchPermission -- list of scalar + productCodes -- array + blockDeviceMapping -- list of hashref + +All of these values can be retrieved more conveniently from the +L object returned from describe_images(), so there is +no attempt to parse the results of this call into Perl objects. In +particular, 'blockDeviceMapping' is returned as a raw hashrefs (there +also seems to be an AWS bug that causes fetching this attribute to return an +AuthFailure error). + +Please see the VM::EC2::Image launchPermissions() and +blockDeviceMapping() methods for more convenient ways to get this +data. + +=cut + +sub describe_image_attribute { + my $self = shift; + @_ == 2 or croak "Usage: describe_image_attribute(\$instance_id,\$attribute_name)"; + my ($instance_id,$attribute) = @_; + my @param = (ImageId=>$instance_id,Attribute=>$attribute); + my $result = $self->call('DescribeImageAttribute',@param); + return $result && $result->attribute($attribute); +} + +=head2 $boolean = $ec2->modify_image_attribute($image_id,-$attribute_name=>$value) + +This method changes image attributes. The first argument is the image +ID, and this is followed by the attribute name and the value to change +it to. + +The following is the list of attributes that can be set: + + -launch_add_user -- scalar or arrayref of UserIds to grant launch permissions to + -launch_add_group -- scalar or arrayref of Groups to remove launch permissions from + (only currently valid value is "all") + -launch_remove_user -- scalar or arrayref of UserIds to remove from launch permissions + -launch_remove_group -- scalar or arrayref of Groups to remove from launch permissions + -product_code -- scalar or array of product codes to add + -description -- scalar new description + +You can abbreviate the launch permission arguments to -add_user, +-add_group, -remove_user, -remove_group, etc. + +Only one attribute can be changed in a single request. + +For example: + + $ec2->modify_image_attribute('i-12345',-product_code=>['abcde','ghijk']); + +The result code is true if the attribute was successfully modified, +false otherwise. In the latter case, $ec2->error() will provide the +error message. + +To make an image public, specify -launch_add_group=>'all': + + $ec2->modify_image_attribute('i-12345',-launch_add_group=>'all'); + +Also see L for shortcut methods. For example: + + $image->add_authorized_users(1234567,999991); + +=cut + +sub modify_image_attribute { + my $self = shift; + my $image_id = shift or croak "Usage: modify_image_attribute(\$imageId,%param)"; + my %args = @_; + + # shortcuts + foreach (qw(add_user remove_user add_group remove_group)) { + $args{"-launch_$_"} ||= $args{"-$_"}; + } + + my @param = (ImageId=>$image_id); + push @param,$self->value_parm('Description',\%args); + push @param,$self->list_parm('ProductCode',\%args); + push @param,$self->launch_perm_parm('Add','UserId', $args{-launch_add_user}); + push @param,$self->launch_perm_parm('Remove','UserId',$args{-launch_remove_user}); + push @param,$self->launch_perm_parm('Add','Group', $args{-launch_add_group}); + push @param,$self->launch_perm_parm('Remove','Group', $args{-launch_remove_group}); + return $self->call('ModifyImageAttribute',@param); +} + +=head2 $boolean = $ec2->reset_image_attribute($image_id,$attribute_name) + +This method resets an attribute of the given snapshot to its default +value. The valid attributes are: + + launchPermission + + +=cut + +sub reset_image_attribute { + my $self = shift; + @_ == 2 or + croak "Usage: reset_image_attribute(\$imageId,\$attribute_name)"; + my ($image_id,$attribute) = @_; + my %valid = map {$_=>1} qw(launchPermission); + $valid{$attribute} or croak "attribute to reset must be one of ",join(' ',map{"'$_'"} keys %valid); + return $self->call('ResetImageAttribute', + ImageId => $image_id, + Attribute => $attribute); +} + +=head1 EC2 VOLUMES AND SNAPSHOTS + +The methods in this section allow you to query and manipulate EC2 EBS +volumes and snapshots. See L and L +for additional functionality provided through the object interface. + +=head2 @v = $ec2->describe_volumes(-volume_id=>\@ids,-filter=>\%filters) + +=head2 @v = $ec2->describe_volumes(@volume_ids) + +Return a series of VM::EC2::Volume objects. Optional parameters: + + -volume_id The id of the volume to fetch, either a string + scalar or an arrayref. + + -filter One or more filters to apply to the search + +The -filter argument name can be omitted if there are no other +arguments you wish to pass. + +The full list of volume filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeVolumes.html + +=cut + +sub describe_volumes { + my $self = shift; + my %args = $self->args(-volume_id=>@_); + my @params; + push @params,$self->list_parm('VolumeId',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeVolumes',@params) or return; +} + +=head2 $v = $ec2->create_volume(-availability_zone=>$zone,-snapshot_id=>$snapshotId,-size=>$size) + +Create a volume in the specified availability zone and return +information about it. + +Arguments: + + -availability_zone -- An availability zone from + describe_availability_zones (required) + + -snapshot_id -- ID of a snapshot to use to build volume from. + + -size -- Size of the volume, in GB (between 1 and 1024). + +One or both of -snapshot_id or -size are required. For convenience, +you may abbreviate -availability_zone as -zone, and -snapshot_id as +-snapshot. + +The returned object is a VM::EC2::Volume object. + +=cut + +sub create_volume { + my $self = shift; + my %args = @_; + my $zone = $args{-availability_zone} || $args{-zone} or croak "-availability_zone argument is required"; + my $snap = $args{-snapshot_id} || $args{-snapshot}; + my $size = $args{-size}; + $snap || $size or croak "One or both of -snapshot_id or -size are required"; + my @params = (AvailabilityZone => $zone); + push @params,(SnapshotId => $snap) if $snap; + push @params,(Size => $size) if $size; + return $self->call('CreateVolume',@params) or return; +} + +=head2 $result = $ec2->delete_volume($volume_id); + +Deletes the specified volume. Returns a boolean indicating success of +the delete operation. Note that a volume will remain in the "deleting" +state for some time after this call completes. + +=cut + +sub delete_volume { + my $self = shift; + my %args = $self->args(-volume_id => @_); + my @param = $self->single_parm(VolumeId=>\%args); + return $self->call('DeleteVolume',@param) or return; +} + +=head2 $attachment = $ec2->attach_volume($volume_id,$instance_id,$device); + +=head2 $attachment = $ec2->attach_volume(-volume_id=>$volume_id,-instance_id=>$instance_id,-device=>$device); + +Attaches the specified volume to the instance using the indicated +device. All arguments are required: + + -volume_id -- ID of the volume to attach. The volume must be in + "available" state. + -instance_id -- ID of the instance to attach to. Both instance and + attachment must be in the same availability zone. + -device -- How the device is exposed to the instance, e.g. + '/dev/sdg'. + +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling current_status(): + + my $a = $ec2->attach_volume('vol-12345','i-12345','/dev/sdg'); + while ($a->current_status ne 'attached') { + sleep 2; + } + print "volume is ready to go\n"; + +or more simply + + my $a = $ec2->attach_volume('vol-12345','i-12345','/dev/sdg'); + $ec2->wait_for_attachments($a); + +=cut + +sub attach_volume { + my $self = shift; + my %args; + if ($_[0] !~ /^-/ && @_ == 3) { + @args{qw(-volume_id -instance_id -device)} = @_; + } else { + %args = @_; + } + $args{-volume_id} && $args{-instance_id} && $args{-device} + or croak "-volume_id, -instance_id and -device arguments must all be specified"; + my @param = $self->single_parm(VolumeId=>\%args); + push @param,$self->single_parm(InstanceId=>\%args); + push @param,$self->single_parm(Device=>\%args); + return $self->call('AttachVolume',@param) or return; +} + +=head2 $attachment = $ec2->detach_volume($volume_id) + +=head2 $attachment = $ec2->detach_volume(-volume_id=>$volume_id,-instance_id=>$instance_id, + -device=>$device, -force=>$force); + +Detaches the specified volume from an instance. + + -volume_id -- ID of the volume to detach. (required) + -instance_id -- ID of the instance to detach from. (optional) + -device -- How the device is exposed to the instance. (optional) + -force -- Force detachment, even if previous attempts were + unsuccessful. (optional) + + +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling current_status(): + + my $a = $ec2->detach_volume('vol-12345'); + while ($a->current_status ne 'detached') { + sleep 2; + } + print "volume is ready to go\n"; + +Or more simply: + + my $a = $ec2->detach_volume('vol-12345'); + $ec2->wait_for_attachments($a); + print "volume is ready to go\n" if $a->current_status eq 'detached'; + + +=cut + +sub detach_volume { + my $self = shift; + my %args = $self->args(-volume_id => @_); + my @param = $self->single_parm(VolumeId=>\%args); + push @param,$self->single_parm(InstanceId=>\%args); + push @param,$self->single_parm(Device=>\%args); + push @param,$self->single_parm(Force=>\%args); + return $self->call('DetachVolume',@param) or return; +} + +=head2 @snaps = $ec2->describe_snapshots(-snapshot_id=>\@ids,%other_param) + +=head2 @snaps = $ec2->describe_snapshots(@snapshot_ids) + +Returns a series of VM::EC2::Snapshot objects. All parameters +are optional: + + -snapshot_id ID of the snapshot + + -owner Filter by owner ID + + -restorable_by Filter by IDs of a user who is allowed to restore + the snapshot + + -filter Tags and other filters + +The -filter argument name can be omitted if there are no other +arguments you wish to pass. + +The full list of applicable filters can be found at +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeSnapshots.html + +=cut + +sub describe_snapshots { + my $self = shift; + my %args = $self->args('-snapshot_id',@_); + + my @params; + push @params,$self->list_parm('SnapshotId',\%args); + push @params,$self->list_parm('Owner',\%args); + push @params,$self->list_parm('RestorableBy',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeSnapshots',@params); +} + +=head2 @data = $ec2->describe_snapshot_attribute($snapshot_id,$attribute) + +This method returns snapshot attributes. The first argument is the +snapshot ID, and the second is the name of the attribute to +fetch. Currently Amazon defines only one attribute, +"createVolumePermission", which will return a list of user Ids who are +allowed to create volumes from this snapshot. + +The result is a raw hash of attribute values. Please see +L for a more convenient way of accessing and +modifying snapshot attributes. + +=cut + +sub describe_snapshot_attribute { + my $self = shift; + @_ == 2 or croak "Usage: describe_snapshot_attribute(\$instance_id,\$attribute_name)"; + my ($snapshot_id,$attribute) = @_; + my @param = (SnapshotId=>$snapshot_id,Attribute=>$attribute); + my $result = $self->call('DescribeSnapshotAttribute',@param); + return $result && $result->attribute($attribute); +} + +=head2 $boolean = $ec2->modify_snapshot_attribute($snapshot_id,-$argument=>$value) + +This method changes snapshot attributes. The first argument is the +snapshot ID, and this is followed by an attribute modification command +and the value to change it to. + +Currently the only attribute that can be changed is the +createVolumeAttribute. This is done through the following arguments + + -createvol_add_user -- scalar or arrayref of UserIds to grant create volume permissions to + -createvol_add_group -- scalar or arrayref of Groups to remove create volume permissions from + (only currently valid value is "all") + -createvol_remove_user -- scalar or arrayref of UserIds to remove from create volume permissions + -createvol_remove_group -- scalar or arrayref of Groups to remove from create volume permissions + +You can abbreviate these to -add_user, -add_group, -remove_user, -remove_group, etc. + +See L for more convenient methods for interrogating +and modifying the create volume permissions. + +=cut + +sub modify_snapshot_attribute { + my $self = shift; + my $snapshot_id = shift or croak "Usage: modify_snapshot_attribute(\$snapshotId,%param)"; + my %args = @_; + + # shortcuts + foreach (qw(add_user remove_user add_group remove_group)) { + $args{"-createvol_$_"} ||= $args{"-$_"}; + } + + my @param = (SnapshotId=>$snapshot_id); + push @param,$self->create_volume_perm_parm('Add','UserId', $args{-createvol_add_user}); + push @param,$self->create_volume_perm_parm('Remove','UserId',$args{-createvol_remove_user}); + push @param,$self->create_volume_perm_parm('Add','Group', $args{-createvol_add_group}); + push @param,$self->create_volume_perm_parm('Remove','Group', $args{-createvol_remove_group}); + return $self->call('ModifySnapshotAttribute',@param); +} + +=head2 $boolean = $ec2->reset_snapshot_attribute($snapshot_id,$attribute) + +This method resets an attribute of the given snapshot to its default +value. The only valid attribute at this time is +"createVolumePermission." + +=cut + +sub reset_snapshot_attribute { + my $self = shift; + @_ == 2 or + croak "Usage: reset_snapshot_attribute(\$snapshotId,\$attribute_name)"; + my ($snapshot_id,$attribute) = @_; + my %valid = map {$_=>1} qw(createVolumePermission); + $valid{$attribute} or croak "attribute to reset must be 'createVolumePermission'"; + return $self->call('ResetSnapshotAttribute', + SnapshotId => $snapshot_id, + Attribute => $attribute); +} + + +=head2 $snapshot = $ec2->create_snapshot($volume_id) + +=head2 $snapshot = $ec2->create_snapshot(-volume_id=>$vol,-description=>$desc) + +Snapshot the EBS volume and store it to S3 storage. To ensure a +consistent snapshot, the volume should be unmounted prior to +initiating this operation. + +Arguments: + + -volume_id -- ID of the volume to snapshot (required) + -description -- A description to add to the snapshot (optional) + +The return value is a VM::EC2::Snapshot object that can be queried +through its current_status() interface to follow the progress of the +snapshot operation. + +Another way to accomplish the same thing is through the +VM::EC2::Volume interface: + + my $volume = $ec2->describe_volumes(-filter=>{'tag:Name'=>'AccountingData'}); + $s = $volume->create_snapshot("Backed up at ".localtime); + while ($s->current_status eq 'pending') { + print "Progress: ",$s->progress,"% done\n"; + } + print "Snapshot status: ",$s->current_status,"\n"; + +=cut + +sub create_snapshot { + my $self = shift; + my %args = $self->args('-volume_id',@_); + my @params = $self->single_parm('VolumeId',\%args); + push @params,$self->single_parm('Description',\%args); + return $self->call('CreateSnapshot',@params); +} + +=head2 $boolean = $ec2->delete_snapshot($snapshot_id) + +Delete the indicated snapshot and return true if the request was +successful. + +=cut + +sub delete_snapshot { + my $self = shift; + my %args = $self->args('-snapshot_id',@_); + my @params = $self->single_parm('SnapshotId',\%args); + return $self->call('DeleteSnapshot',@params); +} + +=head1 SECURITY GROUPS AND KEY PAIRS + +The methods in this section allow you to query and manipulate security +groups (firewall rules) and SSH key pairs. See +L and L for functionality +that is available through these objects. + +=head2 @sg = $ec2->describe_security_groups(-group_id => \@ids, + -group_name=> \@names, + -filter => \%filters); + +=head2 @sg = $ec2->describe_security_groups(@group_ids) + +Searches for security groups (firewall rules) matching the provided +filters and return a series of VM::EC2::SecurityGroup objects. + +Optional parameters: + + -group_name A single group name or an arrayref containing a list + of names + + -name Shorter version of -group_name + + -group_id A single group id (i.e. 'sg-12345') or an arrayref + containing a list of ids + + -filter Filter on tags and other attributes. + +The -filter argument name can be omitted if there are no other +arguments you wish to pass. + +The full list of security group filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeSecurityGroups.html + +=cut + +sub describe_security_groups { + my $self = shift; + my %args = $self->args(-group_id=>@_); + $args{-group_name} ||= $args{-name}; + my @params = map { $self->list_parm($_,\%args) } qw(GroupName GroupId); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeSecurityGroups',@params); +} + +=head2 $group = $ec2->create_security_group(-group_name=>$name, + -group_description=>$description, + -vpc_id => $vpc_id + ) + +Create a security group. Arguments are: + + -group_name Name of the security group (required) + -group_description Description of the security group (required) + -vpc_id Virtual private cloud security group ID + (required for VPC security groups) + +For convenience, you may use -name and -description as aliases for +-group_name and -group_description respectively. + +If succcessful, the method returns an object of type +L. + +=cut + +sub create_security_group { + my $self = shift; + my %args = @_; + $args{-group_name} ||= $args{-name}; + $args{-group_description} ||= $args{-description}; + $args{-group_name} && $args{-group_description} + or croak "create_security_group() requires -group_name and -group_description arguments"; + + my @param; + push @param,$self->single_parm($_=>\%args) foreach qw(GroupName GroupDescription VpcId); + my $g = $self->call('CreateSecurityGroup',@param) or return; + return $self->describe_security_groups($g); +} + +=head2 $boolean = $ec2->delete_security_group($group_id) + +=head2 $boolean = $ec2->delete_security_group(-group_id=>$group_id, + -group_name=>$name); + +Delete a security group. Arguments are: + + -group_name Name of the security group + -group_id ID of the security group + +Either -group_name or -group_id is required. In the single-argument +form, the method deletes the security group given by its id. + +If succcessful, the method returns true. + +=cut + +sub delete_security_group { + my $self = shift; + my %args = $self->args(-group_id=>@_); + $args{-group_name} ||= $args{-name}; + my @param = $self->single_parm(GroupName=>\%args); + push @param,$self->single_parm(GroupId=>\%args); + return $self->call('DeleteSecurityGroup',@param); +} + +=head2 $boolean = $ec2->update_security_group($security_group) + +Add one or more incoming firewall rules to a security group. The rules +to add are stored in a L which is created +either by describe_security_groups() or create_security_group(). This method combines +the actions AuthorizeSecurityGroupIngress, +AuthorizeSecurityGroupEgress, RevokeSecurityGroupIngress, and +RevokeSecurityGroupEgress. + +For details, see L. Here is a brief summary: + + $sg = $ec2->create_security_group(-name=>'MyGroup',-description=>'Example group'); + + # TCP on port 80 for the indicated address ranges + $sg->authorize_incoming(-protocol => 'tcp', + -port => 80, + -source_ip => ['192.168.2.0/24','192.168.2.1/24'}); + + # TCP on ports 22 and 23 from anyone + $sg->authorize_incoming(-protocol => 'tcp', + -port => '22..23', + -source_ip => '0.0.0.0/0'); + + # ICMP on echo (ping) port from anyone + $sg->authorize_incoming(-protocol => 'icmp', + -port => 0, + -source_ip => '0.0.0.0/0'); + + # TCP to port 25 (mail) from instances belonging to + # the "Mail relay" group belonging to user 12345678. + $sg->authorize_incoming(-protocol => 'tcp', + -port => 25, + -group => '12345678/Mail relay'); + + $result = $ec2->update_security_group($sg); + +or more simply: + + $result = $sg->update(); + +=cut + +sub update_security_group { + my $self = shift; + my $sg = shift; + my $group_id = $sg->groupId; + my $result = 1; + + for my $action (qw(Authorize Revoke)) { + for my $direction (qw(Ingress Egress)) { + my @permissions = $sg->_uncommitted_permissions($action,$direction) or next; + my $call = "${action}SecurityGroup${direction}"; + my @param = (GroupId=>$group_id); + push @param,$self->_security_group_parm(\@permissions); + my $r = $self->call($call=>@param); + $result &&= $r; + } + } + return $result; +} + +sub _security_group_parm { + my $self = shift; + my $permissions = shift; + my @param; + + for (my $i=0;$i<@$permissions;$i++) { + my $perm = $permissions->[$i]; + my $n = $i+1; + push @param,("IpPermissions.$n.IpProtocol"=>$perm->ipProtocol); + push @param,("IpPermissions.$n.FromPort" => $perm->fromPort); + push @param,("IpPermissions.$n.ToPort" => $perm->toPort); + my @cidr = $perm->ipRanges; + for (my $i=0;$i<@cidr;$i++) { + my $m = $i+1; + push @param,("IpPermissions.$n.IpRanges.$m.CidrIp"=>$cidr[$i]); + } + my @groups = $perm->groups; + for (my $i=0;$i<@groups;$i++) { + my $m = $i+1; + my $group = $groups[$i]; + if (defined $group->groupId) { + push @param,("IpPermissions.$n.Groups.$m.GroupId" => $group->groupId); + } else { + push @param,("IpPermissions.$n.Groups.$m.UserId" => $group->userId); + push @param,("IpPermissions.$n.Groups.$m.GroupName"=> $group->groupName); + } + } + } + return @param; +} + +=head2 $account_id = $ec2->account_id + +Looks up the account ID corresponding to the credentials provided when +the VM::EC2 instance was created. The way this is done is to fetch the +"default" security group, which is guaranteed to exist, and then +return its groupId field. The result is cached so that subsequent +accesses are fast. + +=head2 $account_id = $ec2->userId + +Same as above, for convenience. + +=cut + +sub account_id { + my $self = shift; + return $self->{account_id} if exists $self->{account_id}; + my $sg = $self->describe_security_groups(-group_name=>'default') or return; + return $self->{account_id} ||= $sg->ownerId; +} + +sub userId { shift->account_id } + +=head2 @keys = $ec2->describe_key_pairs(-key_name => \@names, + -filter => \%filters); +=head2 @keys = $ec2->describe_key_pairs(@names); + +Searches for ssh key pairs matching the provided filters and return +a series of VM::EC2::KeyPair objects. + +Optional parameters: + + -key_name A single key name or an arrayref containing a list + of names + -filter Filter on tags and other attributes. + +The full list of key filters can be found at: +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeKeyPairs.html + +=cut + +sub describe_key_pairs { + my $self = shift; + my %args = $self->args(-key_name=>@_); + my @params = $self->list_parm('KeyName',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeKeyPairs',@params); +} + +=head2 $key = $ec2->create_key_pair($name) + +Create a new key pair with the specified name (required). If the key +pair already exists, returns undef. The contents of the new keypair, +including the PEM-encoded private key, is contained in the returned +VM::EC2::KeyPair object: + + my $key = $ec2->create_key_pair('My Keypair'); + if ($key) { + print $key->fingerprint,"\n"; + print $key->privateKey,"\n"; + } + +=cut + +sub create_key_pair { + my $self = shift; + my $name = shift or croak "Usage: create_key_pair(\$name)"; + $name =~ /^[\w _-]+$/ + or croak "Invalid keypair name: must contain only alphanumerics, spaces, dashes and underscores"; + my @params = (KeyName=>$name); + $self->call('CreateKeyPair',@params); +} + +=head2 $key = $ec2->import_key_pair(-key_name=>$name, + -public_key_material=>$public_key) + +=head2 $key = $ec2->import_key_pair($name,$public_key) + +Imports a preexisting public key into AWS under the specified name. +If successful, returns a VM::EC2::KeyPair. The public key must be an +RSA key of length 1024, 2048 or 4096. The method can be called with +two unnamed arguments consisting of the key name and the public key +material, or in a named argument form with the following argument +names: + + -key_name -- desired name for the imported key pair (required) + -name -- shorter version of -key_name + + -public_key_material -- public key data (required) + -public_key -- shorter version of the above + +This example uses Net::SSH::Perl::Key to generate a new keypair, and +then uploads the public key to Amazon. + + use Net::SSH::Perl::Key; + + my $newkey = Net::SSH::Perl::Key->keygen('RSA',1024); + $newkey->write_private('.ssh/MyKeypair.rsa'); # save private parts + + my $key = $ec2->import_key_pair('My Keypair' => $newkey->dump_public) + or die $ec2->error; + print "My Keypair added with fingerprint ",$key->fingerprint,"\n"; + +Several different formats are accepted for the key, including SSH +"authorized_keys" format (generated by L and +Net::SSH::Perl::Key), the SSH public keys format, and DER format. You +do not need to base64-encode the key or perform any other +pre-processing. + +Note that the algorithm used by Amazon to calculate its key +fingerprints differs from the one used by the ssh library, so don't +try to compare the key fingerprints returned by Amazon to the ones +produced by ssh-keygen or Net::SSH::Perl::Key. + +=cut + +sub import_key_pair { + my $self = shift; + my %args; + if (@_ == 2 && $_[0] !~ /^-/) { + %args = (-key_name => shift, + -public_key_material => shift); + } else { + %args = @_; + } + my $name = $args{-key_name} || $args{-name} or croak "-key_name argument required"; + my $pkm = $args{-public_key_material}|| $args{-public_key} or croak "-public_key_material argument required"; + my @params = (KeyName => $name,PublicKeyMaterial=>encode_base64($pkm)); + $self->call('ImportKeyPair',@params); +} + +=head2 $result = $ec2->delete_key_pair($name) + +Deletes the key pair with the specified name (required). Returns true +if successful. + +=cut + +sub delete_key_pair { + my $self = shift; my $name = shift or croak "Usage: delete_key_pair(\$name)"; + $name =~ /^[\w _-]+$/ + or croak "Invalid keypair name: must contain only alphanumerics, spaces, dashes and underscores"; + my @params = (KeyName=>$name); + $self->call('DeleteKeyPair',@params); +} + +=head1 TAGS + +These methods allow you to create, delete and fetch resource tags. You +may find that you rarely need to use these methods directly because +every object produced by VM::EC2 supports a simple tag interface: + + $object = $ec2->describe_volumes(-volume_id=>'vol-12345'); # e.g. + $tags = $object->tags(); + $name = $tags->{Name}; + $object->add_tags(Role => 'Web Server', Status=>'development); + $object->delete_tags(Name=>undef); + +See L for a full description of the uniform object +tagging interface. + +These methods are most useful when creating and deleting tags for +multiple resources simultaneously. + +=head2 @t = $ec2->describe_tags(-filter=>\%filters); + +Return a series of VM::EC2::Tag objects, each describing an +AMI. A single optional -filter argument is allowed. + +Available filters are: key, resource-id, resource-type and value. See +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeTags.html + +=cut + +sub describe_tags { + my $self = shift; + my %args = @_; + my @params = $self->filter_parm(\%args); + return $self->call('DescribeTags',@params); +} + +=head2 $bool = $ec2->create_tags(-resource_id=>\@ids,-tag=>{key1=>value1...}) + +Tags the resource indicated by -resource_id with the tag(s) in in the +hashref indicated by -tag. You may specify a single resource by +passing a scalar resourceId to -resource_id, or multiple resources +using an anonymous array. Returns a true value if tagging was +successful. + +The method name "add_tags()" is an alias for create_tags(). + +You may find it more convenient to tag an object retrieved with any of +the describe() methods using the built-in add_tags() method: + + @snap = $ec2->describe_snapshots(-filter=>{status=>'completed'}); + foreach (@snap) {$_->add_tags(ReadyToUse => 'true')} + +but if there are many snapshots to tag simultaneously, this will be faster: + + @snap = $ec2->describe_snapshots(-filter=>{status=>'completed'}); + $ec2->add_tags(-resource_id=>\@snap,-tag=>{ReadyToUse=>'true'}); + +Note that you can tag volumes, snapshots and images owned by other +people. Only you will be able to see these tags. + +=cut + +sub create_tags { + my $self = shift; + my %args = @_; + $args{-resource_id} or croak "create_tags() -resource_id argument required"; + $args{-tag} or croak "create_tags() -tag argument required"; + my @params = $self->list_parm('ResourceId',\%args); + push @params,$self->tagcreate_parm(\%args); + return $self->call('CreateTags',@params); +} + +sub add_tags { shift->create_tags(@_) } + +=head2 $bool = $ec2->delete_tags(-resource_id=>$id1,-tag=>{key1=>value1...}) + +Delete the indicated tags from the indicated resource. Pass an +arrayref to operate on several resources at once. The tag syntax is a +bit tricky. Use a value of undef to delete the tag unconditionally: + + -tag => { Role => undef } # deletes any Role tag + +Any scalar value will cause the tag to be deleted only if its value +exactly matches the specified value: + + -tag => { Role => 'Server' } # only delete the Role tag + # if it currently has the value "Server" + +An empty string value ('') will only delete the tag if its value is an +empty string, which is probably not what you want. + +Pass an array reference of tag names to delete each of the tag names +unconditionally (same as passing a value of undef): + + $ec2->delete_tags(['Name','Role','Description']); + +You may find it more convenient to delete tags from objects using +their delete_tags() method: + + @snap = $ec2->describe_snapshots(-filter=>{status=>'completed'}); + foreach (@snap) {$_->delete_tags(Role => undef)} + +=cut + +sub delete_tags { + my $self = shift; + my %args = @_; + $args{-resource_id} or croak "create_tags() -resource_id argument required"; + $args{-tag} or croak "create_tags() -tag argument required"; + my @params = $self->list_parm('ResourceId',\%args); + push @params,$self->tagdelete_parm(\%args); + return $self->call('DeleteTags',@params); +} + +=head1 ELASTIC IP ADDRESSES + +The methods in this section allow you to allocate elastic IP +addresses, attach them to instances, and delete them. See +L. + +=head2 @addr = $ec2->describe_addresses(-public_ip=>\@addr,-allocation_id=>\@id,-filter->\%filters) + +=head2 @addr = $ec2->describe_addresses(@public_ips) + +Queries AWS for a list of elastic IP addresses already allocated to +you. All parameters are optional: + + -public_ip -- An IP address (in dotted format) or an arrayref of + addresses to return information about. + -allocation_id -- An allocation ID or arrayref of such IDs. Only + applicable to VPC addresses. + -filter -- A hashref of tag=>value pairs to filter the response + on. + +The list of applicable filters can be found at +http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeAddresses.html. + +This method returns a list of L. + +=cut + +sub describe_addresses { + my $self = shift; + my %args = $self->args(-public_ip=>@_); + my @param; + push @param,$self->list_parm('PublicIp',\%args); + push @param,$self->list_parm('AllocationId',\%args); + push @param,$self->filter_parm(\%args); + return $self->call('DescribeAddresses',@param); +} + +=head2 $address_info = $ec2->allocate_address([-vpc=>1]) + +Request an elastic IP address. Pass -vpc=>1 to allocate a VPC elastic +address. The return object is a VM::EC2::ElasticAddress. + +=cut + +sub allocate_address { + my $self = shift; + my %args = @_; + my @param = $args{-vpc} ? (Domain=>'vpc') : (); + return $self->call('AllocateAddress',@param); +} + +=head2 $boolean = $ec2->release_address($addr) + +Release an elastic IP address. For non-VPC addresses, you may provide +either an IP address string, or a VM::EC2::ElasticAddress. For VPC +addresses, you must obtain a VM::EC2::ElasticAddress first +(e.g. with describe_addresses) and then pass that to the method. + +=cut + +sub release_address { + my $self = shift; + my $addr = shift or croak "Usage: release_address(\$addr)"; + my @param = (PublicIp=>$addr); + if (my $allocationId = eval {$addr->allocationId}) { + push @param,(AllocatonId=>$allocationId); + } + return $self->call('ReleaseAddress',@param); +} + +=head2 $result = $ec2->associate_address($elastic_addr => $instance_id) + +Associate an elastic address with an instance id. Both arguments are +mandatory. If you are associating a VPC elastic IP address with the +instance, the result code will indicate the associationId. Otherwise +it will be a simple perl truth value ("1") if successful, undef if +false. + +If this is an ordinary EC2 Elastic IP address, the first argument may +either be an ordinary string (xx.xx.xx.xx format) or a +VM::EC2::ElasticAddress object. However, if it is a VPC elastic +IP address, then the argument must be a VM::EC2::ElasticAddress +as returned by describe_addresses(). The reason for this is that the +allocationId must be retrieved from the object in order to use in the +call. + +=cut + +sub associate_address { + my $self = shift; + @_ == 2 or croak "Usage: associate_address(\$elastic_addr => \$instance_id)"; + my ($addr,$instance) = @_; + + my @param = (InstanceId=>$instance); + push @param,eval {$addr->domain eq 'vpc'} ? (AllocationId => $addr->allocationId) + : (PublicIp => $addr); + return $self->call('AssociateAddress',@param); +} + +=head2 $bool = $ec2->disassociate_address($elastic_addr) + +Disassociate an elastic address from whatever instance it is currently +associated with, if any. The result will be true if disassociation was +successful. + +If this is an ordinary EC2 Elastic IP address, the argument may +either be an ordinary string (xx.xx.xx.xx format) or a +VM::EC2::ElasticAddress object. However, if it is a VPC elastic +IP address, then the argument must be a VM::EC2::ElasticAddress +as returned by describe_addresses(). The reason for this is that the +allocationId must be retrieved from the object in order to use in the +call. + + +=cut + +sub disassociate_address { + my $self = shift; + @_ == 1 or croak "Usage: associate_address(\$elastic_addr)"; + my $addr = shift; + + my @param = eval {$addr->domain eq 'vpc'} ? (AssociationId => $addr->associationId) + : (PublicIp => $addr); + return $self->call('DisassociateAddress',@param); +} + +=head1 RESERVED INSTANCES + +These methods apply to describing, purchasing and using Reserved Instances. + +=head2 @offerings = $ec2->describe_reserved_instances_offerings(@offering_ids) + +=head2 @offerings = $ec2->describe_reserved_instances_offerings(%args) + +This method returns a list of the reserved instance offerings +currently available for purchase. The arguments allow you to filter +the offerings according to a variety of filters. + +All arguments are optional. If no named arguments are used, then the +arguments are treated as Reserved Instance Offering IDs. + + -reserved_instances_offering_id A scalar or arrayref of reserved + instance offering IDs + + -instance_type The instance type on which the + reserved instance can be used, + e.g. "c1.medium" + + -availability_zone, -zone The availability zone in which the + reserved instance can be used. + + -product_description The reserved instance description. + Valid values are "Linux/UNIX", + "Linux/UNIX (Amazon VPC)", + "Windows", and "Windows (Amazon + VPC)" + + -instance_tenancy The tenancy of the reserved instance + offering, either "default" or + "dedicated". (VPC instances only) + + -filter A set of filters to apply. + +For available filters, see http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeReservedInstancesOfferings.html. + +The returned objects are of type L + +This can be combined with the Offering purchase() method as shown here: + + @offerings = $ec2->describe_reserved_instances_offerings( + {'availability-zone' => 'us-east-1a', + 'instance-type' => 'c1.medium', + 'product-description' =>'Linux/UNIX', + 'duration' => 31536000, # this is 1 year + }); + $offerings[0]->purchase(5) and print "Five reserved instances purchased\n"; + +=cut + +sub describe_reserved_instances_offerings { + my $self = shift; + my %args = $self->args('-reserved_instances_offering_id',@_); + $args{-availability_zone} ||= $args{-zone}; + my @param = $self->list_parm('ReservedInstancesOfferingId',\%args); + push @param,$self->single_parm('ProductDescription',\%args); + push @param,$self->single_parm('InstanceType',\%args); + push @param,$self->single_parm('AvailabilityZone',\%args); + push @param,$self->single_parm('InstanceTenancy',\%args); # should initial "i" be upcase? + push @param,$self->filter_parm(\%args); + return $self->call('DescribeReservedInstancesOfferings',@param); +} + +=head $id = $ec2->purchase_reserved_instances_offering($offering_id) + +=head $id = $ec2->purchase_reserved_instances_offering(%args) + +Purchase one or more reserved instances based on an offering. + +Arguments: + + -reserved_instances_offering_id, -id -- The reserved instance offering ID + to purchase (required). + + -instance_count, -count -- Number of instances to reserve + under this offer (optional, defaults + to 1). + + +Returns a Reserved Instances Id on success, undef on failure. Also see the purchase() method of +L. + +=cut + +sub purchase_reserved_instances_offering { + my $self = shift; + my %args = $self->args('-reserved_instances_offering_id'=>@_); + $args{-reserved_instances_offering_id} ||= $args{-id}; + $args{-reserved_instances_offering_id} or + croak "purchase_reserved_instances_offering(): the -reserved_instances_offering_id argument is required"; + $args{-instance_count} ||= $args{-count}; + my @param = $self->single_parm('ReservedInstancesOfferingId',\%args); + push @param,$self->single_parm('InstanceCount',\%args); + return $self->call('PurchaseReservedInstancesOffering',@param); +} + +=head2 @res_instances = $ec2->describe_reserved_instances(@res_instance_ids) + +=head2 @res_instances = $ec2->describe_reserved_instances(%args) + +This method returns a list of the reserved instances that you +currently own. The information returned includes the type of +instances that the reservation allows you to launch, the availability +zone, and the cost per hour to run those reserved instances. + +All arguments are optional. If no named arguments are used, then the +arguments are treated as Reserved Instance IDs. + + -reserved_instances_id -- A scalar or arrayref of reserved + instance IDs + + -filter -- A set of filters to apply. + +For available filters, see http://docs.amazonwebservices.com/AWSEC2/2011-05-15/APIReference/ApiReference-query-DescribeReservedInstances.html. + +The returned objects are of type L + +=cut + +sub describe_reserved_instances { + my $self = shift; + my %args = $self->args('-reserved_instances_id',@_); + my @param = $self->list_parm('ReservedInstancesId',\%args); + push @param,$self->filter_parm(\%args); + return $self->call('DescribeReservedInstances',@param); +} + +=head1 SPOT INSTANCES + +These methods allow you to request spot instances and manipulte spot +data feed subscriptoins. + +=cut + +=head2 $subscription = $ec2->create_spot_datafeed_subscription($bucket,$prefix) + +This method creates a spot datafeed subscription. Provide the method with the +name of an S3 bucket associated with your account, and a prefix to be appended +to the files written by the datafeed. Spot instance usage logs will be written +into the requested bucket, and prefixed with the desired prefix. + +If no prefix is specified, it defaults to "SPOT_DATAFEED_"; + +On success, a VM::EC2::Spot:DatafeedSubscription object is returned; + +Only one datafeed is allowed per account; + +=cut + +sub create_spot_datafeed_subscription { + my $self = shift; + my ($bucket,$prefix) = @_; + $bucket or croak "Usage: create_spot_datafeed_subscription(\$bucket,\$prefix)"; + $prefix ||= 'SPOT_DATAFEED_'; + my @param = (Bucket => $bucket, + Prefix => $prefix); + return $self->call('CreateSpotDatafeedSubscription',@param); +} + +=head2 $boolean = $ec2->delete_spot_datafeed_subscription() + +This method delete's the current account's spot datafeed +subscription, if any. It takes no arguments. + +On success, it returns true. + +=cut + +sub delete_spot_datafeed_subscription { + my $self = shift; + return $self->call('DeleteSpotDatafeedSubscription'); +} + +=head2 $subscription = $ec2->describe_spot_datafeed_subscription() + +This method describes the current account's spot datafeed +subscription, if any. It takes no arguments. + +On success, a VM::EC2::Spot:DatafeedSubscription object is returned; + +=cut + +sub describe_spot_datafeed_subscription { + my $self = shift; + return $self->call('DescribeSpotDatafeedSubscription'); +} + +=head2 @spot_price_history = $ec2->describe_spot_price_history(@filters) + +This method applies the specified filters to spot instances and +returns a list of instances, timestamps and their price at the +indicated time. Each spot price history point is represented as a +VM::EC2::Spot::PriceHistory object. + +Option parameters are: + + -start_time Start date and time of the desired history + data, in the form yyyy-mm-ddThh:mm:ss (GMT). + The Perl DateTime module provides a convenient + way to create times in this format. + + -end_time End date and time of the desired history + data. + + -instance_type The instance type, e.g. "m1.small", can be + a scalar value or an arrayref. + + -product_description The product description. One of "Linux/UNIX", + "SUSE Linux" or "Windows". Can be a scalar value + or an arrayref. + + -availability_zone A single availability zone, such as "us-east-1a". + + -max_results Maximum number of rows to return in a single + call. + + -next_token Specifies the next set of results to return; used + internally. + + -filter Hashref containing additional filters to apply, + +The following filters are recognized: "instance-type", +"product-description", "spot-price", "timestamp", +"availability-zone". The '*' and '?' wildcards can be used in filter +values, but numeric comparison operations are not supported by the +Amazon API. Note that wildcards are not generally allowed in the +standard options. Hence if you wish to get spot price history in all +availability zones in us-east, this will work: + + $ec2->describe_spot_price_history(-filter=>{'availability-zone'=>'us-east*'}) + +but this will return an invalid parameter error: + + $ec2->describe_spot_price_history(-availability_zone=>'us-east*') + +If you specify -max_results, then the list of history objects returned +may not represent the complete result set. In this case, the method +more_spot_prices() will return true. You can then call +describe_spot_price_history() repeatedly with no arguments in order to +retrieve the remainder of the results. When there are no more results, +more_spot_prices() will return false. + + my @results = $ec2->describe_spot_price_history(-max_results => 20, + -instance_type => 'm1.small', + -availability_zone => 'us-east*', + -product_description=>'Linux/UNIX'); + print_history(\@results); + while ($ec2->more_spot_prices) { + @results = $ec2->describe_spot_price_history + print_history(\@results); + } + +=cut + +sub more_spot_prices { + my $self = shift; + return $self->{spot_price_history_token} && + !$self->{spot_price_history_stop}; +} + +sub describe_spot_price_history { + my $self = shift; + my @parms; + + if ($self->{spot_price_history_stop}) { + delete $self->{spot_price_history_stop}; + return; + } + + if (!@_ && $self->{spot_price_history_token} && $self->{price_history_args}) { + @parms = (@{$self->{price_history_args}},NextToken=>$self->{spot_price_history_token}); + } + + else { + my %args = $self->args('-filter',@_); + push @parms,$self->single_parm($_,\%args) + foreach qw(StartTime EndTime MaxResults AvailabilityZone); + push @parms,$self->list_parm($_,\%args) + foreach qw(InstanceType ProductDescription); + push @parms,$self->filter_parm(\%args); + + if ($args{-max_results}) { + $self->{spot_price_history_token} = 'xyzzy'; # dummy value + $self->{price_history_args} = \@parms; + } + } + + return $self->call('DescribeSpotPriceHistory',@parms); +} + +=head2 @requests = $ec2->request_spot_instances(%param) + +This method will request one or more spot instances to be launched +when the current spot instance run-hour price drops below a preset +value and terminated when the spot instance run-hour price exceeds the +value. + +On success, will return a series of VM::EC2::Spot::InstanceRequest +objects, one for each instance specified in -instance_count. + +=over 4 + +=item Required parameters: + + -spot_price The desired spot price, in USD. + + -image_id ID of an AMI to launch + + -instance_type Type of the instance(s) to launch, such as "m1.small" + +=item Optional parameters: + + -instance_count Maximum number of instances to launch (default 1) + + -type Spot instance request type; one of "one-time" or "persistent" + + -valid_from Date/time the request becomes effective, in format + yyyy-mm-ddThh:mm:ss. Default is immediately. + + -valid_until Date/time the request expires, in format + yyyy-mm-ddThh:mm:ss. Default is to remain in + effect indefinitely. + + -launch_group Name of the launch group. Instances in the same + launch group are started and terminated together. + Default is to launch instances independently. + + -availability_zone_group If specified, all instances that are given + the same zone group name will be launched into the + same availability zone. This is independent of + the -availability_zone argument, which specifies + a particular availability zone. + + -key_name Name of the keypair to use + + -security_group_id Security group ID to use for this instance. + Use an arrayref for multiple group IDs + + -security_group Security group name to use for this instance. + Use an arrayref for multiple values. + + -user_data User data to pass to the instances. Do NOT base64 + encode this. It will be done for you. + + -availability_zone The availability zone you want to launch the + instance into. Call $ec2->regions for a list. + -zone Short version of -availability_aone. + + -placement_group An existing placement group to launch the + instance into. Applicable to cluster instances + only. + -placement_tenancy Specify 'dedicated' to launch the instance on a + dedicated server. Only applicable for VPC + instances. + + -kernel_id ID of the kernel to use for the instances, + overriding the kernel specified in the image. + + -ramdisk_id ID of the ramdisk to use for the instances, + overriding the ramdisk specified in the image. + + -block_devices Specify block devices to map onto the instances, + overriding the values specified in the image. + See run_instances() for the syntax of this argument. + + -block_device_mapping Alias for -block_devices. + + -monitoring Pass a true value to enable detailed monitoring. + + -subnet_id Subnet ID in which to place instances launched under + this request (VPC only). + + -addressing_type Deprecated and undocumented, but present in the + current EC2 API documentation. + +=cut + +sub request_spot_instances { + my $self = shift; + my %args = @_; + $args{-spot_price} or croak "-spot_price argument missing"; + $args{-image_id} or croak "-image_id argument missing"; + $args{-instance_type} or croak "-instance_type argument missing"; + + $args{-availability_zone} ||= $args{-zone}; + $args{-availability_zone} ||= $args{-placement_zone}; + + my @p = map {$self->single_parm($_,\%args)} + qw(SpotPrice InstanceCount Type ValidFrom ValidUntil LaunchGroup AvailabilityZoneGroup); + + # oddly enough, the following args need to be prefixed with "LaunchSpecification." + my @launch_spec = map {$self->single_parm($_,\%args)} + qw(ImageId KeyName UserData AddressingType InstanceType KernelId RamdiskId SubnetId); + push @launch_spec, map {$self->list_parm($_,\%args)} + qw(SecurityGroup SecurityGroupId); + push @launch_spec, $self->block_device_parm($args{-block_devices}||$args{-block_device_mapping}); + + while (my ($key,$value) = splice(@launch_spec,0,2)) { + push @p,("LaunchSpecification.$key" => $value); + } + + # a few more oddballs + push @p,('LaunchSpecification.Placement.AvailabilityZone'=>$args{-availability_zone}) + if $args{-availability_zone}; + push @p,('Placement.GroupName' =>$args{-placement_group}) if $args{-placement_group}; + push @p,('LaunchSpecification.Monitoring.Enabled' => 'true') if $args{-monitoring}; + return $self->call('RequestSpotInstances',@p); +} + +=head2 @requests = $ec2->cancel_spot_instance_requests(@request_ids) + +This method cancels the pending requests. It does not terminate any +instances that are already running as a result of the requests. It +returns a list of VM::EC2::Spot::InstanceRequest objects, whose fields +will be unpopulated except for spotInstanceRequestId and state. + +=cut + +sub cancel_spot_instance_requests { + my $self = shift; + my %args = $self->args('-spot_instance_request_id',@_); + my @parm = $self->list_parm('SpotInstanceRequestId',\%args); + return $self->call('CancelSpotInstanceRequests',@parm); +} + + +=head2 @requests = $ec2->describe_spot_instance_requests(-spot_instance_request_id=>\@ids,-filter=>\%filters) + +=head2 @requests = $ec2->describe_spot_instance_requests(@spot_instance_request_ids) + +=head2 @requests = $ec2->describe_spot_instance_requests(\%filters) + +This method will return information about current spot instance +requests as a list of VM::EC2::Spot::InstanceRequest objects. + +Optional parameters: + + -spot_instance_request_id -- Scalar or arrayref of request Ids. + + -filter -- Tags and other filters to apply. + +There are many filters available, described fully at http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/index.html?ApiReference-ItemType-SpotInstanceRequestSetItemType.html: + + availability-zone-group + create-time + fault-code + fault-message + instance-id + launch-group + launch.block-device-mapping.delete-on-termination + launch.block-device-mapping.device-name + launch.block-device-mapping.snapshot-id + launch.block-device-mapping.volume-size + launch.group-id + launch.image-id + launch.instance-type + launch.kernel-id + launch.key-name + launch.monitoring-enabled + launch.ramdisk-id + product-description + spot-instance-request-id + spot-price + state + tag-key + tag-value + tag: + type + launched-availability-zone + valid-from + valid-until + +=cut + + +sub describe_spot_instance_requests { + my $self = shift; + my %args = $self->args('-spot_instance_request_id',@_); + my @params = $self->list_parm('SpotInstanceRequestId',\%args); + push @params,$self->filter_parm(\%args); + return $self->call('DescribeSpotInstanceRequests',@params); +} + + + + +# ------------------------------------------------------------------------------------------ + +=head1 INTERNAL METHODS + +These methods are used internally and are listed here without +documentation (yet). + +=head2 $underscore_name = $ec2->canonicalize($mixedCaseName) + +=cut + +sub canonicalize { + my $self = shift; + my $name = shift; + while ($name =~ /\w[A-Z]/) { + $name =~ s/([a-zA-Z])([A-Z])/\L$1_$2/g or last; + } + return '-'.lc $name; +} + +sub uncanonicalize { + my $self = shift; + my $name = shift; + $name =~ s/_([a-z])/\U$1/g; + return $name; +} + +=head2 $instance_id = $ec2->instance_parm(@args) + +=cut + +sub instance_parm { + my $self = shift; + my %args; + if ($_[0] =~ /^-/) { + %args = @_; + } else { + %args = (-instance_id => shift); + } + my $id = $args{-instance_id}; + return ref $id && ref $id eq 'ARRAY' ? @$id : $id; +} + +=head2 @parameters = $ec2->value_parm(ParameterName => \%args) + +=cut + +sub value_parm { + my $self = shift; + my ($argname,$args) = @_; + my $name = $self->canonicalize($argname); + return unless exists $args->{$name} || exists $args->{"-$argname"}; + my $val = $args->{$name} || $args->{"-$argname"}; + return ("$argname.Value"=>$val); +} + +=head2 @parameters = $ec2->single_parm(ParameterName => \%args) + +=cut + +sub single_parm { + my $self = shift; + my ($argname,$args) = @_; + my $name = $self->canonicalize($argname); + my $val = $args->{$name} || $args->{"-$argname"}; + defined $val or return; + my $v = ref $val && ref $val eq 'ARRAY' ? $val->[0] : $val; + return ($argname=>$v); +} + +=head2 @parameters = $ec2->list_parm(ParameterName => \%args) + +=cut + +sub list_parm { + my $self = shift; + my ($argname,$args) = @_; + my $name = $self->canonicalize($argname); + + my @params; + if (my $a = $args->{$name}||$args->{"-$argname"}) { + my $c = 1; + for (ref $a && ref $a eq 'ARRAY' ? @$a : $a) { + push @params,("$argname.".$c++ => $_); + } + } + + return @params; +} + +=head2 @parameters = $ec2->filter_parm(\%args) + +=cut + +sub filter_parm { + my $self = shift; + my $args = shift; + return $self->key_value_parameters('Filter','Name','Value',$args); +} + +=head2 @parameters = $ec2->tagcreate_parm(\%args) + +=cut + +sub tagcreate_parm { + my $self = shift; + my $args = shift; + return $self->key_value_parameters('Tag','Key','Value',$args); +} + +=head2 @parameters = $ec2->tagdelete_parm(\%args) + +=cut + +sub tagdelete_parm { + my $self = shift; + my $args = shift; + return $self->key_value_parameters('Tag','Key','Value',$args,1); +} + +=head2 @parameters = $ec2->key_value_parm($param_name,$keyname,$valuename,\%args,$skip_undef_values) + +=cut + +sub key_value_parameters { + my $self = shift; + # e.g. 'Filter', 'Name','Value',{-filter=>{a=>b}} + my ($parameter_name,$keyname,$valuename,$args,$skip_undef_values) = @_; + my $arg_name = $self->canonicalize($parameter_name); + + my @params; + if (my $a = $args->{$arg_name}||$args->{"-$parameter_name"}) { + my $c = 1; + if (ref $a && ref $a eq 'HASH') { + while (my ($name,$value) = each %$a) { + push @params,("$parameter_name.$c.$keyname" => $name); + if (ref $value && ref $value eq 'ARRAY') { + for (my $m=1;$m<=@$value;$m++) { + push @params,("$parameter_name.$c.$valuename.$m" => $value->[$m-1]) + } + } else { + push @params,("$parameter_name.$c.$valuename" => $value) + unless !defined $value && $skip_undef_values; + } + $c++; + } + } else { + for (ref $a ? @$a : $a) { + my ($name,$value) = /([^=]+)\s*=\s*(.+)/; + push @params,("$parameter_name.$c.$keyname" => $name); + push @params,("$parameter_name.$c.$valuename" => $value) + unless !defined $value && $skip_undef_values; + $c++; + } + } + } + + return @params; +} + +=head2 @parameters = $ec2->launch_perm_parm($prefix,$suffix,$value) + +=cut + +sub launch_perm_parm { + my $self = shift; + my ($prefix,$suffix,$value) = @_; + return unless defined $value; + $self->_perm_parm('LaunchPermission',$prefix,$suffix,$value); +} + +sub create_volume_perm_parm { + my $self = shift; + my ($prefix,$suffix,$value) = @_; + return unless defined $value; + $self->_perm_parm('CreateVolumePermission',$prefix,$suffix,$value); +} + +sub _perm_parm { + my $self = shift; + my ($base,$prefix,$suffix,$value) = @_; + return unless defined $value; + my @list = ref $value && ref $value eq 'ARRAY' ? @$value : $value; + my $c = 1; + my @param; + for my $v (@list) { + push @param,("$base.$prefix.$c.$suffix" => $v); + $c++; + } + return @param; +} + +=head2 @parameters = $ec2->block_device_parm($block_device_mapping_string) + +=cut + +sub block_device_parm { + my $self = shift; + my $devlist = shift or return; + + my @dev = ref $devlist && ref $devlist eq 'ARRAY' ? @$devlist : $devlist; + + my @p; + my $c = 1; + for my $d (@dev) { + $d =~ /^([^=]+)=([^=]+)$/ or croak "block device mapping must be in format /dev/sdXX=device-name, got '$d'"; + + my ($devicename,$blockdevice) = ($1,$2); + push @p,("BlockDeviceMapping.$c.DeviceName"=>$devicename); + + if ($blockdevice =~ /^vol-/) { # this is a volume, and not a snapshot + my ($volume,$delete_on_term) = split ':',$blockdevice; + push @p,("BlockDeviceMapping.$c.Ebs.VolumeId" => $volume); + push @p,("BlockDeviceMapping.$c.Ebs.DeleteOnTermination"=>$delete_on_term) + if defined $delete_on_term && $delete_on_term=~/^(true|false|1|0)$/ + } + elsif ($blockdevice eq 'none') { + push @p,("BlockDeviceMapping.$c.NoDevice" => ''); + } elsif ($blockdevice =~ /^ephemeral\d$/) { + push @p,("BlockDeviceMapping.$c.VirtualName"=>$blockdevice); + } else { + my ($snapshot,$size,$delete_on_term) = split ':',$blockdevice; + push @p,("BlockDeviceMapping.$c.Ebs.SnapshotId" =>$snapshot) if $snapshot; + push @p,("BlockDeviceMapping.$c.Ebs.VolumeSize" =>$size) if $size; + push @p,("BlockDeviceMapping.$c.Ebs.DeleteOnTermination"=>$delete_on_term) + if defined $delete_on_term && $delete_on_term=~/^(true|false|1|0)$/ + } + $c++; + } + return @p; +} + +sub boolean_parm { + my $self = shift; + my ($argname,$args) = @_; + my $name = $self->canonicalize($argname); + return unless exists $args->{$name} || exists $args->{$argname}; + my $val = $args->{$name} || $args->{$argname}; + return ($argname => $val ? 'true' : 'false'); +} + +=head2 $version = $ec2->version() + +API version. + +=cut + +sub version { '2011-05-15' } + +=head2 $ts = $ec2->timestamp + +=cut + +sub timestamp { + return strftime("%Y-%m-%dT%H:%M:%SZ",gmtime); +} + + +=head2 $ua = $ec2->ua + +LWP::UserAgent object. + +=cut + +sub ua { + my $self = shift; + return $self->{ua} ||= LWP::UserAgent->new; +} + +=head2 @obj = $ec2->call($action,@param); + +Make a call to Amazon using $action and the passed parameters, and +return a list of objects. + +=cut + +sub call { + my $self = shift; + my $response = $self->make_request(@_); + + unless ($response->is_success) { + my $content = $response->decoded_content; + my $error; + if ($content =~ //) { + $error = VM::EC2::Dispatch->create_error_object($response->decoded_content,$self); + } else { + my $code = $response->status_line; + my $msg = $response->decoded_content; + $error = VM::EC2::Error->new({Code=>$code,Message=>$msg},$self); + } + $self->error($error); + carp "$error" if $self->print_error; + croak "$error" if $self->raise_error; + return; + } + + $self->error(undef); + my @obj = VM::EC2::Dispatch->response2objects($response,$self); + + # slight trick here so that we return one object in response to + # describe_images(-image_id=>'foo'), rather than the number "1" + if (!wantarray) { # scalar context + return $obj[0] if @obj == 1; + return if @obj == 0; + return @obj; + } else { + return @obj; + } +} + +=head2 $request = $ec2->make_request($action,@param); + +Set up the signed HTTP::Request object. + +=cut + +sub make_request { + my $self = shift; + my ($action,@args) = @_; + my $request = $self->_sign(Action=>$action,@args); + return $self->ua->request($request); +} + +=head2 $request = $ec2->_sign(@args) + +Create and sign an HTTP::Request. + +=cut + +# adapted from Jeff Kim's Net::Amazon::EC2 module +sub _sign { + my $self = shift; + my @args = @_; + + my $action = 'POST'; + my $host = lc URI->new($self->endpoint)->host; + my $path = '/'; + + my %sign_hash = @args; + $sign_hash{AWSAccessKeyId} = $self->id; + $sign_hash{Timestamp} = $self->timestamp; + $sign_hash{Version} = $self->version; + $sign_hash{SignatureVersion} = 2; + $sign_hash{SignatureMethod} = 'HmacSHA256'; + + my @param; + my @parameter_keys = sort keys %sign_hash; + for my $p (@parameter_keys) { + push @param,join '=',map {uri_escape($_,"^A-Za-z0-9\-_.~")} ($p,$sign_hash{$p}); + } + my $to_sign = join("\n", + $action,$host,$path,join('&',@param)); + my $signature = encode_base64(hmac_sha256($to_sign,$self->secret),''); + $sign_hash{Signature} = $signature; + + my $uri = URI->new($self->endpoint); + $uri->query_form(\%sign_hash); + + return POST $self->endpoint,[%sign_hash]; +} + +=head2 @param = $ec2->args(ParamName=>@_) + +Set up calls that take either method(-resource_id=>'foo') or method('foo'). + +=cut + +sub args { + my $self = shift; + my $default_param_name = shift; + return unless @_; + return @_ if $_[0] =~ /^-/; + return (-filter=>shift) if @_==1 && ref $_[0] && ref $_[0] eq 'HASH'; + return ($default_param_name => \@_); +} + +=head1 MISSING METHODS + +As of 27 July 2011, the following Amazon API calls were NOT implemented: + +AssociateDhcpOptions +AssociateRouteTable +AttachInternetGateway +AttachVpnGateway +BundleInstance +CancelBundleTask +CancelConversionTask +CancelSpotInstanceRequests +ConfirmProductInstance +CreateCustomerGateway +CreateDhcpOptions +CreateInternetGateway +CreateNetworkAcl +CreateNetworkAclEntry +CreatePlacementGroup +CreateRoute +CreateRouteTable +CreateSpotDatafeedSubscription +CreateSubnet +CreateVpc +CreateVpnConnection +CreateVpnGateway +DeleteCustomerGateway +DeleteDhcpOptions +DeleteInternetGateway +DeleteNetworkAcl +DeleteNetworkAclEntry +DeletePlacementGroup +DeleteRoute +DeleteRouteTable +DeleteSpotDatafeedSubscription +DeleteSubnet +DeleteVpc +DeleteVpnConnection +DeleteVpnGateway +DescribeBundleTasks +DescribeConversionTasks +DescribeCustomerGateways +DescribeDhcpOptions +DescribeNetworkAcls +DescribePlacementGroups +DescribeRouteTables +DescribeSpotDatafeedSubscription +DescribeSpotInstanceRequests +DescribeSpotPriceHistory +DescribeSubnets +DescribeVpcs +DescribeVpnConnections +DescribeVpnGateways +DetachInternetGateway +DetachVpnGateway +DisassociateRouteTable +ImportInstance +ReplaceNetworkAclAssociation +ReplaceNetworkAclEntry +ReplaceRoute +ReplaceRouteTableAssociation +RequestSpotInstances + +=head1 OTHER INFORMATION + +This section contains technical information that may be of interest to developers. + +=head2 Signing and authentication protocol + +This module uses Amazon AWS signing protocol version 2, as described +at +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?using-query-api.html. It +uses the HmacSHA256 signature method, which is the most secure method +currently available. For additional security, use "https" for the +communications endpoint: + + $ec2 = VM::EC2->new(-endpoint=>'https://ec2.amazonaws.com'); + +=head2 Subclassing VM::EC2 objects + +To subclass VM::EC2 objects (or implement your own from scratch) you +will need to override the object dispatch mechanism. Fortunately this +is very easy. After "use VM::EC2" call +VM::EC2::Dispatch->add_override() one or more times: + + VM::EC2::Dispatch->add_override($call_name => $dispatch). + +The first argument, $call_name, is name of the Amazon API call, such as "DescribeImages". + +The second argument, $dispatch, instructs VM::EC2::Dispatch how to +create objects from the parsed XML. There are three possible syntaxes: + + 1) A CODE references, such as an anonymous subroutine. + + In this case the code reference will be invoked to handle the + parsed XML returned from the request. The code will receive + two arguments consisting of the parsed + content of the response, and the VM::EC2 object used to generate the + request. + + 2) A VM::EC2::Dispatch method name, optionally followed by its parameters + delimited by commas. Example: + + "fetch_items,securityGroupInfo,VM::EC2::SecurityGroup" + + This tells Dispatch to invoke its fetch_items() method with + the following arguments: + + $dispatch->fetch_items($parsed_xml,$ec2,'securityGroupInfo','VM::EC2::SecurityGroup') + + The fetch_items() method is used for responses in which a + list of objects is embedded within a series of tags. + See L for more information. + + Other commonly-used methods are "fetch_one", and "boolean". + + 3) A class name, such as 'MyVolume' + + In this case, class MyVolume is loaded and then its new() method + is called with the four arguments ($parsed_xml,$ec2,$xmlns,$requestid), + where $parsed_xml is the parsed XML response, $ec2 is the VM::EC2 + object that generated the request, $xmlns is the XML namespace + of the XML response, and $requestid is the AWS-generated ID for the + request. Only the first two arguments are really useful. + + I suggest you inherit from VM::EC2::Generic and use the inherited new() + method to store the parsed XML object and other arguments. + +Dispatch tries each of (1), (2) and (3), in order. This means that +class names cannot collide with method names. + +The parsed content is the result of passing the raw XML through a +XML::Simple object created with: + + XML::Simple->new(ForceArray => ['item'], + KeyAttr => ['key'], + SuppressEmpty => undef); + +In general, this will give you a hash of hashes. Any tag named 'item' +will be forced to point to an array reference, and any tag named "key" +will be flattened as described in the XML::Simple documentation. + +A simple way to examine the raw parsed XML is to invoke any +VM::EC2::Generic's as_string() method: + + my ($i) = $ec2->describe_instances; + print $i->as_string; + +This will give you a Data::Dumper representation of the XML after it +has been parsed. + +The suggested way to override the dispatch table is from within a +subclass of VM::EC2: + + package 'VM::EC2New'; + use base 'VM::EC2'; + sub new { + my $self=shift; + VM::EC2::Dispatch->add_override('call_name_1'=>\&subroutine1). + VM::EC2::Dispatch->add_override('call_name_2'=>\&subroutine2). + $self->SUPER::new(@_); + } + +See L for a working example of subclassing VM::EC2 +and one of its object classes. + +=head1 DEVELOPING + +The git source for this library can be found at https://github.com/lstein/LibVM-EC2-Perl, +To contribute to development, please obtain a github account and then either: + + 1) Fork a copy of the repository, make your changes against this repository, + and send a pull request to me to incorporate your changes. + + 2) Contact me by email and ask for push privileges on the repository. + +See http://help.github.com/ for help getting started. + +=head1 SEE ALSO + +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/AvailabilityZone.pm b/perl/share/perl/5.10.1/VM/EC2/AvailabilityZone.pm new file mode 100644 index 0000000..69d9ae6 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/AvailabilityZone.pm @@ -0,0 +1,80 @@ +package VM::EC2::AvailabilityZone; + +=head1 NAME + +VM::EC2::AvailabilityZone - Object describing an Amazon availability zone + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @zones = $ec2->describe_availability_zones(-filter=>{state=>'available'}); + + $zone = $zones[0]; + $name = $zone->zoneName; + @messages= $zone->messages; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 availability zone, and is returned +by VM::EC2->describe_availability_zones(). + +=head1 METHODS + +These object methods are supported: + + zoneName -- Name of the zone, e.g. "eu-west-1a" + zoneState -- State of the availability zone, e.g. "available" + regionName -- Name of the region + region -- A VM::EC2::Region object corresponding to regionName + messages -- A list of messages about the zone + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +zoneName. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {shift->zoneName} + +sub valid_fields { + my $self = shift; + return qw(zoneName zoneState regionName messageSet); +} + +sub messages { + my $self = shift; + my $m = $self->messageSet or return; + return map {$_->{message}} @{$m->{item}}; +} + +sub region { + my $self = shift; + my $r = $self->regionName; + return $self->aws->describe_regions($r); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/BlockDevice.pm b/perl/share/perl/5.10.1/VM/EC2/BlockDevice.pm new file mode 100644 index 0000000..b59a404 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/BlockDevice.pm @@ -0,0 +1,120 @@ +package VM::EC2::BlockDevice; + +=head1 NAME + +VM::EC2::BlockDevice - Object describing how to construct an EC2 block device when launching an image + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $image = $ec2->describe_images(-image_id=>'ami-123456'); + my @devices = $image->blockDeviceMapping; + for my $d (@devices) { + my $virtual_device = $d->deviceName; + my $snapshot_id = $d->snapshotId; + my $volume_size = $d->volumeSize; + my $delete = $d->deleteOnTermination; + } + +=head1 DESCRIPTION + +This object represents an Amazon block device associated with an AMI. +The information in it is used to create a new volume when the AMI is launched. +The object is returned by VM::EC2->describe_images(). + +Please see L for methods shared by all VM::EC2 +objects. + +=head1 METHODS + +These object methods are supported: + + deviceName -- name of the device, such as /dev/sda1 + virtualName -- virtual device name, such as "ephemeral0" + noDevice -- true if no device associated + ebs -- parameters used to automatically set up Amazon EBS + volumes when an instance is booted. This returns + a VM::EC2::BlockDevice::EBS object. + +For your convenience, a number of the ebs() object's methods are +passed through: + + snapshotId -- ID of the snapshot used to create this EBS when an + instance is launched from this image. + volumeSize -- Size of the EBS volume (in gigs). + deleteOnTermination -- Whether this EBS will be deleted when the + instance terminates. + +=head1 STRING OVERLOADING + +When used in a string context, this object will be interpolated as: + + deviceName=snapshotId:volumeSize:deleteOnTermination + +e.g. + + /dev/sdg=snap-12345:20:true + +This happens to be the same syntax used to specify block device +mappings in run_instances(). See L. + +=head1 SEE ALSO + +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::BlockDevice::EBS; + +use overload '""' => sub {shift()->as_string}, + fallback => 1; + +sub valid_fields { + my $self = shift; + return qw(deviceName virtualName ebs); +} + +sub noDevice { + my $self = shift; + return exists $self->payload->{noDevice}; +} + +sub ebs { + my $self = shift; + return $self->{ebs} = VM::EC2::BlockDevice::EBS->new($self->SUPER::ebs,$self->aws); +} + +sub snapshotId { shift->ebs->snapshotId } +sub volumeSize { shift->ebs->volumeSize } +sub deleteOnTermination { shift->ebs->deleteOnTermination } + +sub as_string { + my $self = shift; + my $dot = $self->deleteOnTermination ? 'true' : 'false'; + return $self->deviceName.'='. + join ':',$self->snapshotId,$self->volumeSize,$dot; +} + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Attachment.pm b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Attachment.pm new file mode 100644 index 0000000..1d35021 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Attachment.pm @@ -0,0 +1,168 @@ +package VM::EC2::BlockDevice::Attachment; + +=head1 NAME + +VM::EC2::BlockDevice::Attachment - Object describing the attachment of an EBS volume to an instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $volume = $ec2->describe_volumes(-volume_id=>'vol-12345'); + $attachment = $ec2->attachment; + + $volId = $attachment->volumeId; + $device = $attachment->device; + $instanceId = $attachment->instanceId; + $status = $attachment->status; + $time = $attachment->attachTime; + $delete = $attachment->deleteOnTermination; + $attachment->deleteOnTermination(1); # change delete flag + +=head1 DESCRIPTION + +This object is used to describe the attachment of an Amazon EBS volume +to an instance. It is returned by VM::EC2::Volume->attachment(). + +=head1 METHODS + +The following object methods are supported: + + volumeId -- ID of the volume. + instanceId -- ID of the instance + status -- Attachment state, one of "attaching", "attached", + "detaching", "detached". + attachTime -- Timestamp for when volume was attached + deleteOnTermination -- True if the EBS volume will be deleted when its + attached instance terminates. Note that this is a + Perl true, and not the string "true". + +The deleteOnTermination method is slightly more sophisticated than +the result from the standard AWS API because it returns the CURRENT +deleteOnTermination flag for the attachment, which might have been +changed by VM::EC2->modify_instance_attributes(). You may also change +the deleteOnTermination state by passing a boolean argument to the +method: + + $attachment->deleteOnTermination(1); + +In addition, this class provides several convenience functions: + +=head2 $instance = $attachment->instance + +Returns the VM::EC2::Instance corresponding to this attachment. + +=head2 $volume = $attachment->volume + +Returns the VM::EC2::Volume object corresponding to this +attachment. + +=head2 $device = $attachment->deviceName + +Alias for device() to be compatible with VM::EC2::BlockDevice::Mapping call. + +=head2 $result = $attachment->deleteOnTermination($boolean) + +Change the deleteOnTermination flag on this attachment. + +=head2 $status = $attachment->current_status + +Refreshes the information in the object and returns status(). + +=head2 $attachment->refresh + +Calls AWS to refresh the attachment information. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate into a +string of the format "volumeId=>instanceId". + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub valid_fields { + my $self = shift; + return qw(volumeId instanceId device status attachTime deleteOnTermination); +} + +sub primary_id { + my $self = shift; + return join ('=>',$self->volumeId,$self->instanceId); +} + +sub current_status { + my $self = shift; + my $v = $self->aws->describe_volumes($self->volumeId) or return; + my $a = $v->attachment or return 'detached'; + return $a->status; +} + +sub refresh { + my $self = shift; + my $v = $self->aws->describe_volumes($self->volumeId); + my $a = $v->attachment; + %$self = %$a; +} + +sub deviceName { shift->device } + +sub deleteOnTermination { + my $self = shift; + + if (@_) { + my $deleteOnTermination = shift; + $deleteOnTermination ||= 0; + my $flag = $self->device.'='.$self->volumeId.":$deleteOnTermination"; + return $self->aws->modify_instance_attribute($self->instanceId,-block_devices=>$flag); + } + + my $device = $self->device; + my $instance = $self->instance or die $self->aws->error_str; + my @mapping = $instance->blockDeviceMapping; + my ($map) = grep {$_ eq $device} @mapping; + $map or die "Didn't find blockDeviceMapping corresponding to this attachment"; + return $map->deleteOnTermination; +} + +sub instance { + my $self = shift; + return $self->{instance} if exists $self->{instance}; + my @i = $self->aws->describe_instances(-instance_id => $self->instanceId); + @i == 1 or die "describe_instances(-instance_id=>",$self->instanceId,") returned more than one volume"; + return $self->{instance} = $i[0]; +} + +sub volume { + my $self = shift; + return $self->{volume} if exists $self->{volume}; + my @i = $self->aws->describe_volumes(-volume_id => $self->volumeId); + @i == 1 or die "describe_volumes(-volume_id=>",$self->volumeId,") returned more than one volume"; + return $self->{volume} = $i[0]; +} + + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/BlockDevice/EBS.pm b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/EBS.pm new file mode 100644 index 0000000..f1e729f --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/EBS.pm @@ -0,0 +1,87 @@ +package VM::EC2::BlockDevice::EBS; + +=head1 NAME + +VM::EC2::BlockDevice::EBS - Object describing how to initialize an Amazon EBS volume from an image + +=head1 SYNOPSIS + + use VM::EC2; + + $image = $ec2->describe_images(-image_id=>'ami-123456'); + my @devices = $image->blockDeviceMapping; + for my $d (@devices) { + my $ebs = $d->ebs; + my $snapshot_id = $ebs->snapshotId; + my $size = $ebs->volumeSize; + my $delete = $ebs->deleteOnTermination; + } + +=head1 DESCRIPTION + +This object is used to describe the parameters used to create an +Amazon EBS volume when running an image. Generally you will not call +this directly, as all its methods are passed through by the +VM::EC2::BlockDevice object returned from the +blockDeviceMapping() call. + +See L for a simpler way to get the +information needed. + +It is easy to confuse this with +VM::EC2::BlockDevice::Mapping::EBS, which describes the +attachment of an existing EBS volume to an instance. This class is +instead used to store the parameters that will be used to generate a +new EBS volume when an image is launched. + +=head1 METHODS + +The following object methods are supported: + + snapshotId -- ID of the snapshot used to create this EBS when an + instance is launched from this image. + volumeSize -- Size of the EBS volume (in gigs). + deleteOnTermination -- Whether this EBS will be deleted when the + instance terminates. Note that this will return + perl 0/1 values rather than the strings "false"/"true" + +=head1 STRING OVERLOADING + +NONE. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub valid_fields { + my $self = shift; + return qw(snapshotId volumeSize deleteOnTermination); +} + +sub deleteOnTermination { + my $self = shift; + my $dot = $self->SUPER::deleteOnTermination; + return $dot eq 'true'; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping.pm b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping.pm new file mode 100644 index 0000000..fd7b280 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping.pm @@ -0,0 +1,136 @@ +package VM::EC2::BlockDevice::Mapping; + +=head1 NAME + +VM::EC2::BlockDevice::Mapping - Object describing an EC2 block device attached to an instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instances(-instance_id=>'i-123456'); + my @devices = $instance->blockDeviceMapping; + for my $dev (@devices) { + $dev = $dev->deviceName; + $volume_id = $dev->volumeId; + $status = $dev->status; + $atime = $dev->attachmentTime; + $delete = $dev->deleteOnTermination; + $volume = $dev->volume; + } + +=head1 DESCRIPTION + +This object represents an Amazon block device associated with an instance; +it is returned by Instance->blockDeviceMapping(). + +Please see L for methods shared by all VM::EC2 +objects. + +=head1 METHODS + +These object methods are supported: + + deviceName -- Name of the device, such as /dev/sda1. + instance -- Instance object associated with this volume. + ebs -- A VM::EC2::BlockDevice::Mapping::EBS object + describing the characteristics of the attached + EBS volume + +For your convenience, a number of the ebs() object's methods are +passed through: + + volumeId -- ID of the volume. + status -- One of "attaching", "attached", "detaching", "detached" + attachTime -- Time this volume was attached + deleteOnTermination -- Whether the volume will be deleted when its attached + instance is deleted. Note that this will return perl true/false + vales, rather than the strings "true" "false". + +The deleteOnTermination() method can be used to retrieve or modify this flag: + + # get current deleteOnTermination flag + my $current_flag = $dev->deleteOnTermination; + + # if flag is true, then set it to false + if ($current_flag) { $dev->deleteOnTermination(0) } + +In addition, the following convenience function is provided: + +=head2 $volume = $dev->volume + +This returns a VM::EC2::Volume object from which more +information about the volume, such as its size, can be derived. + +=head1 STRING OVERLOADING + +When used in a string context, this object will be interpolated as the +deviceName. + +=head1 SEE ALSO + +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::BlockDevice::Mapping::EBS; + +use overload '""' => sub {shift()->deviceName}, + fallback => 1; + +sub valid_fields { + my $self = shift; + return qw(deviceName ebs); +} + +sub ebs { + my $self = shift; + return $self->{ebs} ||= VM::EC2::BlockDevice::Mapping::EBS->new($self->SUPER::ebs,$self->aws); +} + +sub instance { + my $self = shift; + my $d = $self->{instance}; + $self->{instance} = shift if @_; + return $d; +} +sub volumeId { shift->ebs->volumeId } +sub status { shift->ebs->status } +sub attachTime { shift->ebs->attachTime } +sub volume { shift->ebs->volume } + +sub deleteOnTermination { + my $self = shift; + my $ebs = $self->ebs; + my $flag = $ebs->deleteOnTermination; + if (@_) { + my $deleteOnTermination = shift; + $deleteOnTermination ||= 0; + my $flag = $self->deviceName.'='.$self->volumeId.":$deleteOnTermination"; + return $self->aws->modify_instance_attribute($self->instance,-block_devices=>$flag); + } + return $flag; +} + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping/EBS.pm b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping/EBS.pm new file mode 100644 index 0000000..b290e11 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/BlockDevice/Mapping/EBS.pm @@ -0,0 +1,114 @@ +package VM::EC2::BlockDevice::Mapping::EBS; + +=head1 NAME + +VM::EC2::BlockDevice::Mapping::EBS - Object describing an EBS volume that has been mapped onto an Amazon EC2 instance + +=head1 SYNOPSIS + + use VM::EC2; + + my $instance = $ec2->describe_instances(-instance_id=>'i-123456'); + my @devices = $instance->blockDeviceMapping; + for my $d (@devices) { + my $ebs = $d->ebs; + $volume_id = $ebs->volumeId; + $status = $ebs->status; + $atime = $ebs->attachmentTime; + $delete = $ebs->delete; + $volume = $ebs->volume; + } + +=head1 DESCRIPTION + +This object is used to describe an Amazon EBS volume that is mapped +onto an EC2 block device. It is returned by +VM::EC2->describe_instances(). + +It is easy to confuse this with VM::EC2::BlockDevice::EBS, which +describes the parameters needed to create the EBS volume when an image +is launched. This class is instead used to describe an active mapping +between an instance's block device and the underlying EBS volume. + +Because all the methods in this class are passed through to +VM::EC2::BlockDeviceMapping, it is somewhat simpler to call +them directly on the BlockDeviceMapping object: + + my $instance = $ec2->describe_instances(-instance_id=>'i-123456'); + my @devices = $instance->blockDeviceMapping; + for my $d (@devices) { + $volume_id = $d->volumeId; + $status = $d->status; + $atime = $d->attachmentTime; + $delete = $d->delete; + $volume = $d->volume; + } + +=head1 METHODS + +The following object methods are supported: + + volumeId -- ID of the volume. + status -- One of "attaching", "attached", "detaching", "detached" + attachTime -- Time this volume was attached + deleteOnTermination -- Whether the volume will be deleted when its attached + instance is deleted. Note that this returns the perl + 0/1 booleans rather than "false"/"true" strings. + +In addition, the following convenience method is supported: + +=head2 $vol = $ebs->volume + +This returns the VM::EC2::Volume object that corresponds to this +EBS. The volume will provide additional information, such as +availabilit zone. + +=head1 STRING OVERLOADING + +NONE + +=head1 SEE ALSO + +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub valid_fields { + my $self = shift; + return qw(volumeId status attachTime deleteOnTermination); +} + +sub volume { + my $self = shift; + return $self->{volume} if exists $self->{volume}; + my @vols = $self->aws->describe_volumes(-volume_id=>$self->volumeId) or return; + @vols == 1 or die "describe_volumes(-volume_id=>",$self->volumeId,") returned more than one volume"; + return $self->{volume} = $vols[0]; +} + +sub deleteOnTermination { + my $self = shift; + my $dot = $self->SUPER::deleteOnTermination; + return $dot eq 'true'; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Dispatch.pm b/perl/share/perl/5.10.1/VM/EC2/Dispatch.pm new file mode 100644 index 0000000..568eee1 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Dispatch.pm @@ -0,0 +1,450 @@ +package VM::EC2::Dispatch; + +use strict; + +use XML::Simple; +use URI::Escape; + +=head1 NAME + +VM::EC2::Dispatch - Create Perl objects from AWS XML requests + +=head1 SYNOPSIS + + use VM::EC2; + + VM::EC2::Dispatch->add_override('DescribeRegions'=>\&mysub); + + VM::EC2::Dispatch->add_override('DescribeTags'=>'My::Type'); + + sub mysub { + my ($parsed_xml_object,$ec2) = @_; + my $payload = $parsed_xml_object->{regionInfo} + return My::Type->new($payload,$ec2); + } + +=head1 DESCRIPTION + +This class handles turning the XML response to AWS requests into perl +objects. Only one method is likely to be useful to developers, the +add_override() class method. This allows you to replace the handlers +used to map the response onto objects. + +=head2 VM::EC2::Dispatch->add_override($request_name => \&sub) + +=head2 VM::EC2::Dispatch->add_override($request_name => 'Class::Name') + +=head2 VM::EC2::Dispatch->add_override($request_name => 'method_name,arg1,arg2,...') + +Before invoking a VM::EC2 request you wish to customize, call the +add_override() method with two arguments. The first argument is the +name of the request you wish to customize, such as +"DescribeVolumes". The second argument is either a code reference, a +VM::EC2::Dispatch method name and arguments (separated by commas), or +a class name. + +In the case of a code reference as the second argument, the subroutine +you provide will be invoked with four arguments consisting of the +parsed XML response, the VM::EC2 object, the XML namespace string from +the request, and the Amazon-assigned request ID. In practice, only the +first two arguments are useful. + +In the case of a string containing a classname, the class will be +loaded if it needs to be, and then its new() method invoked as +follows: + + Your::Class->new($parsed_xml,$ec2,$xmlns,$requestid) + +Your new() method should return one or more objects. It is suggested +that you subclass VM::EC2::Generic and use the inherited new() method +to store the parsed XML and EC2 object. See the code for +L for a simple template. + +If the second argument is neither a code reference nor a classname, it +will be treated as a VM::EC2::Dispatch method name and its arguments, +separated by commas. The method will be invoked as follows: + + $dispatch->$method_name($raw_xml,$ec2,$arg1,$arg2,$arg3,...) + +There are two methods currently defined for this purpose, boolean(), +and fetch_items(), which handle the preprocessing of several common +XML representations of EC2 data. Note that in this form, the RAW XML +is passed in, not the parsed data structure. + +The parsed XML response is generated by the XML::Simple module using +these options: + + $parser = XML::Simple->new(ForceArray => ['item'], + KeyAttr => ['key'], + SuppressEmpty => undef); + $parsed = $parser->XMLin($raw_xml) + +In general, this will give you a hash of hashes. Any tag named 'item' +will be forced to point to an array reference, and any tag named "key" +will be flattened as described in the XML::Simple documentation. + +A simple way to examine the raw parsed XML is to invoke any +VM::EC2::Object's as_string method: + + my ($i) = $ec2->describe_instances; + print $i->as_string; + +This will give you a Data::Dumper representation of the XML after it +has been parsed. + +Look at the data structure "ObjectRegistration" in the source code for +this module to see many examples of response to object mapping. + +=head1 OBJECT CREATION METHODS + +The following methods perform simple pre-processing of the parsed XML +(a hash of hashes) before passing the modified data structure to the +designated object class. They are used as the second argument to +add_override() + +=cut + +my %OVERRIDE; + +use constant ObjectRegistration => { + Error => 'VM::EC2::Error', + DescribeInstances => sub { load_module('VM::EC2::ReservationSet'); + my $r = VM::EC2::ReservationSet->new(@_) or return; + return $r->instances; + }, + RunInstances => sub { load_module('VM::EC2::Instance::Set'); + my $s = VM::EC2::Instance::Set->new(@_) or return; + return $s->instances; + }, + DescribeSnapshots => 'fetch_items,snapshotSet,VM::EC2::Snapshot', + DescribeVolumes => 'fetch_items,volumeSet,VM::EC2::Volume', + DescribeImages => 'fetch_items,imagesSet,VM::EC2::Image', + DescribeRegions => 'fetch_items,regionInfo,VM::EC2::Region', + DescribeAvailabilityZones => 'fetch_items,availabilityZoneInfo,VM::EC2::AvailabilityZone', + DescribeSecurityGroups => 'fetch_items,securityGroupInfo,VM::EC2::SecurityGroup', + CreateSecurityGroup => 'VM::EC2::SecurityGroup', + DeleteSecurityGroup => 'VM::EC2::SecurityGroup', + AuthorizeSecurityGroupIngress => 'boolean', + AuthorizeSecurityGroupEgress => 'boolean', + RevokeSecurityGroupIngress => 'boolean', + RevokeSecurityGroupEgress => 'boolean', + DescribeTags => 'fetch_items,tagSet,VM::EC2::Tag,nokey', + CreateVolume => 'VM::EC2::Volume', + DeleteVolume => 'boolean', + AttachVolume => 'VM::EC2::BlockDevice::Attachment', + DetachVolume => 'VM::EC2::BlockDevice::Attachment', + CreateSnapshot => 'VM::EC2::Snapshot', + DeleteSnapshot => 'boolean', + ModifySnapshotAttribute => 'boolean', + ResetSnapshotAttribute => 'boolean', + ModifyInstanceAttribute => 'boolean', + ModifyImageAttribute => 'boolean', + ResetInstanceAttribute => 'boolean', + ResetImageAttribute => 'boolean', + CreateImage => sub { + my ($data,$aws) = @_; + my $image_id = $data->{imageId} or return; + sleep 2; # wait for the thing to register + return $aws->describe_images($image_id); + }, + RegisterImage => sub { + my ($data,$aws) = @_; + my $image_id = $data->{imageId} or return; + sleep 2; # wait for the thing to register + return $aws->describe_images($image_id); + }, + DeregisterImage => 'boolean', + DescribeAddresses => 'fetch_items,addressesSet,VM::EC2::ElasticAddress', + AssociateAddress => sub { + my $data = shift; + return $data->{associationId} || ($data->{return} eq 'true'); + }, + DisassociateAddress => 'boolean', + AllocateAddress => 'VM::EC2::ElasticAddress', + ReleaseAddress => 'boolean', + CreateTags => 'boolean', + DeleteTags => 'boolean', + StartInstances => 'fetch_items,instancesSet,VM::EC2::Instance::State::Change', + StopInstances => 'fetch_items,instancesSet,VM::EC2::Instance::State::Change', + TerminateInstances => 'fetch_items,instancesSet,VM::EC2::Instance::State::Change', + RebootInstances => 'boolean', + MonitorInstances => 'fetch_items,instancesSet,VM::EC2::Instance::MonitoringState', + UnmonitorInstances => 'fetch_items,instancesSet,VM::EC2::Instance::MonitoringState', + GetConsoleOutput => 'VM::EC2::Instance::ConsoleOutput', + GetPasswordData => 'VM::EC2::Instance::PasswordData', + DescribeKeyPairs => 'fetch_items,keySet,VM::EC2::KeyPair', + CreateKeyPair => 'VM::EC2::KeyPair', + ImportKeyPair => 'VM::EC2::KeyPair', + DeleteKeyPair => 'boolean', + DescribeReservedInstancesOfferings + => 'fetch_items,reservedInstancesOfferingsSet,VM::EC2::ReservedInstance::Offering', + DescribeReservedInstances => 'fetch_items,reservedInstancesSet,VM::EC2::ReservedInstance', + PurchaseReservedInstancesOffering => sub { my ($data,$ec2) = @_; + my $ri_id = $data->{reservedInstancesId} or return; + return $ec2->describe_reserved_instances($ri_id); + }, + CreateSpotDatafeedSubscription => 'fetch_one,spotDatafeedSubscription,VM::EC2::Spot::DatafeedSubscription', + DescribeSpotDatafeedSubscription => 'fetch_one,spotDatafeedSubscription,VM::EC2::Spot::DatafeedSubscription', + DeleteSpotDatafeedSubscription => 'boolean', + DescribeSpotPriceHistory => sub { my ($data,$ec2,$xmlns,$request_id) = @_; + if ($ec2->{spot_price_history_token} && !$data->{nextToken}) { + $ec2->{spot_price_history_stop}++; + } + $ec2->{spot_price_history_token} = $data->{nextToken}; + my $items = $data->{spotPriceHistorySet}{item} or return; + load_module('VM::EC2::Spot::PriceHistory'); + return map {VM::EC2::Spot::PriceHistory->new($_,$ec2,$xmlns,$request_id)} + @$items; + }, + RequestSpotInstances => 'fetch_items,spotInstanceRequestSet,VM::EC2::Spot::InstanceRequest', + CancelSpotInstanceRequests => 'fetch_items,spotInstanceRequestSet,VM::EC2::Spot::InstanceRequest', + DescribeSpotInstanceRequests => 'fetch_items,spotInstanceRequestSet,VM::EC2::Spot::InstanceRequest', +}; + +sub new { + my $self = shift; + return bless {},ref $self || $self; +} + +sub add_override { + my $self = shift; + my ($request_name,$object_creator) = @_; + $OVERRIDE{$request_name} = $object_creator; +} + +sub response2objects { + my $self = shift; + my ($response,$ec2) = @_; + + my $handler = $self->class_from_response($response) or return; + my $content = $response->decoded_content; + + my ($method,@params) = split /,/,$handler; + + if (ref $handler eq 'CODE') { + my $parsed = $self->new_xml_parser->XMLin($content); + $handler->($parsed,$ec2,@{$parsed}{'xmlns','requestId'}); + } + elsif ($self->can($method)) { + return $self->$method($content,$ec2,@params); + } + else { + load_module($handler); + my $parser = $self->new(); + $parser->parse($content,$ec2,$handler); + } +} + +sub class_from_response { + my $self = shift; + my $response = shift; + my ($action) = $response->request->content =~ /Action=([^&]+)/; + $action = uri_unescape($action); + return $OVERRIDE{$action} || ObjectRegistration->{$action} || 'VM::EC2::Generic'; +} + +sub parser { + my $self = shift; + return $self->{xml_parser} ||= $self->new_xml_parser; +} + +sub parse { + my $self = shift; + my ($content,$ec2,$class) = @_; + $self = $self->new unless ref $self; + my $parsed = $self->parser->XMLin($content); + return $self->create_objects($parsed,$ec2,$class); +} + +sub new_xml_parser { + my $self = shift; + my $nokey = shift; + return XML::Simple->new(ForceArray => ['item'], + KeyAttr => $nokey ? [] : ['key'], + SuppressEmpty => undef, + ); +} + +=head2 $bool = $dispatch->boolean($raw_xml,$ec2,$tag) + +This is used for XML responses like this: + + + 59dbff89-35bd-4eac-99ed-be587EXAMPLE + true + + +It looks inside the structure for the tag named $tag ("return" if not +provided), and returns a true value if the contents equals "true". + +Pass it to add_override() like this: + + VM::EC2::Dispatch->add_override(DeleteVolume => 'boolean,return'; + +or, since "return" is the default tag: + + VM::EC2::Dispatch->add_override(DeleteVolume => 'boolean'; + +=cut + +sub boolean { + my $self = shift; + my ($content,$ec2,$tag) = @_; + my $parsed = $self->new_xml_parser()->XMLin($content); + $tag ||= 'return'; + return $parsed->{$tag} eq 'true'; +} + +sub fetch_one { + my $self = shift; + my ($content,$ec2,$tag,$class,$nokey) = @_; + load_module($class); + my $parser = $self->new_xml_parser($nokey); + my $parsed = $parser->XMLin($content); + my $obj = $parsed->{$tag} or return; + return $class->new($obj,$ec2,@{$parsed}{'xmlns','requestId'}); +} + +=head2 @objects = $dispatch->fetch_items($raw_xml,$ec2,$container_tag,$object_class,$nokey) + +This is used for XML responses like this: + + + 59dbff89-35bd-4eac-99ed-be587EXAMPLE + + + gsg-keypair + + 1f:51:ae:28:bf:89:e9:d8:1f:25:5d:37:2d:7d:b8:ca:9f:f5:f1:6f + + + + default-keypair + + 0a:93:bb:e8:c2:89:e9:d8:1f:42:5d:37:1d:8d:b8:0a:88:f1:f1:1a + + + + + +It looks inside the structure for the tag named $container_tag, pulls +out the items that are stored under and then passes the parsed +contents to $object_class->new(). The optional $nokey argument is used +to suppress XML::Simple's default flattening behavior turning tags +named "key" into hash keys. + +Pass it to add_override() like this: + + VM::EC2::Dispatch->add_override(DescribeVolumes => 'fetch_items,volumeSet,VM::EC2::Volume') + +=cut + +sub fetch_items { + my $self = shift; + my ($content,$ec2,$tag,$class,$nokey) = @_; + load_module($class); + my $parser = $self->new_xml_parser($nokey); + my $parsed = $parser->XMLin($content); + my $list = $parsed->{$tag}{item} or return; + return map {$class->new($_,$ec2,@{$parsed}{'xmlns','requestId'})} @$list; +} + +sub create_objects { + my $self = shift; + my ($parsed,$ec2,$class) = @_; + return $class->new($parsed,$ec2,@{$parsed}{'xmlns','requestId'}); +} + +sub create_error_object { + my $self = shift; + my ($content,$ec2) = @_; + my $class = ObjectRegistration->{Error}; + eval "require $class; 1" || die $@ unless $class->can('new'); + my $parsed = $self->new_xml_parser->XMLin($content); + return $class->new($parsed->{Errors}{Error},$ec2,@{$parsed}{'xmlns','requestId'}); +} + +# not a method! +sub load_module { + my $class = shift; + eval "require $class; 1" || die $@ unless $class->can('new'); +} + +=head1 EXAMPLE OF USING OVERRIDE TO SUBCLASS VM::EC2::Volume + +The author decided that a volume object should not be able to delete +itself, you disagree with that decision. Let's subclass +VM::EC2::Volume to add a delete() method. + +First subclass the VM::EC2::Volume class: + + package MyVolume; + use base 'VM::EC2::Volume'; + + sub delete { + my $self = shift; + $self->ec2->delete_volume($self); + } + +Now subclass VM::EC2 to add the appropriate overrides to the new() method: + + package MyEC2; + use base 'VM::EC2'; + + sub new { + my $class = shift; + VM::EC2::Dispatch->add_override(CreateVolume =>'MyVolume'); + VM::EC2::Dispatch->add_override(DescribeVolumes=>'fetch_items,volumeSet,MyVolume'); + return $class->SUPER::new(@_); + } + +Now we can test it out: + + use MyEC2; + # find all volumes that are "available" and not in-use + my @vol = $ec2->describe_volumes({status=>'available'}); + for my $vol (@vol) { $vol->delete && print "$vol deleted\n" } + + +=head1 SEE ALSO + +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/ElasticAddress.pm b/perl/share/perl/5.10.1/VM/EC2/ElasticAddress.pm new file mode 100644 index 0000000..91b723c --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/ElasticAddress.pm @@ -0,0 +1,110 @@ +package VM::EC2::ElasticAddress; + +=head1 NAME + +VM::EC2::ElasticAddress - Object describing an Amazon EC2 Elastic Address + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $addr = $ec2->allocate_address; + + $ip = $addr->publicIp; + $domain = $addr->domain; + $allId = $addr->allocationId; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 elastic address and is returned by +by VM::EC2->allocate_address(). + +=head1 METHODS + +These object methods are supported: + + publicIp -- Public IP of the address + domain -- Type of address, either "standard" or "vpc" + allocationId -- For VPC addresses only, an allocation ID + instanceId -- If the address is associated with an instance, the + ID of that instance. + associationId -- If the address is a VPC elastic IP, and associated + with an instance, then the ID of the association. + +In addition, the following convenience methods are provided: + +=head2 $result = $addr->associate($instance_id) + +Associate this address with the given instance ID or +VM::EC2::Instance object. If successful, the result code will be +true for an ordinary EC2 Elastic IP,or equal to the associationId for +a VPC Elastic IP address. + +=head2 $result = $addr->disassociate() + +Disassociate this address with any instance it is already associated +with. If successful, this method will return true. + +=head2 $addr->refresh() + +This is an internal function called after associate() and +disassociate(), and is used to refresh the address object's contents. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +publicIp. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {shift->publicIp} + +sub valid_fields { + my $self = shift; + return qw(publicIp domain allocationId instanceId associationId); +} + +sub associate { + my $self = shift; + my $instance = shift or die "Usage: \$elastic_addr->associate(\$instance)"; + my $result = $self->aws->associate_address($self,$instance); + $self->refresh if $result; + $result; +} + +sub disassociate { + my $self = shift; + my $result = $self->aws->disassociate_address($self); + $self->refresh if $result; + $result; +} + +sub refresh { + my $self = shift; + my $i = $self->aws->describe_addresses($self) or return; + %$self = %$i; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Error.pm b/perl/share/perl/5.10.1/VM/EC2/Error.pm new file mode 100644 index 0000000..43db08c --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Error.pm @@ -0,0 +1,81 @@ +package VM::EC2::Error; + +=head1 NAME + +VM::EC2::Error - Object describing an error emitted by the Amazon API + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instance(-instance_id=>'invalid-name'); + die $ec2->error if $ec2->is_error; + +=head1 DESCRIPTION + +This object represents an error emitted by the Amazon API. VM::EC2 +method calls may return undef under either of two conditions: the +request may simply have no results that satisfy it (for example, +asking to describe an instance whose ID does not exist), or an error +occurred due to invalid parameters or communication problems. + +As described in L, the VM::EC2->is_error method returns true if +the last method call resulted in an error, and VM::EC2->error returns +the content of the error message. + +=head1 METHODS + +These object methods are supported: + + message -- the error message + code -- the error code + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the code +and message into a single string in the format "Message [Code]". + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +use overload + '""' => sub { + my $self = shift; + my $msg = $self->Message; + $msg =~ s/\.$//; + my $code = $self->Code; + return "[$code] $msg";}, + fallback => 1; + +sub valid_fields { + my $self = shift; + return qw(Code Message); +} + +# because the darn Error XML doesn't adhere +# to the conventions elsewhere, in which +# the initial letter of the tag is lowercase +sub code {shift->payload->{Code}} +sub message {shift->payload->{Message}} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Generic.pm b/perl/share/perl/5.10.1/VM/EC2/Generic.pm new file mode 100644 index 0000000..4bd7080 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Generic.pm @@ -0,0 +1,462 @@ +package VM::EC2::Generic; + +=head1 NAME + +VM::EC2::Generic - Base class for VM::EC2 objects + +=head1 SYNOPSIS + + use VM::EC2; + + my $ec2 = VM::EC2->new(-access_key => 'access key id', + -secret_key => 'aws_secret_key', + -endpoint => 'http://ec2.amazonaws.com'); + + my $object = $ec2->some_method(...); + + # getting data fields + my @field_names = $object->fields; + + # invoking data fields as methods + my $request_id = $object->requestId; + my $xmlns = $object->xmlns; + + # tagging + my $tags = $object->tags; + + if ($tags->{Role} eq 'WebServer') { + $object->delete_tags(Role=>undef); + $object->add_tags(Role => 'Web Server', + Status => 'development'); + } + + # get the parsed XML object as a hash + my $hashref = $object->payload; + + # get the parsed XML object as a Data::Dumper string + my $text = $object->as_string; + + # get the VM::EC2 object back + my $ec2 = $object->ec2; + + # get the most recent error string + warn $object->error_str; + +=head1 DESCRIPTION + +This is a common base class for objects returned from VM::EC2. It +provides a number of generic methods that are used in subclasses, but +is not intended to be used directly. + +=head1 METHODS + +=cut + +use strict; +use Carp 'croak'; +use Data::Dumper; + +our $AUTOLOAD; +$Data::Dumper::Terse++; +$Data::Dumper::Indent=1; + +use overload + '""' => sub {my $self = shift; + return $self->short_name; + }, + fallback => 1; + +sub AUTOLOAD { + my $self = shift; + my ($pack,$func_name) = $AUTOLOAD=~/(.+)::([^:]+)$/; + return if $func_name eq 'DESTROY'; + my %fields = map {$_=>1} $self->valid_fields; + my $mixed = VM::EC2->uncanonicalize($func_name);# mixedCase + my $flat = VM::EC2->canonicalize($func_name); # underscore_style + $flat =~ s/^-//; + + if ($mixed eq $flat) { + return $self->{data}{$mixed} if $fields{$mixed}; + croak "Can't locate object method \"$func_name\" via package \"$pack\""; + } + + if ($func_name eq $flat && $self->can($mixed)) { + return $self->$mixed(@_); + } elsif ($func_name eq $mixed && $self->can($flat)) { + return $self->$flat(@_); + } elsif ($fields{$mixed}) { + return $self->{data}{$mixed} if $fields{$mixed}; + } else { + croak "Can't locate object method \"$func_name\" via package \"$pack\""; + } +} + +sub can { + my $self = shift; + my $method = shift; + + my $can = $self->SUPER::can($method); + return $can if $can; + + my %fields = map {$_=>1} $self->valid_fields; + return \&AUTOLOAD if $fields{$method}; + + return; +} + +=head2 $object = VM::EC2::Generic->new($payload,$ec2 [,$xmlns, $requestId]) + +Given the parsed XML generated by VM::EC2::Dispatch and the VM::EC2 +object, return a new object. Two optional additional arguments provide +the seldom-needed XML namespace and ID of the request that generated +this object. + +=cut + +sub new { + my $self = shift; + @_ >= 2 or croak "Usage: $self->new(\$data,\$ec2)"; + my ($data,$ec2,$xmlns,$requestid) = @_; + return bless {data => $data, + aws => $ec2, + xmlns => $xmlns, + requestId => $requestid + },ref $self || $self; +} + +=head2 $ec2 = $object->ec2 + +=head2 $ec2 = $object->aws + +Return the VM::EC2 object that generated this object. This method can +be called as either ec2() (preferred) or aws() (deprecated). + +=cut + +sub ec2 { + my $self = shift; + my $d = $self->{aws}; + $self->{aws} = shift if @_; + $d; +} + +sub aws {shift->ec2} + +=head2 $id = $object->primary_id (optional method) + +Resources that have unique Amazon identifiers, such as images, +instances and volumes, implement the primary_id() method to return +that identifier. Resources that do not have unique identifiers, will +throw an exception if this method is called. This method is in +addition to the resource-specific ID. For example, volumes have a +unique ID, and this ID can be fetched with either of: + + $vol->volumeId; + +or + + $vol->primary_id; + +=back + +=head2 $xmlns = $object->xmlns + +Return the XML namespace of the request that generated this object, if +any. All objects generated by direct requests on the VM::EC2 object +will return this field, but objects returned via methods calls on +these objects (objects once removed) may not. + +=cut + +sub xmlns { shift->{xmlns} } + +=head2 $id = $object->requestId + +Return the ID of the reuqest that generated this object, if any. All +objects generated by direct requests on the VM::EC2 object will return +this field, but objects returned via methods calls on these objects +(objects once removed) may not. + +=cut + +sub requestId { shift->{requestId} } + +=head2 $name = $object->short_name + +Return a short name for this object for use in string +interpolation. If the object has a primary_id() method, then this +returns that ID. Otherwise it returns the default Perl object name +(VM::EC2::Generic=HASH(0x99f3850). Some classes override short_name() +in order to customized information about the object. See for example +L. + +=cut + +sub short_name { + my $self = shift; + if ($self->can('primary_id')) { + return $self->primary_id; + } else { + return overload::StrVal($self); + } +} + +=head2 $hashref = $object->payload + +Return the parsed XML hashref that underlies this object. See +L. + +=cut + +sub payload { shift->{data} } + + +=head2 @fields = $object->fields + +Return the data field names that are valid for an object of this +type. These field names correspond to tags in the XML +returned from Amazon and can then be used as method calls. + +Internally, this method is called valid_fields() + +=cut + +sub fields { shift->valid_fields } + +sub valid_fields { + return qw(xmlns requestId) +} + +=head2 $text = $object->as_string + +Return a Data::Dumper representation of the contents of this object's +payload. + +=cut + +sub as_string { + my $self = shift; + return Dumper($self->{data}); +} + +=head2 $hashref = $object->tags +=head2 $hashref = $object->tagSet + +Return the metadata tags assigned to this resource, if any, as a +hashref. Both tags() and tagSet() work identically. + +=cut + +sub tags { + my $self = shift; + my $result = {}; + my $set = $self->{data}{tagSet} or return $result; + my $innerhash = $set->{item} or return $result; + for my $key (keys %$innerhash) { + $result->{$key} = $innerhash->{$key}{value}; + } + return $result; +} + +sub tagSet { + return shift->tags(); +} + + +=head2 $boolean = $object->add_tags(Tag1=>'value1',Tag2=>'value2',...) + +=head2 $boolean = $object->add_tags(\%hash) + +Add one or more tags to the object. You may provide either a list of +tag/value pairs or a hashref. If no tag of the indicated name exsists +it will be created. If there is already a tag by this name, it will +be set to the provided value. The result code is true if the Amazon +resource was successfully updated. + +Also see VM::EC2->add_tags() for a way of tagging multiple resources +simultaneously. + +The alias add_tag() is also provided as a convenience. + +=cut + +sub add_tags { + my $self = shift; + my $taglist = ref $_[0] && ref $_[0] eq 'HASH' ? shift : {@_}; + $self->can('primary_id') or croak "You cannot tag objects of type ",ref $self; + $self->aws->create_tags(-resource_id => $self->primary_id, + -tag => $taglist); +} + +sub add_tag { shift->add_tags(@_) } + +=head2 $boolean = $object->delete_tags(@args) + +Delete the indicated tags from the indicated resource. There are +several variants you may use: + + # delete Foo tag if it has value "bar" and Buzz tag if it has value 'bazz' + $i->delete_tags({Foo=>'bar',Buzz=>'bazz'}) + + # same as above but using a list rather than a hashref + $i->delete_tags(Foo=>'bar',Buzz=>'bazz') + + # delete Foo tag if it has any value, Buzz if it has value 'bazz' + $i->delete_tags({Foo=>undef,Buzz=>'bazz'}) + + # delete Foo and Buzz tags unconditionally + $i->delete_tags(['Foo','Buzz']) + + # delete Foo tag unconditionally + $i->delete_tags('Foo'); + +Also see VM::EC2->delete_tags() for a way of deleting tags from multiple +resources simultaneously. + +=cut + +sub delete_tags { + my $self = shift; + my $taglist; + + if (ref $_[0]) { + if (ref $_[0] eq 'HASH') { + $taglist = shift; + } elsif (ref $_[0] eq 'ARRAY') { + $taglist = {map {$_=>undef} @{$_[0]} }; + } + } else { + if (@_ == 1) { + $taglist = {shift()=>undef}; + } else { + $taglist = {@_}; + } + } + + $self->can('primary_id') or croak "You cannot delete tags from objects of type ",ref $self; + $self->aws->delete_tags(-resource_id => $self->primary_id, + -tag => $taglist); +} + +sub _object_args { + my $self = shift; + return ($self->aws,$self->xmlns,$self->requestId); +} + +=head2 $xml = $object->as_xml + +Returns an XML version of the object. The object will already been +parsed by XML::Simple at this point, and so the data returned by this +method will not be identical to the XML returned by AWS. + +=cut + +sub as_xml { + my $self = shift; + XML::Simple->new->XMLout($self->payload, + NoAttr => 1, + KeyAttr => ['key'], + RootName => 'xml', + ); +} + +=head2 $value = $object->attribute('tag_name') + +Returns the value of a tag in the XML returned from AWS, using a +simple heuristic. If the requested tag has a nested tag named +it will return the contents of . If the tag has one or more +nested tags named , it will return a list of hashrefs located +within the tag. Otherwise it will return the contents of +. + +=cut + +sub attribute { + my $self = shift; + my $attr = shift; + my $payload = $self->payload or return; + my $hr = $payload->{$attr} or return; + return $hr->{value} if $hr->{value}; + return @{$hr->{item}} if $hr->{item}; + return $hr; +} + +=head2 $string = $object->error_str + +Returns the error string for the last operation, if any, as reported +by VM::EC2. + +=cut + +sub error_str { + my $self = shift; + my $ec2 = $self->ec2 or return; + $ec2->error_str; +} + +=head2 $string = $object->error + +Returns the L object from the last operation, if any, +as reported by VM::EC2. + +=cut + +sub error { + my $self = shift; + my $ec2 = $self->ec2 or return; + $ec2->error; +} + +=head1 STRING OVERLOADING + +This base class and its subclasses use string overloading so that the +object looks and acts like a simple string when used in a string +context (such as when printed or combined with other +strings). Typically the string corresponds to the Amazon resource ID +such as "ami-12345" and is generated by the short_name() method. + +You can sort and compare the objects as if they were strings, but +despite this, object method calls work in the usual way. + +=head1 SEE ALSO + +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/Group.pm b/perl/share/perl/5.10.1/VM/EC2/Group.pm new file mode 100644 index 0000000..5a50926 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Group.pm @@ -0,0 +1,92 @@ +package VM::EC2::Group; + +=head1 NAME + +VM::EC2::Group - Object describing an Amazon EC2 security group name + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instances(-instance_id=>'i-12345'); + my @groups = $instance->groups; + for my $g (@groups) { + my $id = $g->groupId; + my $name = $g->groupName; + + # get the security group details + my $sg = $ec2->describe_security_group($g); + my $permissions = $sg->ipPermissions; + } + +=head1 DESCRIPTION + +This object represents the name and ID of a security group. It is +returned by an instance's groups() method. This object does not +provide any of the details about the security group, but you can use +it in a call to VM::EC2->describe_security_group() to get details about +the security group's allowed ports, etc. + +=head1 METHODS + +These object methods are supported: + + groupId -- the group ID + groupName -- the group's name + +For convenience, the object also provides a permissions() method that +will return the fully detailed VM::EC2::SecurityGroup: + + $details = $group->permissions() + +See L + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +groupId. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub valid_fields { + my $self = shift; + return $self->SUPER::valid_fields, + qw(groupId groupName); +} + +sub primary_id { shift->groupId } + +sub permissions { + my $self = shift; + return $self->{perm} if exists $self->{perm}; + my @sg = $self->aws->describe_security_groups(-group_id=>$self->groupId); + return unless @sg; + die "more than one security group returned?" if @sg > 1; + return $self->{perm} = $sg[0]; +} + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/Image.pm b/perl/share/perl/5.10.1/VM/EC2/Image.pm new file mode 100644 index 0000000..beae9fe --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Image.pm @@ -0,0 +1,320 @@ +package VM::EC2::Image; + +=head1 NAME + +VM::EC2::Image - Object describing an Amazon Machine Image (AMI) + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $image = $ec2->describe_images(-image_id=>'ami-12345'); + + $state = $image->imageState; + $owner = $image->imageOwnerId; + $rootdev = $image->rootDeviceName; + @devices = $image->blockDeviceMapping; + $tags = $image->tags; + + @instances = $image->run_instances(-min_count=>10); + +=head1 DESCRIPTION + +This object represents an Amazon Machine Image (AMI), and is returned +by VM::EC2->describe_images(). In addition to methods to query the +image's attributes, the run_instances() method allows you to launch +and configure EC2 instances based on the AMI. + +=head1 METHODS + +These object methods are supported: + + imageId -- AMI ID + imageLocation -- Location of the AMI + imageState -- Current state of the AMI. One of "available", + "pending" or "failed". Only "available" AMIs + can be launched. + imageOwnerId -- AWS account ID of the image owner. + isPublic -- Returns true if this image has public launch + permissions. Note that this is a Perl boolean, + and not the string "true". + productCodes -- A list of product codes associated with the image. + architecture -- The architecture of the image. + imageType -- The image type (machine, kernel or RAM disk). + kernelId -- The kernel associated with the image. + ramdiskId -- The RAM disk associated with the image. + platform -- "Windows" for Windows AMIs, otherwise undef. + stateReason -- Explanation of a "failed" imageState. This is + a VM::EC2::Instance::State::Reason + object. + imageOwnerAlias -The AWS account alias (e.g. "self") or AWS + account ID that owns the AMI. + name -- Name of the AMI provided during image creation. + description -- Description of the AMI provided during image + creation. + rootDeviceType -- The root device type. One of "ebs" or + "instance-store". + rootDeviceMape -- Name of the root device, e.g. "/dev/sda1" + blockDeviceMapping -- List of block devices attached to this + image. Each element is a + VM::EC2::BlockDevice. + virtualizationType -- One of "paravirtual" or "hvm". + hypervisor -- One of "ovm" or "xen" + +In addition, the object supports the tags() method described in +L: + + print "ready for production\n" if $image->tags->{Released}; + +=head2 @instances = $image->run_instances(%args) + +The run_instance() method will launch one or more instances based on +this AMI. The method takes all the arguments recognized by +VM::EC2->run_instances(), except for the -image_id argument. The +method returns a list of VM::EC2::Instance objects, which you may +monitor periodically until they are up and running. + +All arguments are optional. See run_instances() in L for +more information. + + -min_count Minimum number of instances to launch [1] + -max_count Maximum number of instances to launch [1] + -key_name Name of the keypair to use + -security_group_id Security group ID to use for this instance. + Use an arrayref for multiple group IDs + -security_group Security group name to use for this instance. + Use an arrayref for multiple values. + -user_data User data to pass to the instances. Do NOT base64 + encode this. It will be done for you. + -instance_type Type of the instance to use. See below for a + list. + -placement_zone The availability zone you want to launch the + instance into. Call $ec2->regions for a list. + -placement_group An existing placement group to launch the + instance into. Applicable to cluster instances + only. + -placement_tenancy Specify 'dedicated' to launch the instance on a + dedicated server. Only applicable for VPC + instances. + -kernel_id ID of the kernel to use for the instances, + overriding the kernel specified in the image. + -ramdisk_id ID of the ramdisk to use for the instances, + overriding the ramdisk specified in the image. + -block_devices Specify block devices to map onto the instances, + overriding the values specified in the image. + This can be a scalar string or an arrayref for + multiple mappings: + Example: + ['/dev/sdb=ephemeral0','/dev/sdc=snap-12345:80:false'] + -monitoring Pass a true value to enable detailed monitoring. + -subnet_id ID of the subnet to launch the instance + into. Only applicable for VPC instances. + -termination_protection Pass true to lock the instance so that it + cannot be terminated using the API. Use + modify_instance() to unset this if youu wish to + terminate the instance later. + -disable_api_termination -- Same as above. + -shutdown_behavior Pass "stop" (the default) to stop the instance + and save its disk state when "shutdown" is called + from within the instance. Stopped instances can + be restarted later. Pass "terminate" to + instead terminate the instance and discard its + state completely. + -instance_initiated_shutdown_behavior -- Same as above. + -private_ip_address Assign the instance to a specific IP address + from a VPC subnet (VPC only). + -client_token Unique identifier that you can provide to ensure + idempotency of the request. You can use + $ec2->token() to generate a suitable identifier. + See http://docs.amazonwebservices.com/AWSEC2/ + latest/UserGuide/Run_Instance_Idempotency.html + +Note that after launching an instance, you may need to wait a few +seconds before adding tags to it or performing other operations. + +See L for details. + +=head2 $boolean = $image->make_public($public) + +Change the isPublic flag. Provide a true value to make the image +public, a false one to make it private. + +=head2 $state = $image->current_status + +Refreshes the object and then calls imageState() to return one of +"pending", "available" or "failed." You can use this to monitor an +image_creation process in progress. + +=head2 @user_ids = $image->launchPermissions + +Returns a list of user IDs with launch permission for this +image. Note that the AWS API calls this +"launchPermission", but this module makes it plural to emphasize that +the result is a list. + +=head2 @user_ids = $image->authorized_users + +The same as launchPermissions. + +=head2 $boolean = $image->add_authorized_users($id1,$id2,...) + +=head2 $boolean = $image->remove_authorized_users($id1,$id2,...) + +These methods add and remove user accounts which have launch +permissions for the image. The result code indicates whether the list +of user IDs were successfully added or removed. + +=head2 $boolean = $image->add_authorized_users($id1,$id2,...) + +=head2 $boolean = $image->remove_authorized_users($id1,$id2,...) + +=head2 $boolean = $image->reset_authorized_users + +These methods add and remove user accounts which have launch +permissions for the image. The result code indicates whether the list +of user IDs were successfully added or removed. + +reset_authorized_users() resets the list users authored to launch +instances from this image to empty, effectively granting launch +privileges to the owner only. + +See also authorized_users(). + + + +=head2 $image->refresh + +This method will refresh the object from AWS, updating all values to +their current ones. You can call it after tagging or otherwise +changing image attributes. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +imageId. + +=head1 SEE ALSO + +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::BlockDevice; +use VM::EC2::Image::LaunchPermission; +use VM::EC2::Instance::State::Reason; + +use Carp 'croak'; + +sub valid_fields { + my $self = shift; + return qw(imageId imageLocation imageState imageOwnerId isPublic + productCodes architecture imageType kernelId ramdiskId + platform stateReason imageOwnerAlias name description + rootDeviceType rootDeviceName blockDeviceMapping + virtualizationType tagSet hypervisor); +} + +sub primary_id { shift->imageId } + +sub stateReason { + my $self = shift; + my $state = $self->SUPER::stateReason; + return VM::EC2::Instance::State::Reason->new($state); + +} + +sub productCodes { + my $self = shift; + my $codes = $self->SUPER::productCodes or return; + return map {$_->{productCode}} @{$codes->{item}}; +} + +sub blockDeviceMapping { + my $self = shift; + my $mapping = $self->SUPER::blockDeviceMapping or return; + return map { VM::EC2::BlockDevice->new($_,$self->aws)} @{$mapping->{item}}; +} + +sub launchPermissions { + my $self = shift; + return map {VM::EC2::Image::LaunchPermission->new($_,$self->aws)} + $self->aws->describe_image_attribute($self->imageId,'launchPermission'); +} + +sub isPublic { + my $self = shift; + return $self->SUPER::isPublic eq 'true'; +} + +sub make_public { + my $self = shift; + @_ == 1 or croak "Usage: VM::EC2::Image->make_public(\$boolean)"; + my $public = shift; + my @arg = $public ? (-launch_add_group=>'all') : (-launch_remove_group=>'all'); + my $result = $self->aws->modify_image_attribute($self->imageId,@arg) or return; + $self->payload->{isPublic} = $public ? 'true' : 'false'; + return $result +} + +sub authorized_users { shift->launchPermissions } + +sub add_authorized_users { + my $self = shift; + @_ or croak "Usage: VM::EC2::Image->add_authorized_users(\@userIds)"; + return $self->aws->modify_image_attribute($self->imageId,-launch_add_user=>\@_); +} + +sub remove_authorized_users { + my $self = shift; + @_ or croak "Usage: VM::EC2::Image->remove_authorized_users(\@userIds)"; + return $self->aws->modify_image_attribute($self->imageId,-launch_remove_user=>\@_); +} + +sub reset_authorized_users { + my $self = shift; + $self->aws->reset_image_attribute($self->imageId,'launchPermission'); +} + +sub run_instances { + my $self = shift; + my %args = @_; + croak "$self is unavailable for launching because its state is ",$self->imageState + unless $self->imageState eq 'available'; + $args{-image_id} = $self->imageId; + $self->aws->run_instances(%args); +} + +sub current_status { + my $self = shift; + $self->refresh; + return $self->imageState; +} + +sub refresh { + my $self = shift; + my $i = shift; + ($i) = $self->aws->describe_images(-image_id=>$self->imageId) unless $i; + %$self = %$i; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Image/LaunchPermission.pm b/perl/share/perl/5.10.1/VM/EC2/Image/LaunchPermission.pm new file mode 100644 index 0000000..dbebce7 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Image/LaunchPermission.pm @@ -0,0 +1,67 @@ +package VM::EC2::Image::LaunchPermission; + +=head1 NAME + +VM::EC2::Region - Object describing AMI launch permissions + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $image = $ec2->describe_images('ami-12345'); + @users = $image->launchPermissions; + for (@users) { + $group = $_->group; + $user = $_->userId; + } + +=head1 DESCRIPTION + +This object represents an Amazon machine image launch permission, and +is return by VM::EC2::Image launchPermissions(). + +=head1 METHODS + +These object methods are supported: + + group -- Name of a group with launch permissions. Only + valid value is "all" + userId -- Name of a user with launch permissions. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +userId. If the userId is blank, then interpolates as the group. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {my $self = shift; $self->userId || $self->group }; + +sub valid_fields { + my $self = shift; + return qw(group userId); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance.pm b/perl/share/perl/5.10.1/VM/EC2/Instance.pm new file mode 100644 index 0000000..3840588 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance.pm @@ -0,0 +1,763 @@ +package VM::EC2::Instance; + +=head1 NAME + +VM::EC2::Instance - Object describing an Amazon EC2 instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instances(-instance_id=>'i-12345'); + + $instanceId = $instance->instanceId; + $ownerId = $instance->ownerId; + $reservationId = $instance->reservationId; + $imageId = $instance->imageId; + $state = $instance->instanceState; + @groups = $instance->groups; + $private_ip = $instance->privateIpAddress; + $public_ip = $instance->ipAddress; + $private_dns = $instance->privateDnsName; + $public_dns = $instance->dnsName; + $time = $instance->launchTime; + $status = $instance->current_status; + $tags = $instance->tags; + + $stateChange = $instance->start(); + $stateChange = $instance->stop(); + $stateChange = $instance->reboot(); + $stateChange = $instance->terminate(); + + $seconds = $instance->up_time; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 instance, and is returned by +VM::EC2->describe_instances(). In addition to methods to query the +instance's attributes, there are methods that allow you to manage the +instance's lifecycle, including start, stopping, and terminating it. + +Note that the information about security groups and reservations that +is returned by describe_instances() is copied into each instance +before returning it, so there is no concept of a "reservation set" in +this interface. + +=head1 METHODS + +These object methods are supported: + + instanceId -- ID of this instance. + + imageId -- ID of the image used to launch this instance. + + instanceState -- The current state of the instance at the time + that describe_instances() was called, as a + VM::EC2::Instance::State object. Also + see the status() method, which re-queries EC2 for + the current state of the instance. + + privateDnsName -- The private DNS name assigned to the instance within + Amazon's EC2 network. This element is defined only + for running instances. + + dnsName -- The public DNS name assigned to the instance, defined + only for running instances. + + reason -- Reason for the most recent state transition, + if applicable. + + keyName -- Name of the associated key pair, if applicable. + + keyPair -- The VM::EC2::KeyPair object, derived from the keyName + + amiLaunchIndex -- The AMI launch index, which can be used to find + this instance within the launch group. + + productCodes -- A list of product codes that apply to this instance. + + instanceType -- The instance type, such as "t1.micro". CHANGEABLE. + + launchTime -- The time the instance launched. + + placement -- The placement of the instance. Returns a + VM::EC2::Instance::Placement object, which when used + as a string is equal to the instance's + availability zone. + + kernelId -- ID of the instance's kernel. CHANGEABLE. + + ramdiskId -- ID of the instance's RAM disk. CHANGEABLE. + + platform -- Platform of the instance, either "windows" or empty. + + monitoring -- State of monitoring for the instance. One of + "disabled", "enabled", or "pending". CHANGEABLE: + pass true or "enabled" to turn on monitoring. Pass + false or "disabled" to turn it off. + + subnetId -- The Amazon VPC subnet ID in which the instance is + running, for Virtual Private Cloud instances only. + + vpcId -- The Virtual Private Cloud ID for VPC instances. + + privateIpAddress -- The private (internal Amazon) IP address assigned + to the instance. + + ipAddress -- The public IP address of the instance. + + sourceDestCheck -- Whether source destination checking is enabled on + this instance. This returns a Perl boolean rather than + the string "true". This method is used in conjunction + with VPC NAT functionality. See the Amazon VPC User + Guide for details. CHANGEABLE. + + groupSet -- List of VM::EC2::Group objects indicating the VPC + security groups in which this instance resides. Not to be + confused with groups(), which returns the security groups + of non-VPC instances. + + stateReason -- A VM::EC2::Instance::State::Reason object which + indicates the reason for the instance's most recent + state change. See http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/ApiReference-ItemType-StateReasonType.html + + architecture -- The architecture of the image. Either "i386" or "x86_64". + + rootDeviceType -- The type of the root device used by the instance. One of "ebs" + or "instance-store". + + rootDeviceName -- The name of the the device used by the instance, such as /dev/sda1. + CHANGEABLE. + + blockDeviceMapping -- The block device mappings for the instance, represented + as a list of L objects. + + instanceLifeCycle-- "spot" if this instance is a spot instance, otherwise empty. + + spotInstanceRequestId -- The ID of the spot instance request, if applicable. + + virtualizationType -- Either "paravirtual" or "hvm". + + clientToken -- The idempotency token provided at the time of the AMI launch, + if any. + + hypervisor -- The instance's hypervisor type, either "ovm" or "xen". + + userData -- User data passed to instance at launch. CHANGEABLE. + + disableApiTermination -- True if the instance is protected from termination + via the console or command-line APIs. CHANGEABLE. + + instanceInitiatedShutdownBehavior -- Action to take when the instance calls + shutdown or halt. One of "stop" or "terminate". CHANGEABLE. + + tagSet -- Tags for the instance as a hashref. CHANGEABLE via add_tags() + and delete_tags(). + +The object also supports the tags() method described in +L: + + print "ready for production\n" if $image->tags->{Released}; + +All methods return read-only values except for those marked CHANGEABLE +in the list above. For these, you can change the instance attribute on +stopped instances by invoking the method with an appropriate new +value. For example, to change the instance type from "t1.micro" to +"m1.small", you can do this: + + my @tiny_instances = $ec2->describe_instances(-filter=>{'instance-type'=>'t1.micro'}); + for my $i (@tiny_instances) { + next unless $i->instanceState eq 'stopped'; + $i->instanceType('m1.small') or die $ec2->error; + } + +When you attempt to change an attribute of an instance, the method +will return true on success, false on failure. On failure, the +detailed error messages can be recovered from the VM::EC2 object's +error() method. + +=head1 LIFECYCLE METHODS + +In addition, the following convenience functions are provided + +=head2 $state = $instance->current_status + +This method queries AWS for the instance's current state and returns +it as a VM::EC2::Instance::State object. This enables you to +poll the instance until it is in the desired state: + + while ($instance->current_status eq 'pending') { sleep 5 } + +=head2 $state = $instance->current_state + +An alias for current_status(). + +=head2 $state_change = $instance->start([$wait]) + +This method will start the current instance and returns a +VM::EC2::Instance::State::Change object that can be used to +monitor the status of the instance. By default the method returns +immediately, but you can pass a true value as an argument in order to +pause execution until the instance is in the "running" state. + +Here's a polling example: + + $state = $instance->start; + while ($state->status eq 'pending') { sleep 5 } + +Here's an example that will pause until the instance is running: + + $instance->start(1); + +Attempting to start an already running instance, or one that is +in transition, will throw a fatal error. + +=head2 $state_change = $instance->stop([$wait]) + +This method is similar to start(), except that it can be used to +stop a running instance. + +=head2 $state_change = $instance->terminate([$wait]) + +This method is similar to start(), except that it can be used to +terminate an instance. It can only be called on instances that +are either "running" or "stopped". + +=head2 $state_change = $instance->reboot() + +Reboot the instance. Rebooting doesn't occur immediately; instead the +request is queued by the Amazon system and may be satisfied several +minutes later. For this reason, there is no "wait" argument. + +=head2 $seconds = $instance->up_time() + +Return the number of seconds since the instance was launched. Note +that this includes time that the instance was either in the "running" +or "stopped" state. + +=head2 $result = $instance->associate_address($elastic_address) + +Associate an elastic address with this instance. If you are +associating a VPC elastic IP address with the instance, the result +code will indicate the associationId. Otherwise it will be a simple +perl truth value ("1") if successful, undef if false. + +In the case of an ordinary EC2 Elastic IP address, the first argument may +either be an ordinary string (xx.xx.xx.xx format) or a +VM::EC2::ElasticAddress object. However, if it is a VPC elastic +IP address, then the argument must be a VM::EC2::ElasticAddress +as returned by describe_addresses(). The reason for this is that the +allocationId must be retrieved from the object in order to use in the +call. + +=head2 $bool = $ec2->disassociate_address + +Disassociate an elastic IP address from this instance. if any. The +result will be true if disassociation was successful. Note that for a +short period of time (up to a few minutes) after disassociation, the +instance will have no public IP address and will be unreachable from +the internet. + +=head2 $instance->refresh + +This method will refresh the object from AWS, updating all values to +their current ones. You can call it after starting an instance in +order to get its IP address. Note that refresh() is called +automatically for you if you call start(), stop() or terminate() with +a true $wait argument. + +=head2 $text = $instance->console_output + +Return the console output of the instance as a +VM::EC2::ConsoleOutput object. This object can be treated as a +string, or as an object with methods + +=head1 CREATING IMAGES + +The create_image() method provides a handy way of creating and +registering an AMI based on the current state of the instance. All +currently-associated block devices will be snapshotted and associated +with the image. + +Note that this operation can take a long time to complete. You may +follow its progress by calling the returned image object's +current_status() method. + +=head2 $imageId = $instance->create_image($name [,$description]) + +=head2 $imageId = $instance->create_image(-name=>$name,-description=>$description,-no_reboot=>$boolean) + +Create an image from this instance and return a VM::EC2::Image object. +The instance must be in the "stopped" or "running" state. In the +latter case, Amazon will stop the instance, create the image, and then +restart it unless the -no_reboot argument is provided. + +Arguments: + + -name Name for the image that will be created. (required) + -description Description of the new image. + -no_reboot If true, don't reboot the instance. + +In the unnamed argument version you can provide the name and +optionally the description of the resulting image. + +=head1 VOLUME MANAGEMENT + +=head2 $attachment = $instance->attach_volume($volume_id,$device) + + =head2 $attachment = $instance->attach_volume(-volume_id=>$volume_id,-device=>$device) + +Attach volume $volume_id to this instance using virtual device +$device. Both arguments are required. The result is a +VM::EC2::BlockDevice::Attachment object which you can monitor by +calling current_status(): + + my $a = $instance->attach_volume('vol-12345'=>'/dev/sdg'); + while ($a->current_status ne 'attached') { + sleep 2; + } + print "volume is ready to go\n"; + +=head2 $attachment = $instance->detach_volume($vol_or_device) + +=head2 $attachment = $instance->detach_volume(-volume_id => $volume_id + -device => $device, + -force => $force); + +Detaches the specified volume. In the single-argument form, you may +provide either a volume or a device name. In the named-argument form, +you may provide both the volume and the device as a check that you are +detaching exactly the volume you think you are. + +Optional arguments: + + -volume_id -- ID of the instance to detach from. + -device -- How the device is exposed to the instance. + -force -- Force detachment, even if previous attempts were + unsuccessful. + +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling current_status(): + + my $a = $instance->detach_volume('/dev/sdg'); + while ($a->current_status ne 'detached') { + sleep 2; + } + print "volume is ready to go\n"; + +=head1 ACCESSING INSTANCE METADATA + +=head2 $meta = $instance->metadata + +B This method returns a +VM::EC2::Instance::Metadata object that will return information about +the currently running instance using the HTTP:// metadata fields +described at +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?instancedata-data-categories.html. This +is usually fastest way to get runtime information on the current +instance. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +instanceId. + +=head1 SEE ALSO + +L +L +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::Group; +use VM::EC2::Instance::State; +use VM::EC2::Instance::State::Reason; +use VM::EC2::BlockDevice::Mapping; +use VM::EC2::Instance::Placement; +use MIME::Base64 qw(encode_base64 decode_base64); +use Carp 'croak'; + +sub new { + my $self = shift; + my %args = @_; + return bless { + data => $args{-instance}, + reservation => $args{-reservation}, + requester => $args{-requester}, + owner => $args{-owner}, + groups => $args{-groups}, + aws => $args{-aws}, + xmlns => $args{-xmlns}, + requestId => $args{-requestId}, + },ref $self || $self; +} + +sub reservationId {shift->{reservation} } +sub requesterId {shift->{requester} } +sub ownerId {shift->{owner} } +sub groups { + my $self = shift; + my $groups = $self->{groups}; + if (@_) { + return $self->aws->modify_instance_attribute($self,-group_id=>\@_); + } else { + return @$groups; + } +} +sub group {shift()->{groups}[0] } +sub primary_id {shift()->instanceId } + +sub valid_fields { + my $self = shift; + return qw(instanceId + imageId + instanceState + privateDnsName + dnsName + reason + keyName + amiLaunchIndex + productCodes + instanceType + launchTime + placement + kernelId + ramdiskId + monitoring + privateIpAddress + ipAddress + sourceDestCheck + architecture + rootDeviceType + rootDeviceName + blockDeviceMapping + instanceLifecycle + spotInstanceRequestId + virtualizationType + clientToken + hypervisor + tagSet + ); +} + +sub keyPair { + my $self = shift; + my $name = $self->keyName or return; + return $self->aws->describe_key_pairs($name); +} + +sub instanceState { + my $self = shift; + my $state = $self->SUPER::instanceState; + return VM::EC2::Instance::State->new($state); +} + +sub sourceDestCheck { + my $self = shift; + my $check = $self->SUPER::sourceDestCheck; + if (@_) { + my $c = shift() ? 'true' : 'false'; + return $self->aws->modify_instance_attribute($self,-source_dest_check=>$c); + } + return $check eq 'true'; +} + +sub groupSet { + my $self = shift; + my $groupSet = $self->SUPER::groupSet; + return map {VM::EC2::Group->new($_,$self->aws,$self->xmlns,$self->requestId)} + @{$groupSet->{item}}; +} + +sub placement { + my $self = shift; + my $p = $self->SUPER::placement or return; + return VM::EC2::Instance::Placement->new($p,$self->aws,$self->xmlns,$self->requestId); +} + +sub monitoring { + my $self = shift; + if (@_) { + my $enable = shift; + if ($enable && $enable ne 'disabled') { + return $self->aws->monitor_instances($self); + } else { + return $self->aws->unmonitor_instances($self); + } + } + return $self->SUPER::monitoring->{state}; +} + +sub blockDeviceMapping { + my $self = shift; + $self->refresh; + my $mapping = $self->SUPER::blockDeviceMapping or return; + my @mapping = map { VM::EC2::BlockDevice::Mapping->new($_,$self->aws)} @{$mapping->{item}}; + foreach (@mapping) { $_->instance($self) } + return @mapping; +} + +sub blockDeviceMappings {shift->blockDeviceMapping} + +sub stateReason { + my $self = shift; + my $reason = $self->SUPER::stateReason; + return VM::EC2::Instance::State::Reason->new($reason,$self->_object_args); +} + +sub kernelId { + my $self = shift; + my $kernel = $self->SUPER::kernelId; + if (@_) { + return $self->aws->modify_instance_attribute($self,-kernel=>shift()); + } else { + return $kernel; + } +} + +sub ramdiskId { + my $self = shift; + my $ramdisk = $self->SUPER::ramdiskId; + if (@_) { + return $self->aws->modify_instance_attribute($self,-ramdisk=>shift()); + } else { + return $ramdisk; + } +} + +sub rootDeviceName { + my $self = shift; + my $root = $self->SUPER::rootDeviceName; + if (@_) { + return $self->aws->modify_instance_attribute($self,-root_device_name => shift()); + } else { + return $root; + } +} + +sub instanceType { + my $self = shift; + return $self->aws->modify_instance_attribute($self, + -instance_type=>shift()) if @_; + return $self->SUPER::instanceType; +} + +sub userData { + my $self = shift; + + if (@_) { + my $encoded = encode_base64(shift); + return $self->aws->modify_instance_attribute($self,-user_data=>$encoded); + } + + my $data = $self->aws->describe_instance_attribute($self,'userData') or return; + VM::EC2::Dispatch::load_module('MIME::Base64'); + return decode_base64($data); +} + +sub disableApiTermination { + my $self = shift; + return $self->aws->modify_instance_attribute($self, + -disable_api_termination=>shift()) if @_; + return $self->aws->describe_instance_attribute($self,'disableApiTermination') eq 'true'; +} + +sub instanceInitiatedShutdownBehavior { + my $self = shift; + return $self->aws->modify_instance_attribute($self, + -shutdown_behavior=>shift()) if @_; + return $self->aws->describe_instance_attribute($self,'instanceInitiatedShutdownBehavior'); +} + +sub current_status { + my $self = shift; + my ($i) = $self->aws->describe_instances(-instance_id=>$self->instanceId); + $i or croak "invalid instance: ",$self->instanceId; + $self->refresh($i) or return VM::EC2::Instance::State->invalid_state($self->aws); + return $i->instanceState; +} + +sub current_state { shift->current_status } # alias +sub status { shift->current_status } # legacy + +sub start { + my $self = shift; + my $wait = shift; + + my $s = $self->current_status; + croak "Can't start $self: run state=$s" unless $s eq 'stopped'; + my ($i) = $self->aws->start_instances($self) or return; + if ($wait) { + while ($i->current_status eq 'pending') { + sleep 5; + } + $self->refresh; + } + return $i; +} + +sub stop { + my $self = shift; + my $wait = shift; + + my $s = $self->current_status; + croak "Can't stop $self: run state=$s" unless $s eq 'running'; + + my ($i) = $self->aws->stop_instances($self); + if ($wait) { + while ($i->current_status ne 'stopped') { + sleep 5; + } + $self->refresh; + } + return $i; +} + +sub terminate { + my $self = shift; + my $wait = shift; + + my $s = $self->current_status; + croak "Can't terminate $self: run state=$s" + unless $s eq 'running' or $s eq 'stopped'; + + my $i = $self->aws->terminate_instances($self) or return; + if ($wait) { + while ($i->current_status ne 'terminated') { + sleep 5; + } + $self->refresh; + } + return $i; +} + +sub reboot { + my $self = shift; + + my $s = $self->current_status; + croak "Can't reboot $self: run state=$s"unless $s eq 'running'; + return $self->aws->reboot_instances($self); +} + +sub upTime { + my $self = shift; + my $start = $self->launchTime; + VM::EC2::Dispatch::load_module('Date::Parse'); + my $sec = Date::Parse::str2time($start); + return time()-$sec; +} + +sub associate_address { + my $self = shift; + my $addr = shift or croak "Usage: \$instance->associate_address(\$elastic_address)"; + my $r = $self->aws->associate_address($addr => $self->instanceId); + return $r; +} + +sub disassociate_address { + my $self = shift; + my $addr = $self->aws->describe_addresses(-filter=>{'instance-id'=>$self->instanceId}); + $addr or croak "Instance $self is not currently associated with an elastic IP address"; + my $r = $self->aws->disassociate_address($addr); + return $r; +} + +sub refresh { + my $self = shift; + my $i = shift; + ($i) = $self->aws->describe_instances(-instance_id=>$self->instanceId) unless $i; + %$self = %$i; +} + +sub console_output { + my $self = shift; + my $output = $self->aws->get_console_output(-instance_id=>$self->instanceId); + return $output->output; +} + +sub create_image { + my $self = shift; + my %args; + if ($_[0] !~ /^-/) { + my ($name,$description) = @_; + $args{-name} = $name; + $args{-description} = $description if defined $description; + } else { + %args = @_; + } + $args{-name} or croak "Usage: create_image(\$image_name)"; + return $self->aws->create_image(%args,-instance_id=>$self->instanceId); +} + +sub attach_volume { + my $self = shift; + my %args; + if (@_==2 && $_[0] !~ /^-/) { + my ($volume,$device) = @_; + $args{-volume_id} = $volume; + $args{-device} = $device; + } else { + %args = @_; + } + $args{-volume_id} && $args{-device} + or croak "usage: \$vol->attach(\$instance_id,\$device)"; + $args{-instance_id} = $self->instanceId; + return $self->aws->attach_volume(%args); +} + +sub detach_volume { + my $self = shift; + my %args; + + if (@_ == 1 && $_[0] !~ /^-/) { + my $vol_or_device = shift; + $self->refresh; + my @mappings = $self->blockDeviceMapping; + my ($mapping) = grep {$_->deviceName eq $vol_or_device} @mappings; + if ($mapping) { + $args{-volume_id} = $mapping->volumeId; + $args{-device} = $mapping->deviceName; + } else { + $args{-volume_id} = $vol_or_device; + } + } else { + %args = @_; + } + $args{-instance_id} = $self->instanceId; + return $self->aws->detach_volume(%args); +} + +sub metadata { + my $self = shift; + return $self->aws->instance_metadata; +} + +sub productCodes { + my $self = shift; + my $codes = $self->SUPER::productCodes or return; + return map {$_->{productCode}} @{$codes->{item}}; +} + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/ConsoleOutput.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/ConsoleOutput.pm new file mode 100644 index 0000000..9aa507f --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/ConsoleOutput.pm @@ -0,0 +1,85 @@ +package VM::EC2::Instance::ConsoleOutput; + +=head1 NAME + +VM::EC2::ConsoleOutput - Object describing console output from +an Amazon EC2 instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instance(-instance_id=>'i-123456'); + + my $out = $instance->console_output; + + print $out,"\n"; + my $ts = $out->timestamp; + my $instance = $out->instanceId; + +=head1 DESCRIPTION + +This object represents the output from the console of a Amazon EC2 +instance. The instance may be running, pending or stopped. It is +returned by VM::EC2->get_console_output(), as well as +VM::EC2::Instance->console_output. + +Please see L for methods shared by all VM::EC2 +objects. + +=head1 METHODS + +These object methods are supported: + + requestId -- ID of the request that generated this object + instanceId -- ID of the instance that generated this output + timestamp -- Time that this output was generated + output -- Text of the console output + +=head1 STRING OVERLOADING + +When used in a string context, this object will act as if its output() +method was called, allowing it to be printed or searched directly. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use MIME::Base64; + +use overload '""' => 'output', + fallback => 1; + +sub valid_fields { + my $self = shift; + return $self->SUPER::valid_fields, + qw(requestId instanceId timestamp output); +} + +sub output { + my $self = shift; + my $out = $self->SUPER::output; + return decode_base64($out); +} + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/Metadata.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/Metadata.pm new file mode 100644 index 0000000..163fb86 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/Metadata.pm @@ -0,0 +1,331 @@ +package VM::EC2::Instance::Metadata; + +=head1 NAME + +VM::EC2::Instance::Metadata - Object describing the metadata of a running instance + +=head1 SYNOPSIS + + # For use within a running EC2 instance only! + + use VM::EC2::Instance::Metadata; + my $meta = VM::EC2::Instance::Metadata->new; + + # alternatively... + my $meta = VM::EC2->instance_metadata; + my $meta = $instance->metadata; + + # image information + $image_id = $meta->imageId; + $index = $meta->imageLaunchIndex; + $path = $meta->amiManifestPath; + $location = $meta->imageLocation; # same as previous + @ancestors = $meta->ancestorAmiIds; + @ancestors = $meta->imageAncestorIds; # same as previous + @codes = $meta->productCodes; + + # launch and runtime information + $inst_id = $meta->instanceId; + $kern_id = $meta->kernelId; + $rd_id = $meta->ramdiskId; + $res_id = $meta->reservationId; + $type = $meta->instanceType; + $zone = $meta->availabilityZone; + $userdata = $meta->userData; + @groups = $meta->securityGroups; + @keys = $meta->publicKeys; + $block_dev = $meta->blockDeviceMapping; # a hashref + + # Network information + $priv_name = $meta->localHostname; + $priv_name = $meta->privateDnsName; # same as previous + $priv_ip = $meta->localIpv4; + $priv_ip = $meta->privateIpAddress; + $mac = $meta->mac; + $pub_name = $meta->publicHostname; + $pub_name = $meta->dnsName; # same as previous + $pub_ip = $meta->publicIpv4; + $pub_ip = $meta->ipAddress; + $interfaces= $meta->interfaces; # a hashref + + # Undocumented fields + $action = $meta->instanceAction; + $profile = $meta->profile; + +=head1 DESCRIPTION + +This is an interface to the metadata that is provided to a running +instance via the http://169.254.169.254/latest URL, as described in +http://docs.amazonwebservices.com/AWSEC2/latest/UserGuide/index.html?instancedata-data-categories.html. + +Each metadata object caches its values, so there is no overhead in +calling a method repeatedly. Methods return scalar values, lists and +hashrefs as appropriate. + +The methods from this class should only be called within the context +of a running EC2 instance. Attempts to call outside of this +context will result in long delays as the module attempts to +connect to an invalid hostname. + +=head1 METHODS + +=head2 $meta = VM::EC2::Instance::Metadata->new() +=head2 $meta = $ec2->instance_metadata() +=head2 $meta = $instance->metadata() + +You can create a new metadata object either using this class's new() +constructor, or by calling an VM::EC2 object's instance_metadata() +method, or by calling a VM::EC2::Instance object's metadata () method. + +=head2 Methods that return scalar values + +The following methods all return single-valued results: + +=over 4 + +=item Image information: + + imageId -- ID of AMI used to launch this instance + imageLaunchIndex -- This index's launch index. If four instances + were launched by one $image->run_instances() + call, they will be numbered from 0 to 3. + amiManifestPath -- S3 path to the image + imageLocation -- Same as amiManifestPath(), for consistency with + VM::EC2::Image + +=item Launch and runtime information: + + instanceId -- ID of this instance + kernelId -- ID of this instance's kernel. + ramdiskId -- This instance's ramdisk ID + reservationId -- This instance's reservation ID + instanceType -- Machine type, e.g. "m1.small" + availabilityZone -- This instance's availability zone. + userData -- User data passed at launch time. + +=item Network information: + + localHostname -- The instance hostname corresponding to its + internal EC2 IP address. + privateDnsName -- Same as localHostname(), for consistency with + VM::EC2::Instance + localIpv4 -- The instance IP address on the internal EC2 network. + privateIpAddress -- Same as localIpv4(), for consistency with + VM::EC2::Instance. + mac -- This instance's MAC (ethernet) address. + publicHostname -- This instance's public hostname. + dnsName -- Same as publicHostname() for consistency with + VM::EC2::Instance. + publicIpv4 -- This instance's public IP address. + ipAddress -- Same as publicIpv4() for consistency with + VM::EC2::Instance. +=item Unknown information: + + profile -- An undocumented field that contains the virtualization + type in the form "default-paravirtual". + instanceAction -- Undocumented metadata field named "instance-action" + +=back + +=head2 Methods that return lists + +The following methods all return lists. + +=over 4 + +=item Image information + + ancestorAmiIds -- List of AMIs from which the current one was derived + imageAncestorIds -- Same as ancestorAmiIds() but easier to read. + productCodes -- List of product codes applying to the image from which + this instance was launched. + +=item Launch and runtime information + + securityGroups -- List of security groups to which this instance is assigned. + For non-VPC instances, this will be the security group + name. For VPC instances, this will be the security group ID. + publicKeys -- List of public key pair names attached to this instance. + +=back + +=head2 Methods that return a hashref + +The following methods return a hashref for representing complex data structures: + +=over 4 + +=item $devices = $meta->blockDeviceMapping + +This returns a hashref in which the keys are the names of instance +block devices, such as "/dev/sda1", and the values are the EC2 virtual +machine names. For example: + + x $meta->blockDeviceMapping + 0 HASH(0x9b4f2f8) + '/dev/sda1' => 'root' + '/dev/sda2' => 'ephemeral0' + '/dev/sdg' => 'ebs1' + '/dev/sdh' => 'ebs9' + '/dev/sdi' => 'ebs10' + 'sda3' => 'swap' + +For reasons that are not entirely clear, the swap device is reported +as "sda3" rather than as "/dev/sda3". + +=item $interfaces = $meta->interfaces + +Returns a mapping of all virtual ethernet devices owned by this +instance. This is primarily useful for VPC instances, which can have +more than one device. The hash keys are the MAC addresses of each +ethernet device, and the values are hashes that have the following +keys: + + mac + localHostname + localIpv4s (an array ref) + publicIpv4s (an array ref) + securityGroupIds (an array ref) + subnetId + subnetIpv4CidrBlock + vpcId + vpcIpv4CidrBlock + +For example: + + D + x $meta->interfaces + 0 HASH(0x9b4f518) + '12:31:38:01:b8:97' => HASH(0x9eaa090) + 'localHostname' => 'domU-12-31-38-01-B8-97.compute-1.internal' + 'localIpv4s' => ARRAY(0x9b4f8a8) + 0 '10.253.191.101' + 'mac' => '12:31:38:01:b8:97' + 'publicIpv4s' => ARRAY(0x9ea9e40) + 0 '184.73.241.210' + 'securityGroupIds' => ARRAY(0x9eaa490) + empty array + 'subnetId' => undef + 'subnetIpv4CidrBlock' => undef + 'vpcId' => undef + 'vpcIpv4CidrBlock' => undef + +=back + +=head1 SEE ALSO + +L +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use LWP::UserAgent; +use Carp 'croak'; + +use constant TIMEOUT => 5; # seconds +my $global_cache = {}; + +sub new { + my $pack = shift; + return bless { cache => {} },ref $pack || $pack; +} + +sub imageId { shift->fetch('ami-id') } +sub imageLaunchIndex { shift->fetch('ami-launch-index') } +sub amiManifestPath { shift->fetch('ami-manifest-path')} +sub imageLocation { shift->amiManifestPath } +sub ancestorAmiIds { split /\s+/,shift->fetch('ancestor-ami-ids') } +sub imageAncestorIds { shift->ancestorAmiIds } +sub instanceAction { shift->fetch('instance-action') } +sub instanceId { shift->fetch('instance-id') } +sub instanceType { shift->fetch('instance-type') } +sub localHostname { shift->fetch('local-hostname') } +sub privateDnsName { shift->localHostname } +sub localIpv4 { shift->fetch('local-ipv4') } +sub privateIpAddress { shift->localIpv4 } +sub kernelId { shift->fetch('kernel-id') } +sub mac { shift->fetch('mac') } +sub availabilityZone { shift->fetch('placement/availability-zone') } +sub productCodes { split /\s+/,shift->fetch('product-codes') } +sub publicHostname { shift->fetch('public-hostname') } +sub dnsName { shift->publicHostname } +sub publicIpv4 { shift->fetch('public-ipv4') } +sub ipAddress { shift->publicIpv4 } +sub ramdiskId { shift->fetch('ramdisk-id') } +sub reservationId { shift->fetch('reservation-id') } +sub securityGroups { split /\s+/,shift->fetch('security-groups') } +sub profile { shift->fetch('profile') } +sub userData { shift->fetch('../user-data') } + +sub blockDeviceMapping { + my $self = shift; + my @devices = split /\s+/,$self->fetch('block-device-mapping'); + my %map = map {$self->fetch("block-device-mapping/$_") => $_} @devices; + return \%map; +} +sub interfaces { + my $self = shift; + my @macs = split /\s+/,$self->fetch('network/interfaces/macs'); + my %result; + for my $m (@macs) { + $m =~ s/\/$//; # get rid of hanging slash + for my $pair ([localHostname => 'local-hostname'], + [localIpv4s => 'local-ipv4s'], + [mac => 'mac'], + [publicIpv4s => 'public-ipv4s'], + [securityGroupIds => 'security-groupids'], + [subnetId => 'subnet-id'], + [subnetIpv4CidrBlock => 'subnet-ipv4-cidr-block'], + [vpcId => 'vpc-id'], + [vpcIpv4CidrBlock => 'vpc-ipv4-cidr-block']) { + my ($tag,$attribute) = @$pair; + my $value = $self->fetch("network/interfaces/macs/$m/$attribute"); + my @value = split /\s+/,$value; + $result{$m}{$tag} = $attribute =~ /s$/ ? \@value : $value; + } + } + return \%result; +} + +sub publicKeys { + my $self = shift; + my @keys = split /\s+/,$self->fetch('public-keys'); + return map {/^\d+=(.+)/ && $1} @keys; +} + +sub fetch { + my $self = shift; + my $attribute = shift or croak "Usage: VM::EC2::Instance::Metadata->get('attribute')"; + my $cache = $self->{cache} || $global_cache; # protect against class invocation + return $cache->{$attribute} if exists $cache->{$attribute}; + my $ua = $self->{ua} ||= LWP::UserAgent->new(); + $ua->timeout(TIMEOUT); + my $response = $ua->get("http://169.254.169.254/latest/meta-data/$attribute"); + if ($response->is_success) { + return $cache->{$attribute} = $response->decoded_content; + } else { + print STDERR $response->status_line,"\n" unless $response->code == 404; + return; + } +} + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/MonitoringState.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/MonitoringState.pm new file mode 100644 index 0000000..895bb35 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/MonitoringState.pm @@ -0,0 +1,95 @@ +package VM::EC2::Instance::MonitoringState; + +=head1 NAME + +VM::EC2::MonitoringState - Object describing the monitoring state of an EC2 instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $monitor = $ec2->monitor_instances('i-12345'); + $instance = $monitor->instanceId; + $monitoring = $monitor->monitoring; + + $monitor->enable; + $monitor->disable; + +=head1 DESCRIPTION + +This object represents the monitoring state of an Amazon EC2 instance. + +=head1 METHODS + +These object methods are supported: + + instanceId -- The instance that is being reported + monitoring -- The monitoring state: one of "disabled", "enabled", "pending" + +To turn monitoring of an instance on, call: + + $monitor->enable(); + +to unmonitor an instance, call: + + $monitor>disable(); + +It is probably easier to control this using the Instance object's monitoring() method. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +string "$instanceId monitoring is $monitoring". + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use overload '""' => sub { + my $self = shift; + my $instance = $self->instanceId; + my $monitoring = $self->monitoring; + return "$instance monitoring is $monitoring"; + }, + fallback => 1; + +sub valid_fields { + return qw(instanceId monitoring); +} + +sub monitoring { + my $self = shift; + my $m = $self->SUPER::monitoring; + return $m->{state}; +} + +sub enable { + my $self = shift; + return $self->aws->monitor_instances($self->instanceId); +} + +sub disable { + my $self = shift; + return $self->aws->unmonitor_instances($self->instanceId); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/PasswordData.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/PasswordData.pm new file mode 100644 index 0000000..c68e33c --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/PasswordData.pm @@ -0,0 +1,70 @@ +package VM::EC2::Instance::PasswordData; + +=head1 NAME + +VM::EC2::PasswordData - Object describing the administrative password stored in an EC2 Windows instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instances(-instance_id=>'i-12345'); + $pass = $instance->password_data; + print $pass->password,"\n"; + print $pass->timestamp,"\n" + +=head1 DESCRIPTION + +This object represents the administrative password stored in a Windows +EC2 instance. It is returned by calling either +VM::EC2->get_password_data or a VM::EC2::Instance object's +password_data() method. + +=head1 METHODS + +These object methods are supported: + + instanceId -- ID of the instance + timestamp -- The time the data was last updated. + passwordData -- The password of the instance. + password() -- Same as passwordData(). + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +password. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use overload '""' => 'password', + fallback => 1; + +sub valid_fields { + my $self = shift; + return $self->SUPER::valid_fields, + qw(requestId instanceId timestamp passwordData); +} + +sub password {shift->passwordData} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/Placement.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/Placement.pm new file mode 100644 index 0000000..9adcc2e --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/Placement.pm @@ -0,0 +1,63 @@ +package VM::EC2::Instance::Placement; + +=head1 NAME + +VM::EC2::Instance::Placement - Object describing an Amazon EC2 instance's placement + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + +=head1 DESCRIPTION + +This object represents the placement of an instance in an Amazon EC2 availability region +and cluster group. It is returned by VM::EC2->describe_instances + +=head1 METHODS + +These object methods are supported: + + availabilityZone -- The availability zone of the instance. + groupName -- The name of the placement group in a + cluster computing instance. + tenancy -- Tenancy of the instance, e.g. "dedicated". + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +availabilityZone. + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +use overload + '""' => sub {shift()->availabilityZone}, + fallback => 1; + +sub valid_fields { + my $self = shift; + return qw(availabilityZone groupName tenancy); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/Set.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/Set.pm new file mode 100644 index 0000000..4dbd9a2 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/Set.pm @@ -0,0 +1,88 @@ +package VM::EC2::Instance::Set; + +=head1 NAME + +VM::EC2::Instance::Set - Object describing a set of instances + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @instances = $ec2->run_instances(-image_id=>'ami-12345'); + for my $i (@instances) { + $res = $i->reservationId; + $req = $i->requesterId; + $owner = $i->ownerId; + @groups = $i->groups; + } + +=head1 DESCRIPTION + +This object is used internally to manage the output of +VM::EC2->run_instances(), which returns information about the +reservation and security groups as well as the list of launched +instances. Because reservations are infrequently used, this object is +not used directly; instead the reservation and requester IDs contained +within it are stored in the VM::EC2::Instance objects returned +by run_instances(). + +=head1 METHODS + +One object method is supported: + +=head2 @instances = $reservation_set->instances() + +This will return the instances contained within the instance set. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::Instance; +use VM::EC2::Group; + +sub instances { + my $self = shift; + + my $p = $self->payload; + my $reservation_id = $p->{reservationId}; + my $owner_id = $p->{ownerId}; + my $requester_id = $p->{requesterId}; + my @groups = map {VM::EC2::Group->new($_,$self->aws, + $self->xmlns,$self->requestId)} @{$p->{groupSet}{item}}; + + my $instances = $p->{instancesSet}{item}; + return map {VM::EC2::Instance->new( + -instance => $_, + -aws => $self->aws, + -xmlns => $self->xmlns, + -requestId => $self->requestId, + -reservation => $reservation_id, + -requester => $requester_id, + -owner => $owner_id, + -groups => \@groups) + } @$instances; +} + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/State.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/State.pm new file mode 100644 index 0000000..3d8f037 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/State.pm @@ -0,0 +1,88 @@ +package VM::EC2::Instance::State; + +=head1 NAME + +VM::EC2::State - Object describing the state of an EC2 instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instances(-instance_id=>'i-12345'); + $state = $instance->state; + $code = $state->code; + $name = $state->name; + +=head1 DESCRIPTION + +This object represents the state of an Amazon EC2 instance. It is +returned by calling the state() method of an VM::EC2::Instance, +and is also returned by VM::EC2->start_instances(), stop_instances() and +terminate_instances(). + +=head1 METHODS + +These object methods are supported: + + code -- The state code + name -- The state name + + Code Name + ---- ------- + 0 pending + 16 running + 32 shutting-down + 48 terminated + 64 stopping + 80 stopped + 272 + +Code 272 is said to correspond to a problem with the instance host. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +name. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use overload '""' => 'name', + fallback => 1; + +sub new { + my $self = shift; + my $state = shift; + return bless \$state,ref $self || $self; +} + +sub code { ${shift()}->{code} } +sub name { ${shift()}->{name} } + +sub invalid_state { + my $self = shift; + my $aws = shift; + return $self->new({code=>undef,name=>'invalid'},$aws); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/State/Change.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/State/Change.pm new file mode 100644 index 0000000..a116f32 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/State/Change.pm @@ -0,0 +1,30 @@ +package VM::EC2::Instance::State::Change; + +use strict; +use base 'VM::EC2::Generic'; +use Carp 'croak'; +use VM::EC2::Instance::State; + +use overload '""' => sub {shift()->currentState}, + fallback => 1; + +sub valid_fields { + my $self = shift; + return qw(instanceId currentState previousState); +} +sub currentState { + return VM::EC2::Instance::State->new(shift->SUPER::currentState); +} +sub previousState { + return VM::EC2::Instance::State->new(shift->SUPER::previousState); +} +sub current_status { + my $self = shift; + my $ec2 = $self->aws; + my $id = $self->instanceId; + my ($instance) = $ec2->describe_instances(-instance_id=>$id); + $instance or croak "invalid instance: $id"; + return $instance->instanceState; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Instance/State/Reason.pm b/perl/share/perl/5.10.1/VM/EC2/Instance/State/Reason.pm new file mode 100644 index 0000000..44d66c5 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Instance/State/Reason.pm @@ -0,0 +1,98 @@ +package VM::EC2::State::Reason; + +=head1 NAME + +VM::EC2::State::Reason - Object describing the reason for an EC2 instance state change + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $instance = $ec2->describe_instances(-instance_id=>'i-12345'); + $reason = $instance->reason; + $code = $reason->code; + $message = $reason->message; + +=head1 DESCRIPTION + +This object represents the reason that an Amazon EC2 instance +underwent a state change. It is returned by calling the reason() +method of VM::EC2::Instance. + +=head1 METHODS + +These object methods are supported: + + code -- The state change reason code. + message -- The state change reason method. + +The following table lists the codes and messages (source: +http://docs.amazonwebservices.com/AWSEC2/latest/APIReference/ApiReference-ItemType-StateReasonType.html): + + Code Message + ---- ------- + Server.SpotInstanceTermination A Spot Instance was terminated due + to an increase in the market price. + + Server.InternalError An internal error occurred during + instance launch, resulting in termination. + + Server.InsufficientInstanceCapacity There was insufficient instance capacity + to satisfy the launch request. + + Client.InternalError A client error caused the instance to + terminate on launch. + + Client.InstanceInitiatedShutdown The instance initiated shutdown by a shutdown -h + command issued from inside the instance. + + Client.UserInitiatedShutdown The instance was shutdown by a user via an + API call. + + Client.VolumeLimitExceeded The volume limit was exceeded. + + Client.InvalidSnapshot.NotFound The specified snapshot was not found. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +message. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +use overload '""' => 'message', + fallback => 1; + +sub new { + my $self = shift; + my $state = shift; + return bless \$state,ref $self || $self; +} + +sub code { ${shift()}->{code} } +sub message { ${shift()}->{message} } + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/KeyPair.pm b/perl/share/perl/5.10.1/VM/EC2/KeyPair.pm new file mode 100644 index 0000000..fee138c --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/KeyPair.pm @@ -0,0 +1,79 @@ +package VM::EC2::KeyPair; + +=head1 NAME + +VM::EC2::KeyPair - Object describing an Amazon EC2 ssh key pair + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @pairs = $ec2->describe_key_pairs(); + + foreach (@pairs) { + $fingerprint = $_->keyFingerprint; + $name = $_->keyName; + } + + $newkey = $ec2->create_key_pair("fred's key"); + print $newkey->privateKey; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 ssh key pair, and is returned +by VM::EC2->describe_key_pairs(). + +=head1 METHODS + +These object methods are supported: + + keyName -- Name of the key, e.g. "fred-default" + name -- Shorter version of keyName() + + keyFingerprint -- Key's fingerprint + fingerprint -- Shorter version of keyFingerprint() + + keyMaterial -- PEM encoded RSA private key (only available when + creating a new key) + privateKey -- More intuitive version of keyMaterial() + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +keyName. + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {shift->keyName} + +sub valid_fields { + my $self = shift; + return qw(requestId keyName keyFingerprint keyMaterial); +} + +sub name { shift->keyName } +sub fingerprint { shift->keyFingerprint } +sub privateKey { shift->keyMaterial } + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Region.pm b/perl/share/perl/5.10.1/VM/EC2/Region.pm new file mode 100644 index 0000000..ca0bcde --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Region.pm @@ -0,0 +1,77 @@ +package VM::EC2::Region; + +=head1 NAME + +VM::EC2::Region - Object describing an Amazon region + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @regions = $ec2->describe_regions(); + + $region = $regions[0]; + $name = $region->regionName; + $url = $region->regionEndpoint; + @zones = $region->zones; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 region, and is returned +by VM::EC2->describe_regions(). + +=head1 METHODS + +These object methods are supported: + + regionName -- Name of the region, e.g. "eu-west-1" + regionEndpoint -- URL endpoint for AWS API calls, e.g. + "ec2.eu-west-1.amazonaws.com" + zones -- List of availability zones within this + region, as VM::EC2::AvailabilityZone + objects. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +regionName. + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {shift->regionName} + +sub valid_fields { + my $self = shift; + return qw(regionName regionEndpoint); +} + +sub zones { + my $self = shift; + my $aws = $self->aws; + # break encapsulation, but it is elegant this way + local $aws->{endpoint} = 'http://'.$self->regionEndpoint; + return $aws->describe_availability_zones(-filter=>{'region-name'=>$self}); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/ReservationSet.pm b/perl/share/perl/5.10.1/VM/EC2/ReservationSet.pm new file mode 100644 index 0000000..e5a679b --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/ReservationSet.pm @@ -0,0 +1,67 @@ +package VM::EC2::ReservationSet; + +=head1 NAME + +VM::EC2::Reservation - Object describing an instance reservation set + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @instances = $ec2->describe_instances(); + for my $i (@instances) { + $res = $i->reservationId; + $req = $i->requesterId; + $owner = $i->ownerId; + @groups = $i->groups; + } + +=head1 DESCRIPTION + +This object is used internally to manage the output of +VM::EC2->describe_instances(). Because reservations are infrequently +used, this object is not used directly; instead the reservation and +requester IDs contained within it are stored in the +VM::EC2::Instance objects returned by describe_instances(). + +=head1 METHODS + +One object method is supported: + +=head2 @instances = $reservation_set->instances() + +This will return the instances contained within the reservation set. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::Instance::Set; +use VM::EC2::Group; + +sub instances { + my $self = shift; + my $r = $self->payload->{reservationSet}{item} or return; + return map {VM::EC2::Instance::Set->new($_,$self->aws,$self->xmlns,$self->requestId)->instances} @$r; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/ReservedInstance.pm b/perl/share/perl/5.10.1/VM/EC2/ReservedInstance.pm new file mode 100644 index 0000000..cf15f4a --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/ReservedInstance.pm @@ -0,0 +1,138 @@ +package VM::EC2::ReservedInstance; + +=head1 NAME + +VM::EC2::ReservedInstance - Object describing an Amazon EC2 reserved instance + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @offerings = $ec2->describe_reserved_instances(); + for my $o (@offerings) { + print $o->reservedInstancesId,"\n"; + print $o->instanceType,"\n"; + print $o->availabilityZone,"\n"; + print $o->start,"\n"; + print $o->duration,"\n"; + print $o->fixedPrice,"\n"; + print $o->usagePrice,"\n"; + print $o->instanceCount,"\n"; + print $o->productDescription,"\n"; + print $o->state,"\n"; + print $o->instanceTenancy,"\n"; + print $o->currencyCode,"\n"; + $tags = $o->tags; + } +=head1 DESCRIPTION + +This object represents an Amazon EC2 reserved instance reservation +that you have purchased, as returned by +VM::EC2->describe_reserved_instances(). + +=head1 METHODS + +These object methods are supported: + + reservedInstancesId -- ID of this reserved instance contract + + instanceType -- The instance type on which these reserved + instance can be used. + + availabilityZone -- The availability zone in which these reserved + instances can be used. + + start -- The date and time that this contract was established. + + duration -- The duration of this contract, in seconds. + + fixedPrice -- The purchase price of the reserved instance for the indicated + version. + + usagePrice -- The usage price of the reserved instance, per hour. + + instanceCount -- The number of instances that were purchased under this contract. + + productDescription -- The reserved instance description. One of "Linux/UNIX", + "Linux/UNIX (Amazon VPC)", "Windows", and "Windows (Amazon VPC)" + + state -- The state of the reserved instance purchase. One of "payment-pending", + "active", "payment-failed", and "retired". + + tagSet -- Tags for this reserved instance set. More conveniently accessed via + the tags(), add_tags() and delete_tags() methods. + + instanceTenancy -- The tenancy of the reserved instance (VPC only). + + currencyCode -- The currency of the reserved instance offering prices. + +This object supports the various tag manipulation methods described in +L. In addition it supports the following methods: + +=head2 $status = $reserved_instance->current_status + +Refreshes the object and returns its state, one of "payment-pending", +"active", "payment-failed", and "retired". You can use this to monitor +the progress of a purchase. + +=head2 $reserved_instance->refresh + +Calls VM::EC2->describe_reserved_instances() to refresh the object +against current information in Amazon. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +reservedInstancesId. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {shift->reservedInstancesId} + +sub valid_fields { + my $self = shift; + return qw(reservedInstancesId instanceType availabilityZone + start duration fixedPrice usagePrice instanceCount + productDescription state tagSet instanceTenancy + currencyCode); +} + +sub current_status { + my $self = shift; + $self->refresh; + return $self->state; +} + +sub current_state { shift->current_status } # alias + +sub refresh { + my $self = shift; + my $i = $self->ec2->describe_reserved_instances($self->reservedInstancesId) + or die $self->ec2->error_str; + %$self = %$i; +} + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/ReservedInstance/Offering.pm b/perl/share/perl/5.10.1/VM/EC2/ReservedInstance/Offering.pm new file mode 100644 index 0000000..80bda44 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/ReservedInstance/Offering.pm @@ -0,0 +1,113 @@ +package VM::EC2::ReservedInstance::Offering; + +=head1 NAME + +VM::EC2::ReservedInstance::Offering - Object describing an Amazon EC2 reserved instance offering + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @offerings = $ec2->describe_reserved_instances_offerings(); + for my $o (@offerings) { + print $o->reservedInstancesOfferingId,"\n"; + print $o->instanceType,"\n"; + print $o->availabilityZone,"\n"; + print $o->duration,"\n"; + print $o->fixedPrice,"\n"; + print $o->usagePrice,"\n"; + print $o->productDescription,"\n"; + print $o->instanceTenancy,"\n"; + print $o->currencyCode,"\n"; + } + + # purchase the first one + $offerings[0]->purchase() && print "offer purchased\n"; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 reserved instance offering, as +returned by VM::EC2->describe_reserved_instances_offerings. + +=head1 METHODS + +These object methods are supported: + + reservedInstancesOfferingId -- ID of this offer + + instanceType -- The instance type on which this reserved + instance can be used. + + availabilityZone -- The availability zone in which this reserved + instance can be used. + + duration -- The duration of the reserved instance contract, in seconds. + + fixedPrice -- The purchase price of the reserved instance for the indicated + version. + + usagePrice -- The usage price of the reserved instance, per hour. + + productDescription -- The reserved instance description. One of "Linux/UNIX", + "Linux/UNIX (Amazon VPC)", "Windows", and "Windows (Amazon + VPC)" + + instanceTenancy -- The tenancy of the reserved instance (VPC only). + + currencyCode -- The currency of the reserved instance offering prices. + +In addition, this object supports the purchase() method: + +=head2 $boolean = $offering->purchase($count) + +Purchases the offering and returns true on success. The optional +$count argument specifies the number of reserved instances to purchase +(default 1). + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +reservedInstancesOfferingId. + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub primary_id {shift->reservedInstancesOfferingId} + +sub valid_fields { + my $self = shift; + return qw(reservedInstancesOfferingId instanceType availabilityZone + duration fixedPrice usagePrice productDescription instanceTenancy + currencyCode); +} + +sub purchase { + my $self = shift; + my $count = shift || 1; + return $self->ec2->purchase_reserved_instances_offering + (-instance_count=>$count, + -reserved_instances_offering_id=>$self->reservedInstancesOfferingId + ); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/SecurityGroup.pm b/perl/share/perl/5.10.1/VM/EC2/SecurityGroup.pm new file mode 100644 index 0000000..0462c48 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/SecurityGroup.pm @@ -0,0 +1,394 @@ +package VM::EC2::SecurityGroup; + +=head1 NAME + +VM::EC2::SecurityGroup - Object describing an Amazon EC2 security group + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @sg = $ec2->describe_security_groups; + for my $sg (@sg) { + $name = $sg->groupName; + $id = $sg->groupId; + $desc = $sg->groupDescription; + $tags = $sg->tags; + @inbound_permissions = $sg->ipPermissions; + @outbound_permissions = $sg->ipPermissionEgress; + for $i (@inbound_permissions) { + $protocol = $i->ipProtocol; + $fromPort = $i->fromPort; + $toPort = $i->toPort; + @ranges = $i->ipRanges; + } + } + + $sg = $sg[0]; + + # Add a new security rule + $sg->authorize_incoming(-protocol => 'tcp', + -port => 80, + -source_ip => ['192.168.2.0/24','192.168.2.1/24'}); + + # write it to AWS. + $sg->update(); + +=head1 DESCRIPTION + +This object is used to describe an Amazon EC2 security group. It is +returned by VM::EC2->describe_security_groups(). You may also obtain +this object by calling an Instance object's groups() method, and then +invoking one of the group's permissions() method. See +L. + +=head1 METHODS + +The following object methods are supported: + + ownerId -- Owner of this security group + groupId -- ID of this security group + groupName -- Name of this security group + groupDescription -- Description of this group + vpcId -- Virtual Private Cloud ID, if applicable + ipPermissions -- A list of rules that govern incoming connections + to instances running under this security group. + Each rule is a + L object. + ipPermissionsEgress -- A list of rules that govern outgoing connections + from instances running under this security group. + Each rule is a + L. + This field is only valid for VPC groups. + tags -- Hashref containing tags associated with this group. + See L. + +For convenience, the following aliases are provided for commonly used methods: + + inbound_permissions -- same as ipPermissions() + outbound_permissions -- same as ipPermissionsEgress() + name -- same as groupName() + +See L for details on accessing +port numbers, IP ranges and other fields associated with incoming and +outgoing firewall rules. + +=head1 MODIFYING FIREWALL RULES + +To add or revoke firewall rules, call the authorize_incoming, +authorize_outgoing, revoke_incoming or revoke_outgoing() methods +one or more times. Each of these methods either adds or removes a +single firewall rule. After adding or revoking the desired rules, call +update() to write the modified group back to Amazon. The object will +change to reflect the new permissions. + +=head2 $permission = $group->authorize_incoming(%args) + +Add a rule for incoming firewall traffic. Arguments are as follows: + + -protocol The protocol, either a string (tcp,udp,icmp) or + the corresponding protocol number (6, 17, 1). + Use -1 to indicate all protocols. (required) + + -port, -ports The port or port range. When referring to a single + port, you may use either the port number or the + service name (e.g. "ssh"). For this to work the + service name must be located in /etc/services. + When specifying a port range, use "start..end" as + in "8000..9000". Note that this is a string that + contains two dots, and not two numbers separated + by the perl range operator. For the icmp protocol, + this argument corresponds to the ICMP type number. + (required). + + -group, -groups Security groups to authorize. Instances that belong + to the named security groups will be allowed + access. You may specify either a single group or + a list of groups as an arrayref. The following + syntaxes are recognized: + + "sg-12345" authorize group with this groupId + "12345/my group" authorize group named "my group" + owned by user 12345 + "my group" authorize group named "my group" + owned by yourself + + -source, -source_ip Authorize incoming traffic from an IP address, IP + address range, or set of such ranges. IP + addresses use the CIDR notation of a.b.c.d/mask, + as described in + http://en.wikipedia.org/wiki/Classless_Inter-Domain_Routing. + Pass an arrayref to simultaneously authorize + multiple CIDR ranges. + +The result of this call is a L +object corresponding to the rule you defined. Note that the rule is +not written to Amazon until you call update(). + +Here are some examples: + + $sg->authorize_incoming(-protocol => 'tcp', + -port => 80, + -source_ip => ['192.168.2.0/24','192.168.2.1/24'}); + + # TCP on ports 22 and 23 from anyone + $sg->authorize_incoming(-protocol => 'tcp', + -port => '22..23', + -source_ip => '0.0.0.0/0'); + + # ICMP on echo (ping) port from anyone + $sg->authorize_incoming(-protocol => 'icmp', + -port => 0, + -source_ip => '0.0.0.0/0'); + + # TCP to port 25 (mail) from instances belonging to + # the "Mail relay" group belonging to user 12345678. + $sg->authorize_incoming(-protocol => 'tcp', + -port => 25, + -group => '12345678/Mail relay'); + +=head2 $permission = $group->authorize_outgoing(%args) + +This is identical to authorize_incoming() except that the rule applies +to outbound traffic. Only VPC security groups can define outgoing +firewall rules. + +=head2 $permission = $group->revoke_incoming($rule) + +=head2 $permission = $group->revoke_incoming(%args) + +This method revokes an incoming firewall rule. You can call it with a +single argument consisting of a +L object in order to revoke that +rule. Alternatively, when called with the named arguments listed for +authorize_incoming(), it will attempt to match an existing rule to the +provided arguments and queue it for deletion. + +Here is an example of revoking all rules that allow ssh (port 22) +access: + + @ssh_rules = grep {$_->fromPort == 22} $group->ipPermissions; + $group->revoke_incoming($_) foreach @ssh_rules; + $group->update(); + +=head2 $boolean = $group->update() + +This method will write all queued rule authorizations and revocations +to Amazon, and return a true value if successful. The method will +return false if any of the rule updates failed. You can examine the +VM::EC2 object's error_str() method to determine what went wrong, and +check the group object's ipPermissions() method to see what firewall +rules are currently defined. + +=head2 $boolean = $group->write() + +An alias for update() + +=head2 $group->refresh() + +This method refreshes the group information from Amazon. It is called +automatically by update(). + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +groupId. + +=head1 SEE ALSO + +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::SecurityGroup::IpPermission; +use Carp 'croak'; + +sub valid_fields { + return qw(ownerId groupId groupName groupDescription vpcId ipPermissions ipPermissionsEgress tagSet); +} + +sub primary_id { shift->groupId } + +sub name { shift->groupName } + +sub inbound_permissions { shift->ipPermissions } +sub outbound_permissions { shift->ipPermissionsEgress } + +sub ipPermissions { + my $self = shift; + my $p = $self->SUPER::ipPermissions or return; + my @p = map { VM::EC2::SecurityGroup::IpPermission->new($_, + $self->aws, + $self->xmlns, + $self->requestId) + } @{$p->{item}}; + + # tell ip permissions about the owner -- needed for the + # group name string. + my $owner = $self->ownerId; + foreach (@p) {$_->ownerId($owner)} + return @p; +} + +sub ipPermissionsEgress { + my $self = shift; + my $p = $self->SUPER::ipPermissionsEgress or return; + my @p = map { VM::EC2::SecurityGroup::IpPermission->new($_,$self->aws,$self->xmlns,$self->requestId)} + @{$p->{item}}; + + # tell ip permissions about the owner -- needed for the + # group name string. + my $owner = $self->ownerId; + foreach (@p) {$_->ownerId($owner)} + return @p; +} + +# generate a hash of the ingress permissions, for use in modification +sub _ingress_permissions { + my $self = shift; + return $self->{_ingress_permissions} if exists $self->{_ingress_permissions}; + my %h = map {("$_" => $_)} $self->ipPermissions; + return $self->{_ingress_permissions} = \%h; +} + +sub _egress_permissions { + my $self = shift; + return $self->{_egress_permissions} if exists $self->{_egress_permissions}; + my %h = map {("$_" => $_)} $self->ipPermissionsEgress; + return $self->{_egress_permissions} = \%h; +} + +sub _uncommitted_permissions { + my $self = shift; + my ($action,$direction) = @_; # e.g. 'Authorize','Ingress' + my $perms = $self->{uncommitted}{$action}{$direction} or return; + return values %$perms; +} + +sub authorize_incoming { + my $self = shift; + my $permission = $self->_new_permission(@_); + return if $self->_ingress_permissions->{$permission}; # already defined + $self->{uncommitted}{Authorize}{Ingress}{$permission}=$permission; +} + +sub authorize_outgoing { + my $self = shift; + my $permission = $self->_new_permission(@_); + return if $self->_egress_permissions->{$permission}; # already defined + $self->{uncommitted}{Authorize}{Egress}{$permission}=$permission; +} + +sub revoke_incoming { + my $self = shift; + my $permission = $_[0] =~ /^-/ ? $self->_new_permission(@_) : shift; + if ($self->{uncommitted}{Authorize}{Ingress}{$permission}) { + delete $self->{uncommitted}{Authorize}{Ingress}{$permission}; + } + return unless $self->_ingress_permissions->{$permission}; + $self->{uncommitted}{Revoke}{Ingress}{$permission}=$permission; +} + +sub revoke_outgoing { + my $self = shift; + my $permission = $_[0] =~ /^-/ ? $self->_new_permission(@_) : shift; + if ($self->{uncommitted}{Authorize}{Egress}{$permission}) { + delete $self->{uncommitted}{Authorize}{Egress}{$permission}; + } + return unless $self->_egress_permissions->{$permission}; + $self->{uncommitted}{Revoke}{Egress}{$permission}=$permission; +} + +# write permissions out to AWS +sub update { + my $self = shift; + my $aws = $self->aws; + local $aws->{error}; # so we can do a double-fetch + my $result = $aws->update_security_group($self); + $self->refresh; + return $result; +} + +sub write { shift->update } + +sub refresh { + my $self = shift; + my $i = $self->aws->describe_security_groups($self->groupId) or return; + %$self = %$i; +} + +sub _new_permission { + my $self = shift; + my %args = @_; + + my $data = {}; # xml + + my $protocol = lc $args{-protocol} or croak "-protocol argument required"; + $data->{ipProtocol} = $protocol; + + $args{-source_ip} ||= $args{-source}; + + my $ports = $args{-port} || $args{-ports}; + my ($from_port,$to_port); + if ($ports =~ /^(\d+)\.\.(\d+)$/) { + $from_port = $1; + $to_port = $2; + } elsif ($ports =~ /^-?\d+$/) { + $from_port = $to_port = $ports; + } elsif (my @p = getservbyname($ports,$protocol)) { + $from_port = $to_port = $p[2]; + } else { + croak "value of -port argument not recognized"; + } + $data->{fromPort} = $from_port; + $data->{toPort} = $to_port; + + my $group = $args{-groups} || $args{-group}; + my @groups = ref $group && ref $group eq 'ARRAY' ? @$group :$group ? ($group) : (); + for my $g (@groups) { + if ($g =~ /^sg-[a-f0-9]+$/) { + push @{$data->{groups}{item}},{groupId=>$g}; + } elsif (my ($userid,$groupname) = $g =~ m!(\d+)/(.+)!) { + push @{$data->{groups}{item}},{userId=>$userid,groupName=>$groupname}; + } else { + my $userid = $self->aws->account_id; + push @{$data->{groups}{item}},{userId=>$userid,groupName=>$g}; + } + } + + my $address = $args{-source_ip}; + $address && $group and croak "the -source_ip and -group arguments are mutually exclusive"; + $address ||= '0.0.0.0/0' unless $group; + + my @addresses = ref $address && ref $address eq 'ARRAY' ? @$address + :$address ? ($address) + : (); + foreach (@addresses) { $_ = '0.0.0.0/0' if $_ eq 'any' } + $data->{ipRanges}{item} = [map {{cidrIp=>$_}} @addresses] if @addresses; + + my $sg = VM::EC2::SecurityGroup::IpPermission->new($data,$self->aws); + $sg->ownerId($self->ownerId); + return $sg; +} + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/SecurityGroup/GroupPermission.pm b/perl/share/perl/5.10.1/VM/EC2/SecurityGroup/GroupPermission.pm new file mode 100644 index 0000000..d47ccaa --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/SecurityGroup/GroupPermission.pm @@ -0,0 +1,132 @@ +package VM::EC2::SecurityGroup::GroupPermission; + +=head1 NAME + +VM::EC2::SecurityGroup::GroupPermission - Object describing an authorized group within a security group firewall rule + +=head1 SYNOPSIS + + $ec2 = VM::EC2->new(...); + $sg = $ec2->describe_security_groups(-name=>'My Group'); + @rules = $sg->ipPermissions; + $rule = $rules[0]; + + @groups = $rule->groups; + for my $g (@groups) { + $userId = $g->userId; + $name = $g>groupName; + $id = $g->groupId; + $group_object = $g->security_group; + } + +=head1 DESCRIPTION + +This object describes a security group whose instances are granted +permission to exchange data traffic with another group of +instances. It is returned by the groups() method of +L. + +Note that this object is not the same as a bona fide +L, which has access to the group's firewall +rules. This object contains just the name, id and owner of a group +used within a firewall rule. For groups that belong to you, you can +get the full VM::EC2::SecurityGroup object by calling the +security_group() method. These details are not available to groups +that belong to other accounts. + +=head1 METHODS + +=cut + + +use strict; +use base 'VM::EC2::Generic'; + +=head2 $id = $group->groupId + +Return the group's unique ID. + +=head2 $id = $group->userId + +Return the account ID of the owner of this group. + +=head2 $id = $group->groupName + +Return this group's name. + +=cut + +sub valid_fields { + qw(userId groupId groupName); +} + +=head2 $string = $group->short_name + +Return a string for use in string overloading. See L. + +=cut + +sub short_name { + my $self = shift; + my $name = $self->groupName or return $self->groupId; + my $userid = $self->userId; + my $ownerid= $self->ownerId; + my $gname = $userid eq $ownerid ? $name : "$userid/$name"; + return $gname; +} + +=head2 $sg = $group->security_group + +For groups that belong to the current account, calls +VM::EC2->describe_security_groups() to turn the group name into a +L. For groups that belong to a different +account, will return undef, since describe_security_groups() on other +accounts is not allowed by Amazon. + +=cut + +sub security_group { + my $self = shift; + my $gid = $self->groupId or return; + return $self->aws->describe_security_groups($gid); +} + +sub ownerId { + my $self = shift; + my $d = $self->{ownerId}; + $self->{ownerId} = shift if @_; + $d; +} + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the user +id and group name in the form "userId/groupName" for groups that +belong to other accounts, and the groupName alone in the case of +groups that belong to you. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/SecurityGroup/IpPermission.pm b/perl/share/perl/5.10.1/VM/EC2/SecurityGroup/IpPermission.pm new file mode 100644 index 0000000..3570b31 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/SecurityGroup/IpPermission.pm @@ -0,0 +1,163 @@ +package VM::EC2::SecurityGroup::IpPermission; + +=head1 NAME + +VM::EC2::SecurityGroup::IpPermission - Object describing a firewall rule in an EC2 security group. + +=head1 SYNOPSIS + + $ec2 = VM::EC2->new(...); + $sg = $ec2->describe_security_groups(-name=>'My Group'); + + my @rules = $sg->ipPermissions; + for my $rule (@rules) { # each rule is a VM::EC2::SecurityGroup::IpPermission + $protocol = $rule->ipProtocol; + $fromPort = $rule->fromPort; + $toPort = $rule->toPort; + @ranges = $rule->ipRanges; + @groups = $rule->groups; + } + +=head1 DESCRIPTION + +This object is used to describe the firewall rules defined within an +Amazon EC2 security group. It is returned by the +L object's ipPermissions() and +ipPermissionsEgress() methods (these are also known as +inbound_permissions() and outbound_permissions()). + +=head1 METHODS + +=cut + + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::SecurityGroup::GroupPermission; + +=head2 $protocol = $rule->ipProtocol + +Return the IP protocol for this rule: one of "tcp", "udp" or "icmp". + +=head2 $port = $rule->fromPort + +Start of the port range defined by this rule, or the ICMP type +code. This will be a numeric value, like 80, or -1 to indicate all +ports/codes. + +=head2 $port = $rule->toPort + +End of the port range defined by this rule, or the ICMP type +code. This will be a numeric value, like 80, or -1 to indicate all +ports/codes. + +=cut + +sub valid_fields { + qw(ipProtocol fromPort toPort groups ipRanges); +} + +sub short_name { + my $s = shift; + my $from = $s->ipRanges ? ' FROM CIDR '.join(',',sort $s->ipRanges) + :$s->groups ? ' GRPNAME '.join(',', sort $s->groups) + :''; + sprintf("%s(%s..%s)%s",$s->ipProtocol,$s->fromPort,$s->toPort,$from); +} + +=head2 @ips = $rule->ipRanges + +This method will return a list of the IP addresses that are allowed to +originate or receive traffic, provided that the rule defines IP-based +firewall filtering. + +Each address is a CIDR (classless internet domain routing) address in +the form a.b.c.d/n, such as 10.23.91.0/24 +(http://en.wikipedia.org/wiki/Classless_Inter-Domain_Routing). The +"any" address is in the form 0.0.0.0/0. + +=cut + +sub ipRanges { + my $self = shift; + my $r = $self->SUPER::ipRanges or return; + return map {$_->{cidrIp}} @{$r->{item}}; +} + +=head2 @groups = $rule->groups + +This method will return a list of the security groups that are allowed +to originate or receive traffic from instances assigned to this +security group, provided that the rule defines group-based traffic +filtering. + +Each returned object is a L, +not a L. The reason for this is that these +traffic filtering groups can include security groups owned by other +accounts + +The GroupPermission objects define the methods userId(), groupId() and +groupName(). + +=cut + +sub groups { + my $self = shift; + my $g = $self->SUPER::groups or return; + my @g = map { VM::EC2::SecurityGroup::GroupPermission->new($_,$self->aws) } @{$g->{item}}; + foreach (@g) {$_->ownerId($self->ownerId)}; + return @g; +} + +sub ownerId { + my $self = shift; + my $d = $self->{ownerId}; + $self->{ownerId} = shift if @_; + $d; +} + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the rule +using the following templates: + +TCP port 22 open to any host: + + "tcp(22..22) FROM CIDR 0.0.0.0/0" + +TCP ports 23 through 39 open to the two class C networks 192.168.0.* +and 192.168.1.*: + + "tcp(23..29) FROM CIDR 192.168.0.0/24,192.168.1.0/24" + +UDP port 80 from security group "default" owned by you and the group +named "farmville" owned by user 9999999: + + "udp(80..80) GRPNAME default,9999999/farmville" + +=head1 SEE ALSO + +L +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + + +1; + diff --git a/perl/share/perl/5.10.1/VM/EC2/Snapshot.pm b/perl/share/perl/5.10.1/VM/EC2/Snapshot.pm new file mode 100644 index 0000000..46e6ba4 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Snapshot.pm @@ -0,0 +1,336 @@ +package VM::EC2::Snapshot; + +=head1 NAME + +VM::EC2::Snapshot - Object describing an Amazon EBS snapshot + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @snap = $ec2->describe_snapshots; + for my $snap (@snapshots) { + $id = $snap->snapshotId; + $vol = $snap->volumeId; + $state = $snap->status; + $time = $snap->startTime; + $progress = $snap->progress; + $size = $snap->size; + $description = $snap->description; + $tags = $snap->tags; + } + + # use a snapshot as the root device for a new AMI + $ami = $snap->register_image(-name => 'My new image', + -kernel_id => 'aki-407d9529', + -architecture => 'i386'); + + #create a volume from the snapshot + $vol = $snap->create_volume(-zone => 'us-east-1a'); + +=head1 DESCRIPTION + +This object is used to describe an Amazon EBS snapshot. + +=head1 METHODS + +The following object methods are supported: + + snapshotId -- ID of this snapshot + ownerId -- Owner of this snapshot + volumeId -- ID of the volume snapshot was taken from + status -- Snapshot state, one of "pending", "completed" or "error" + startTime -- Timestamp for when snapshot was begun. + progress -- The progress of the snapshot, in percent. + volumeSize -- Size of the volume, in gigabytes. + description -- Description of the snapshot + ownerAlias -- AWS account alias, such as "self". + tags -- Hashref containing tags associated with this group. + See L. + +In addition, this class provides several convenience functions: + +=head2 $vol = $snap->from_volume + +Returns the VM::EC2::Volume object that this snapshot was originally +derived from. If the original volume no longer exists because it has +been deleted, this will return undef; if -raise_error was passed to +the VM::EC2 object, this will raise an exception. + +=head2 @vol = $snap->to_volumes + +Returns all VM::EC2::Volume objects that were derived from this +snapshot. If no volumes currently exist that satisfy this criteria, +returns an empty list, but will not raise an error. + +=head2 $image = $snap->register_image(%args) + +Register a new AMI using this snapshot as the root device. By default, +the root device will be mapped to /dev/sda1 and will delete on +instance termination. You can modify this behavior and add additional +block devices. + +Arguments: + + -name Name for this image (required) + + -description Description of this image + + -kernel_id Kernel for this image (recommended) + + -ramdisk_id Ramdisk for this image + + -architecture Architecture ("i386" or "x86_64") + + -root_device_name Specify the root device based + on this snapshot (/dev/sda1). + + -root_size Size of the root volume (defaults + to size of the snapshot). + + -root_delete_on_termination True value (default) to delete + the root volume after the instance + terminates. False value to keep the + EBS volume available. + + -block_device_mapping Additional block devices you wish to + incorporate into the image. + + -block_devices Same as above. + +See L for information on the syntax of the +-block_device_mapping argument. If the root device is explicitly +included in the block device mapping argument, then the arguments +specified in -root_size, and -root_delete_on_termination will be +ignored, and the current snapshot will not automatically be used as +the root device. + +The return value is a L. You can call its +current_status() method to poll its availability: + + $snap = $ec2->describe_snapshots('snap-123456'); + $ami = $snap->register_image(-name => 'My new image', + -kernel_id => 'aki-407d9529', + -architecture => 'i386', + -block_devices => '/dev/sdc=ephemeral0' + ) or die $ec2->error_str; + + while ($ami->current_status eq 'pending') { + print "$ami: ",$ami->current_status,"\n" + sleep 30; # takes a long time to register some images + } + + print "$ami is ready to go\n"; + +=head2 $volume = $snap->create_volume(%args) + +Create a new volume from this snapshot. Arguments are: + + -availability_zone -- An availability zone from + describe_availability_zones (required) + + -size -- Size of the volume, in GB (between 1 and 1024). + +If -size is not provided, then the new volume will have the same size as +the snapshot. + +On success, the returned value is a L object. + +=head2 $status = $snap->current_status + +Refreshes the snapshot and returns its current status. + +=head2 $boolean = $snapshot->is_public + +Return true if the snapshot's createVolume permissions allow the "all" +group to create volumes from the snapshot. + +=head2 $boolean = $snapshot->make_public($public) + +Modify the createVolumePermission attribute to allow the "all" group +to create volumes from this snapshot. Provide a true value to make the +snapshot public, a false one to make it private. + +=head2 @user_ids = $image->createVolumePermissions() + +=head2 @user_ids = $image->authorized_users + +Returns a list of user IDs with createVolume permissions for this +snapshot. The result is a list of L +objects, which interpolate as strings corresponding to either the +user ID, or the group named "all." + +The two methods are aliases of each other. + +=head2 $boolean = $image->add_authorized_users($id1,$id2,...) + +=head2 $boolean = $image->remove_authorized_users($id1,$id2,...) + +=head2 $boolean = $image->reset_authorized_users + +These methods add and remove user accounts which have createVolume +permissions for the snapshot. The result code indicates whether the +list of user IDs were successfully added or removed. To add the "all" +group, use make_public(). + +reset_authorized_users() resets the list users authored to create +volumes from this snapshot to empty, effectively granting volume +creation to the owner only. + +See also authorized_users(). + +=head2 $snap->refresh + +Refreshes the snapshot from information provided by AWS. Use before +checking progress or other changeable elements. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +snapshotId. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::Snapshot::CreateVolumePermission; +use Carp 'croak'; + +sub valid_fields { + my $self = shift; + return $self->SUPER::valid_fields, + qw(snapshotId + volumeId + status + startTime + progress + ownerId + volumeSize + description + ownerAlias); +} + +sub primary_id { shift->snapshotId } + +sub from_volume { + my $self = shift; + my $vid = $self->volumeId or return; + # may throw an error if volume no longer exists + return $self->aws->describe_volumes(-volume_id=>$vid); +} + +sub to_volumes { + my $self = shift; + return $self->aws->describe_volumes(-filter=>{'snapshot-id'=>$self->snapshotId}); +} + +sub refresh { + my $self = shift; + my $s = $self->aws->describe_snapshots($self); + %$self = %$s; +} + +sub register_image { + my $self = shift; + my %args = @_; + $args{-name} or croak "register_image(): -name argument required"; + $args{-root_device_name} ||= '/dev/sda1'; + + my $block_devices = $args{-block_devices} || $args{-block_device_mapping} || []; + $block_devices = [$block_devices] unless ref $block_devices && ref $block_devices eq 'ARRAY'; + + # See if the root device is on the block device mapping list. + # If it is not, then create a /dev/sda1 entry for it from this snapshot. + my $rd = $args{-root_device_name}; + unless (grep {/$rd=/} @$block_devices) { + my $root_size = $args{-root_size} || ''; + $args{-root_delete_on_termination} = 1 unless defined $args{-root_delete_on_termination}; + my $root_delete = $args{-root_delete_on_termination} ? 'true' : 'false'; + my $snap_id = $self->snapshotId; + unshift @$block_devices,"$rd=$snap_id:$root_size:$root_delete" + } + + $args{-block_device_mapping} = $block_devices; + + # just cleaning up, not really necessary + delete $args{-root_size}; + delete $args{-root_delete_on_termination}; + + return $self->aws->register_image(%args); +} + +sub create_volume { + my $self = shift; + my @args = @_; + return $self->ec2->create_volume(@args,-snapshot_id=>$self->snapshotId); +} + +sub current_status { + my $self = shift; + $self->refresh; + return $self->status; +} + +sub createVolumePermissions { + my $self = shift; + return map {VM::EC2::Snapshot::CreateVolumePermission->new($_,$self->aws)} + $self->aws->describe_snapshot_attribute($self->snapshotId,'createVolumePermission'); +} + +sub is_public { + my $self = shift; + my @users = $self->createVolumePermissions; + my $count = grep {$_->group eq 'all'} @users; + return $count > 0; +} + +sub make_public { + my $self = shift; + @_ == 1 or croak "Usage: VM::EC2::Snapshot->make_public(\$boolean)"; + my $public = shift; + my @arg = $public ? (-add_group=>'all') : (-remove_group=>'all'); + my $result = $self->aws->modify_snapshot_attribute($self->snapshotId,@arg) or return; + return $result +} + +sub authorized_users { shift->createVolumePermissions } + +sub add_authorized_users { + my $self = shift; + @_ or croak "Usage: VM::EC2::Snapshot->add_authorized_users(\@userIds)"; + return $self->aws->modify_snapshot_attribute($self->snapshotId,-add_user=>\@_); +} + +sub remove_authorized_users { + my $self = shift; + @_ or croak "Usage: VM::EC2::Snapshot->remove_authorized_users(\@userIds)"; + return $self->aws->modify_snapshot_attribute($self->snapshotId,-remove_user=>\@_); +} + +sub reset_authorized_users { + my $self = shift; + $self->aws->reset_snapshot_attribute($self->snapshotId,'createVolumePermission'); +} + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Snapshot/CreateVolumePermission.pm b/perl/share/perl/5.10.1/VM/EC2/Snapshot/CreateVolumePermission.pm new file mode 100644 index 0000000..ddb6930 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Snapshot/CreateVolumePermission.pm @@ -0,0 +1,61 @@ +package VM::EC2::Snapshot::CreateVolumePermission; + +=head1 NAME + +VM::EC2::Snapshot::CreateVolumePermission - Object describing AMI create volume permissions + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $snapshot = $ec2->describe_snapshots('snap-12345'); + @users = $image->createVolumePermissions; + for (@users) { + $group = $_->group; + $user = $_->userId; + } + +=head1 DESCRIPTION + +This object represents an Amazon volume snapshot create volume +permission, and is return by VM::EC2::Snapshot createVolumePermissions(). + +=head1 METHODS + +These object methods are supported: + + group -- Name of a group with launch permissions. Only + valid value is "all" + userId -- Name of a user with launch permissions. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +userId. If the userId is blank, then interpolates as the group. + +=head1 SEE ALSO + +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Image::LaunchPermission'; + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Spot/DatafeedSubscription.pm b/perl/share/perl/5.10.1/VM/EC2/Spot/DatafeedSubscription.pm new file mode 100644 index 0000000..fc8e0ee --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Spot/DatafeedSubscription.pm @@ -0,0 +1,67 @@ +package VM::EC2::Spot::DatafeedSubscription; + +=head1 NAME + +VM::EC2::Spot::DatafeedSubscription - Object describing an Amazon EC2 spot instance datafeed subscription + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + $sub = $ec2->create_spot_datafeed_subscription('myBucket','SPOT:'); + my $owner = $sub->ownerId; + my $bucket = $sub->bucket; + my $prefix = $sub->prefix; + my $state = $sub->state; + my $error = $sub->fault; + +=head1 DESCRIPTION + +This object represents an Amazon EC2 spot instance datafeed subscription, +and is returned by VM::EC2->create_spot_datafeed_subscription() and +VM::EC2->describe_spot_datafeed_subscription(). + +=head1 METHODS + +These object methods are supported: + + ownerId -- ID of the owner of this subscription + bucket -- bucket receiving the subscription files + prefix -- prefix for log files written into the bucket + state -- state of the subscription; one of 'Active' or 'Inactive' + fault -- VM::EC2::Error object describing errors in the + subscription. +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; + +sub valid_fields { + my $self = shift; + return qw(ownerId bucket prefix state fault); +} + +sub fault { + my $self = shift; + my $f = $self->SUPER::fault or return; + return VM::EC2::Error->new($f,$self->ec2); +} +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Spot/InstanceRequest.pm b/perl/share/perl/5.10.1/VM/EC2/Spot/InstanceRequest.pm new file mode 100644 index 0000000..8250e7f --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Spot/InstanceRequest.pm @@ -0,0 +1,150 @@ +package VM::EC2::Spot::InstanceRequest; + +=head1 NAME + +VM::EC2::Spot::InstanceRequest - Object describing an Amazon EC2 spot instance request + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + +=head1 DESCRIPTION + +This object represents an Amazon EC2 spot instance request, which is +returned by VM::EC2->request_spot_instances() and +VM::EC2->describe_spot_instance_requests(). + +=head1 METHODS + +These object methods are supported: + + spotInstanceRequestId -- ID of this spot instance request + + spotPrice -- The maximum hourly price for any spot + instance launched under this request, + in USD. + + type -- The spot instance request type, one of + 'one-time' or 'persistent'. + + state -- The state of this request, one of 'open', + 'closed', 'cancelled' or 'failed'. + + fault -- Fault code for the request, if any, an + instance of VM::EC2::Error. + + validFrom -- Start date and time of the request. + + validUntil -- Date and time that the request expires. + + launchGroup -- Launch group of the instances run under this request. + Instances in the same launch group are launched + and terminated together. + + availabilityZoneGroup -- Availability zone group of the instances + run under this request. Instances in the same + availability zone group will always be launched + into the same availability zone. + + launchSpecification -- Additional information for launching + instances, represented as a VM::EC2::Spot::LaunchSpecificaton + object. + + instanceId -- The instance ID, if an instance has been launched as a + result of this request. + + createTime -- The time and date when the spot instance request was + created. + + productDescription -- The product description associated with this spot + instance request. + +=head1 Convenience Methods + +This class supports the standard tagging interface. In addition it +provides the following convenience method: + +=head2 $instance = $request->instance + +If an instance was launched as a result of this request, the +instance() method will return the corresponding VM::EC2::Instance +object. + +=head2 $state = $request->current_status + +Refreshes the request information and returns its state, such as "open". + +=head2 $request->refresh + +Refreshes the request information. + +=head1 SEE ALSO + +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use VM::EC2::Spot::LaunchSpecification; +use base 'VM::EC2::Generic'; + +sub valid_fields { + my $self = shift; + return qw(spotInstanceRequestId spotPrice type state fault + validFrom validUntil launchGroup availabilityZoneGroup + launchedAvailabilityZone launchSpecification instanceId + createTime productDescription); +} + +sub primary_id { + shift->spotInstanceRequestId; +} + +sub launchSpecification { + my $self = shift; + my $spec = $self->SUPER::launchSpecification; + return VM::EC2::Spot::LaunchSpecification->new($spec,$self->ec2,$self->xmlns,$self->requestId); +} + +sub instance { + my $self = shift; + my $instanceId = $self->instanceId or return; + return $self->ec2->describe_instances($instanceId); +} + +sub fault { + my $self = shift; + my $f = $self->SUPER::fault or return; + return VM::EC2::Error->new($f,$self->ec2); +} + +sub refresh { + my $self = shift; + my $r = $self->ec2->describe_spot_instance_requests($self->spotInstanceRequestId); + %$self = %$r; +} + +sub current_status { + my $self = shift; + $self->refresh; + return $self->state; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Spot/LaunchSpecification.pm b/perl/share/perl/5.10.1/VM/EC2/Spot/LaunchSpecification.pm new file mode 100644 index 0000000..2811486 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Spot/LaunchSpecification.pm @@ -0,0 +1,33 @@ +package VM::EC2::Spot::LaunchSpecification; +use strict; +use VM::EC2::Group; +use base 'VM::EC2::Generic'; + +sub valid_fields { + return qw(imageId keyName groupSet addressingType instanceType + placement kernelId ramdiskId blockDeviceMapping monitoring + subnetId); +} + +sub blockDeviceMapping { + my $self = shift; + my $mapping = $self->SUPER::blockDeviceMapping or return; + my @mapping = map { VM::EC2::BlockDevice::Mapping->new($_,$self->ec2)} @{$mapping->{item}}; + foreach (@mapping) { $_->instance($self) } + return @mapping; +} + +sub monitoring { + my $self = shift; + my $monitoring = $self->SUPER::monitoring or return; + return $monitoring->{enabled} eq 'true'; +} + +sub groupSet { + my $self = shift; + my $groupSet = $self->SUPER::groupSet; + return map {VM::EC2::Group->new($_,$self->aws,$self->xmlns,$self->requestId)} + @{$groupSet->{item}}; +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Spot/PriceHistory.pm b/perl/share/perl/5.10.1/VM/EC2/Spot/PriceHistory.pm new file mode 100644 index 0000000..b42bbc6 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Spot/PriceHistory.pm @@ -0,0 +1,69 @@ +package VM::EC2::Spot::PriceHistory; +use strict; +use base 'VM::EC2::Generic'; + +=head1 NAME + +VM::EC2::Spot::PriceHistory - Object describing an Amazon EC2 spot instance price history record + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + + my @history = $ec2->describe_spot_price_history(-start_time => '2011-09-01T00:00:00', + -end_time => '2011-09-05T00:00:00', + -availability_zone => 'us-east-1a', + -instance_type => 'm1.small', + -filter => {'product-description'=>'*Linux*'}, + } or die $ec2->error_str; + for my $h (@history) { + print join("\t",$h->timestamp, + $h->spot_price, + $h->instanceType, + $h->productDescription, + $h->availability_zone),"\n"; + } + +=head1 DESCRIPTION + +This object represents an Amazon EC2 spot instance price history record, +and is returned by VM::EC2->describe_spot_price_history(). + +=head1 METHODS + +These object methods are supported: + + instanceType -- Instance type, e.g. 'm1.small' + productDescription -- Product description, e.g. "windows" + spotPrice -- Price, in dollars per run-hour. + timestamp -- Timestamp of data point, in format yyyy-mm-ddThh:mm:ss.000Z + availabilityZone -- Availability zone of spot instance. + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +sub valid_fields { + my $self = shift; + return qw(instanceType productDescription spotPrice timestamp availabilityZone); +} + + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Tag.pm b/perl/share/perl/5.10.1/VM/EC2/Tag.pm new file mode 100644 index 0000000..30a420f --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Tag.pm @@ -0,0 +1,80 @@ +package VM::EC2::Tag; + +=head1 NAME + +VM::EC2::Tag -- Object describing a tagged Amazon EC2 resource + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @tags = $ec2->describe_tags(-filter=> {'resource-type'=>'volume'}); + for my $t (@tags) { + $id = $t->resourceId; + $type = $t->resourceType; + $key = $t->key; + $value = $t->value; + } + +=head1 DESCRIPTION + +This object is used to describe an Amazon EC2 tag. Each object +contains information about the resource it is tagging, the tag key, +and the tag value. Tags are returned by the VM::EC2->describe_tags() +method. + +In most cases you will not want to work with this object directly, but +instead read tags by calling a resource object's tags() method, which +returns a hash of key value pairs, or specify particular tag values as +one of the filters in a describe_*() call. + +=head1 METHODS + +The following object methods are supported: + + resourceId -- The ID of the resource being tagged. + resourceType -- The type of the resource being tagged e.g. "image" + key -- The tag key. + value -- The tag value. + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +resourceId. + +=head1 SEE ALSO + +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + + +use strict; +use base 'VM::EC2::Generic'; + +use overload + '""' => sub { + my $self = shift; + return $self->resourceId}, + fallback => 1; + +sub valid_fields { + my $self = shift; + return qw(resourceId resourceType key value); +} + +1; diff --git a/perl/share/perl/5.10.1/VM/EC2/Volume.pm b/perl/share/perl/5.10.1/VM/EC2/Volume.pm new file mode 100644 index 0000000..3110656 --- /dev/null +++ b/perl/share/perl/5.10.1/VM/EC2/Volume.pm @@ -0,0 +1,258 @@ +package VM::EC2::Volume; + +=head1 NAME + +VM::EC2::Volume - Object describing an Amazon EBS volume + +=head1 SYNOPSIS + + use VM::EC2; + + $ec2 = VM::EC2->new(...); + @vol = $ec2->describe_volumes; + for my $vol (@vols) { + $id = $vol->volumeId; + $size = $vol->size; + $snap = $vol->snapshotId; + $zone = $vol->availabilityZone; + $status = $vol->status; + $ctime = $vol->createTime; + @attachments = $vol->attachments; + $attachment = $vol->attachment; + $origin = $vol->from_snapshot; + @snapshots = $vol->to_snapshots; + } + $vols[0]->attach('i-12345','/dev/sdg1'); + $vols[0]->deleteOnTermination('true'); + $vols[0]->detach; + $vols[0]->create_snapshot('automatic snapshot') + +=head1 DESCRIPTION + +This object is used to describe an Amazon EBS volume. It is returned +by VM::EC2->describe_volumes(). + +=head1 METHODS + +The following object methods are supported: + + volumeId -- ID of this volume. + size -- Size of this volume (in GB). + snapshotId -- ID of snapshot this + availabilityZone -- Availability zone in which this volume resides. + status -- Volume state, one of "creating", "available", + "in-use", "deleting", "deleted", "error" + createTime -- Timestamp for when volume was created. + tags -- Hashref containing tags associated with this group. + See L. + +In addition, this class provides several convenience functions: + +=head2 $attachment = $vol->attachment + +=head2 @attachments = $vol->attachments + +The attachment() method returns a +VM::EC2::BlockDevice::Attachment object describing the +attachment of this volume to an instance. If the volume is unused, +then this returns undef. + +The attachments() method is similar, except that it returns a list of +the attachments. Currently an EBS volume can only be attached to one +instance at a time, but the Amazon call syntax supports multiple +attachments and this method is provided for future compatibility. + +=head2 $attachment = $vol->attach($instance,$device) + +=head2 $attachment = $vol->attach(-instance_id=>$instance,-device=>$device) + +Attach this volume to an instance using virtual device $device. Both +arguments are required. The result is a +VM::EC2::BlockDevice::Attachment object which you can monitor by +calling current_status(): + + my $a = $volume->attach('i-12345','/dev/sdg'); + while ($a->current_status ne 'attached') { + sleep 2; + } + print "volume is ready to go\n"; + +=head2 $attachment = $volume->detach() + +=head2 $attachment = $volume->detach(-instance_id=>$instance_id, + -device=>$device, + -force=>$force); + +Detaches this volume. With no arguments, will detach the volume from +whatever instance it is currently attached to. Provide -instance_id +and/or -device as a check that you are detaching the volume from the +expected instance and device. + +Optional arguments: + + -instance_id -- ID of the instance to detach from. + -device -- How the device is exposed to the instance. + -force -- Force detachment, even if previous attempts were + unsuccessful. + +The result is a VM::EC2::BlockDevice::Attachment object which +you can monitor by calling current_status(): + + my $a = $volume->detach; + while ($a->current_status ne 'detached') { + sleep 2; + } + print "volume is ready to go\n"; + +=head2 $boolean = $vol->deleteOnTermination([$boolean]) + +Get or set the deleteOnTermination flag for attached volumes. If the volume +is unattached, then this causes a fatal error. Called with no arguments, this +method returns the current state of the deleteOnTermination flag for the +volume's attachment. Called with a true/false argument, the method sets the +flag by calling modify_instance_attributes() on the corresponding instance +and returns true if successful. + +=head2 $snap = $vol->from_snapshot + +Returns the VM::EC2::Snapshot object that this volume was +originally derived from. It will return undef if the resource no +longer exists, or if the volume was created from scratch. + +=head2 @snap = $vol->to_snapshots + +If this volume has been used to create one or more snapshots, this +method will return them as a list of VM::EC2::Snapshot objects. + +=head2 $snapshot = $vol->create_snapshot('Description') + +Create a snapshot of the volume and return a VM::EC2::Snapshot +object. To ensure a consistent snapshot, you should unmount the volume +before snapshotting it. The optional argument allows you to add a description to the snapshot. + +Here is an example: + + $s = $volume->create_snapshot("Backed up at ".localtime); + while ($s->current_status eq 'pending') { + print "Progress: ",$s->progress,"% done\n"; + } + print "Snapshot status: ",$s->current_status,"\n"; + +=head2 $status = $vol->current_status + +This returns the up-to-date status of the volume. It works by calling +refresh() and then returning status(). + +=head1 STRING OVERLOADING + +When used in a string context, this object will interpolate the +volumeId. + +=head1 SEE ALSO + +L +L +L +L +L + +=head1 AUTHOR + +Lincoln Stein Elincoln.stein@gmail.comE. + +Copyright (c) 2011 Ontario Institute for Cancer Research + +This package and its accompanying libraries is free software; you can +redistribute it and/or modify it under the terms of the GPL (either +version 1, or at your option, any later version) or the Artistic +License 2.0. Refer to LICENSE for the full license text. In addition, +please see DISCLAIMER.txt for disclaimers of warranty. + +=cut + +use strict; +use base 'VM::EC2::Generic'; +use VM::EC2::BlockDevice::Attachment; +use Carp 'croak'; + +sub valid_fields { + my $self = shift; + return qw(volumeId size snapshotId availabilityZone status + createTime attachmentSet tagSet); +} + +sub primary_id {shift->volumeId} + +sub attachment { + my $self = shift; + my $attachments = $self->attachmentSet or return; + my $id = $attachments->{item}[0] or return; + return VM::EC2::BlockDevice::Attachment->new($id,$self->aws) +} + +sub attachments { + my $self = shift; + my $attachments = $self->attachmentSet or return; + my $items = $self->attachmentSet->{item} or return; + my @a = map {VM::EC2::BlockDevice::Attachment->new($_,$self->aws)} @$items; + return @a; +} + +sub deleteOnTermination { + my $self = shift; + $self->refresh; + my $attachment = $self->attachment or croak "$self is not attached"; + return $attachment->deleteOnTermination(@_); +} + +sub from_snapshot { + my $self = shift; + my $sid = $self->snapshotId or return; + return $self->aws->describe_snapshots(-filter=>{'snapshot-id' => $sid}); +} + +sub to_snapshots { + my $self = shift; + return $self->aws->describe_snapshots(-filter=>{'volume-id' => $self->volumeId}); +} + +sub create_snapshot { + my $self = shift; + my $description = shift; + my @param = (-volume_id=>$self->volumeId); + push @param,(-description=>$description) if defined $description; + return $self->aws->create_snapshot(@param); +} + +sub attach { + my $self = shift; + my %args; + if (@_==2 && $_[0] !~ /^-/) { + @args{'-instance_id','-device'} = @_; + } else { + %args = @_; + } + $args{-instance_id} && $args{-device} + or croak "usage: \$vol->attach(\$instance_id,\$device)"; + $args{-volume_id} = $self->volumeId; + return $self->aws->attach_volume(%args); +} + +sub detach { + my $self = shift; + return $self->aws->detach_volume(-volume_id=>$self->volumeId,@_); +} + +sub current_status { + my $self = shift; + $self->refresh; + $self->status; +} + +sub refresh { + my $self = shift; + my $v = $self->aws->describe_volumes($self->volumeId); + %$self = %$v; +} + +1; diff --git a/release/metadata_fixed.csv b/release/metadata_fixed.csv index f51b67b..f190cb9 100644 --- a/release/metadata_fixed.csv +++ b/release/metadata_fixed.csv @@ -37,11 +37,11 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 27 27_A1_Input.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_27.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 27 27_ss1_suHw.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_27.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites 34 34_2008-03-26.1.gff.gz D.melanogaster/mRNA/RACE/gene-model_gff3 5-prime-UTR:Developmental-Stage=Mixed-Embryos-0-24-hr#Strain=Y-cn-bw-sp:RACE:Rep-1::Dmel_r5.32:modENCODE_34.gff3.gz gene-model_gff3 D. melanogaster mRNA RACE 5-prime-UTR Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -40 40_Dro2_AS_1182-4H_568.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_40.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -40 40_Dro2_AS_1182-4H_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_40.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -40 40_Dro2_AS_1182-4H_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_40.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -40 40_1182-4H.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_40.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -40 40_Dro2_AS_1182-4H_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_40.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +40 40_Dro2_AS_1182-4H_568.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_40.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +40 40_Dro2_AS_1182-4H_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_40.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +40 40_Dro2_AS_1182-4H_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_40.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +40 40_1182-4H.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_40.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +40 40_Dro2_AS_1182-4H_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_40.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling 43 43_HTZIN2_I-IV_86700_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HTZ-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3:Cele_WS220:modENCODE_43:N2_I-IV_86700.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HTZ-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure 43 43_HTZIP5_I-IV_89335_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HTZ-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3:Cele_WS220:modENCODE_43:P5_I-IV_89335.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HTZ-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure 43 43_HTZIP4_IV-X_89327_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HTZ-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5:Cele_WS220:modENCODE_43:V-X_89327.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HTZ-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Chromatin structure @@ -63,36 +63,36 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 43 43_HTZIP5_dyeswap_WS220.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HTZ-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_43:5_dyeswap.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HTZ-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure 43 43_HTZIN3_I-IV_86699_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HTZ-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3:Cele_WS220:modENCODE_43:IV_86699.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HTZ-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure 43 43_HTZIN5_IV-X_89334_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HTZ-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5:Cele_WS220:modENCODE_43:N5_IV-X_89334.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HTZ-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure -44 44_RNAPIIIP2_98337_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_44:8337.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIN2_97978_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_44:7978.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIN2_98337_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_44:8337.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIP2_dyeswap_WS220.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_44.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIP2_97978_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_44:7978.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIN1_89324_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_44:89324.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIP1_WS220.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_44.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIP1_98099_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_44:98099.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIP1_89324_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_44:89324.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -44 44_RNAPIIIN1_98099_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_44:98099.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -48 48_Dro2_AS_CME-L1_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_48.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -48 48_Dro2_AS_CME-L1_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_48.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -48 48_Dro2_AS_CME-L1_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_48.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -48 48_Dro2_AS_CME-L1_558.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_48.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -48 48_CME-L1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_48.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -49 49_Dro2_AS_CME-W1-CL8_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_49.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -49 49_CME-W1-Cl.8+.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_49.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -49 49_Dro2_AS_CME-W1-Cl.8+_577.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_49.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -49 49_Dro2_AS_CME-W1-CL8_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_49.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -49 49_Dro2_AS_CME-W1-CL8_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_49.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -50 50_Dro2_AS_GM2_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_50.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -50 50_Dro2_AS_GM2_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_50.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -50 50_Dro2_AS_GM2_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_50.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -50 50_GM2.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_50.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -50 50_Dro2_AS_GM2_564.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_50.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -51 51_Dro2_AS_Kc167_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_51.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -51 51_Kc167.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_51.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -51 51_Dro2_AS_Kc167_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_51.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -51 51_Dro2_AS_Kc167_563.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_51.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -51 51_Dro2_AS_Kc167_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_51.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +44 44_RNAPIIIP2_98337_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_44:8337.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIN2_97978_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_44:7978.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIN2_98337_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_44:8337.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIP2_dyeswap_WS220.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_44.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIP2_97978_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_44:7978.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIN1_89324_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_44:89324.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIP1_WS220.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_44.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIP1_98099_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_44:98099.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIP1_89324_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_44:89324.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +44 44_RNAPIIIN1_98099_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_44:98099.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +48 48_Dro2_AS_CME-L1_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_48.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +48 48_Dro2_AS_CME-L1_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_48.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. 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RNA expression profiling +48 48_CME-L1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_48.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +49 49_Dro2_AS_CME-W1-CL8_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_49.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. 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RNA expression profiling +49 49_Dro2_AS_CME-W1-CL8_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_49.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +49 49_Dro2_AS_CME-W1-CL8_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_49.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +50 50_Dro2_AS_GM2_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_50.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +50 50_Dro2_AS_GM2_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_50.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +50 50_Dro2_AS_GM2_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_50.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +50 50_GM2.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_50.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +50 50_Dro2_AS_GM2_564.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_50.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +51 51_Dro2_AS_Kc167_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_51.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +51 51_Kc167.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_51.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +51 51_Dro2_AS_Kc167_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_51.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +51 51_Dro2_AS_Kc167_563.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_51.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +51 51_Dro2_AS_Kc167_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_51.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling 52 52_Dro2_AS_ML-DmBG1c1_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_52.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling 52 52_Dro2_AS_ML-DmBG1-c1_581.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_52.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 52 52_ML-DmBG1-c1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_52.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling @@ -103,81 +103,81 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 53 53_Dro2_AS_MLDmBG3-c2_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_53.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling 53 53_Dro2_AS_MLDmBG3-c2_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_53.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling 53 53_Dro2_AS_ML-DmBG3-c2_732.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_53.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -54 54_Dro2_AS_ML-DmD11_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_54.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -54 54_Dro2_AS_ML-DmD11_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_54.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -54 54_Dro2_AS_ML-DmD11_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_54.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -54 54_Dro2_AS_ML-DmD11_560.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_54.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -54 54_ML-DmD11.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_54.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -55 55_Dro2_AS_ML-DmD17c3_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_55.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -55 55_ML-DmD17-c3.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_55.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -55 55_Dro2_AS_ML-DmD17c3_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_55.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -55 55_Dro2_AS_ML-DmD17c3_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_55.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -55 55_Dro2_AS_ML-DmD17-c3_571.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_55.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -56 56_ML-DmD20-c2.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_56.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -56 56_Dro2_AS_ML-DmD20c2_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_56.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -56 56_Dro2_AS_ML-DmD20-c2_561.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_56.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -56 56_Dro2_AS_ML-DmD20c2_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_56.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -56 56_Dro2_AS_ML-DmD20c2_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_56.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -57 57_Dro2_AS_ML-DmD20-c5_562.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_57.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -57 57_ML-DmD20-c5.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_57.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -57 57_Dro2_AS_ML-DmD20c5_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_57.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -57 57_Dro2_AS_ML-DmD20c5_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_57.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -57 57_Dro2_AS_ML-DmD20c5_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_57.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -58 58_Dro2_AS_ML-DmD21_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_58.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -58 58_Dro2_AS_ML-DmD21_582.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_58.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -58 58_Dro2_AS_ML-DmD21_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_58.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -58 58_Dro2_AS_ML-DmD21_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_58.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -58 58_ML-DmD21.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_58.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -59 59_Dro2_AS_ML-DmD32_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_59.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -59 59_ML-DmD32.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_59.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -59 59_Dro2_AS_ML-DmD32_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_59.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -59 59_Dro2_AS_ML-DmD32_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_59.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -59 59_Dro2_AS_ML-DmD32_570.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_59.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -60 60_ML-DmD4-c1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_60.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -60 60_Dro2_AS_ML-DmD4-c1_687.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_60.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -60 60_Dro2_AS_MLDmD4-c1_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_60.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -60 60_Dro2_AS_MLDmD4-c1_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_60.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -60 60_Dro2_AS_MLDmD4-c1_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_60.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -61 61_ML-DmD8.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_61.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -61 61_Dro2_AS_ML-DmD8_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_61.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -61 61_Dro2_AS_ML-DmD8_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_61.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -61 61_Dro2_AS_ML-DmD8_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_61.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -61 61_Dro2_AS_ML-DmD8_572.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_61.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -62 62_Dro2_AS_ML-DmD9_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_62.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -62 62_Dro2_AS_ML-DmD9_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_62.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -62 62_Dro2_AS_ML-DmD9_580.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_62.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -62 62_ML-DmD9.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_62.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -62 62_Dro2_AS_ML-DmD9_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_62.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -63 63_S1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_63.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -63 63_Dro2_AS_S1_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_63.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -63 63_Dro2_AS_S1_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_63.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -63 63_Dro2_AS_S1_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_63.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -63 63_Dro2_AS_S1_567.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_63.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -64 64_S2-DRSC.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_64.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -64 64_Dro2_AS_S2-DRSC_565.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_64.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -64 64_Dro2_AS_S2-DRSC_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_64.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -64 64_Dro2_AS_S2-DRSC_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_64.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -64 64_Dro2_AS_S2-DRSC_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_64.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -65 65_Dro2_AS_S2R+_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_65.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -65 65_Dro2_AS_S2R+_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_65.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -65 65_Dro2_AS_S2R+_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_65.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -65 65_Dro2_AS_S2R+_566.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_65.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -65 65_S2R+.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_65.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -66 66_Dro2_AS_S3_757.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_66.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -66 66_Dro2_AS_S3_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_66.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -66 66_S3.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_66.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -66 66_Dro2_AS_S3_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_66.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -66 66_Dro2_AS_S3_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_66.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -67 67_Sg4.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_67.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -67 67_Dro2_AS_Sg4_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_67.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -67 67_Dro2_AS_Sg4_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_67.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -67 67_Dro2_AS_Sg4_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_67.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -67 67_Dro2_AS_Sg4_559.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_67.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -69 69_Dro2_AS_ML-DmD16c3_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_69.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -69 69_Dro2_AS_ML-DmD16c3_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_69.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -69 69_Dro2_AS_ML-DmD16-c3_569.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_69.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -69 69_ML-DmD16-c3.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_69.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -69 69_Dro2_AS_ML-DmD16c3_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_69.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +54 54_Dro2_AS_ML-DmD11_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_54.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +54 54_Dro2_AS_ML-DmD11_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_54.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +54 54_Dro2_AS_ML-DmD11_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_54.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +54 54_Dro2_AS_ML-DmD11_560.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_54.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +54 54_ML-DmD11.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_54.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +55 55_Dro2_AS_ML-DmD17c3_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_55.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +55 55_ML-DmD17-c3.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_55.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +55 55_Dro2_AS_ML-DmD17c3_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_55.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +55 55_Dro2_AS_ML-DmD17c3_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_55.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +55 55_Dro2_AS_ML-DmD17-c3_571.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_55.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +56 56_ML-DmD20-c2.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_56.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +56 56_Dro2_AS_ML-DmD20c2_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_56.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +56 56_Dro2_AS_ML-DmD20-c2_561.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_56.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +56 56_Dro2_AS_ML-DmD20c2_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_56.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +56 56_Dro2_AS_ML-DmD20c2_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_56.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +57 57_Dro2_AS_ML-DmD20-c5_562.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_57.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +57 57_ML-DmD20-c5.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_57.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +57 57_Dro2_AS_ML-DmD20c5_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_57.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +57 57_Dro2_AS_ML-DmD20c5_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_57.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +57 57_Dro2_AS_ML-DmD20c5_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_57.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +58 58_Dro2_AS_ML-DmD21_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_58.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +58 58_Dro2_AS_ML-DmD21_582.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_58.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +58 58_Dro2_AS_ML-DmD21_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_58.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +58 58_Dro2_AS_ML-DmD21_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_58.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +58 58_ML-DmD21.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_58.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +59 59_Dro2_AS_ML-DmD32_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_59.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +59 59_ML-DmD32.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_59.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +59 59_Dro2_AS_ML-DmD32_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_59.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +59 59_Dro2_AS_ML-DmD32_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_59.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +59 59_Dro2_AS_ML-DmD32_570.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_59.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +60 60_ML-DmD4-c1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_60.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +60 60_Dro2_AS_ML-DmD4-c1_687.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_60.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +60 60_Dro2_AS_MLDmD4-c1_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_60.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +60 60_Dro2_AS_MLDmD4-c1_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_60.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +60 60_Dro2_AS_MLDmD4-c1_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_60.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +61 61_ML-DmD8.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_61.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +61 61_Dro2_AS_ML-DmD8_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_61.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +61 61_Dro2_AS_ML-DmD8_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_61.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +61 61_Dro2_AS_ML-DmD8_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_61.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +61 61_Dro2_AS_ML-DmD8_572.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_61.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +62 62_Dro2_AS_ML-DmD9_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_62.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +62 62_Dro2_AS_ML-DmD9_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_62.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +62 62_Dro2_AS_ML-DmD9_580.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_62.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +62 62_ML-DmD9.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_62.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +62 62_Dro2_AS_ML-DmD9_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_62.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +63 63_S1.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_63.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +63 63_Dro2_AS_S1_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_63.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +63 63_Dro2_AS_S1_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_63.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +63 63_Dro2_AS_S1_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_63.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +63 63_Dro2_AS_S1_567.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_63.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +64 64_S2-DRSC.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_64.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +64 64_Dro2_AS_S2-DRSC_565.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_64.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +64 64_Dro2_AS_S2-DRSC_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_64.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +64 64_Dro2_AS_S2-DRSC_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_64.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +64 64_Dro2_AS_S2-DRSC_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_64.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +65 65_Dro2_AS_S2R+_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_65.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +65 65_Dro2_AS_S2R+_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_65.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +65 65_Dro2_AS_S2R+_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_65.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +65 65_Dro2_AS_S2R+_566.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_65.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +65 65_S2R+.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_65.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +66 66_Dro2_AS_S3_757.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_66.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +66 66_Dro2_AS_S3_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_66.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +66 66_S3.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_66.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +66 66_Dro2_AS_S3_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_66.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +66 66_Dro2_AS_S3_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_66.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +67 67_Sg4.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_67.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +67 67_Dro2_AS_Sg4_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_67.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +67 67_Dro2_AS_Sg4_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_67.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +67 67_Dro2_AS_Sg4_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_67.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +67 67_Dro2_AS_Sg4_559.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_67.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +69 69_Dro2_AS_ML-DmD16c3_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_69.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +69 69_Dro2_AS_ML-DmD16c3_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_69.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +69 69_Dro2_AS_ML-DmD16-c3_569.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_69.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +69 69_ML-DmD16-c3.bed.gff3.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_69.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +69 69_Dro2_AS_ML-DmD16c3_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_69.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 90 90_JL00001_DPY27_N2_MXemb_3_86667_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_90:7.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 90 90_JL00001_DPY27_N2_MXemb_3_86662_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_90:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 90 90_JL00001_DPY27_N2_MXemb_1_86692_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_90:92.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -204,36 +204,36 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 94 94_Dro2_AS_Dm_L2_larvae_659.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_94.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 94 94_Dro2_AS_Dm_L2_larvae_659.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_94.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 94 94_Dro2_AS_Dm_L2_larvae_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_94.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -95 95_Dro2_AS_Dm_WPP_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_95.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -95 95_Dro2_AS_Dm_WPP_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_95.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -95 95_Dro2_AS_Dm_WPP_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_95.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -95 95_Dro2_AS_Dm_WPP_RW_788.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_95.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -95 95_Dro2_AS_Dm_WPP_RW_788.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_95.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -96 96_Dro2_AS_DroAdF-Ecl+1day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_96.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -96 96_Dro2_AS_DroAdF-Ecl+1day_754.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_96.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -96 96_Dro2_AS_DroAdF-Ecl+1day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_96.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -96 96_Dro2_AS_DroAdF-Ecl+1day_754.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_96.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -96 96_Dro2_AS_DroAdF-Ecl+1day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_96.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -97 97_Dro2_AS_DroAdF-Ecl+5day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_97.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -97 97_Dro2_AS_DroAdF-Ecl+5day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_97.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -97 97_Dro2_AS_DroAdF-Ecl+5day_755.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_97.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -97 97_Dro2_AS_DroAdF-Ecl+5day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_97.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -97 97_Dro2_AS_DroAdF-Ecl+5day_755.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_97.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -98 98_Dro2_AS_DroAdM-Ecl+1day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_98.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -98 98_Dro2_AS_DroAdM-Ecl+1day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_98.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -98 98_Dro2_AS_DroAdM-Ecl+1day_730.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_98.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -98 98_Dro2_AS_DroAdM-Ecl+1day_730.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_98.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -98 98_Dro2_AS_DroAdM-Ecl+1day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_98.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -99 99_Dro2_AS_DroAdM-Ecl+5day_756.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_99.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -99 99_Dro2_AS_DroAdM-Ecl+5day_756.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_99.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -99 99_Dro2_AS_DroAdM-Ecl+5day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_99.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -99 99_Dro2_AS_DroAdM-Ecl+5day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_99.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -99 99_Dro2_AS_DroAdM-Ecl+5day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_99.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -100 100_Dro2_AS_L3-larvae-dark-blue_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_100.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -100 100_Dro2_AS_L3-larvae-dark-blue_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_100.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -100 100_Dro2_AS_L3-larvae-dark-blue_RW_789.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_100.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -100 100_Dro2_AS_L3-larvae-dark-blue_RW_789.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_100.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -100 100_Dro2_AS_L3-larvae-dark-blue_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_100.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +95 95_Dro2_AS_Dm_WPP_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_95.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +95 95_Dro2_AS_Dm_WPP_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_95.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +95 95_Dro2_AS_Dm_WPP_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_95.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +95 95_Dro2_AS_Dm_WPP_RW_788.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_95.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +95 95_Dro2_AS_Dm_WPP_RW_788.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_95.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +96 96_Dro2_AS_DroAdF-Ecl+1day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_96.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +96 96_Dro2_AS_DroAdF-Ecl+1day_754.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_96.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +96 96_Dro2_AS_DroAdF-Ecl+1day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_96.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +96 96_Dro2_AS_DroAdF-Ecl+1day_754.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_96.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +96 96_Dro2_AS_DroAdF-Ecl+1day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_96.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +97 97_Dro2_AS_DroAdF-Ecl+5day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_97.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +97 97_Dro2_AS_DroAdF-Ecl+5day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_97.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +97 97_Dro2_AS_DroAdF-Ecl+5day_755.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_97.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +97 97_Dro2_AS_DroAdF-Ecl+5day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_97.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +97 97_Dro2_AS_DroAdF-Ecl+5day_755.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_97.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +98 98_Dro2_AS_DroAdM-Ecl+1day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_98.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +98 98_Dro2_AS_DroAdM-Ecl+1day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_98.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +98 98_Dro2_AS_DroAdM-Ecl+1day_730.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_98.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +98 98_Dro2_AS_DroAdM-Ecl+1day_730.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_98.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +98 98_Dro2_AS_DroAdM-Ecl+1day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_98.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +99 99_Dro2_AS_DroAdM-Ecl+5day_756.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_99.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +99 99_Dro2_AS_DroAdM-Ecl+5day_756.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_99.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +99 99_Dro2_AS_DroAdM-Ecl+5day_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_99.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +99 99_Dro2_AS_DroAdM-Ecl+5day_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_99.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +99 99_Dro2_AS_DroAdM-Ecl+5day_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_99.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +100 100_Dro2_AS_L3-larvae-dark-blue_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_100.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +100 100_Dro2_AS_L3-larvae-dark-blue_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_100.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +100 100_Dro2_AS_L3-larvae-dark-blue_RW_789.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_100.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +100 100_Dro2_AS_L3-larvae-dark-blue_RW_789.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_100.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +100 100_Dro2_AS_L3-larvae-dark-blue_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_100.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling 101 101_Dro2_AS_Dm_emb_2h_578.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_101.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 101 101_Dro2_AS_Dm_emb_2h_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_101.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling 101 101_Dro2_AS_Dm_emb_2h_578.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_101.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling @@ -357,31 +357,31 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 127 127_JL00002_SDC3_N2_MXemb_3_86669_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-3:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_127:69.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-3 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 127 127_JL00002_SDC3_N2_MXemb_3_86669_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-3:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_127:69.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-3 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 127 127_JL00002_SDC3_N2_MXemb_2_97228_IP_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-3:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_127:972.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-3 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -139 139_Dro2_AS_mbn2_791.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_139.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -139 139_Dro2_AS_mbn2_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_139.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -139 139_Dro2_AS_mbn2_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_139.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -139 139_Dro2_AS_mbn2_791.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_139.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -139 139_Dro2_AS_mbn2_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_139.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -140 140_Dro2_AS_CME-W2_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_140.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -140 140_Dro2_AS_CME-W2_786.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_140.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -140 140_Dro2_AS_CME-W2_786.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_140.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -140 140_Dro2_AS_CME-W2_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_140.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -140 140_Dro2_AS_CME-W2_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_140.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -174 174_ABAB5408_4H8_N2_MXEMB_1_4441902_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_174:4441902.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_1_113163_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_174:113163.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2_12367902_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_174:679.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_174.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2_12365702_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_174:657.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2_12374702_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_174:747.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_1_4441902_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_174:4441902.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_1_4440202_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_174:4440202.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_1_113163_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_174:113163.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2_12365702_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_174:657.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2_12367902_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_174:679.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_2_12374702_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_174:747.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_peaks.gff.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_174.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_174.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -174 174_ABAB5408_4H8_N2_MXEMB_1_4440202_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_174:4440202.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +139 139_Dro2_AS_mbn2_791.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_139.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +139 139_Dro2_AS_mbn2_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_139.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +139 139_Dro2_AS_mbn2_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_139.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +139 139_Dro2_AS_mbn2_791.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_139.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +139 139_Dro2_AS_mbn2_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_139.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +140 140_Dro2_AS_CME-W2_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_140.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +140 140_Dro2_AS_CME-W2_786.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_140.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +140 140_Dro2_AS_CME-W2_786.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_140.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +140 140_Dro2_AS_CME-W2_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_140.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +140 140_Dro2_AS_CME-W2_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_140.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +174 174_ABAB5408_4H8_N2_MXEMB_1_4441902_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_174:4441902.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_1_113163_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_174:113163.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2_12367902_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_174:679.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_174.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2_12365702_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_174:657.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2_12374702_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_174:747.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_1_4441902_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_174:4441902.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_1_4440202_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_174:4440202.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_1_113163_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_174:113163.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2_12365702_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_174:657.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2_12367902_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_174:679.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_2_12374702_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_174:747.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_peaks.gff.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_174.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_174.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +174 174_ABAB5408_4H8_N2_MXEMB_1_4440202_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_174:4440202.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 175 175_AB9050_H3K36me3_N2_L3_2LM_9577902_IP_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_175:2LM_9577902_IP.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 175 175_AB9050_H3K36ME3_N2_L3_3LM.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_175:3.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 175 175_AB9050_H3K36ME3_N2_L3_2LM.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_175:2.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -461,16 +461,16 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 195 195_SGF3165_FLAG_MES4FLAG_EEMB_2_OID8652_129946A03_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair FLAG:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_195:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip FLAG Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 195 195_SGF3165_FLAG_MES4FLAG_EEMB_1_OID8652_129945A03_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair FLAG:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_195:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip FLAG Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 195 195_SGF3165_FLAG_MES4FLAG_EEMB_2_OID8652_129946A02_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair FLAG:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_195:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip FLAG Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -201 201_59.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:59.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_201:148.pirrota_303_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_101.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:101.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_201:58.pirrota_208_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_317.pirrota_496_S14_H4Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_201:317.pirrota_496_S14_H4Ac.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_59.pirrota_209_S12_H4AcTetra.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_201:59.pirrota_209_S12_H4AcTetra.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_repset.3211344.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_317.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:317.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_101.pirrota_239_S12_H4Actetra.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_201:101.pirrota_239_S12_H4Actetra.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -201 201_repset.3211344.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:repset.3211344.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_59.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:59.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_201:148.pirrota_303_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_101.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:101.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_201:58.pirrota_208_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_317.pirrota_496_S14_H4Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_201:317.pirrota_496_S14_H4Ac.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_59.pirrota_209_S12_H4AcTetra.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_201:59.pirrota_209_S12_H4AcTetra.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_repset.3211344.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_317.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:317.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_101.pirrota_239_S12_H4Actetra.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_201:101.pirrota_239_S12_H4Actetra.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +201 201_repset.3211344.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4acTetra:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_201:repset.3211344.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4acTetra Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 202 202_NA_MES4FLAG_EEMB_2_OID9534_136056A03_01_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_202:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 202 202_NA_MES4FLAG_EEMB_2_OID9534_136056A02_01_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_202:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 202 202_NA_MES4FLAG_EEMB_2_OID9534_136056A02_01_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_202:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -485,24 +485,24 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 202 202_NA_MES4FLAG_EEMB_1_OID8652_129947A01_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_202:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 202 202_NA_MES4FLAG_EEMB_2_OID9534_136056A01_01_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_202:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 202 202_NA_MES4FLAG_EEMB_2_OID9534_136056A01_01_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#Strain=MES4FLAG#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_202:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#Strain=MES4FLAG#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -267 267_Dro2_AS_Kc167_RNu_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_267.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -267 267_Dro2_AS_Kc167_RNu_881.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_267.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -267 267_Dro2_AS_Kc167_RNu_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_267.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -267 267_Dro2_AS_Kc167_RNu_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_267.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -267 267_Dro2_AS_Kc167_RNu_881.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_267.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -268 268_Dro2_AS_Kc167_RWP+_731.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_268.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -268 268_Dro2_AS_Kc167_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_268.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -268 268_Dro2_AS_Kc167_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_268.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -268 268_Dro2_AS_Kc167_RWP+_731.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_268.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -268 268_Dro2_AS_Kc167_RWP+_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_268.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -274 274_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_274:62.pirrota_540_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_364.pirrota_542_A12_BEAF-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_274:64.pirrota_542_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_364.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274:364.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_repset.4620885.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_274:20.pirrota_499_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_321.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274:321.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_repset.4620885.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274:repset.4620885.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -274 274_321.pirrota_500_S14_BEAF-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_274:21.pirrota_500_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +267 267_Dro2_AS_Kc167_RNu_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_267.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +267 267_Dro2_AS_Kc167_RNu_881.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_267.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +267 267_Dro2_AS_Kc167_RNu_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_267.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +267 267_Dro2_AS_Kc167_RNu_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_267.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +267 267_Dro2_AS_Kc167_RNu_881.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_267.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +268 268_Dro2_AS_Kc167_RWP+_731.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_268.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +268 268_Dro2_AS_Kc167_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_268.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +268 268_Dro2_AS_Kc167_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_268.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +268 268_Dro2_AS_Kc167_RWP+_731.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_268.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +268 268_Dro2_AS_Kc167_RWP+_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_268.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +274 274_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_274:62.pirrota_540_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_364.pirrota_542_A12_BEAF-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_274:64.pirrota_542_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_364.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274:364.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_repset.4620885.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_274:20.pirrota_499_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_321.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274:321.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_repset.4620885.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_274:repset.4620885.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +274 274_321.pirrota_500_S14_BEAF-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_274:21.pirrota_500_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 275 275_293.pirrota_482_B2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_275:3.pirrota_482_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 275 275_repset.4620431.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_275:repset.4620431.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 275 275_304.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_275:304.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -511,46 +511,46 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 275 275_302.pirrota_491_B1_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_275:2.pirrota_491_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 275 275_302.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_275:302.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 275 275_292.pirrota_481_B1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_275:2.pirrota_481_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_288.pirrota_477_C18-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_276:8.pirrota_477_C18-1_Input_14cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_289.pirrota_478_C18-2_Input_14cyc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_276:9.pirrota_478_C18-2_Input_14cyc.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_296.pirrota_485_C18-2_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_276:6.pirrota_485_C18-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_repset.4620313.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276:repset.4620313.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_294.pirrota_483_C18-1_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_276:4.pirrota_483_C18-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_repset.4620313.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_296.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276:296.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -276 276_294.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276:294.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_repset.4620425.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_repset.4620425.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277:repset.4620425.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_298.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277:298.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_277:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_300.pirrota_489_Kc-2_Chro_Chirz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_277:300.pirrota_489_Kc-2_Chro_Chir.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_300.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277:300.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_298.pirrota_487_Kc-1_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_277:298.pirrota_487_Kc-1_Chro_Chri.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -277 277_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_277:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_278:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_repset.3833938.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278:repset.3833938.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_repset.3833938.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_278:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_130.pirrota_286_A9_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_278:130.pirrota_286_A9_Chro_C.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_72.pirrota_222_A8_chro_chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_278:72.pirrota_222_A8_chro_c.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_130.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278:130.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -278 278_72.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278:72.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_129.pirrota_285_A9_Chro_Chriz_WR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_279:129.pirrota_285_A9_Chro_C.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_279:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_repset.3833943.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279:repset.3833943.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_71.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279:71.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_279:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_repset.3833943.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_71.pirrota_221_A8_chro_chriz_WR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_279:71.pirrota_221_A8_chro_c.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -279 279_129.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279:129.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_280:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_403.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280:403.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_375.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280:375.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_repset.4621849.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_repset.4621849.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280:repset.4621849.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_375.pirrota_569_S14CP190-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_280:375.pirrota_569_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_280:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -280 280_403.pirrota_633_A14_CP190-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_280:403.pirrota_633_A14_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_288.pirrota_477_C18-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_276:8.pirrota_477_C18-1_Input_14cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_289.pirrota_478_C18-2_Input_14cyc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_276:9.pirrota_478_C18-2_Input_14cyc.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_296.pirrota_485_C18-2_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_276:6.pirrota_485_C18-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_repset.4620313.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276:repset.4620313.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_294.pirrota_483_C18-1_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_276:4.pirrota_483_C18-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_repset.4620313.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_296.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276:296.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +276 276_294.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_276:294.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_repset.4620425.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_repset.4620425.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277:repset.4620425.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_298.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277:298.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_277:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_300.pirrota_489_Kc-2_Chro_Chirz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_277:300.pirrota_489_Kc-2_Chro_Chir.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_300.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_277:300.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_298.pirrota_487_Kc-1_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_277:298.pirrota_487_Kc-1_Chro_Chri.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +277 277_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_277:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_278:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_repset.3833938.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278:repset.3833938.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_repset.3833938.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_278:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_130.pirrota_286_A9_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_278:130.pirrota_286_A9_Chro_C.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_72.pirrota_222_A8_chro_chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_278:72.pirrota_222_A8_chro_c.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_130.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278:130.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +278 278_72.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_278:72.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_129.pirrota_285_A9_Chro_Chriz_WR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_279:129.pirrota_285_A9_Chro_C.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_279:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_repset.3833943.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279:repset.3833943.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_71.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279:71.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_279:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_repset.3833943.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_71.pirrota_221_A8_chro_chriz_WR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_279:71.pirrota_221_A8_chro_c.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +279 279_129.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_279:129.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_280:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_403.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280:403.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_375.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280:375.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_repset.4621849.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_repset.4621849.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_280:repset.4621849.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_375.pirrota_569_S14CP190-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_280:375.pirrota_569_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_280:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +280 280_403.pirrota_633_A14_CP190-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_280:403.pirrota_633_A14_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 282 282_406.pirrota_621_B5_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_282:6.pirrota_621_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 282 282_repset.4621686.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_282:repset.4621686.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 282 282_410.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_282:410.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -559,33 +559,33 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 282 282_411.pirrota_628_B5_CTCF-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_282:1.pirrota_628_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 282 282_405.pirrota_620_B3_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_282:5.pirrota_620_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 282 282_410.pirrota_627_B3_CTCF-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_282:0.pirrota_627_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_283:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_repset.4621693.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_396.pirrota_589_S14_CTCF-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_283:396.pirrota_589_S.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_409.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283:409.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_409.pirrota_626_A14_CTCF-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_283:409.pirrota_626_A.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_283:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_396.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283:396.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -283 283_repset.4621693.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283:repset.4621693.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_50.pirrota_186_S8_E_Z.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_284:50.pirrota_186_S8_E_Z.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_124.pirrota_279_S13_Ez.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_284:124.pirrota_279_S13_Ez.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_284:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_284:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_116.pirrota_264_S13_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_284:116.pirrota_264_S13_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_repset.3506179.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_50.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:50.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_365.pirrota_543_S14_EZ.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_284:365.pirrota_543_S14_EZ.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_124.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:124.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_repset.3506179.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:repset.3506179.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -284 284_365.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:365.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_49.pirrota_185_S8_GAF.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_285:49.pirrota_185_S8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_49.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285:49.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_repset.3211334.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285:repset.3211334.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_119.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285:119.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_repset.3211334.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_116.pirrota_264_S13_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_285:116.pirrota_264_S13_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_285:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -285 285_119.pirrota_267_S13_GAF.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_285:119.pirrota_267_S13.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_283:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_repset.4621693.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_396.pirrota_589_S14_CTCF-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_283:396.pirrota_589_S.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_409.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283:409.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_409.pirrota_626_A14_CTCF-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_283:409.pirrota_626_A.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_283:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_396.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283:396.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +283 283_repset.4621693.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_283:repset.4621693.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_50.pirrota_186_S8_E_Z.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_284:50.pirrota_186_S8_E_Z.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_124.pirrota_279_S13_Ez.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_284:124.pirrota_279_S13_Ez.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_284:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_284:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_116.pirrota_264_S13_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_284:116.pirrota_264_S13_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_repset.3506179.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_50.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:50.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_365.pirrota_543_S14_EZ.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_284:365.pirrota_543_S14_EZ.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_124.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:124.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_repset.3506179.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:repset.3506179.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +284 284_365.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_284:365.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_49.pirrota_185_S8_GAF.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_285:49.pirrota_185_S8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_49.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285:49.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_repset.3211334.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285:repset.3211334.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_119.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285:119.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_repset.3211334.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_285.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_116.pirrota_264_S13_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_285:116.pirrota_264_S13_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_285:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +285 285_119.pirrota_267_S13_GAF.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_285:119.pirrota_267_S13.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 288 288_repset.4620886.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_288:repset.4620886.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 288 288_repset.4620886.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_288.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 288 288_338.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_288:338.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -594,22 +594,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 288 288_339.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_288:339.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 288 288_338.pirrota_544_B1_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_288:8.pirrota_544_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 288 288_339.pirrota_545_B2_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_288:9.pirrota_545_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_289:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_289:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_352.pirrota_558_Kc-1_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_289:2.pirrota_558_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_353.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289:353.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_repset.4621049.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289:repset.4621049.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_352.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289:352.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_353.pirrota_559_Kc-2_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_289:3.pirrota_559_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -289 289_repset.4621049.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_307.pirrota_464_A9_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_290:7.pirrota_464_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_repset.4162649.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290:repset.4162649.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_290:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_307.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290:307.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_306.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290:306.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_290:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_repset.4162649.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -290 290_306.pirrota_463_A8_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_290:6.pirrota_463_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_289:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_289:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_352.pirrota_558_Kc-1_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_289:2.pirrota_558_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_353.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289:353.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_repset.4621049.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289:repset.4621049.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_352.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289:352.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_353.pirrota_559_Kc-2_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_289:3.pirrota_559_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +289 289_repset.4621049.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_289.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_307.pirrota_464_A9_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_290:7.pirrota_464_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_repset.4162649.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290:repset.4162649.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_290:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_307.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290:307.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_306.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290:306.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_290:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_repset.4162649.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_290.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +290 290_306.pirrota_463_A8_H2B-ubiq.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_290:6.pirrota_463_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 291 291_275.pirrota_453_B2_H3K18ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_291:5.pirrota_453_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 291 291_274.pirrota_452_B1_H3K18ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_291:4.pirrota_452_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 291 291_251.pirrota_425_B2_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_291:1.pirrota_425_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -618,14 +618,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 291 291_275.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_291:275.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 291 291_repset.4162513.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_291:repset.4162513.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 291 291_274.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_291:274.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_292:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_36.pirrota_188_A3H3K18Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_292:36.pirrota_188_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_80.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292:80.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_36.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292:36.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_repset.3506196.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292:repset.3506196.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_repset.3506196.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_38.pirrota_190_A3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_292:38.pirrota_190_A3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -292 292_80.pirrota_230_S12_H3K18Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_292:80.pirrota_230_S12_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_292:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_36.pirrota_188_A3H3K18Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_292:36.pirrota_188_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_80.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292:80.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_36.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292:36.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_repset.3506196.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292:repset.3506196.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_repset.3506196.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_292.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_38.pirrota_190_A3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_292:38.pirrota_190_A3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +292 292_80.pirrota_230_S12_H3K18Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_292:80.pirrota_230_S12_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 293 293_282.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_293:282.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 293 293_283.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_293:283.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 293 293_repset.4620312.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_293.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -634,16 +634,16 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 293 293_283.pirrota_472_B2_H3K23ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_293:3.pirrota_472_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 293 293_repset.4620312.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_293:repset.4620312.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 293 293_250.pirrota_424_B1_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_293:0.pirrota_424_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_repset.3506195.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:repset.3506195.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_294:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_37.pirrota_189_A3H3K23Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_294:37.pirrota_189_A3H3K23A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_198.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:198.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_81.pirrota_231_S12_H3K23Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_294:81.pirrota_231_S12_H3K23A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_37.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:37.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_198.pirrota_381_S12_H3K23ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_294:198.pirrota_381_S12_H3K23a.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_81.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:81.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_repset.3506195.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -294 294_38.pirrota_190_A3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_294:38.pirrota_190_A3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_repset.3506195.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:repset.3506195.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_294:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_37.pirrota_189_A3H3K23Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_294:37.pirrota_189_A3H3K23A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_198.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:198.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_81.pirrota_231_S12_H3K23Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_294:81.pirrota_231_S12_H3K23A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_37.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:37.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_198.pirrota_381_S12_H3K23ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_294:198.pirrota_381_S12_H3K23a.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_81.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294:81.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_repset.3506195.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_294.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +294 294_38.pirrota_190_A3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_294:38.pirrota_190_A3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 295 295_261.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_295:261.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 295 295_260.pirrota_430_B3_H3K27Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_295:0.pirrota_430_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 295 295_repset.4162469.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_295:repset.4162469.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -652,14 +652,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 295 295_260.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_295:260.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 295 295_repset.4162469.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_295.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 295 295_253.pirrota_437_B3_INPUT.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_295:3.pirrota_437_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_57.pirrota_207_S8_H3K27Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_296:57.pirrota_207_S8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_97.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296:97.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_57.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296:57.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_296:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_296:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_repset.3211339.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_97.pirrota_235_S12_H3K27Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_296:97.pirrota_235_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -296 296_repset.3211339.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296:repset.3211339.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_57.pirrota_207_S8_H3K27Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_296:57.pirrota_207_S8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_97.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296:97.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_57.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296:57.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_296:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_296:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_repset.3211339.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_97.pirrota_235_S12_H3K27Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_296:97.pirrota_235_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +296 296_repset.3211339.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_296:repset.3211339.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 297 297_268.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_297:268.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 297 297_repset.4162470.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_297:repset.4162470.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 297 297_253.pirrota_437_B3_INPUT.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_297:3.pirrota_437_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -668,14 +668,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 297 297_269.pirrota_443_B4_H3K27Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_297:9.pirrota_443_B4.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 297 297_repset.4162470.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_297.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 297 297_269.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_297:269.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_377.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298:377.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_377.pirrota_571_S14H3K27me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_298:377.pirrota_571_S14H3K27m.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_147.pirrota_302_S11_H3K27Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_298:147.pirrota_302_S11_H3K27M.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_298:143.pirrota_298_S11_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_147.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298:147.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_repset.4621697.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298:repset.4621697.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_repset.4621697.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -298 298_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_298:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_377.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298:377.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_377.pirrota_571_S14H3K27me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_298:377.pirrota_571_S14H3K27m.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_147.pirrota_302_S11_H3K27Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_298:147.pirrota_302_S11_H3K27M.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_298:143.pirrota_298_S11_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_147.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298:147.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_repset.4621697.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298:repset.4621697.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_repset.4621697.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_298.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +298 298_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_298:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 299 299_repset.4621048.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_299.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 299 299_347.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_299:347.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 299 299_293.pirrota_482_B2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_299:3.pirrota_482_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -692,44 +692,44 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 301 301_repset.4621052.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_301.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 301 301_repset.4621052.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_301:repset.4621052.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 301 301_344.pirrota_550__B1_H3K36me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_301:4.pirrota_550__B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_repset.4621046.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_302:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_repset.4621046.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302:repset.4621046.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_302:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_357.pirrota_563_Kc-2_H3K36me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_302:7.pirrota_563_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_356.pirrota_562_Kc-1_H3K36me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_302:6.pirrota_562_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_356.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302:356.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -302 302_357.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302:357.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_repset.3211313.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_10.pirrota_142_A3_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_303:0.pirrota_142_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_11.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303:11.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_13.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303:13.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_11.pirrota_143_A3_k36me3_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_303:1.pirrota_143_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_13.pirrota_145_A7_k36me3_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_303:3.pirrota_145_A7.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_12.pirrota_144_A7_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_303:2.pirrota_144_A7.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -303 303_repset.3211313.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303:repset.3211313.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_304:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_394.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:394.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_304:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_412.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:412.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_304:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_394.pirrota_587_A12_H3K4me1.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_304:394.pirrota_587_A12_H3K4me1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_412.pirrota_629_A14_H3K4me1.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_304:412.pirrota_629_A14_H3K4me1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_repset.3211335.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_99.pirrota_237_S12_H3K4Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_304:99.pirrota_237_S12_H3K4Me.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_repset.3211335.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:repset.3211335.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -304 304_99.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:99.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_102.pirrota_240_S12_H4K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_305:02.pirrota_240_S12_H4.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_102.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:102.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_repset.3211336.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:repset.3211336.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_305:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_154.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:154.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_103.pirrota_241_S8_H4K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_305:03.pirrota_241_S8_H4.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_305:148.pirrota_303_S14_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_305:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_103.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:103.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_repset.3211336.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -305 305_154.pirrota_309_S14_H3K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_305:54.pirrota_309_S14_H3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_repset.4621046.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_302:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_repset.4621046.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302:repset.4621046.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_302:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_357.pirrota_563_Kc-2_H3K36me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_302:7.pirrota_563_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_356.pirrota_562_Kc-1_H3K36me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_302:6.pirrota_562_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_356.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302:356.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +302 302_357.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_302:357.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_repset.3211313.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_10.pirrota_142_A3_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_303:0.pirrota_142_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_11.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303:11.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_13.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303:13.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_11.pirrota_143_A3_k36me3_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_303:1.pirrota_143_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_13.pirrota_145_A7_k36me3_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_303:3.pirrota_145_A7.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_12.pirrota_144_A7_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_303:2.pirrota_144_A7.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +303 303_repset.3211313.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_303:repset.3211313.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_304:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_394.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:394.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_304:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_412.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:412.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_304:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_394.pirrota_587_A12_H3K4me1.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_304:394.pirrota_587_A12_H3K4me1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_412.pirrota_629_A14_H3K4me1.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_304:412.pirrota_629_A14_H3K4me1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_repset.3211335.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_99.pirrota_237_S12_H3K4Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_304:99.pirrota_237_S12_H3K4Me.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_repset.3211335.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:repset.3211335.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +304 304_99.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_304:99.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_102.pirrota_240_S12_H4K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_305:02.pirrota_240_S12_H4.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_102.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:102.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_repset.3211336.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:repset.3211336.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_305:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_154.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:154.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_103.pirrota_241_S8_H4K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_305:03.pirrota_241_S8_H4.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_305:148.pirrota_303_S14_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_305:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_103.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305:103.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_repset.3211336.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_305.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +305 305_154.pirrota_309_S14_H3K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_305:54.pirrota_309_S14_H3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 306 306_repset.4162473.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_306.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 306 306_217.pirrota_374_B2_H3K79Me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_306:17.pirrota_374_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 306 306_217.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_306:217.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -738,22 +738,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 306 306_253.pirrota_437_B3_INPUT.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_306:53.pirrota_437_B3_INPUT.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 306 306_208.pirrota_365_B2_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_306:08.pirrota_365_B2_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 306 306_repset.4162473.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_306:repset.4162473.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_117.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307:117.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_98.pirrota_236_S12_H3K79Me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_307:98.pirrota_236_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_repset.3211314.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_117.pirrota_265_S8_H3K79Me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_307:117.pirrota_265_S8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_repset.3211314.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307:repset.3211314.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_98.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307:98.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_307:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -307 307_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_307:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_repset.3506200.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_38.pirrota_190_A3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_309:38.pirrota_190_A3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_309:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_79.pirrota_229_S12_H3K9Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_309:79.pirrota_229_S12_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_35.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309:35.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_79.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309:79.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_repset.3506200.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309:repset.3506200.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -309 309_35.pirrota_187_A3H3K9Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_309:35.pirrota_187_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_117.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307:117.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_98.pirrota_236_S12_H3K79Me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_307:98.pirrota_236_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_repset.3211314.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_117.pirrota_265_S8_H3K79Me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_307:117.pirrota_265_S8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_repset.3211314.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307:repset.3211314.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_98.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_307:98.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_58.pirrota_208_S12_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_307:58.pirrota_208_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +307 307_40.pirrota_182_S8_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_307:40.pirrota_182_S8_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_repset.3506200.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_38.pirrota_190_A3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_309:38.pirrota_190_A3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_309:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_79.pirrota_229_S12_H3K9Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_309:79.pirrota_229_S12_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_35.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309:35.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_79.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309:79.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_repset.3506200.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_309:repset.3506200.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +309 309_35.pirrota_187_A3H3K9Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_309:35.pirrota_187_A3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 310 310_251.pirrota_425_B2_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_310:1.pirrota_425_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 310 310_repset.4620569.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_310:repset.4620569.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 310 310_272.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_310:272.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -762,14 +762,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 310 310_248.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_310:248.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 310 310_repset.4620569.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_310.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 310 310_248.pirrota_422_B1_H3K9me2ab2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_310:48.pirrota_422_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_83.pirrota_233_S12_H3K9me2_Ab2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_311:83.pirrota_233_S12_H3K9me2_A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_42.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311:42.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_311:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_repset.3506197.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311:repset.3506197.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_83.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311:83.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_46.pirrota_196_S9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_311:46.pirrota_196_S9_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_repset.3506197.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -311 311_42.pirrota_192_S9_H3K9me2ab2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_311:42.pirrota_192_S9_H3K9me2a.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_83.pirrota_233_S12_H3K9me2_Ab2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_311:83.pirrota_233_S12_H3K9me2_A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_42.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311:42.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_311:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_repset.3506197.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311:repset.3506197.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_83.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311:83.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_46.pirrota_196_S9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_311:46.pirrota_196_S9_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_repset.3506197.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_311.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +311 311_42.pirrota_192_S9_H3K9me2ab2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_311:42.pirrota_192_S9_H3K9me2a.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 312 312_329.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_312:329.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 312 312_326.pirrota_505_B1_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_312:6.pirrota_505_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 312 312_329.pirrota_507_B2_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_312:9.pirrota_507_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -778,14 +778,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 312 312_repset.4620432.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_312.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 312 312_251.pirrota_425_B2_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_312:1.pirrota_425_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 312 312_250.pirrota_424_B1_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_312:0.pirrota_424_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_repset.3506194.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313:repset.3506194.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_313:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_84.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313:84.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_43.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313:43.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_84.pirrota_234_S12_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_313:84.pirrota_234_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_46.pirrota_196_S9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_313:46.pirrota_196_S9_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_43.pirrota_193_S9_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_313:43.pirrota_193_S9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -313 313_repset.3506194.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_repset.3506194.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313:repset.3506194.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_85.pirrota_242_S12_Input_14_cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_313:85.pirrota_242_S12_Input_14_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_84.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313:84.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_43.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313:43.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_84.pirrota_234_S12_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_313:84.pirrota_234_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_46.pirrota_196_S9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_313:46.pirrota_196_S9_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_43.pirrota_193_S9_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_313:43.pirrota_193_S9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +313 313_repset.3506194.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_313.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 316 316_305.pirrota_494_B2_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_316:5.pirrota_494_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 316 316_repset.4620430.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_316.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 316 316_293.pirrota_482_B2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_316:3.pirrota_482_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -794,62 +794,62 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 316 316_303.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_316:303.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 316 316_repset.4620430.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_316:repset.4620430.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 316 316_292.pirrota_481_B1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_316:2.pirrota_481_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_repset.4621692.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317:repset.4621692.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_295.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317:295.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_289.pirrota_478_C18-2_Input_14cyc.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_317:9.pirrota_478_C18-2_Input_14cyc.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_repset.4621692.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_297.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317:297.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_295.pirrota_484_C18-1_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_317:5.pirrota_484_C18-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_288.pirrota_477_C18-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_317:8.pirrota_477_C18-1_Input_14cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -317 317_297.pirrota_486-R_C18-2_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_317:7.pirrota_486-R_C18-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_318:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_repset.4620427.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318:repset.4620427.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_299.pirrota_488_Kc-1_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_318:299.pirrota_488_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_318:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_repset.4620427.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_299.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318:299.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_301.pirrota_490_Kc-2_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_318:301.pirrota_490_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -318 318_301.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318:301.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_64.pirrota_214_A8_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_319:64.pirrota_214_A8_H4K16ac_L_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_repset.3833937.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319:repset.3833937.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_repset.3833937.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_319:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_127.pirrota_283_A9_H4K16ac_L.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_319:127.pirrota_283_A9_H4K16ac_L.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_127.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319:127.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_64.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319:64.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -319 319_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_319:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_128.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320:128.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_repset.3833941.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_repset.3833941.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320:repset.3833941.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_67.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320:67.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_128.pirrota_284_A9_H4K16ac_M.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_320:128.pirrota_284_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_67.pirrota_217_A8_H4K16ac_M.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_320:67.pirrota_217_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_320:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -320 320_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_320:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_29.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321:29.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_321:62.pirrota_212_A8_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_repset.3211333.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321:repset.3211333.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_69.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321:69.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_29.pirrota_173_ART8_H4AcK5_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_321:29.pirrota_173_ART8_H4AcK5_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_repset.3211333.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_10.pirrota_142_A3_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_321:10.pirrota_142_A3_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -321 321_69.pirrota_219_A8_H4K5ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_321:69.pirrota_219_A8_H4K5ac.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_322:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_repset.3833940.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_126.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322:126.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_322:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_63.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322:63.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_repset.3833940.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322:repset.3833940.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_126.pirrota_282_A9_H4K8ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_322:126.pirrota_282_A9_H4K8a.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -322 322_63.pirrota_213_A8_H4K8Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_322:63.pirrota_213_A8_H4K8A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_pirrota_469_S12_HP1wa191.280.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_323:69_S12_HP1wa191.280.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_280.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323:280.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_pirrota_470_A12_HP1wa191.281.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_323:70_A12_HP1wa191.281.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_323:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_pirrota_414_A12_Input.240.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_323:414_A12_Input.240.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_repset.4162650.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323:repset.4162650.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_repset.4162650.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -323 323_281.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323:281.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_repset.4621692.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317:repset.4621692.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_295.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317:295.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_289.pirrota_478_C18-2_Input_14cyc.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_317:9.pirrota_478_C18-2_Input_14cyc.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_repset.4621692.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_297.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_317:297.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_295.pirrota_484_C18-1_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_317:5.pirrota_484_C18-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_288.pirrota_477_C18-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_317:8.pirrota_477_C18-1_Input_14cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +317 317_297.pirrota_486-R_C18-2_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_317:7.pirrota_486-R_C18-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_318:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_repset.4620427.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318:repset.4620427.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_299.pirrota_488_Kc-1_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_318:299.pirrota_488_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_318:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_repset.4620427.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_299.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318:299.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_301.pirrota_490_Kc-2_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_318:301.pirrota_490_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +318 318_301.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_318:301.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_64.pirrota_214_A8_H4K16ac_L_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_319:64.pirrota_214_A8_H4K16ac_L_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_repset.3833937.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319:repset.3833937.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_repset.3833937.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_319:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_127.pirrota_283_A9_H4K16ac_L.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_319:127.pirrota_283_A9_H4K16ac_L.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_127.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319:127.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_64.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_319:64.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +319 319_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_319:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_128.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320:128.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_repset.3833941.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_repset.3833941.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320:repset.3833941.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_67.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_320:67.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_128.pirrota_284_A9_H4K16ac_M.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_320:128.pirrota_284_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_67.pirrota_217_A8_H4K16ac_M.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_320:67.pirrota_217_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_320:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +320 320_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_320:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_29.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321:29.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_321:62.pirrota_212_A8_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_repset.3211333.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321:repset.3211333.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_69.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321:69.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_29.pirrota_173_ART8_H4AcK5_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_321:29.pirrota_173_ART8_H4AcK5_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_repset.3211333.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_321.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_10.pirrota_142_A3_Input_HD.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_321:10.pirrota_142_A3_Input_HD.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +321 321_69.pirrota_219_A8_H4K5ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_321:69.pirrota_219_A8_H4K5ac.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_322:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_repset.3833940.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_126.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322:126.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_322:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_63.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322:63.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_repset.3833940.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_322:repset.3833940.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_126.pirrota_282_A9_H4K8ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_322:126.pirrota_282_A9_H4K8a.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +322 322_63.pirrota_213_A8_H4K8Ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_322:63.pirrota_213_A8_H4K8A.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_pirrota_469_S12_HP1wa191.280.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_323:69_S12_HP1wa191.280.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_280.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323:280.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_pirrota_470_A12_HP1wa191.281.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_323:70_A12_HP1wa191.281.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_323:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_pirrota_414_A12_Input.240.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_323:414_A12_Input.240.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_repset.4162650.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323:repset.4162650.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_repset.4162650.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +323 323_281.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_323:281.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 324 324_406.pirrota_621_B5_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_324:6.pirrota_621_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 324 324_repset.4621691.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 mod(mdg4):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_324.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 324 324_398.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_324:398.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -866,54 +866,54 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 325 325_repset.4162467.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_325.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 325 325_222.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_325:222.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 325 325_262.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_325:262.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_146.pirrota_301_S11_Pc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_326:46.pirrota_301_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_146.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326:146.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_118.pirrota_266_S13_Pc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_326:18.pirrota_266_S13.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_326:43.pirrota_298_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_repset.3211340.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_118.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326:118.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_repset.3211340.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326:repset.3211340.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -326 326_116.pirrota_264_S13_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_326:16.pirrota_264_S13.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_361.pirrota_567_C18-2_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_327:1.pirrota_567_C18-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_360.pirrota_566_C18-1_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_327:0.pirrota_566_C18-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_361.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327:361.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_289.pirrota_478_C18-2_Input_14cyc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_327:9.pirrota_478_C18-2_Input_14cyc.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_repset.4621053.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327:repset.4621053.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_360.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327:360.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_repset.4621053.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -327 327_288.pirrota_477_C18-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_327:8.pirrota_477_C18-1_Input_14cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_351.pirrota_557_Kc-2_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_328:1.pirrota_557_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_328:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_repset.4621047.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_350.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328:350.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_351.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328:351.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_repset.4621047.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328:repset.4621047.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_328:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -328 328_350.pirrota_556_Kc-1_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_328:0.pirrota_556_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_310.pirrota_467_A8_RNApolII_ALG.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_329:0.pirrota_467_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_329:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_310.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329:310.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_329:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_311.pirrota_468_A9_RNApolII_ALG.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_329:1.pirrota_468_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_repset.4162648.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_311.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329:311.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -329 329_repset.4162648.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329:repset.4162648.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_repset.4621225.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330:repset.4621225.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_330:20.pirrota_499_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_392.pirrota_585_A12_Su_Hw_-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_330:92.pirrota_585_A12_Su_Hw_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_323.pirrota_502_S14_SUHW-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_330:23.pirrota_502_S14_SUHW.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_323.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330:323.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_330:62.pirrota_540_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_repset.4621225.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -330 330_392.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330:392.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_374.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331:374.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_374.pirrota_568_S14Su_HW_-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_331:374.pirrota_568_S14Su_HW.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_repset.4621850.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331:repset.4621850.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_402.pirrota_632_A14_Su_Hw_-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_331:402.pirrota_632_A14_Su_Hw.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_331:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_331:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_402.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331:402.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -331 331_repset.4621850.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_146.pirrota_301_S11_Pc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_326:46.pirrota_301_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_146.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326:146.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_118.pirrota_266_S13_Pc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_326:18.pirrota_266_S13.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_326:43.pirrota_298_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_repset.3211340.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_118.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326:118.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_repset.3211340.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_326:repset.3211340.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +326 326_116.pirrota_264_S13_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_326:16.pirrota_264_S13.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_361.pirrota_567_C18-2_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_327:1.pirrota_567_C18-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_360.pirrota_566_C18-1_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_327:0.pirrota_566_C18-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_361.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327:361.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_289.pirrota_478_C18-2_Input_14cyc.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_327:9.pirrota_478_C18-2_Input_14cyc.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_repset.4621053.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327:repset.4621053.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_360.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327:360.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_repset.4621053.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_327.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +327 327_288.pirrota_477_C18-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_327:8.pirrota_477_C18-1_Input_14cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_351.pirrota_557_Kc-2_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_328:1.pirrota_557_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_290.pirrota_479_Kc-1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_328:0.pirrota_479_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_repset.4621047.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_350.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328:350.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_351.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328:351.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_repset.4621047.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_328:repset.4621047.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_291.pirrota_480_Kc-2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_328:1.pirrota_480_Kc-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +328 328_350.pirrota_556_Kc-1_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_328:0.pirrota_556_Kc-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_310.pirrota_467_A8_RNApolII_ALG.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_329:0.pirrota_467_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_136.pirrota_292_A9_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_329:136.pirrota_292_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_310.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329:310.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_62.pirrota_212_A8_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_329:62.pirrota_212_A8.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_311.pirrota_468_A9_RNApolII_ALG.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_329:1.pirrota_468_A9.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_repset.4162648.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_311.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329:311.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +329 329_repset.4162648.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_329:repset.4162648.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_repset.4621225.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330:repset.4621225.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_330:20.pirrota_499_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_392.pirrota_585_A12_Su_Hw_-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_330:92.pirrota_585_A12_Su_Hw_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_323.pirrota_502_S14_SUHW-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_330:23.pirrota_502_S14_SUHW.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_323.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330:323.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_330:62.pirrota_540_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_repset.4621225.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +330 330_392.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_330:392.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_374.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331:374.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_374.pirrota_568_S14Su_HW_-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_331:374.pirrota_568_S14Su_HW.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_repset.4621850.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331:repset.4621850.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_402.pirrota_632_A14_Su_Hw_-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_331:402.pirrota_632_A14_Su_Hw.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_331:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_404.pirrota_619_A14_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_331:404.pirrota_619_A14_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_402.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331:402.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +331 331_repset.4621850.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_331.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 334 334_JL00003_DPY26_N2_MXemb_3.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle DPY-26:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_334:3.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip DPY-26 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 334 334_JL00003_DPY26_N2_MXemb_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle DPY-26:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_334:2.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip DPY-26 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 334 334_JL00003_DPY26_N2_MXemb_3_10421302_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-26:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_334:3_10421302_IN_532.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-26 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -947,12 +947,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 338 338_JL00005_SDC2_N2_MXemb_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SDC-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_338.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip SDC-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 338 338_JL00005_SDC2_N2_MXemb_2_12008701_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_338.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 338 338_JL00005_SDC2_N2_MXemb_1_11975001_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_338.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -342 342_SRR030165.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:65.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -342 342_SRR030171.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:71.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -342 342_SRR030166.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:66.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -342 342_SRR030167.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:67.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -342 342_SRR030169.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:69.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -342 342_Dm_KC167_Total_Ap_p200_Tap_467_ExactUniq_BR1_TR1-8.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +342 342_SRR030165.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:65.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +342 342_SRR030171.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:71.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +342 342_SRR030166.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:66.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +342 342_SRR030167.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:67.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +342 342_SRR030169.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342:69.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +342 342_Dm_KC167_Total_Ap_p200_Tap_467_ExactUniq_BR1_TR1-8.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_342.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 343 343_Dm_emb_16-18h_Total_Ap_p200_Tap_259_ExactUniq_BR1_TR1.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Embryos-16-18-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_343.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Embryos 16-18 hr Developmental-Stage=Embryos 16-18 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 346 346_AdultFemale-K27Me3-2-251918210077.txt.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile-agilent_txt H3K27me3:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_346:2-251918210077.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Histone Modification ChIP-chip H3K27me3 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 346 346_AdultFemale-K27Me3-1-251918410023.txt.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile-agilent_txt H3K27me3:Developmental-Stage=Adult-Female:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_346.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Histone Modification ChIP-chip H3K27me3 Adult Female Developmental-Stage=Adult Female Rep-3 Dmel_r5.32 White, K. Histone modification and replacement @@ -985,25 +985,25 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 359 359_L3-K27Me3-2-251918210152.txt.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile-agilent_txt H3K27me3:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_359:2-251918210152.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 359 359_L3_K27Me3.dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me3:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_359.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 359 359_L3_K9Me3_agilent_dmel3_segmented_merged_5000_data_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_359.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -360 360_SRR030160.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_360.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -360 360_SRR030162.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_360.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -360 360_Dm_KC167_Total_m200_Tap_RiboM_3_ExactUniq_BR2_TR1-2.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -360 360_Dm_KC167_Total_m200_Tap_RiboM_1_ExactUniq_BR1_TR1-2.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -362 362_SRR030177.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362:77.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -362 362_SRR030174.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -362 362_SRR030176.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -362 362_SRR030180.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362:80.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -362 362_Dm_S2-DRSC_Total_m200_Tap_RiboM_13_ExactUniq_BR1_TR1-4.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -362 362_Dm_S2-DRSC_Total_m200_Tap_RiboM_15_ExactUniq_BR2_TR1-4.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -362 362_SRR030173.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -362 362_SRR030179.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362:79.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -364 364_SRR030154.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_364:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -364 364_SRR030159.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -364 364_SRR030155.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_364:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -364 364_Dm_Cl.8_Total_m200_Tap_RiboM_59_ExactUniq_BR1_TR1-3.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_364.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -364 364_Dm_Cl.8_Total_m200_Tap_RiboM_61_ExactUniq_BR2_TR1-4.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -364 364_SRR030156.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -364 364_SRR030158.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +360 360_SRR030160.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_360.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +360 360_SRR030162.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_360.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +360 360_Dm_KC167_Total_m200_Tap_RiboM_3_ExactUniq_BR2_TR1-2.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +360 360_Dm_KC167_Total_m200_Tap_RiboM_1_ExactUniq_BR1_TR1-2.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +362 362_SRR030177.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362:77.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +362 362_SRR030174.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +362 362_SRR030176.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +362 362_SRR030180.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362:80.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +362 362_Dm_S2-DRSC_Total_m200_Tap_RiboM_13_ExactUniq_BR1_TR1-4.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +362 362_Dm_S2-DRSC_Total_m200_Tap_RiboM_15_ExactUniq_BR2_TR1-4.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +362 362_SRR030173.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_362:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +362 362_SRR030179.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_362:79.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +364 364_SRR030154.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_364:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +364 364_SRR030159.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +364 364_SRR030155.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_364:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +364 364_Dm_Cl.8_Total_m200_Tap_RiboM_59_ExactUniq_BR1_TR1-3.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_364.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +364 364_Dm_Cl.8_Total_m200_Tap_RiboM_61_ExactUniq_BR2_TR1-4.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +364 364_SRR030156.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +364 364_SRR030158.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_364:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 366 366_SRR030146.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_366:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 366 366_Dm_BG3-c2_Total_m200_Tap_RiboM_121_ExactUniq_BR1_TR1.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_366.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 366 366_SRR030147.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_366:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure @@ -1554,46 +1554,46 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 432 432_AdultFemale_H3K4Me1_merged_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me1:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_432.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me1 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 432 432_AdultFemale-K4Me1-1-251918210057.txt.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile-agilent_txt H3K4me1:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_432:210057.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Histone Modification ChIP-chip H3K4me1 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 432 432_AdultFemale-K4Me1-1-251918310276.txt.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile-agilent_txt H3K4me1:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_432:310276.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Histone Modification ChIP-chip H3K4me1 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -455 455_534DMM15-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_455:5-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_emb-panneural-17_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:17_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_emb-panneural-16_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:16_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_emb-panneural-15_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:15_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_emb-panneural_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_emb-panneural_tars_maxgap30_minrun100_thresh8.26.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_534DMM17-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_455:7-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -455 455_534DMM16-20071108-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_455:6-20071108-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_534DMM60-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_456:60-20080327.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_emb-ref-66_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:66_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_534DMM58-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_456:58-20080118.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_emb-ref-58_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:58_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_emb-reference_tars_maxgap30_minrun100_thresh8.60.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_534DMM66-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_456:66-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_emb-ref-60_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:60_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -456 456_emb-reference_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:erence_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_emb-intestine-76_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:76_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_emb-intestine-70_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:70_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_emb-intestine_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_534DMM75-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_457:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_534DMM70-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_457:0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_534DMM76-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_457:6.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_emb-intestine_tars_maxgap30_minrun100_thresh6.96.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -457 457_emb-intestine-75_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:75_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_534DMM82-20080508-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_458:2.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_emb-coelomocytes-83_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:83_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_emb-coelomocytes-85_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:85_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_emb-coelomocytes_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_emb-coelomocytes-82_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:82_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_534DMM85-20080508-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_458:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_emb-coelomocytes_tars_maxgap30_minrun100_thresh7.60.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -458 458_534DMM83-20080508-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_458:3.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_534DMM56-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_459:534DMM56-20080118.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_638DMM24-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_459:638DMM24-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_emb-AVA_tars_maxgap30_minrun100_thresh9.17.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_emb-AVA-56_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:56_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_emb-AVA_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_534DMM57-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_459:534DMM57-20080118.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_emb-AVA-57_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:57_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -459 459_emb-AVA-24_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:24_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_534DMM15-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_455:5-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_emb-panneural-17_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:17_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_emb-panneural-16_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:16_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_emb-panneural-15_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:15_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_emb-panneural_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_emb-panneural_tars_maxgap30_minrun100_thresh8.26.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_455.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_534DMM17-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_455:7-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +455 455_534DMM16-20071108-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NW1229#Tissue=Panneural#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_455:6-20071108-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NW1229#Tissue=Panneural#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_534DMM60-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_456:60-20080327.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_emb-ref-66_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:66_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_534DMM58-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_456:58-20080118.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_emb-ref-58_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:58_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_emb-reference_tars_maxgap30_minrun100_thresh8.60.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_534DMM66-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_456:66-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_emb-ref-60_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:60_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +456 456_emb-reference_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_456:erence_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_emb-intestine-76_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:76_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_emb-intestine-70_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:70_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_emb-intestine_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_534DMM75-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_457:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_534DMM70-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_457:0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_534DMM76-20080327-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_457:6.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_emb-intestine_tars_maxgap30_minrun100_thresh6.96.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +457 457_emb-intestine-75_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=JR1130#Tissue=Intestinal-cells#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_457:75_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=JR1130#Tissue=Intestinal cells#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_534DMM82-20080508-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_458:2.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_emb-coelomocytes-83_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:83_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_emb-coelomocytes-85_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:85_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_emb-coelomocytes_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_emb-coelomocytes-82_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458:82_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_534DMM85-20080508-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_458:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_emb-coelomocytes_tars_maxgap30_minrun100_thresh7.60.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_458.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +458 458_534DMM83-20080508-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_458:3.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=TV1112#Tissue=Coelomocytes#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_534DMM56-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_459:534DMM56-20080118.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_638DMM24-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_459:638DMM24-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_emb-AVA_tars_maxgap30_minrun100_thresh9.17.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_emb-AVA-56_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:56_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_emb-AVA_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_534DMM57-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_459:534DMM57-20080118.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_emb-AVA-57_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:57_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +459 459_emb-AVA-24_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_459:24_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1749#Tissue=Embryo-AVA#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 460 460_L3-L4-PVD_OLL_tars_maxgap30_minrun100_thresh7.00.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1021#Tissue=PVD-OLLs-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_460.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1021#Tissue=PVD OLLs (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 460 460_534DMM51-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1021#Tissue=PVD-OLLs-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_460:51.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1021#Tissue=PVD OLLs (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 460 460_PVD_OLL-50_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1021#Tissue=PVD-OLLs-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_460:PVD_OLL-50_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1021#Tissue=PVD OLLs (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -1602,22 +1602,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 460 460_534DMM50-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1021#Tissue=PVD-OLLs-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_460:50.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1021#Tissue=PVD OLLs (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 460 460_534DMM49-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1021#Tissue=PVD-OLLs-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_460:49.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1021#Tissue=PVD OLLs (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 460 460_PVD_OLL-49_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1021#Tissue=PVD-OLLs-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_460:PVD_OLL-49_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1021#Tissue=PVD OLLs (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_509DMM22-20080204-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_461:09DMM22-20080204.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_L2-ref-23_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:23_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_L2-reference_tars_maxgap30_minrun100_thresh9.34.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_L2-ref-21_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:21_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_534DMM21-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_461:34DMM21-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_509DMM23-20080204-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_461:09DMM23-20080204.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_L2-ref-22_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:22_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -461 461_L2-reference_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:erence_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_L2-panneural-4_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:4_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_L2-panneural_tars_maxgap30_minrun100_thresh6.42.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_L2-panneural-5_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:5_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_L2-panneural_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_534DMM05-20070723-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_462:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_534DMM04-20070723-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_462:4.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_L2-panneural-3_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:3_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -462 462_534DMM03-20070723-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Pan-neural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_462:3.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Pan-neural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_509DMM22-20080204-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_461:09DMM22-20080204.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_L2-ref-23_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:23_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_L2-reference_tars_maxgap30_minrun100_thresh9.34.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_L2-ref-21_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:21_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_534DMM21-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_461:34DMM21-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_509DMM23-20080204-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_461:09DMM23-20080204.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_L2-ref-22_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:22_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +461 461_L2-reference_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_461:erence_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_L2-panneural-4_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:4_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_L2-panneural_tars_maxgap30_minrun100_thresh6.42.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_L2-panneural-5_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:5_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_L2-panneural_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_534DMM05-20070723-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_462:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_534DMM04-20070723-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_462:4.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_L2-panneural-3_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_462:3_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +462 462_534DMM03-20070723-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1241#Tissue=Panneural-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_462:3.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1241#Tissue=Panneural (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 463 463_L2-intestine-54_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1084#Tissue=Intestine-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_463:54_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1084#Tissue=Intestine (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 463 463_534DMM53-20080118-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1084#Tissue=Intestine-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_463:53-20080118-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1084#Tissue=Intestine (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 463 463_L2-intestine-73_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1084#Tissue=Intestine-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_463:73_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1084#Tissue=Intestine (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -1634,14 +1634,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 464 464_534DMM88-20080424-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1598#Tissue=Excretory-cell-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_464:8.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1598#Tissue=Excretory cell (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 464 464_L2-excretory-89_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1598#Tissue=Excretory-cell-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_464:89_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1598#Tissue=Excretory cell (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 464 464_534DMM87-20080424-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1598#Tissue=Excretory-cell-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_464:7.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1598#Tissue=Excretory cell (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_L2-bwm-18_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:18_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_L2-bwm-19_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:19_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_L2-bwm_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_534DMM18-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_465:18-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_534DMM19-20071108-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_465:19-20071108-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_534DMM20-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_465:20-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_L2-bwm-20_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:20_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -465 465_L2-bwm_tars_maxgap30_minrun100_thresh7.60.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_L2-bwm-18_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:18_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_L2-bwm-19_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:19_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_L2-bwm_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_534DMM18-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_465:18-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_534DMM19-20071108-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_465:19-20071108-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_534DMM20-20070920-CET1.0.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_465:20-20070920-CET1.0.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_L2-bwm-20_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465:20_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +465 465_L2-bwm_tars_maxgap30_minrun100_thresh7.60.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=SD1075#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_465.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=SD1075#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 466 466_L2-GABA_neurons_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1627#Tissue=GABA-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_466:neurons_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1627#Tissue=GABA neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 466 466_509DMM26-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1627#Tissue=GABA-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_466:26-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1627#Tissue=GABA neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 466 466_L2-GABA-25_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1627#Tissue=GABA-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_466:25_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1627#Tissue=GABA neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -1650,14 +1650,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 466 466_509DMM32-20080227-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1627#Tissue=GABA-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_466:32-20080227.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1627#Tissue=GABA neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 466 466_L2-GABA-26_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1627#Tissue=GABA-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_466:26_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1627#Tissue=GABA neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 466 466_L2-GABA-32_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1627#Tissue=GABA-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_466:32_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1627#Tissue=GABA neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_emb-dop_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_534DMM108-20080731-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_467:08.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_534DMM110-20080731-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_467:10.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_emb-dop_tars_maxgap30_minrun100_thresh9.17.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_emb-dop-110_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:110_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_emb-dop-108_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:108_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_534DMM109-20080731-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_467:09.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -467 467_emb-dop-109_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:109_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_emb-dop_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_534DMM108-20080731-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_467:08.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_534DMM110-20080731-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_467:10.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_emb-dop_tars_maxgap30_minrun100_thresh9.17.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_emb-dop-110_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:110_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_emb-dop-108_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:108_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_534DMM109-20080731-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_467:09.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +467 467_emb-dop-109_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=BY200#Tissue=Dopaminergic-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_467:109_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=BY200#Tissue=Dopaminergic neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 468 468_534DMM97-20080619-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=CZ1200#Tissue=GABA-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_468:7.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=CZ1200#Tissue=GABA neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 468 468_emb-GABA-96_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=CZ1200#Tissue=GABA-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_468:96_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=CZ1200#Tissue=GABA neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 468 468_emb-GABA_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=CZ1200#Tissue=GABA-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_468:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=CZ1200#Tissue=GABA neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -1674,14 +1674,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 469 469_L2-A-class_tars_maxgap30_minrun100_thresh9.25.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC694#Tissue=L2-A-class#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_469.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC694#Tissue=L2-A-class#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 469 469_L2-A-class-106_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC694#Tissue=L2-A-class#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_469:106_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC694#Tissue=L2-A-class#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 469 469_L2-A-class-107_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC694#Tissue=L2-A-class#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_469:107_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC694#Tissue=L2-A-class#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_534DMM122-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_470:2.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_emb-bwm-v2_tars_maxgap30_minrun100_thresh8.65.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_emb-bwm-129_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:129_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_emb-bwm-122_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:122_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_emb-bwm-v2_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:v2_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_534DMM125-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_470:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_emb-bwm-125_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:125_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -470 470_534DMM129-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_470:9.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_534DMM122-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_470:2.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_emb-bwm-v2_tars_maxgap30_minrun100_thresh8.65.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_emb-bwm-129_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:129_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_emb-bwm-122_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:122_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_emb-bwm-v2_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:v2_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_534DMM125-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_470:5.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_emb-bwm-125_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_470:125_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +470 470_534DMM129-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=PD4251#Tissue=Body-wall-muscle#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_470:9.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=PD4251#Tissue=Body wall muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 472 472_JYOU_CTIL_L2-2DT_111507.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_472:2DT_1115.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 472 472_L2-2_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_472:2_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 472 472_L2_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_472:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -1736,14 +1736,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 478 478_MALE-8_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489):RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_478:8_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 478 478_MALE-2_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489):RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_478:2_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 478 478_MALE_tars_maxgap30_minrun100_thresh6.46.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489):RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_478.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_JYOU_CTIL_N2LE1_032008.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:1.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_JYOU_CTIL_N2LE2_032008.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:2.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_N2LE_tars_maxgap30_minrun100_thresh6.48.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_N2LE_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_JYOU_CTIL_N2LE3_032008.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:3.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_N2LE-1_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:1_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_N2LE-2_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:2_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -479 479_N2LE-3_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:3_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_JYOU_CTIL_N2LE1_032008.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:1.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_JYOU_CTIL_N2LE2_032008.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:2.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_N2LE_tars_maxgap30_minrun100_thresh6.48.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_N2LE_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_JYOU_CTIL_N2LE3_032008.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:3.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_N2LE-1_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:1_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_N2LE-2_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:2_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +479 479_N2LE-3_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_479:3_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 481 481_GON-6_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-42-hrs-post-L1-stage-larvae#Strain=N2#Tissue=Gonad:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_481:6_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 42 hr post-L1 stage larvae Developmental-Stage=Young Adult 42 hrs post-L1 stage larvae#Strain=N2#Tissue=Gonad Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 481 481_GON_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-42-hrs-post-L1-stage-larvae#Strain=N2#Tissue=Gonad:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_481:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 42 hr post-L1 stage larvae Developmental-Stage=Young Adult 42 hrs post-L1 stage larvae#Strain=N2#Tissue=Gonad Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 481 481_GON_tars_maxgap30_minrun100_thresh7.11.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-42-hrs-post-L1-stage-larvae#Strain=N2#Tissue=Gonad:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_481.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Young Adult 42 hr post-L1 stage larvae Developmental-Stage=Young Adult 42 hrs post-L1 stage larvae#Strain=N2#Tissue=Gonad Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -1825,36 +1825,36 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 514 514_Dro2_AS_Dm_emb_16h_OR_657.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Embryos-14-16-hr#Strain=Oregon-R:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_514.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr#Strain=Oregon-R Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 514 514_Dro2_AS_Dm_emb_16h_OR_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Embryos-14-16-hr#Strain=Oregon-R:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_514.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr#Strain=Oregon-R Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling 526 526_GSM280083.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Dcr-2L811fsX#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_526.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dcr-2L811fsX#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -538 538_Dro2_AS_Dm_L3-12hr_larvae_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_538.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -538 538_Dro2_AS_Dm_L3-12hr_larvae_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_538.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -538 538_Dro2_AS_Dm_L3-12hr_larvae_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_538.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -538 538_Dro2_AS_Dm_L3-12hr_larvae_875.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_538.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -538 538_Dro2_AS_Dm_L3-12hr_larvae_875.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_538.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -539 539_Dro2_AS_L3-larvae-clear_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_539.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -539 539_Dro2_AS_L3-larvae-clear_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_539.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -539 539_Dro2_AS_L3-larvae-clear_802.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_539.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -539 539_Dro2_AS_L3-larvae-clear_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_539.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -539 539_Dro2_AS_L3-larvae-clear_802.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_539.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -540 540_Dro2_AS_L3-larvae-light-blue_790.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_540.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -540 540_Dro2_AS_L3-larvae-light-blue_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_540.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -540 540_Dro2_AS_L3-larvae-light-blue_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_540.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -540 540_Dro2_AS_L3-larvae-light-blue_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_540.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -540 540_Dro2_AS_L3-larvae-light-blue_790.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_540.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -541 541_Dro2_AS_Dm_WPP+2days_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_541.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -541 541_Dro2_AS_Dm_WPP+2days_804.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_541.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -541 541_Dro2_AS_Dm_WPP+2days_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_541.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -541 541_Dro2_AS_Dm_WPP+2days_804.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_541.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -541 541_Dro2_AS_Dm_WPP+2days_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_541.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -542 542_Dro2_AS_Dm_WPP+3days_878.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_542.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -542 542_Dro2_AS_Dm_WPP+3days_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_542.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -542 542_Dro2_AS_Dm_WPP+3days_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_542.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -542 542_Dro2_AS_Dm_WPP+3days_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_542.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -542 542_Dro2_AS_Dm_WPP+3days_878.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_542.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -543 543_Dro2_AS_Dm_WPP+4days_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_543.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -543 543_Dro2_AS_Dm_WPP+4days_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_543.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -543 543_Dro2_AS_Dm_WPP+4days_879.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_543.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -543 543_Dro2_AS_Dm_WPP+4days_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_543.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -543 543_Dro2_AS_Dm_WPP+4days_879.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_543.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +538 538_Dro2_AS_Dm_L3-12hr_larvae_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_538.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +538 538_Dro2_AS_Dm_L3-12hr_larvae_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_538.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +538 538_Dro2_AS_Dm_L3-12hr_larvae_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_538.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +538 538_Dro2_AS_Dm_L3-12hr_larvae_875.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_538.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +538 538_Dro2_AS_Dm_L3-12hr_larvae_875.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_538.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +539 539_Dro2_AS_L3-larvae-clear_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_539.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +539 539_Dro2_AS_L3-larvae-clear_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_539.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +539 539_Dro2_AS_L3-larvae-clear_802.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_539.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +539 539_Dro2_AS_L3-larvae-clear_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_539.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +539 539_Dro2_AS_L3-larvae-clear_802.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_539.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +540 540_Dro2_AS_L3-larvae-light-blue_790.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_540.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +540 540_Dro2_AS_L3-larvae-light-blue_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_540.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +540 540_Dro2_AS_L3-larvae-light-blue_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_540.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +540 540_Dro2_AS_L3-larvae-light-blue_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_540.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +540 540_Dro2_AS_L3-larvae-light-blue_790.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_540.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +541 541_Dro2_AS_Dm_WPP+2days_RW_C01_B1_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_541.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +541 541_Dro2_AS_Dm_WPP+2days_804.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_541.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +541 541_Dro2_AS_Dm_WPP+2days_RW_C01_B2_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_541.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +541 541_Dro2_AS_Dm_WPP+2days_804.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_541.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +541 541_Dro2_AS_Dm_WPP+2days_RW_C01_B3_T1.CEL.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_541.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +542 542_Dro2_AS_Dm_WPP+3days_878.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_542.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +542 542_Dro2_AS_Dm_WPP+3days_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_542.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +542 542_Dro2_AS_Dm_WPP+3days_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_542.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +542 542_Dro2_AS_Dm_WPP+3days_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_542.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +542 542_Dro2_AS_Dm_WPP+3days_878.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_542.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +543 543_Dro2_AS_Dm_WPP+4days_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_543.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +543 543_Dro2_AS_Dm_WPP+4days_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_543.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +543 543_Dro2_AS_Dm_WPP+4days_879.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_543.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +543 543_Dro2_AS_Dm_WPP+4days_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_543.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +543 543_Dro2_AS_Dm_WPP+4days_879.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_543.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 544 544_Dro2_AS_Dm_WPP+12hr_876.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-12-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_544.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 12 hr Developmental-Stage=White prepupae (WPP) + 12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 544 544_Dro2_AS_Dm_WPP+12hr_876.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-12-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_544.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 12 hr Developmental-Stage=White prepupae (WPP) + 12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 544 544_Dro2_AS_Dm_WPP+12hr_RW_C01_B3_T1.cel.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-12-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_544.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA White prepupae (WPP) + 12 hr Developmental-Stage=White prepupae (WPP) + 12 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling @@ -2004,19 +2004,19 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 597 597_B3.3_gro-aviva.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_597:B3.3_gro-aviva.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 597 597_S_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_597:S_B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 597 597_A2__GRO.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_597.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-3 Dmel_r5.32 White, K. TF binding sites -599 599_CVMMS126R_8WG16_N2_L4_1_119906A03_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_599:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_2A_12353001_IP_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_1_119906A01_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_599:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_1_119906A01_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_599:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_2B.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_599.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_1_119906A02_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_599:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_1_119906A02_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_599:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_599.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_2A_12353001_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_2B_12427801_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_2B_12427801_IP_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_1_119906A03_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_599:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -599 599_CVMMS126R_8WG16_N2_L4_2A.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_599.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1_119906A03_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_599:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_2A_12353001_IP_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1_119906A01_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_599:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1_119906A01_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_599:1.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_2B.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_599.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1_119906A02_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_599:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1_119906A02_IP_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_599:2.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_599.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_2A_12353001_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_2B_12427801_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_2B_12427801_IP_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_599.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_1_119906A03_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_599:3.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +599 599_CVMMS126R_8WG16_N2_L4_2A.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_599.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 601 601_MAT_snr1_Pupae.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle SNR1:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_601.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip SNR1 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites 601 601_snr_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL SNR1:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_601.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip SNR1 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. TF binding sites 601 601_MAT_snr1_Pupae.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 SNR1:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_601.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip SNR1 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites @@ -2045,30 +2045,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 604 604_A1_ZFH1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ZFH1:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_604.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ZFH1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-2 Dmel_r5.32 White, K. TF binding sites 604 604_B1_ZFH1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ZFH1:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_604.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ZFH1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-3 Dmel_r5.32 White, K. TF binding sites 604 604_84.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ZFH1:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_604.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ZFH1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -605 605_MAT_INV7657_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_605.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -605 605_57.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_605.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -605 605_B2_7657.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_605.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -605 605_MAT_INV7657_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_605.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -605 605_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_605:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -605 605_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_605:B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -605 605_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_605:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -605 605_0-12h_7657.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_605.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_KW_Input_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_606:2.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_dll_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_606.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -606 606_dll_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_606.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_KW_Input_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_606:1.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_KW_Input_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_606:3.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_MAT_dll_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_606.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_MAT_dll_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_606.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -606 606_dll_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_606.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -607 607_MAT_dCtBP7667_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_607.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -607 607_B2_7667.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_607.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -607 607_B2_Mock_5.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_607:B2_Mock_5.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -607 607_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_607:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -607 607_B2_7667_5.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_607.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -607 607_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_607:B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -607 607_MAT_dCtBP7667_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_607.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -607 607_67.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cbp:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_607.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cbp Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +605 605_MAT_INV7657_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_605.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +605 605_57.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_605.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +605 605_B2_7657.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_605.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +605 605_MAT_INV7657_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_605.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +605 605_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_605:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +605 605_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_605:B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +605 605_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_605:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +605 605_0-12h_7657.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_605.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_KW_Input_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_606:2.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_dll_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_606.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +606 606_dll_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_606.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_KW_Input_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_606:1.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_KW_Input_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_606:3.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_MAT_dll_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_606.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_MAT_dll_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_606.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +606 606_dll_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL DLL:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_606.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip DLL Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +607 607_MAT_dCtBP7667_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_607.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +607 607_B2_7667.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_607.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +607 607_B2_Mock_5.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_607:B2_Mock_5.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +607 607_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_607:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +607 607_B2_7667_5.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_607.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +607 607_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_607:B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +607 607_MAT_dCtBP7667_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_607.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +607 607_67.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL CtBP:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_607.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip CtBP Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites 608 608_chimmo_2_10.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL chinmo:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_608.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip chinmo Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-3 Dmel_r5.32 White, K. TF binding sites 608 608_input_0-12h_16.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL chinmo:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_608:input_0-12h_16.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip chinmo Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 608 608_MAT_chinmo_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle chinmo:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_608.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip chinmo Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites @@ -2076,14 +2076,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 608 608_chinmo_E-0-12h_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 chinmo:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_608.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip chinmo Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 608 608_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL chinmo:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_608:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip chinmo Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 608 608_chimmo_1_9.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL chinmo:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_608.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip chinmo Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -609 609_MAT_bks_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_609.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -609 609_KW_Input_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_609:2.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -609 609_bks_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_609.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -609 609_MAT_bks_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_609.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -609 609_bks_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_609.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -609 609_KW_Input_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_609:1.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -609 609_bks_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_609.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -609 609_KW_Input_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_609:3.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +609 609_MAT_bks_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_609.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +609 609_KW_Input_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_609:2.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +609 609_bks_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_609.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +609 609_MAT_bks_E-0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_609.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +609 609_bks_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_609.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +609 609_KW_Input_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_609:1.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +609 609_bks_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_609.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +609 609_KW_Input_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_609:3.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites 610 610_input_7-24h_15.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GSBN:Developmental-Stage=Embryos-7-24-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_610.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GSBN Embryos 7-24 hr Developmental-Stage=Embryos 7-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 610 610_MAT_gsbnpurif_E7-24h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle GSBN:Developmental-Stage=Embryos-7-24-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_610.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip GSBN Embryos 7-24 hr Developmental-Stage=Embryos 7-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 610 610_gsbn_2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GSBN:Developmental-Stage=Embryos-7-24-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_610.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GSBN Embryos 7-24 hr Developmental-Stage=Embryos 7-24 hr Rep-2 Dmel_r5.32 White, K. TF binding sites @@ -2112,123 +2112,123 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 613 613_MAT_UBX1_E3-8h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle UBX:Developmental-Stage=Embryos-3-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_613.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 3-8 hr Developmental-Stage=Embryos 3-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 613 613_Input_A_3-8h.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-3-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_613:Input_A_3-8h.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 3-8 hr Developmental-Stage=Embryos 3-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 613 613_MAT_UBX1_E3-8h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 UBX:Developmental-Stage=Embryos-3-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_613.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 3-8 hr Developmental-Stage=Embryos 3-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -614 614_input_0-12h_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_614:input_0-12h_3%.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -614 614_A1_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_614:A1_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -614 614_A1_7701.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_614.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -614 614_B3.2_7701.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_614.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -614 614_MAT_UBX7701_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_614.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -614 614_MAT_UBX7701_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_614.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -614 614_7701.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_614.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -614 614_B3.2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_614:B3.2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -615 615_MAT_TTK_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_615.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -615 615_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_615:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -615 615_A1_TTK.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_615.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -615 615_91.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_615.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -615 615_B1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_615:B1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -615 615_B1_TTK.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_615.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -615 615_S_A1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_615:S_A1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -615 615_MAT_TTK_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_615.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -616 616_MAT_Stat92E_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_616.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -616 616_stat_92E_1_7.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_616.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -616 616_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_616:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -616 616_MAT_Stat92E_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_616.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -616 616_input_0-12h_16.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_616:input_0-12h_16.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -616 616_0-12h_stat_92E.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_616.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -616 616_stat_92E_28.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_616.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -617 617_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_617:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -617 617_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_617:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -617 617_0-12h_7659.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_617.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -617 617_MAT_RUN7659_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_617.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -617 617_B2_7659.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_617.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -617 617_MAT_RUN7659_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_617.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -617 617_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_617:B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -617 617_59.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_617.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -618 618_S_A1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_618:S_A1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -618 618_94.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_618.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -618 618_B1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_618:B1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -618 618_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_618:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -618 618_B1_KN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_618.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -618 618_MAT_KN_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_618.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -618 618_MAT_KN_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_618.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -618 618_A1_KN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_618.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -619 619_INV_GFP_input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL inv:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip inv Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -619 619_INV_GFP_R1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL inv:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip inv Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -619 619_MAT_INVGFP_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 inv:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_619.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip inv Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -619 619_INV_GFP_R2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL inv:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip inv Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-2 Dmel_r5.32 White, K. TF binding sites -619 619_INV_GFP_R3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL inv:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip inv Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-3 Dmel_r5.32 White, K. TF binding sites -619 619_MAT_INVGFP_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle inv:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_619.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip inv Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -620 620_KW_Input_2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_620:2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -620 620_KW_Input_1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_620:1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -620 620_K36_3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_620.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -620 620_MAT_H3K36me3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_620.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -620 620_MAT_H3K36me3_E0-12h.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_620.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -620 620_KW_Input_3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_620:3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -620 620_K36_2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_620.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. Histone modification and replacement -620 620_K36_1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_620.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -621 621_MAT_H3K9me3_E0-12h.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_621.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -621 621_A1_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -621 621_A2_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. Histone modification and replacement -621 621_Input_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -621 621_A3_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -621 621_MAT_H3K9me3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_621.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -622 622_MAT_H3K4me3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_622.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -622 622_C2_Mock2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_622:C2_Mock2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -622 622_C2_H3K4Me32.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_622.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -622 622_C2_Mock1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_622:C2_Mock1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -622 622_A2_H3K4me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_622.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -622 622_MAT_H3K4me3_E0-12h.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_622.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -622 622_C2_H3K4Me31.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_622.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. Histone modification and replacement -622 622_A2_Mock.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_622:A2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -623 623_MAT_Gro3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle GRO:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_623.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip GRO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -623 623_Input_3%_gro.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GRO:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GRO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -623 623_A1_gro_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GRO:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GRO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -623 623_MAT_Gro3_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 GRO:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_623.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip GRO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -623 623_A3_gro_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GRO:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GRO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -623 623_A2_gro_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GRO:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GRO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -624 624_MAT_FTZ-F1_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_624.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -624 624_ftz-f1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_624.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -624 624_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_624:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -624 624_A1_ftz_f1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_624.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -624 624_B1_ftz_f1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_624.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -624 624_B1_Mock_S.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_624:B1_Mock_S.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -624 624_MAT_FTZ-F1_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_624.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -624 624_A1_Mock_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_624:A1_Mock_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_5_K-M.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:5_K-M.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_MAT_ENserum_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_625.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_MAT_ENserum_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_625.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_A1_EN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_625.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -625 625_7_K-EN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_625.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -625 625_3_LM-EN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_625.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_2_LM-_MOCK.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:2_LM-_MOCK.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_A1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:A1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -625 625_1_LM-IPUT.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:1_LM-IPUT.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_S_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:S_B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_S_A2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:S_A2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_sD.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_626:s.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_MAT_D_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_626.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_MAT_D_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_626.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_2-4-09-Input_0-12h_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:2-4-09-Input_0-12h_3%.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_A2__D.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_626.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -626 626_2-4-09-D.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_626:2-4-09-.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -626 626_B2_D.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_626.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -627 627_S_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:S_B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_A2_CNC.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_627:A2_CNC.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_B2_CNC.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_627.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -627 627_MAT_CNC_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_627.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_S_A2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:S_A2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_cnc.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_627:cnc.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_MAT_CNC_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_627.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -627 627_c_nc.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_627.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -627 627_input_0-12h_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:input_0-12h_3%.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -628 628_bab_I_8.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_628.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-3 Dmel_r5.32 White, K. TF binding sites -628 628_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_628:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -628 628_MAT_bab1_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_628.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -628 628_0-12h_bab_1_R1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_628.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -628 628_Input_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_628:Input_1.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites -628 628_0-12h_bab_1_R2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_628.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-2 Dmel_r5.32 White, K. TF binding sites -628 628_MAT_bab1_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_628.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +614 614_input_0-12h_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_614:input_0-12h_3%.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +614 614_A1_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_614:A1_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +614 614_A1_7701.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_614.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +614 614_B3.2_7701.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_614.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +614 614_MAT_UBX7701_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_614.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +614 614_MAT_UBX7701_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_614.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +614 614_7701.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_614.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +614 614_B3.2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL UBX:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_614:B3.2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip UBX Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +615 615_MAT_TTK_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_615.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +615 615_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_615:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +615 615_A1_TTK.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_615.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +615 615_91.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_615.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +615 615_B1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_615:B1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +615 615_B1_TTK.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_615.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +615 615_S_A1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_615:S_A1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +615 615_MAT_TTK_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle TRAMTRACK:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_615.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip TRAMTRACK Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +616 616_MAT_Stat92E_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_616.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +616 616_stat_92E_1_7.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_616.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +616 616_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_616:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +616 616_MAT_Stat92E_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_616.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +616 616_input_0-12h_16.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_616:input_0-12h_16.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +616 616_0-12h_stat_92E.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_616.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +616 616_stat_92E_28.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Stat92E:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_616.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Stat92E Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +617 617_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_617:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +617 617_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_617:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +617 617_0-12h_7659.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_617.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +617 617_MAT_RUN7659_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_617.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +617 617_B2_7659.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_617.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +617 617_MAT_RUN7659_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_617.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +617 617_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_617:B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +617 617_59.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL RUNT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_617.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip RUNT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +618 618_S_A1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_618:S_A1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +618 618_94.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_618.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +618 618_B1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_618:B1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +618 618_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_618:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +618 618_B1_KN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_618.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +618 618_MAT_KN_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_618.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +618 618_MAT_KN_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_618.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +618 618_A1_KN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL KNOT:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_618.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip KNOT Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +619 619_INV_GFP_input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +619 619_INV_GFP_R1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +619 619_MAT_INVGFP_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Invected:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_619.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +619 619_INV_GFP_R2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-2 Dmel_r5.32 White, K. TF binding sites +619 619_INV_GFP_R3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Invected:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_619.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-3 Dmel_r5.32 White, K. TF binding sites +619 619_MAT_INVGFP_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Invected:Developmental-Stage=Embryos-0-12-hr#Strain=INV-GFP:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_619.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Invected Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=INV-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +620 620_KW_Input_2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_620:2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +620 620_KW_Input_1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_620:1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +620 620_K36_3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_620.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +620 620_MAT_H3K36me3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_620.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +620 620_MAT_H3K36me3_E0-12h.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_620.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +620 620_KW_Input_3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_620:3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +620 620_K36_2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_620.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +620 620_K36_1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_620.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +621 621_MAT_H3K9me3_E0-12h.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_621.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +621 621_A1_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +621 621_A2_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +621 621_Input_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +621 621_A3_K9Me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_621.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +621 621_MAT_H3K9me3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_621.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +622 622_MAT_H3K4me3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_622.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +622 622_C2_Mock2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_622:C2_Mock2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +622 622_C2_H3K4Me32.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_622.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +622 622_C2_Mock1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_622:C2_Mock1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +622 622_A2_H3K4me3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_622.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +622 622_MAT_H3K4me3_E0-12h.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_622.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +622 622_C2_H3K4Me31.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_622.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +622 622_A2_Mock.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_622:A2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +623 623_MAT_Gro3_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle GROUCHO:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_623.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +623 623_Input_3%_gro.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +623 623_A1_gro_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +623 623_MAT_Gro3_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 GROUCHO:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_623.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +623 623_A3_gro_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +623 623_A2_gro_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GROUCHO:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_623.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GROUCHO Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +624 624_MAT_FTZ-F1_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_624.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +624 624_ftz-f1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_624.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +624 624_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_624:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +624 624_A1_ftz_f1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_624.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +624 624_B1_ftz_f1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_624.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +624 624_B1_Mock_S.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_624:B1_Mock_S.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +624 624_MAT_FTZ-F1_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_624.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +624 624_A1_Mock_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL FTZ-F1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_624:A1_Mock_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip FTZ-F1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_5_K-M.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:5_K-M.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_MAT_ENserum_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_625.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_MAT_ENserum_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_625.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_A1_EN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_625.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +625 625_7_K-EN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_625.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +625 625_3_LM-EN.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_625.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_2_LM-_MOCK.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:2_LM-_MOCK.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_A1_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:A1_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +625 625_1_LM-IPUT.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL ENGRAILED:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_625:1_LM-IPUT.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip ENGRAILED Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_S_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:S_B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_S_A2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:S_A2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_sD.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_626:s.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_MAT_D_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_626.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_MAT_D_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_626.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_2-4-09-Input_0-12h_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_626:2-4-09-Input_0-12h_3%.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_A2__D.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_626.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +626 626_2-4-09-D.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_626:2-4-09-.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +626 626_B2_D.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Dichaete:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_626.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Dichaete Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +627 627_S_B2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:S_B2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_A2_CNC.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_627:A2_CNC.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_B2_CNC.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_627.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +627 627_MAT_CNC_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_627.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_S_A2_Mock.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:S_A2_Mock.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_cnc.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_627:cnc.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_I.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:I.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_MAT_CNC_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_627.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +627 627_c_nc.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_627.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +627 627_input_0-12h_3%.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL cnc:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_627:input_0-12h_3%.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip cnc Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +628 628_bab_I_8.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_628.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-3 Dmel_r5.32 White, K. TF binding sites +628 628_0-12h_Input.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_628:0-12h_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +628 628_MAT_bab1_E0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_628.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +628 628_0-12h_bab_1_R1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_628.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +628 628_Input_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_628:Input_1.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites +628 628_0-12h_bab_1_R2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_628.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-2 Dmel_r5.32 White, K. TF binding sites +628 628_MAT_bab1_E0-12h.bed_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 BAB-1:Developmental-Stage=Embryos-0-12-hr#Tissue=Embryo:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_628.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip BAB-1 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Tissue=Embryo Rep-1 Dmel_r5.32 White, K. TF binding sites 630 630_JL00001_DPY27_N2_L4_2B_12427501_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_630.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 630 630_JL00001_DPY27_N2_L4_3.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle DPY-27:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_630:3.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 630 630_JL00001_DPY27_N2_L4_1_13238301_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_630:1_13238301_IN.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -2241,9 +2241,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 630 630_JL00001_DPY27_N2_L4_2A.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle DPY-27:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_630.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 630 630_JL00001_DPY27_N2_L4_3_13238601_IP_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_630:3_13238601_IP.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 630 630_JL00001_DPY27_N2_L4_2B.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle DPY-27:Developmental-Stage=Larvae-L4-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_630.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Larvae L4 stage Developmental-Stage=Larvae L4 stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -633 633_Kc167-4_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -633 633_SRR015088.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_633.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -633 633_Kc167-2_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +633 633_Kc167-4_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +633 633_SRR015088.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_633.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +633 633_Kc167-2_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 634 634_Egg_s_3.S-3.WS220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_634.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure 634 634_SRR014966.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_634.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure 635 635_L1_s_5.S-3.WS220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_635.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -2280,24 +2280,24 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 645 645_SDQ3146_SDC2_N2_MXemb_2_14437201_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_645.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 645 645_SDQ3146_SDC2_N2_MXemb_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SDC-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_645.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip SDC-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 645 645_SDQ3148_SDC2_N2_MXemb_1_14433601_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_645.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -650 650_S2-DRSC-14_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_650.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -650 650_S2-DRSC-16_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_650.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -650 650_SRR015108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_650.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +650 650_S2-DRSC-14_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_650.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +650 650_S2-DRSC-16_PE_RNA-Seq.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_650.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +650 650_SRR015108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_650.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 651 651_ML-DmBG3-c2-124.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_651.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 651 651_SRR015100.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 651 651_ML-DmBG3-c2-122.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_651.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -652 652_CME_W1_Cl.8-62.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_652.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -652 652_SRR015074.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_652.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -652 652_CME_W1_Cl.8-60.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_652.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -652 652_SRR015082.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_652.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -654 654_emb-A-class_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_emb-A-class-130_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:130_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_emb-A-class-128_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:128_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_emb-A-class-137_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:137_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_534DMM137-20081203-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_654:37-20081203-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_534DMM130-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_654:30-20081023-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_534DMM128-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_654:28-20081023-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -654 654_emb-A-class_tars_maxgap30_minrun100_thresh8.81.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +652 652_CME_W1_Cl.8-62.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_652.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +652 652_SRR015074.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_652.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +652 652_CME_W1_Cl.8-60.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_652.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +652 652_SRR015082.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_652.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +654 654_emb-A-class_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_emb-A-class-130_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:130_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_emb-A-class-128_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:128_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_emb-A-class-137_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654:137_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_534DMM137-20081203-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_654:37-20081203-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_534DMM130-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_654:30-20081023-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_534DMM128-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_654:28-20081023-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +654 654_emb-A-class_tars_maxgap30_minrun100_thresh8.81.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC300#Tissue=Unc-4-neurons-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_654.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC300#Tissue=Unc-4 neurons (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 655 655_L3-L4-dop-168_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1700#Tissue=Dopaminergic-neurons-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_655:168_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1700#Tissue=Dopaminergic neurons (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 655 655_L3-L4-dop-167_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1700#Tissue=Dopaminergic-neurons-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_655:167_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1700#Tissue=Dopaminergic neurons (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 655 655_534DMM0148-20090106-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1700#Tissue=Dopaminergic-neurons-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_655:48-20090106.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1700#Tissue=Dopaminergic neurons (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -2306,14 +2306,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 655 655_L3-L4-dop_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1700#Tissue=Dopaminergic-neurons-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_655:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1700#Tissue=Dopaminergic neurons (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 655 655_534DMM0167-20090319-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1700#Tissue=Dopaminergic-neurons-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_655:67-20090319.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1700#Tissue=Dopaminergic neurons (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 655 655_534DMM0168-20090319-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1700#Tissue=Dopaminergic-neurons-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_655:68-20090319.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1700#Tissue=Dopaminergic neurons (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_534DMM0172-20090402-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_656:2-20090402.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_534DMM0174-20090413-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_656:4-20090413.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_YA-ref-173_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:173_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_YA-ref_tars_maxgap30_minrun100_thresh9.66.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_YA-ref_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_YA-ref-172_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:172_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_534DMM0173-20090402-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_656:3-20090402.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -656 656_YA-ref-174_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:174_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_534DMM0172-20090402-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_656:2-20090402.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_534DMM0174-20090413-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_656:4-20090413.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_YA-ref-173_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:173_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_YA-ref_tars_maxgap30_minrun100_thresh9.66.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_YA-ref_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_YA-ref-172_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:172_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_534DMM0173-20090402-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_656:3-20090402.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +656 656_YA-ref-174_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_656:174_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 657 657_L2-coelomocytes-119_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1668#Tissue=Coelomocytes-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_657:119_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1668#Tissue=Coelomocytes (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 657 657_534DMM118-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1668#Tissue=Coelomocytes-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_657:118-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1668#Tissue=Coelomocytes (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 657 657_L2-coelomocytes_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1668#Tissue=Coelomocytes-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_657:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1668#Tissue=Coelomocytes (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -2330,14 +2330,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 658 658_L2-glr-189_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1842#Tissue=Glutamate-receptor-expressing-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_658:189_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1842#Tissue=Glutamate receptor expressing neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 658 658_534DMM0189-20090603-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1842#Tissue=Glutamate-receptor-expressing-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_658:89-2009060.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1842#Tissue=Glutamate receptor expressing neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 658 658_L2-glr-188_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mid-L2-22-hr-post-L1-stage-larvae#Strain=NC1842#Tissue=Glutamate-receptor-expressing-neurons-(L2)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_658:188_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mid-L2 22 hr post-L1 stage larvae Developmental-Stage=Mid-L2 22 hr post-L1 stage larvae#Strain=NC1842#Tissue=Glutamate receptor expressing neurons (L2)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_L3-L4-reference_tars_maxgap30_minrun100_thresh8.52.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_534DMM116-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_659:116-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_534DMM0138-20090319-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_659:0138-20090319.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_L3-L4-ref-116_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:116_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_L3-L4-reference_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:erence_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_534DMM117-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_659:117-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_L3-L4-ref-117_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:117_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -659 659_L3-L4-ref-138_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:138_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_L3-L4-reference_tars_maxgap30_minrun100_thresh8.52.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_534DMM116-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_659:116-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_534DMM0138-20090319-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_659:0138-20090319.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_L3-L4-ref-116_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:116_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_L3-L4-reference_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:erence_smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_534DMM117-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_659:117-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_L3-L4-ref-117_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:117_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +659 659_L3-L4-ref-138_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=N2#Tissue=Reference-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_659:138_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=N2#Tissue=Reference (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 660 660_534DMM0171-20090326-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=OS3991#Tissue=CEPsh-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_660:71-20090326-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=OS3991#Tissue=CEPsh (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 660 660_YA-CEPsh-171_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=OS3991#Tissue=CEPsh-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_660:171_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=OS3991#Tissue=CEPsh (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 660 660_YA-CEPsh_tars_maxgap30_minrun100_thresh8.38.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=OS3991#Tissue=CEPsh-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_660.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=OS3991#Tissue=CEPsh (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling @@ -2346,46 +2346,46 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 660 660_534DMM0170-20090326-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=OS3991#Tissue=CEPsh-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_660:70-20090326-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=OS3991#Tissue=CEPsh (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 660 660_YA-CEPsh-169_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=OS3991#Tissue=CEPsh-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_660:169_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=OS3991#Tissue=CEPsh (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 660 660_YA-CEPsh_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Young-Adult-72-hr-post-L1-stage-larvae#Strain=OS3991#Tissue=CEPsh-(YA)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_660:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Young Adult 72 hr post-L1 stage larvae Developmental-Stage=Young Adult 72 hr post-L1 stage larvae#Strain=OS3991#Tissue=CEPsh (YA)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_534DMM133-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_661:3-20081023-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_emb-GLP-135_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:135_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_emb-GLP_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_emb-GLP_tars_maxgap30_minrun100_thresh7.83.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_534DMM136-20081203-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_661:6-20081203-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_emb-GLP-136_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:136_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_534DMM135-20081203-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_661:5-20081203-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -661 661_emb-GLP-133_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:133_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_emb-hypodermis-115_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:115_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_emb-hypodermis_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_534DMM114-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_662:14-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_emb-hypodermis-123_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:123_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_emb-hypodermis_tars_maxgap30_minrun100_thresh7.75.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_emb-hypodermis-114_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:114_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_534DMM123-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_662:23-20081023.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -662 662_534DMM115-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_662:15-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -663 663_ABAB817_8WG16_N2_EEMB_2_13860001_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_1_11763401_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_3_OID18184.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_663.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_663.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_3_OID18184_14640001_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_1_11763401_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_663.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_2_13860001_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -663 663_ABAB817_8WG16_N2_EEMB_3_OID18184_14640001_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -668 668_Kc_timing.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_668.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -669 669_S2_timing.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_669.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +661 661_534DMM133-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_661:3-20081023-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_emb-GLP-135_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:135_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_emb-GLP_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_emb-GLP_tars_maxgap30_minrun100_thresh7.83.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_534DMM136-20081203-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_661:6-20081203-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_emb-GLP-136_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:136_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_534DMM135-20081203-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_661:5-20081203-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +661 661_emb-GLP-133_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=SS747#Tissue=Germ-line-precursor-(embryonic)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_661:133_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=SS747#Tissue=Germ line precursor (embryonic)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_emb-hypodermis-115_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:115_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_emb-hypodermis_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_534DMM114-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_662:14-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_emb-hypodermis-123_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:123_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_emb-hypodermis_tars_maxgap30_minrun100_thresh7.75.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_emb-hypodermis-114_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_662:114_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_534DMM123-20081023-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_662:23-20081023.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +662 662_534DMM115-20080911-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_662:15-20080911.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=DM8001#Tissue=Hypodermis#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +663 663_ABAB817_8WG16_N2_EEMB_2_13860001_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_1_11763401_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_3_OID18184.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_663.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_663.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_3_OID18184_14640001_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_1_11763401_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_663.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_2_13860001_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +663 663_ABAB817_8WG16_N2_EEMB_3_OID18184_14640001_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_663.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +668 668_Kc_timing.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_668.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +669 669_S2_timing.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_669.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 670 670_Bg3_timing.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_670.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -674 674_orc_pair_exp1_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -674 674_orc_pair_exp2_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -674 674_orc_pair_exp2_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -674 674_orc_pair_exp1_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -674 674_orc_meta_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_674.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -674 674_orc_meta_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_674.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -675 675_mcm_pair_exp1_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -675 675_mcm_pair_exp1_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -675 675_mcm_pair_exp2_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -675 675_mcm_meta_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_675.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -675 675_mcm_pair_exp2_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -675 675_mcm_meta_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_675.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +674 674_orc_pair_exp1_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +674 674_orc_pair_exp2_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +674 674_orc_pair_exp2_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +674 674_orc_pair_exp1_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_674.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +674 674_orc_meta_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_674.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +674 674_orc_meta_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_674.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +675 675_mcm_pair_exp1_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +675 675_mcm_pair_exp1_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +675 675_mcm_pair_exp2_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +675 675_mcm_meta_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_675.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +675 675_mcm_pair_exp2_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_675.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +675 675_mcm_meta_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_675.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 691 691_UP07442_H3K9ME3_N2_EEMB_2_OID18184_14631501_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_691.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 691 691_UP07442_H3K9ME3_N2_EEMB_2.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_691.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 691 691_UP07442_H3K9ME3_N2_EEMB_3_OID18184_14631801_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_691.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement @@ -2422,10 +2422,10 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 701 701_JL00002_SDC3_YPT47_MXemb_2_230122_IN_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-3:Developmental-Stage=Mixed-Embryos#Strain=YPT47#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_701.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-3 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=YPT47#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 701 701_JL00002_SDC3_YPT47_MXemb_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SDC-3:Developmental-Stage=Mixed-Embryos#Strain=YPT47#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_701.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip SDC-3 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=YPT47#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 701 701_JL00002_SDC3_YPT47_MXemb_1_2539102_IN_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair SDC-3:Developmental-Stage=Mixed-Embryos#Strain=YPT47#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_701.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip SDC-3 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=YPT47#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -709 709_Kc_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/DNA-tiling-array/computed-peaks_gff3 Replication-Origin:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_709.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -709 709_Kc_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Origin:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_709.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -710 710_S2_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/DNA-tiling-array/computed-peaks_gff3 Replication-Origin:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_710.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -710 710_S2_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Origin:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_710.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +709 709_Kc_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/DNA-tiling-array/computed-peaks_gff3 Replication-Origin:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_709.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +709 709_Kc_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Origin:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_709.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +710 710_S2_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/DNA-tiling-array/computed-peaks_gff3 Replication-Origin:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_710.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +710 710_S2_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Origin:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_710.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 711 711_Bg3_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/DNA-tiling-array/normalized-arrayfile_wiggle Replication-Origin:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_711.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 711 711_Bg3_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/DNA-tiling-array/computed-peaks_gff3 Replication-Origin:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_711.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication DNA-tiling-array Replication-Origin Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 712 712_13.5.bowtie.out.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mixed-Adult-7-11-day#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_712:13.5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Mixed Adult 7-11 day Developmental-Stage=Mixed Adult 7-11 day#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -2441,27 +2441,27 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 713 713_Dro2_AS_MLDmBG3-c2_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_713.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 713 713_Dro2_AS_MLDmBG3-c2_PolyA+_899.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_713.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 713 713_Dro2_AS_MLDmBG3-c2_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_713.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -715 715_Dro2_AS_S2-DRSC_nuclear_898.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_715.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -715 715_Dro2_AS_S2-DRSC_nuclear_898.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_715.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -715 715_Dro2_AS_S2-DRSC_RNu_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_715.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -715 715_Dro2_AS_S2-DRSC_RNu_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_715.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -715 715_Dro2_AS_S2-DRSC_RNu_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_715.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +715 715_Dro2_AS_S2-DRSC_nuclear_898.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_715.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +715 715_Dro2_AS_S2-DRSC_nuclear_898.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_715.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +715 715_Dro2_AS_S2-DRSC_RNu_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_715.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +715 715_Dro2_AS_S2-DRSC_RNu_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_715.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +715 715_Dro2_AS_S2-DRSC_RNu_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_715.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 716 716_Dro2_AS_MLDmBG3-c2_nuclear_926.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_716.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 716 716_Dro2_AS_MLDmBG3-c2_nuclear_926.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_716.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 716 716_Dro2_AS_MLDmBG3-c2_RNu_C01_B3_T1.cel.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_716.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling 716 716_Dro2_AS_MLDmBG3-c2_RNu_C01_B2_T1.cel.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_716.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling 716 716_Dro2_AS_MLDmBG3-c2_RNu_C01_B1_T1.cel.bz2.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_716.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -717 717_Dro2_AS_C1.8_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_717.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -717 717_Dro2_AS_C1.8_PolyA+_927.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_717.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -717 717_Dro2_AS_C1.8_PolyA+_927.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_717.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -717 717_Dro2_AS_C1.8_RWP+_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_717.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -717 717_Dro2_AS_C1.8_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_717.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -718 718_Dro2_AS_S2-DRSC_PolyA+_897.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_718.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -718 718_Dro2_AS_S2-DRSC_RWP+_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_718.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -718 718_Dro2_AS_S2-DRSC_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_718.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -718 718_Dro2_AS_S2-DRSC_PolyA+_897.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_718.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -718 718_Dro2_AS_S2-DRSC_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_718.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -725 725_cgh_s2.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Embryos-0-4-hr#Strain=w1118#Tissue=embryo-derived-cell-line:CGH:Rep-1::Dmel_r5.32:modENCODE_725.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Cell-Line=S2-DRSC#Developmental-Stage=Embryos 0-4 hr#Strain=w1118#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +717 717_Dro2_AS_C1.8_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_717.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +717 717_Dro2_AS_C1.8_PolyA+_927.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_717.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +717 717_Dro2_AS_C1.8_PolyA+_927.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_717.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +717 717_Dro2_AS_C1.8_RWP+_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_717.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +717 717_Dro2_AS_C1.8_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_717.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +718 718_Dro2_AS_S2-DRSC_PolyA+_897.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_718.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +718 718_Dro2_AS_S2-DRSC_RWP+_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_718.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +718 718_Dro2_AS_S2-DRSC_RWP+_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_718.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +718 718_Dro2_AS_S2-DRSC_PolyA+_897.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_718.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +718 718_Dro2_AS_S2-DRSC_RWP+_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_718.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +725 725_cgh_s2.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Embryos-0-4-hr#Strain=w1118#Tissue=Embryo-derived-cell-line:CGH:Rep-1::Dmel_r5.32:modENCODE_725.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Cell-Line=S2-DRSC#Developmental-Stage=Embryos 0-4 hr#Strain=w1118#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation 734 734_Snyder_CEH-14_GFP_L2_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-14:Developmental-Stage=Larvae-L2-stage#Strain=OP73#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_734.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-14 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP73#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 734 734_Snyder_CEH-14_GFP_L2_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-14:Developmental-Stage=Larvae-L2-stage#Strain=OP73#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_734.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-14 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP73#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 734 734_Snyder_CEH-14_GFP_L2_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-14:Developmental-Stage=Larvae-L2-stage#Strain=OP73#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_734:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-14 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP73#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -2471,14 +2471,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 734 734_SRR032439.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-14:Developmental-Stage=Larvae-L2-stage#Strain=OP73#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_734.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-14 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP73#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 734 734_Snyder_CEH-14_Input_L2_unmerged.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-14:Developmental-Stage=Larvae-L2-stage#Strain=OP73#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_734:unmerged.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-14 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP73#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 737 737_GSM240749.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_737.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Female heads Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -738 738_GSM272653.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_738.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +738 738_GSM272653.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_738.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 739 739_GSM286602.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male#Strain=Canton-S#Tissue=Male-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_739.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male Developmental-Stage=Adult Male#Strain=Canton S#Tissue=Male body Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 740 740_GSM286605.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Embryos-2-6-hr#Strain=Canton-S:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_740.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Embryos 2-6 hr Developmental-Stage=Embryos 2-6 hr#Strain=Canton S Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -741 741_GSM272651.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_741.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +741 741_GSM272651.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_741.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 742 742_GSM275691.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male#Strain=Canton-S#Tissue=Imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_742.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male Developmental-Stage=Adult Male#Strain=Canton S#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 743 743_GSM286603.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Female-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_743.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Female body Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 745 745_GSM286613.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Embryos-0-1-hr#Strain=Canton-S:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_745.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Embryos 0-1 hr Developmental-Stage=Embryos 0-1 hr#Strain=Canton S Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -746 746_GSM272652.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_746.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +746 746_GSM272652.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_746.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 747 747_GSM286601.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male#Strain=Canton-S#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_747.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male Developmental-Stage=Adult Male#Strain=Canton S#Tissue=Male heads Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 748 748_GSM322208.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Larvae-3rd-instar#Strain=Canton-S:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_748.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Canton S Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 749 749_GSM322245.gff.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Larvae-3rd-instar#Strain=Canton-S:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_749.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Canton S Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling @@ -2778,29 +2778,29 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 845 845_SRR030298.fastq.gz D.melanogaster/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K27ac:Developmental-Stage=Adult-Male#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_845.fastq.gz raw-seqfile_fastq D. melanogaster Histone Modification ChIP-seq H3K27ac Adult Male Developmental-Stage=Adult Male#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 845 845_AdultMale_H3K27Ac_Input_tag36_mfold4_250_peaks_1fdr_filtered.bed.gff3.gz D.melanogaster/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3K27ac:Developmental-Stage=Adult-Male#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_845.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-seq H3K27ac Adult Male Developmental-Stage=Adult Male#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 845 845_AdultMale_H3K27Ac_density.wig.gz D.melanogaster/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K27ac:Developmental-Stage=Adult-Male#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_845.wig.gz coverage-graph_wiggle D. melanogaster Histone Modification ChIP-seq H3K27ac Adult Male Developmental-Stage=Adult Male#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -846 846_SRR030345.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_846.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -846 846_E4-8_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_846.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -846 846_E4-8_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_846.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -847 847_E8-12_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_847.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -847 847_E8-12_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_847.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -848 848_E12-16_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp#threshold=44:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_848.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp#threshold=44 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -848 848_SRR030373.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp#threshold=44:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_848.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp#threshold=44 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -848 848_E12-16_PolII_density.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp#threshold=44:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_848.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp#threshold=44 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +846 846_SRR030345.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_846.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +846 846_E4-8_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_846.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +846 846_E4-8_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_846.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +847 847_E8-12_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_847.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +847 847_E8-12_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_847.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +848 848_E12-16_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp#threshold=44:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_848.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp#threshold=44 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +848 848_SRR030373.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp#threshold=44:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_848.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp#threshold=44 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +848 848_E12-16_PolII_density.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp#threshold=44:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_848.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp#threshold=44 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 849 849_E16-20_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 nejire:Developmental-Stage=Embryos-16-20-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_849.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq nejire Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 849 849_E16-20_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle nejire:Developmental-Stage=Embryos-16-20-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_849.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq nejire Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -850 850_SRR030372.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Embryos-20-24-hr#Strain=Y-cn-bw-sp#threshold=19.9:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_850.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 20-24 hr Developmental-Stage=Embryos 20-24 hr#Strain=Y cn bw sp#threshold=19.9 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -850 850_E20-24_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Embryos-20-24-hr#Strain=Y-cn-bw-sp#threshold=19.9:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_850.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 20-24 hr Developmental-Stage=Embryos 20-24 hr#Strain=Y cn bw sp#threshold=19.9 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -850 850_E20-24_PolII_density.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-20-24-hr#Strain=Y-cn-bw-sp#threshold=19.9:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_850.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Embryos 20-24 hr Developmental-Stage=Embryos 20-24 hr#Strain=Y cn bw sp#threshold=19.9 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -851 851_SRR030347.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Larvae-L1-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_851.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L1 stage Developmental-Stage=Larvae L1 stage#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -851 851_L1_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Larvae-L1-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_851.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L1 stage Developmental-Stage=Larvae L1 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -851 851_L1_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L1-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_851.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L1 stage Developmental-Stage=Larvae L1 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -852 852_L3_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Larvae-L3-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_852.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -852 852_L3_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L3-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_852.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -852 852_SRR030348.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Larvae-L3-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_852.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -853 853_Pupae_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_853.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -853 853_Pupae_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_853.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -853 853_SRR030335.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_853.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -853 853_SRR030349.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_853.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +850 850_SRR030372.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-20-24-hr#Strain=Y-cn-bw-sp#threshold=19.9:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_850.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 20-24 hr Developmental-Stage=Embryos 20-24 hr#Strain=Y cn bw sp#threshold=19.9 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +850 850_E20-24_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-20-24-hr#Strain=Y-cn-bw-sp#threshold=19.9:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_850.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 20-24 hr Developmental-Stage=Embryos 20-24 hr#Strain=Y cn bw sp#threshold=19.9 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +850 850_E20-24_PolII_density.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-20-24-hr#Strain=Y-cn-bw-sp#threshold=19.9:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_850.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Embryos 20-24 hr Developmental-Stage=Embryos 20-24 hr#Strain=Y cn bw sp#threshold=19.9 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +851 851_SRR030347.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Larvae-L1-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_851.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L1 stage Developmental-Stage=Larvae L1 stage#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +851 851_L1_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-L1-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_851.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L1 stage Developmental-Stage=Larvae L1 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +851 851_L1_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L1-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_851.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L1 stage Developmental-Stage=Larvae L1 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +852 852_L3_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_852.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +852 852_L3_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_852.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +852 852_SRR030348.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_852.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +853 853_Pupae_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_853.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +853 853_Pupae_PolII_eland_result_filtered.txt.Pf0.30000.txt.final.txt.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_853.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +853 853_SRR030335.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_853.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +853 853_SRR030349.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_853.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites 854 854_E0-4_CBP_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle nejire:Developmental-Stage=Embryos-0-4-hr#Strain=Y-cn-bw-sp#threshold=103.1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_854.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq nejire Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Y cn bw sp#threshold=103.1 Rep-1 Dmel_r5.32 White, K. TF binding sites 854 854_E0-4_CBP_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 nejire:Developmental-Stage=Embryos-0-4-hr#Strain=Y-cn-bw-sp#threshold=103.1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_854.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq nejire Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Y cn bw sp#threshold=103.1 Rep-1 Dmel_r5.32 White, K. TF binding sites 855 855_E4-8_CBP_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle nejire:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_855.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq nejire Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites @@ -3015,96 +3015,96 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 882 882_adultmale-CBP-1-251918310373.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Adult-Male:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_882:310373.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip nejire Adult Male Developmental-Stage=Adult Male Rep-1 Dmel_r5.32 White, K. TF binding sites 882 882_adultmale-CBP-3-251918410308.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Adult-Male:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_882:3-251918410308.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip nejire Adult Male Developmental-Stage=Adult Male Rep-2 Dmel_r5.32 White, K. TF binding sites 882 882_adultmale-CBP-3-251918210322.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Adult-Male:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_882:3-251918210322.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip nejire Adult Male Developmental-Stage=Adult Male Rep-2 Dmel_r5.32 White, K. TF binding sites -883 883_L2-PolII-1-251918410199.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_883:410199.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-1-251918310137.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_883:310137.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-3-251918310139.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:3-251918310139.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-2-251918410200.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:2-251918410200.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2_PolII_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_883.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-2-251918210083.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:2-251918210083.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-3-251918210084.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:3-251918210084.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-2-251918310138.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:2-251918310138.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-1-251918210082.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_883:210082.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -883 883_L2-PolII-3-251918410201.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:3-251918410201.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-1-251918210166.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_884:210166.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-3-251918210168.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:3-251918210168.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-3-251918310091.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:3-251918310091.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3_PolII_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_884.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-2-251918410142.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:2-251918410142.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-3-251918410143.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:3-251918410143.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-2-251918310090.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:2-251918310090.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-1-251918410141.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_884:410141.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-1-251918310089.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_884:310089.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -884 884_L3-PolII-2-251918210167.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:2-251918210167.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -885 885_0-4h-8wg16-1-251918210187.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_885:210187.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-2-251918410171.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:2-251918410171.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-1-251918310082.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_885:310082.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-3-251918210190.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:3-251918210190.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-2-251918310083.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:2-251918310083.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-1-251918410170.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_885:410170.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -885 885_E0-4_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_885.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-3-251918410172.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:3-251918410172.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-3-251918310084.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:3-251918310084.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -885 885_0-4h-8wg16-2-251918210189.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:2-251918210189.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -886 886_4-8-8wg16-1-251918410040.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_886:410040.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-3-251918210199.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:3-251918210199.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-1-251918310025.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_886:310025.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-2-251918410041.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:2-251918410041.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_E4-8_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_886.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-3-251918410042.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:3-251918410042.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-2-251918210300.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:2-251918210300.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-2-251918310026.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:2-251918310026.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-1-251918210299.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_886:210299.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -886 886_4-8-8wg16-3-251918310027.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:3-251918310027.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -887 887_E4-8-8wg16-3-251918410064.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:3-251918410064.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-2-251918410066.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:2-251918410066.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-3-251918210218.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:3-251918210218.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-1-251918210216.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_887:210216.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-2-251918310013.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:2-251918310013.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-2-251918210217.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:2-251918210217.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-1-251918310012.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_887:310012.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_887.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-3-251918310014.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:3-251918310014.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -887 887_E4-8-8wg16-1-251918410062.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_887:410062.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -888 888_E16-20_8wg16_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_888.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-1-251918310300.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_888:310300.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-2-251918310023.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:2-251918310023.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-3-251918310024.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:3-251918310024.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-3-251918210298.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:3-251918210298.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-3-251918410039.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:3-251918410039.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-2-251918210197.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:2-251918210197.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-2-251918410038.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:2-251918410038.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-1-251918210205.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_888:210205.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -888 888_16-20-8wg16-1-251918410037.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_888:410037.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -889 889_L3_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_889.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-1-251918210210.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_889:210210.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-1-251918310005.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_889:310005.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-2-251918210211.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-2-251918210211.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-2-251918310006.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-2-251918310006.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8wg16-3-251918410065.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:wg16-3-251918410065.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-1-251918410057.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_889:410057.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-3-251918310008.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-3-251918310008.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-2-251918410058.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-2-251918410058.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites -889 889_L3-8WG16-3-251918210212.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-3-251918210212.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites -890 890_GSM418521.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:21.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418517.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:17.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418516.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_890:6.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418520.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:20.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418518.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:18.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418522.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:22.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418519.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:19.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418514.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_890:4.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_GSM418515.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_890:5.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -890 890_Pupae_PolII-Set2_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_890.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -891 891_adultfemale-8wg16-1-251918210203.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_891:210203.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-2-251918210204.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:2-251918210204.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-3-251918410053.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:3-251918410053.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-2-251918410047.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:2-251918410047.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-2-251918310032.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:2-251918310032.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-1-251918310031.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_891:310031.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites -891 891_AdultFemale_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_891.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-1-251918410046.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_891:410046.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-3-251918310001.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:3-251918310001.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites -891 891_adultfemale-8wg16-3-251918210206.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:3-251918210206.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip pol2 Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites +883 883_L2-PolII-1-251918410199.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_883:410199.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-1-251918310137.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_883:310137.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-3-251918310139.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:3-251918310139.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-2-251918410200.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:2-251918410200.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2_PolII_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_883.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-2-251918210083.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:2-251918210083.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-3-251918210084.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:3-251918210084.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-2-251918310138.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:2-251918310138.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-1-251918210082.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_883:210082.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +883 883_L2-PolII-3-251918410201.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_883:3-251918410201.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-1-251918210166.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_884:210166.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-3-251918210168.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:3-251918210168.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-3-251918310091.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:3-251918310091.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3_PolII_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_884.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-2-251918410142.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:2-251918410142.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-3-251918410143.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:3-251918410143.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-2-251918310090.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:2-251918310090.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-1-251918410141.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_884:410141.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-1-251918310089.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_884:310089.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +884 884_L3-PolII-2-251918210167.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_884:2-251918210167.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +885 885_0-4h-8wg16-1-251918210187.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_885:210187.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-2-251918410171.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:2-251918410171.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-1-251918310082.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_885:310082.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-3-251918210190.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:3-251918210190.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-2-251918310083.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:2-251918310083.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-1-251918410170.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_885:410170.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +885 885_E0-4_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_885.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-3-251918410172.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:3-251918410172.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-3-251918310084.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:3-251918310084.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +885 885_0-4h-8wg16-2-251918210189.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_885:2-251918210189.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +886 886_4-8-8wg16-1-251918410040.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_886:410040.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-3-251918210199.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:3-251918210199.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-1-251918310025.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_886:310025.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-2-251918410041.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:2-251918410041.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_E4-8_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_886.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-3-251918410042.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:3-251918410042.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-2-251918210300.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:2-251918210300.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-2-251918310026.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:2-251918310026.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-1-251918210299.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_886:210299.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +886 886_4-8-8wg16-3-251918310027.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_886:3-251918310027.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +887 887_E4-8-8wg16-3-251918410064.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:3-251918410064.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-2-251918410066.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:2-251918410066.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-3-251918210218.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:3-251918210218.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-1-251918210216.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_887:210216.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-2-251918310013.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:2-251918310013.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-2-251918210217.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:2-251918210217.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-1-251918310012.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_887:310012.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_887.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-3-251918310014.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_887:3-251918310014.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +887 887_E4-8-8wg16-1-251918410062.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_887:410062.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +888 888_E16-20_8wg16_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_888.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-1-251918310300.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_888:310300.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-2-251918310023.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:2-251918310023.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-3-251918310024.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:3-251918310024.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-3-251918210298.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:3-251918210298.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-3-251918410039.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:3-251918410039.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-2-251918210197.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:2-251918210197.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-2-251918410038.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_888:2-251918410038.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-1-251918210205.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_888:210205.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +888 888_16-20-8wg16-1-251918410037.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-16-20-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_888:410037.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Embryos 16-20 hr Developmental-Stage=Embryos 16-20 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +889 889_L3_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_889.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-1-251918210210.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_889:210210.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-1-251918310005.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_889:310005.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-2-251918210211.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-2-251918210211.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-2-251918310006.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-2-251918310006.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8wg16-3-251918410065.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:wg16-3-251918410065.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-1-251918410057.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_889:410057.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-1 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-3-251918310008.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-3-251918310008.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-2-251918410058.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-2-251918410058.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites +889 889_L3-8WG16-3-251918210212.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L3-stage:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_889:WG16-3-251918210212.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Larvae L3 stage Developmental-Stage=Larvae L3 stage Rep-2 Dmel_r5.32 White, K. TF binding sites +890 890_GSM418521.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:21.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418517.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:17.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418516.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_890:6.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418520.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:20.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418518.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:18.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418522.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:22.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418519.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_890:19.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418514.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_890:4.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_GSM418515.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_890:5.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +890 890_Pupae_PolII-Set2_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Pupae#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_890.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Pupae Developmental-Stage=Pupae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +891 891_adultfemale-8wg16-1-251918210203.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_891:210203.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-2-251918210204.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:2-251918210204.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-3-251918410053.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:3-251918410053.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-2-251918410047.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:2-251918410047.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-2-251918310032.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:2-251918310032.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-1-251918310031.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_891:310031.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites +891 891_AdultFemale_8wg16_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_891.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-1-251918410046.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_891:410046.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-3-251918310001.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:3-251918310001.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites +891 891_adultfemale-8wg16-3-251918210206.txt.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Adult-Female:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_891:3-251918210206.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Transcriptional Factor ChIP-chip RNA polymerase II Adult Female Developmental-Stage=Adult Female Rep-2 Dmel_r5.32 White, K. TF binding sites 895 895_L2_H3K27Acs2_Input_tag36_mfold4_250_peaks_1fdr_filtered.bed.gff3.gz D.melanogaster/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3K27ac:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_895.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-seq H3K27ac Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Histone modification and replacement 895 895_SRR030282.fastq.gz D.melanogaster/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K27ac:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_895.fastq.gz raw-seqfile_fastq D. melanogaster Histone Modification ChIP-seq H3K27ac Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Histone modification and replacement 895 895_L2_H3K27Acs2_density.wig.gz D.melanogaster/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K27ac:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_895.wig.gz coverage-graph_wiggle D. melanogaster Histone Modification ChIP-seq H3K27ac Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Histone modification and replacement @@ -3124,14 +3124,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 898 898_MAT_Kr-D2_E-0-8h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Kruppel:Developmental-Stage=Embryos-0-8-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_898.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Kruppel Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites 898 898_E-0-8h_0-8h-kruppel_Test1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Kruppel:Developmental-Stage=Embryos-0-8-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_898.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Kruppel Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites 898 898_E-0-8h_Input-0-8h-D_Ctl2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Kruppel:Developmental-Stage=Embryos-0-8-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_898:Input-0-8h-D_Ctl2.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Kruppel Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites -899 899_E-0-12h_pol-II_Test3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_899.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_MAT_PolII_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_899.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_E-0-12h_Pol-II-14_Test2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_899.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_E-0-12h_Pol-II-7_Test1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_899.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_MAT_PolII_E-0-12h.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_899.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_E-0-12h_Input-1_Ctl1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_899:Input-1_Ctl1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_E-0-12h_input-3-31_Ctl3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_899:input-3-31_Ctl3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -899 899_E-0-12h_Input-2_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_899:Input-2_Ctl2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_E-0-12h_pol-II_Test3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_899.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_MAT_PolII_E-0-12h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_899.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_E-0-12h_Pol-II-14_Test2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_899.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_E-0-12h_Pol-II-7_Test1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_899.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_MAT_PolII_E-0-12h.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_899.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_E-0-12h_Input-1_Ctl1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_899:Input-1_Ctl1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_E-0-12h_input-3-31_Ctl3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_899:input-3-31_Ctl3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +899 899_E-0-12h_Input-2_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Embryos-0-12-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_899:Input-2_Ctl2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 900 900_E-0-4h_0-4h-Input_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL nejire:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_900:0-4h-Input_Ctl2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 900 900_MAT_rbCBP_E-0-4h.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 nejire:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_900.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 900 900_MAT_rbCBP_E-0-4h.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle nejire:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_900.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites @@ -3162,50 +3162,50 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 903 903_8-12h-cbp-1-251918210320.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_903:210320.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 903 903_8-12h-cbp-1-251918410347.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_903:410347.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 903 903_8-12h-cbp-3-251918410345.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_903:410345.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -904 904_L2_PolII-Set2_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_904.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -904 904_L2-polII-1-252178110120.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_904:1-252178110120.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -904 904_L2-polII-3-252178110122.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_904:3-252178110122.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -904 904_L2-polII-2-252178110121.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_904:2-252178110121.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +904 904_L2_PolII-Set2_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_904.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +904 904_L2-polII-1-252178110120.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_904:1-252178110120.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +904 904_L2-polII-3-252178110122.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_904:3-252178110122.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +904 904_L2-polII-2-252178110121.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_904:2-252178110121.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 905 905_E12-16_CBP_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 nejire:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_905.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 905 905_E12-16-CBP-2-252178110008.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_905.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites 905 905_E12-16-CBP-3-252178110009.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy5:Dmel_r5.32:modENCODE_905.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites 905 905_E12-16-CBP-1-252178110006.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt nejire:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_905.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip nejire Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-2-251918210201.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_906:210201.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-3-251918410045.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_906:410045.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-3-251918310030.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_906:310030.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-1-251918310028.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_906:310028.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-2-251918410044.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_906:410044.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-2-251918310029.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_906:310029.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-1-251918410043.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_906:410043.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-1-251918210200.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_906:210200.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_E12-16_PolII_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_906.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -906 906_12-16-8wg16-3-251918210202.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt pol2:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_906:210202.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_Kc-Cells_KC-NOE-CTCF-N_Test3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_MAT_CTCF-N_KcCells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_908.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_Kc-Cells_Input-KC-NOE-cell_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_Kc-Cells_KC-Mock_Ctl1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_MAT_CTCF-N_KcCells.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_908.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_Kc-Cells_KC-CTCF-2_test2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -908 908_Kc-Cells_KC-CTCF-1_Test1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-2-251918210201.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_906:210201.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-3-251918410045.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_906:410045.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-3-251918310030.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_906:310030.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-1-251918310028.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_906:310028.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-2-251918410044.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_906:410044.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-2-251918310029.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:cy3:Dmel_r5.32:modENCODE_906:310029.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-1-251918410043.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_906:410043.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-1-251918210200.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:cy5:Dmel_r5.32:modENCODE_906:210200.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_E12-16_PolII_agilent_dmel3_merged_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_906.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +906 906_12-16-8wg16-3-251918210202.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt RNA-polymerase-II:Developmental-Stage=Embryos-12-16-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:cy3:Dmel_r5.32:modENCODE_906:210202.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Embryos 12-16 hr Developmental-Stage=Embryos 12-16 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_Kc-Cells_KC-NOE-CTCF-N_Test3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_MAT_CTCF-N_KcCells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_908.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_Kc-Cells_Input-KC-NOE-cell_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_Kc-Cells_KC-Mock_Ctl1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_MAT_CTCF-N_KcCells.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_908.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_Kc-Cells_KC-CTCF-2_test2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +908 908_Kc-Cells_KC-CTCF-1_Test1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 909 909_HK00012_H3K36ME22C3_N2_EEMB_2.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_909.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 909 909_24354702_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_909.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 909 909_362740_2009-07-25_13-43_Area1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_909.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 909 909_362740_2009-07-25_13-43_Area1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_909.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 909 909_HK00012_H3K36ME22C3_N2_EEMB_1.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_909.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 909 909_24354702_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_909.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -910 910_S2_DRSC_CG8144_RNAi-4.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_910.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_910:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031721.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:21.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031718.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:18.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -910 910_S2_DRSC_CG8144_RNAi-3.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_910.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031725.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_910:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031727.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_910:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031724.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_910:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -910 910_S2_DRSC_CG8144_RNAi-1.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031719.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:19.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031720.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:20.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031723.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:23.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -910 910_SRR031722.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:22.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_S2_DRSC_CG8144_RNAi-4.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_910.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_910:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031721.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:21.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031718.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:18.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_S2_DRSC_CG8144_RNAi-3.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_910.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031725.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_910:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031727.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_910:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031724.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_910:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +910 910_S2_DRSC_CG8144_RNAi-1.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031719.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:19.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031720.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:20.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031723.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:23.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +910 910_SRR031722.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_910:22.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8144-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 911 911_SDQ0791_MES4_N2_EEMB_1_12601901_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair MES-4:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_911.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip MES-4 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 911 911_SDQ0791_MES4_N2_EEMB_2_OID16070_13728201_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair MES-4:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_911.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip MES-4 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 911 911_SDQ0791_MES4_N2_EEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MES-4:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_911.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip MES-4 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -3215,29 +3215,29 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 911 911_SDQ0791_MES4_N2_EEMB_1_12601901_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair MES-4:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_911.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip MES-4 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 911 911_SDQ0791_MES4_N2_EEMB_3_OID24463_36199302_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair MES-4:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_911.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip MES-4 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 911 911_SDQ0791_MES4_N2_EEMB_3.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MES-4:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_911.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip MES-4 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -912 912_Kc-Cells_Input-KC-NOE-2_Ctl2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement -912 912_Kc-Cells_Input-KC-NOE-3_Ctl3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:input:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -912 912_Kc-Cells_Input-KC-NOE-1_Ctl1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -912 912_Kc-Cells_KC-NOE-1_test1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -912 912_Kc-Cells_KC-NOE-2_test2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement -912 912_MAT_H3K4me3_KcCells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_912.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -912 912_MAT_H3K4me3_KcCells.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_912.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -912 912_Kc-Cells_KC-NOE-3_test3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -913 913_MAT_CTCF-N_S2Cells.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_913.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -913 913_S2-Cells_Input-S2_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -913 913_S2-Cells_S2-Mock_Ctl1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -913 913_S2-Cells_S2-CTCF-1_Test1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -913 913_S2-Cells_CTCF_Test3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites -913 913_S2-Cells_S2-CTCF-2_Test2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -913 913_MAT_CTCF-N_S2Cells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_913.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -914 914_MAT_H3K4me3_S2cells.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_914.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -914 914_MAT_H3K4me3_S2cells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_914.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -914 914_S2-Cells_Input-NOE-3_Ctl3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:input:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -914 914_S2-Cells_H3K4Me3-7-1_Test2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement -914 914_S2-Cells_IN-1_Ctl1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -914 914_S2-Cells_NOE-S2-3_Test3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement -914 914_S2-Cells_h3k4me3_Test1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement -914 914_S2-Cells_input-S2_Ctl2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +912 912_Kc-Cells_Input-KC-NOE-2_Ctl2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +912 912_Kc-Cells_Input-KC-NOE-3_Ctl3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:input:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +912 912_Kc-Cells_Input-KC-NOE-1_Ctl1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +912 912_Kc-Cells_KC-NOE-1_test1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +912 912_Kc-Cells_KC-NOE-2_test2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +912 912_MAT_H3K4me3_KcCells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_912.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +912 912_MAT_H3K4me3_KcCells.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_912.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +912 912_Kc-Cells_KC-NOE-3_test3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_912.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +913 913_MAT_CTCF-N_S2Cells.bed_dcc.gff.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_913.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +913 913_S2-Cells_Input-S2_Ctl2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +913 913_S2-Cells_S2-Mock_Ctl1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +913 913_S2-Cells_S2-CTCF-1_Test1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +913 913_S2-Cells_CTCF_Test3.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites +913 913_S2-Cells_S2-CTCF-2_Test2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +913 913_MAT_CTCF-N_S2Cells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_913.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +914 914_MAT_H3K4me3_S2cells.bed_dcc.gff.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_914.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +914 914_MAT_H3K4me3_S2cells.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_914.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +914 914_S2-Cells_Input-NOE-3_Ctl3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:input:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +914 914_S2-Cells_H3K4Me3-7-1_Test2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement +914 914_S2-Cells_IN-1_Ctl1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +914 914_S2-Cells_NOE-S2-3_Test3.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. Histone modification and replacement +914 914_S2-Cells_h3k4me3_Test1.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +914 914_S2-Cells_input-S2_Ctl2.CEL.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_914.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. Histone modification and replacement 918 918_GSM409080_Total_RNA_Tripli_pvalue_Dm_BDGPv5.bed.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_918.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. RNA expression profiling 918 918_E-0-12h_dscDNA-2_Test2.CEL.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_918.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. RNA expression profiling 918 918_E-0-12h_gDNA_Ctl1.CEL.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_918:gDNA_Ctl.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. RNA expression profiling @@ -3260,14 +3260,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 921 921_265.pirrota_439_B3_BEAF.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_921:265.pirrota_439_B3_BEAF.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 921 921_repset.4620429.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_921:repset.4620429.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 921 921_265.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_921:265.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_363.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922:363.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_267.pirrota_441_A12_INPUT.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_922:267.pirrota_441_A12_INPUT.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_repset.4620888.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922:repset.4620888.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_repset.4620888.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_318.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922:318.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_922:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_318.pirrota_497_A12_BEAF-70.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_922:18.pirrota_497_A12_BEAF-.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -922 922_363.pirrota_541_S14_BEAF70.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_922:63.pirrota_541_S14_BEAF.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_363.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922:363.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_267.pirrota_441_A12_INPUT.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_922:267.pirrota_441_A12_INPUT.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_repset.4620888.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922:repset.4620888.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_repset.4620888.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_318.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_922:318.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_922:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_318.pirrota_497_A12_BEAF-70.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_922:18.pirrota_497_A12_BEAF-.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +922 922_363.pirrota_541_S14_BEAF70.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_922:63.pirrota_541_S14_BEAF.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 924 924_repset.4623893.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_924.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 924 924_406.pirrota_621_B5_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_924:6.pirrota_621_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 924 924_433.pirrota_656_B5_CP190-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_924:33.pirrota_656_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -3276,22 +3276,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 924 924_408.pirrota_625_B3_CP190-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_924:08.pirrota_625_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 924 924_repset.4623893.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_924:repset.4623893.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 924 924_408.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_924:408.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_925:62.pirrota_540_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_393.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925:393.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_322.pirrota_501_S14_CP190-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_925:22.pirrota_501_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_925:20.pirrota_499_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_322.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925:322.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_393.pirrota_586_A12_CP190-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_925:93.pirrota_586_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_repset.4621224.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -925 925_repset.4621224.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925:repset.4621224.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_repset.5013876.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926:repset.5013876.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_926:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_514.pirrota_744_A17_dMi-2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_926:14.pirrota_744_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_525.pirrota_755_A18_dMi-2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_926:25.pirrota_755_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_525.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926:525.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_514.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926:514.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_repset.5013876.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -926 926_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_926:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_925:62.pirrota_540_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_393.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925:393.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_322.pirrota_501_S14_CP190-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_925:22.pirrota_501_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_925:20.pirrota_499_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_322.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925:322.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_393.pirrota_586_A12_CP190-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_925:93.pirrota_586_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_repset.4621224.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +925 925_repset.4621224.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_925:repset.4621224.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_repset.5013876.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926:repset.5013876.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_926:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_514.pirrota_744_A17_dMi-2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_926:14.pirrota_744_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_525.pirrota_755_A18_dMi-2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_926:25.pirrota_755_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_525.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926:525.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_514.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926:514.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_repset.5013876.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_926.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +926 926_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_926:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 927 927_635.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_927:635.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 927 927_634.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_927:634.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 927 927_406.pirrota_621_B5_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_927:6.pirrota_621_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -3300,22 +3300,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 927 927_634.pirrota_863_B3_dRING.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_927:4.pirrota_863_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 927 927_repset.8061139.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dRING:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_927.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 927 927_635.pirrota_864_B5_dRING.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_927:5.pirrota_864_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_122.pirrota_277_S12_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_928:122.pirrota_277_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_575.pirrota_805_A12_dRING.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_928:575.pirrota_805_A.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_repset.8061137.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_633.pirrota_862_S12_dRING.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_928:633.pirrota_862_S.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_575.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928:575.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_928:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_633.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928:633.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -928 928_repset.8061137.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928:repset.8061137.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -930 930_604.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930:604.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_603.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930:603.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_930:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_repset.8061138.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_604.pirrota_833_CL8-2_H3K18ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_930:4.pirrota_833_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_930:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_603.pirrota_832_CL8-1_H3K18ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_930:3.pirrota_832_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -930 930_repset.8061138.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930:repset.8061138.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +928 928_122.pirrota_277_S12_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_928:122.pirrota_277_S12_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_575.pirrota_805_A12_dRING.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_928:575.pirrota_805_A.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_repset.8061137.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_633.pirrota_862_S12_dRING.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_928:633.pirrota_862_S.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_575.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928:575.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_928:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_633.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928:633.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +928 928_repset.8061137.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_928:repset.8061137.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +930 930_604.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930:604.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_603.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930:603.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_930:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_repset.8061138.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_604.pirrota_833_CL8-2_H3K18ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_930:4.pirrota_833_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_930:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_603.pirrota_832_CL8-1_H3K18ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_930:3.pirrota_832_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +930 930_repset.8061138.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_930:repset.8061138.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 931 931_repset.4161794.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_931:repset.4161794.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 931 931_repset.4161794.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_931.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 931 931_173.pirrota_345_E7_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_931:3.pirrota_345_E7.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -3332,38 +3332,38 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 932 932_179.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_932:179.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 932 932_182.pirrota_354_E6_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_932:2.pirrota_354_E6.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 932 932_repset.4161797.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_932.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_600.pirrota_829_CL8-2_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_937:600.pirrota_829_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_599.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937:599.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_937:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_600.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937:600.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_599.pirrota_828_CL8-1_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_937:599.pirrota_828_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_937:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_repset.8061125.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -937 937_repset.8061125.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937:repset.8061125.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_451.pirrota_682_KC2_Input_14cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_938:1.pirrota_682_KC2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_repset.4623896.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938:repset.4623896.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_439.pirrota_670_KC1_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_938:39.pirrota_670_KC1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_450.pirrota_681_KC1_Input_14cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_938:0.pirrota_681_KC1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_439.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938:439.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_repset.4623896.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_440.pirrota_671_KC2_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_938:40.pirrota_671_KC2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -938 938_440.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938:440.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_repset.8061134.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940:repset.8061134.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_601.pirrota_830_CL8-1_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_940:1.pirrota_830.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_602.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940:602.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_940:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_601.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940:601.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_602.pirrota_831_CL8-1_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_940:2.pirrota_831.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_repset.8061134.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -940 940_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_940:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -941 941_repset.5014217.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941:repset.5014217.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_941:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_941:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_repset.5014217.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_550.pirrota_783_A15_HP1b.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_941:50.pirrota_783_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_549.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941:549.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_549.pirrota_782_All_HP1b.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_941:49.pirrota_782_All.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -941 941_550.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941:550.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +937 937_600.pirrota_829_CL8-2_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_937:600.pirrota_829_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_599.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937:599.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_937:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_600.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937:600.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_599.pirrota_828_CL8-1_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_937:599.pirrota_828_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_937:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_repset.8061125.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +937 937_repset.8061125.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_937:repset.8061125.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_451.pirrota_682_KC2_Input_14cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_938:1.pirrota_682_KC2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_repset.4623896.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938:repset.4623896.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_439.pirrota_670_KC1_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_938:39.pirrota_670_KC1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_450.pirrota_681_KC1_Input_14cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_938:0.pirrota_681_KC1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_439.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938:439.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_repset.4623896.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_440.pirrota_671_KC2_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_938:40.pirrota_671_KC2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +938 938_440.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_938:440.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_repset.8061134.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940:repset.8061134.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_601.pirrota_830_CL8-1_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_940:1.pirrota_830.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_602.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940:602.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_940:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_601.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940:601.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_602.pirrota_831_CL8-1_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_940:2.pirrota_831.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_repset.8061134.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_940.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +940 940_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_940:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +941 941_repset.5014217.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941:repset.5014217.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_941:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_941:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_repset.5014217.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_550.pirrota_783_A15_HP1b.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_941:50.pirrota_783_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_549.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941:549.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_549.pirrota_782_All_HP1b.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_941:49.pirrota_782_All.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +941 941_550.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_941:550.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 942 942_repset.5014216.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_942.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 942 942_553.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_942:553.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 942 942_423.pirrota_646_B3_Input2_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_942:423.pirrota_646_B3_Input2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -3372,46 +3372,46 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 942 942_391.pirrota_602_B5_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_942:391.pirrota_602_B5_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 942 942_repset.5014216.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_942:repset.5014216.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 942 942_552.pirrota_785_B3_HP1c_aff.pur_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_942:2.pirrota_785_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_500.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943:500.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_943:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_repset.5013686.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943:repset.5013686.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_500.pirrota_733_A11_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_943:0.pirrota_733_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_501.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943:501.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_943:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_repset.5013686.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -943 943_501.pirrota_734_A15_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_943:1.pirrota_734_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_944:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_944:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_448.pirrota_679_A15_HP2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_944:8.pirrota_679_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_447.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944:447.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_repset.4623897.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_447.pirrota_678_A11_HP2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_944:7.pirrota_678_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_448.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944:448.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -944 944_repset.4623897.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944:repset.4623897.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_repset.5013871.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945:repset.5013871.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_517.pirrota_747_A17_JIL-1.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_945:17.pirrota_747_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_945:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_repset.5013871.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_528.pirrota_758_A18_JIL-1.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_945:28.pirrota_758_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_945:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_517.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945:517.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -945 945_528.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945:528.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_946:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_repset.5013879.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946:repset.5013879.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_524.pirrota_754_A18_MBD-R2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_946:24.pirrota_754_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_513.pirrota_743_A17_MBD-R2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_946:13.pirrota_743_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_repset.5013879.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_524.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946:524.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_513.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946:513.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -946 946_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_946:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_repset.5013880.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_repset.5013880.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947:repset.5013880.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_947:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_522.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947:522.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_947:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_511.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947:511.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_511.pirrota_741_A17_NURF301.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_947:11.pirrota_741_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -947 947_522.pirrota_752_A18_NURF301.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_947:22.pirrota_752_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_500.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943:500.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_943:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_repset.5013686.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943:repset.5013686.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_500.pirrota_733_A11_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_943:0.pirrota_733_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_501.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943:501.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_943:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_repset.5013686.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_943.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +943 943_501.pirrota_734_A15_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_943:1.pirrota_734_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_944:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_944:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_448.pirrota_679_A15_HP2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_944:8.pirrota_679_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_447.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944:447.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_repset.4623897.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_447.pirrota_678_A11_HP2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_944:7.pirrota_678_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_448.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944:448.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +944 944_repset.4623897.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_944:repset.4623897.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_repset.5013871.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945:repset.5013871.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_517.pirrota_747_A17_JIL-1.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_945:17.pirrota_747_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_945:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_repset.5013871.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_528.pirrota_758_A18_JIL-1.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_945:28.pirrota_758_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_945:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_517.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945:517.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +945 945_528.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_945:528.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_946:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_repset.5013879.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946:repset.5013879.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_524.pirrota_754_A18_MBD-R2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_946:24.pirrota_754_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_513.pirrota_743_A17_MBD-R2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_946:13.pirrota_743_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_repset.5013879.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_524.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946:524.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_513.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_946:513.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +946 946_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_946:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_repset.5013880.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_repset.5013880.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947:repset.5013880.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_530.pirrota_760_A17_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_947:0.pirrota_760_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_522.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947:522.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_531.pirrota_761_A18_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_947:1.pirrota_761_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_511.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_947:511.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_511.pirrota_741_A17_NURF301.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_947:11.pirrota_741_A17.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +947 947_522.pirrota_752_A18_NURF301.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_947:22.pirrota_752_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 948 948_638.pirrota_867_B5_PCL.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_948:8.pirrota_867_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 948 948_637.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_948:637.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 948 948_638.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_948:638.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -3420,24 +3420,24 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 948 948_406.pirrota_621_B5_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_948:6.pirrota_621_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 948 948_repset.8061127.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PCL:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_948.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 948 948_637.pirrota_866_B3_PCL.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_948:7.pirrota_866_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_558.pirrota_791_KC2_Piwi_2569_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_949:558.pirrota_791_KC2_Piwi_2569_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_repset.4623034.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:repset.4623034.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_388.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:388.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_repset.4623034.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_558.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:558.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_424.pirrota_647_Kc2_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_949:424.pirrota_647_Kc2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_389.pirrota_600_Kc1_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_949:389.pirrota_600_Kc1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_388.pirrota_599_Kc1_Piwi.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_949:388.pirrota_599_Kc1_Piwi.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_420.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:420.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -949 949_420.pirrota_643_KC2_Piwi.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_949:420.pirrota_643_KC2_Piwi.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_293.pirrota_482_B2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_950:3.pirrota_482_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_repset.4621045.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950:repset.4621045.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_343.pirrota_549__B2_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_950:3.pirrota_549__B2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_342.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950:342.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_343.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950:343.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_repset.4621045.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_292.pirrota_481_B1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_950:2.pirrota_481_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -950 950_342.pirrota_548_B1_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_950:2.pirrota_548_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_558.pirrota_791_KC2_Piwi_2569_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_949:558.pirrota_791_KC2_Piwi_2569_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_repset.4623034.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:repset.4623034.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_388.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:388.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_repset.4623034.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_558.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:558.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_424.pirrota_647_Kc2_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_949:424.pirrota_647_Kc2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_389.pirrota_600_Kc1_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_949:389.pirrota_600_Kc1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_388.pirrota_599_Kc1_Piwi.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_949:388.pirrota_599_Kc1_Piwi.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_420.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_949:420.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +949 949_420.pirrota_643_KC2_Piwi.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_949:420.pirrota_643_KC2_Piwi.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_293.pirrota_482_B2_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_950:3.pirrota_482_B2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_repset.4621045.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950:repset.4621045.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_343.pirrota_549__B2_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_950:3.pirrota_549__B2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_342.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950:342.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_343.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950:343.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_repset.4621045.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_950.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_292.pirrota_481_B1_Input_14cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_950:2.pirrota_481_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +950 950_342.pirrota_548_B1_RNApolII_ALG_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_950:2.pirrota_548_B1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 951 951_407.pirrota_622_B3_SuHw-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_951:07.pirrota_622_B3_SuHw.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 951 951_434.pirrota_657_B5_SuHW-HB.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_951:34.pirrota_657_B5_SuHW.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 951 951_405.pirrota_620_B3_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_951:5.pirrota_620_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -3454,14 +3454,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 952 952_repset.4623889.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_952:repset.4623889.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 952 952_423.pirrota_646_B3_Input2_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_952:423.pirrota_646_B3_Input2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 952 952_382.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_952:382.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_626.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953:626.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_repset.8061128.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_429.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953:429.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_repset.8061128.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953:repset.8061128.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_417.pirrota_641_S12_input_gk2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_953:417.pirrota_641_S12_input_gk2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_429.pirrota_652_S12_WDS_91.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_953:429.pirrota_652_S12_WDS_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_566.pirrota_803_A14.input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_953:566.pirrota_803_A14.input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -953 953_626.pirrota_855_A14.WDS-91.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_953:626.pirrota_855_A14.WDS-.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_626.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953:626.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_repset.8061128.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_429.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953:429.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_repset.8061128.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_953:repset.8061128.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_417.pirrota_641_S12_input_gk2.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_953:417.pirrota_641_S12_input_gk2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_429.pirrota_652_S12_WDS_91.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_953:429.pirrota_652_S12_WDS_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_566.pirrota_803_A14.input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_953:566.pirrota_803_A14.input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +953 953_626.pirrota_855_A14.WDS-91.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_953:626.pirrota_855_A14.WDS-.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 954 954_repset.4161957.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_954.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 954 954_repset.4161957.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_954:repset.4161957.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 954 954_194.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_954:194.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -3502,30 +3502,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 958 958_repset.5013680.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_958.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 958 958_482.pirrota_718_Larvae_Prep4_H3K9me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-4:ChIP:Dmel_r5.32:modENCODE_958.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-4 Dmel_r5.32 Karpen, G. Histone modification and replacement 958 958_482.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_958:482.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_repset.4161604.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963:repset.4161604.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_144.pirrota_299_S11_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_963:44.pirrota_299_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_153.pirrota_308_S14_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_963:53.pirrota_308_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_963:3.pirrota_298_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_963:8.pirrota_303_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_repset.4161604.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_153.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963:153.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -963 963_144.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963:144.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_618.pirrota_847_CL8-2_H3K9ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_964:8.pirrota_847_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_repset.8061136.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_618.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964:618.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_964:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_964:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_617.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964:617.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_617.pirrota_846_CL8-1_H3K9ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_964:7.pirrota_846_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -964 964_repset.8061136.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964:repset.8061136.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_574.pirrota_804_A12_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_965:574.pirrota_804_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_46.pirrota_196_S9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_965:46.pirrota_196_S9_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_44.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965:44.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_repset.7766223.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_574.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965:574.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_965:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_44.pirrota_194_S9_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_965:44.pirrota_194_S9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -965 965_repset.7766223.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965:repset.7766223.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_repset.4161604.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963:repset.4161604.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_144.pirrota_299_S11_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_963:44.pirrota_299_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_153.pirrota_308_S14_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_963:53.pirrota_308_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_963:3.pirrota_298_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_963:8.pirrota_303_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_repset.4161604.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_153.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963:153.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +963 963_144.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_963:144.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_618.pirrota_847_CL8-2_H3K9ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_964:8.pirrota_847_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_repset.8061136.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_618.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964:618.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_608.pirrota_837_CL8-2_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_964:8.pirrota_837_CL8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_607.pirrota_836_CL8-1_Input_DNA_14cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_964:7.pirrota_836_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_617.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964:617.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_617.pirrota_846_CL8-1_H3K9ac.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_964:7.pirrota_846_CL8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +964 964_repset.8061136.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_964:repset.8061136.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_574.pirrota_804_A12_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_965:574.pirrota_804_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_46.pirrota_196_S9_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_965:46.pirrota_196_S9_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_44.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965:44.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_repset.7766223.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_574.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965:574.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_965:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_44.pirrota_194_S9_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_965:44.pirrota_194_S9.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +965 965_repset.7766223.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_965:repset.7766223.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 966 966_209.pirrota_366_E6_H3K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_966:209.pirrota_366.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 966 966_190.pirrota_362_E6_H3K4Me3.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_966:190.pirrota_362.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 966 966_206.pirrota_363_E6_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_966.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -3591,9 +3591,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 982 982_OID21380_24344002_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_982.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 982 982_OID22177_363014_2009-07-25_13-30_Area1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_982.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 982 982_OID21380_24344002_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_982.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -984 984_L2_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp#threshold=16.2:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_984.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp#threshold=16.2 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -984 984_L2_PolII_density.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp#threshold=16.2:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_984.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp#threshold=16.2 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -984 984_SRR030347.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp#threshold=16.2:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_984.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq pol2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp#threshold=16.2 Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +984 984_L2_PolII_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp#threshold=16.2:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_984.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp#threshold=16.2 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +984 984_L2_PolII_density.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp#threshold=16.2:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_984.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp#threshold=16.2 Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +984 984_SRR030347.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp#threshold=16.2:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_984.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq RNA polymerase II Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp#threshold=16.2 Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites 985 985_E8-12_CBP-Set2_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle nejire:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_985.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq nejire Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites 985 985_SRR030382.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq nejire:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_985.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq nejire Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites 985 985_E8-12_CBP-Set2_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 nejire:Developmental-Stage=Embryos-8-12-hr#Strain=Y-cn-bw-sp:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_985.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq nejire Embryos 8-12 hr Developmental-Stage=Embryos 8-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. TF binding sites @@ -3603,10 +3603,10 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 992 992_L2_pilot.sam.gz C.elegans/mRNA/RACE/alignment_sam 3-prime-UTR:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:RACE:Rep-3::Cele_WS220:modENCODE_992.sam.gz alignment_sam C. elegans mRNA RACE 3-prime-UTR Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-3 Cele_WS220 Piano, F. Gene Structure 992 992_L3_pilot.sam.gz C.elegans/mRNA/RACE/alignment_sam 3-prime-UTR:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_992:L3.sam.gz alignment_sam C. elegans mRNA RACE 3-prime-UTR Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Piano, F. Gene Structure 992 992_L1_pilot.sam.gz C.elegans/mRNA/RACE/alignment_sam 3-prime-UTR:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:RACE:Rep-2::Cele_WS220:modENCODE_992.sam.gz alignment_sam C. elegans mRNA RACE 3-prime-UTR Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Piano, F. Gene Structure -2005 2005_V021.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2005.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2006 2006_V026.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2006.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2008 2008_V083.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2008.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2009 2009_V084.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2009.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2005 2005_V021.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2005.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2006 2006_V026.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2006.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2008 2008_V083.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2008.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2009 2009_V084.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2009.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2010 2010_SRR030232.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq PolyA-RNA:Developmental-Stage=Embryos-0-4-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2010.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq PolyA-RNA Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. RNA expression profiling 2010 2010_0-4_accepted_hits.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam PolyA-RNA:Developmental-Stage=Embryos-0-4-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2010.sam.gz alignment_sam D. melanogaster mRNA RNA-seq PolyA-RNA Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. RNA expression profiling 2019 2019_4-8_accepted_hits.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam PolyA-RNA:Developmental-Stage=Embryos-4-8-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2019.sam.gz alignment_sam D. melanogaster mRNA RNA-seq PolyA-RNA Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. RNA expression profiling @@ -3660,29 +3660,29 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2339 2339_OID20832_27331802_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2339.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2339 2339_AB8898_H3K9ME3339901_N2_EEMB_1.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2339.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2339 2339_OID20832_27331802_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2339.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2340.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_940.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2340.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_940.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2340.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2340.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2341 2341_Dro2_AS_Dm_VirginHead_F_1d_941.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2341.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2341 2341_Dro2_AS_Dm_VirginHead_F_1d_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2341.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2341 2341_Dro2_AS_Dm_VirginHead_F_1d_941.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2341.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2341 2341_Dro2_AS_Dm_VirginHead_F_1d_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2341.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -2342 2342_Dro2_AS_Dm_VirginHead_F_4d_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2342.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2342 2342_Dro2_AS_Dm_VirginHead_F_4d_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2342.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -2342 2342_Dro2_AS_Dm_VirginHead_F_4d_942.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2342.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2342 2342_Dro2_AS_Dm_VirginHead_F_4d_942.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2342.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2340.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_940.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2340.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_940.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2340.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2340 2340_Dro2_AS_Dm_MatedOvary_F_4d_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R#Tissue=Adult-ovaries:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2340.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon-R#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2341 2341_Dro2_AS_Dm_VirginHead_F_1d_941.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2341.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2341 2341_Dro2_AS_Dm_VirginHead_F_1d_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2341.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2341 2341_Dro2_AS_Dm_VirginHead_F_1d_941.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2341.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2341 2341_Dro2_AS_Dm_VirginHead_F_1d_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2341.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +2342 2342_Dro2_AS_Dm_VirginHead_F_4d_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2342.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2342 2342_Dro2_AS_Dm_VirginHead_F_4d_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2342.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +2342 2342_Dro2_AS_Dm_VirginHead_F_4d_942.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2342.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2342 2342_Dro2_AS_Dm_VirginHead_F_4d_942.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Female-heads:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2342.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Female heads Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 2364 2364_OID22177_362804_2009-07-25_15-01_Area1_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2364.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 2364 2364_11764001_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2364.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 2364 2364_NA_N2_EEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2364.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 2364 2364_11764001_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2364.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 2364 2364_OID22177_362804_2009-07-25_15-01_Area1_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2364.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 2364 2364_NA_N2_EEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2364.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2374 2374_GSM399110.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2374.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2375 2375_GSM371638.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-NP#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2375.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-NP#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2374 2374_GSM399110.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2374.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2375 2375_GSM371638.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-NP#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2375.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-NP#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2376 2376_GSM399105.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male#Strain=Canton-S#Tissue=Imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2376.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male Developmental-Stage=Adult Male#Strain=Canton S#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2379 2379_GSM280087.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2379.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2380 2380_GSM280088.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2380.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2379 2379_GSM280087.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2379.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2380 2380_GSM280088.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2380.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2381 2381_GSM280086.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult#Strain=Y-cn-bw-sp#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2381.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Developmental-Stage=Adult#Strain=Y cn bw sp#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2382 2382_SS00050_IGG_N2_EEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2382.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 2382 2382_OID18184_14630901_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2382.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -3690,16 +3690,16 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2382 2382_OID20832_27331202_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2382.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 2382 2382_SS00050_IGG_N2_EEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2382.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 2382 2382_OID20832_27331202_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair no-antibody-control:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2382.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip no-antibody-control Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -2384 2384_Orr-Weaver_251663510030_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2384 2384_Orr-Weaver_251663510030_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2384 2384_follicle_244_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2384.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2384 2384_follicle_244_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2384.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2384 2384_Orr-Weaver_251663510031_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=oocyte-associated-follicle-cell:CGH:Rep-2:Cy3:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=oocyte associated follicle cell Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2384 2384_Orr-Weaver_251663510031_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R#Tissue=oocyte-associated-follicle-cell:CGH:Rep-2:Cy5:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R#Tissue=oocyte associated follicle cell Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2385 2385_Orr-Weaver_251476110027_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2385.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2385 2385_follicle_188_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2385.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2385 2385_Orr-Weaver_251476110027_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2385.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2385 2385_follicle_188_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2385.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2384 2384_Orr-Weaver_251663510030_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2384 2384_Orr-Weaver_251663510030_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2384 2384_follicle_244_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2384.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2384 2384_follicle_244_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2384.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2384 2384_Orr-Weaver_251663510031_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-2:Cy3:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Oocyte associated follicle cell Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2384 2384_Orr-Weaver_251663510031_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-2:Cy5:Dmel_r5.32:modENCODE_2384.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R#Tissue=Oocyte associated follicle cell Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2385 2385_Orr-Weaver_251476110027_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2385.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2385 2385_follicle_188_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2385.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2385 2385_Orr-Weaver_251476110027_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2385.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2385 2385_follicle_188_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Oregon-R-Orr-Weaver#Tissue=Oocyte-associated-follicle-cell:CGH:Rep-1::Dmel_r5.32:modENCODE_2385.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Oregon-R Orr-Weaver#Tissue=Oocyte associated follicle cell Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation 2398 2398_HK00009_H3K9me3_2F3_N2_L3_2_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2398:2.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2398 2398_HK00009_H3K9me3_2F3_N2_L3_2_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2398:2.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2398 2398_HK00009_H3K9me3_2F3_N2_L3_1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2398:1.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -3802,12 +3802,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2435 2435_Snyder_N2_POLII_eemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2435:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2435 2435_Snyder_N2_Input_eeemb_unmerged.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2435:emb_unmerged.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2435 2435_Snyder_N2_POLII_eemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2435:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2436 2436_Snyder_N2_POLII_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2436:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2436 2436_Snyder_N2_Input_lemb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2436:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2436 2436_Snyder_N2_POLII_lemb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2436.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -2436 2436_Snyder_N2_Input_lemb_unmerged.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2436:unmerged.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2436 2436_Snyder_N2_POLII_lemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2436:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2436 2436_Snyder_N2_POLII_lemb_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 AMA-1:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2436.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2436 2436_Snyder_N2_POLII_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2436:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2436 2436_Snyder_N2_Input_lemb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2436:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2436 2436_Snyder_N2_POLII_lemb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2436.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +2436 2436_Snyder_N2_Input_lemb_unmerged.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2436:unmerged.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2436 2436_Snyder_N2_POLII_lemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2436:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2436 2436_Snyder_N2_POLII_lemb_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 AMA-1:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2436.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq AMA-1 Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2437 2437_Snyder_N2_POLII_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2437:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2437 2437_Snyder_N2_POLII_L1_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 AMA-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2437.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq AMA-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2437 2437_Snyder_N2_Input_L1_unmerged.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2437:unmerged.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -3886,14 +3886,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2451 2451_Snyder_GEI11_Input_L4_unmerged.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle GEI-11:Developmental-Stage=Larvae-L4-stage#Strain=OP179#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2451:unmerged.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq GEI-11 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP179#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2451 2451_Snyder_GEI11_GFP_L4_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle GEI-11:Developmental-Stage=Larvae-L4-stage#Strain=OP179#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2451.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq GEI-11 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP179#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 2451 2451_Snyder_GEI11_GFP_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle GEI-11:Developmental-Stage=Larvae-L4-stage#Strain=OP179#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2451:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq GEI-11 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP179#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2454 2454_L3-L4-hypodermis_tars_maxgap30_minrun100_thresh9.87.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_534DMM0196-20090617-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2454:196-20090617.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_L3-L4-hypodermis-196_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:196_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_L3-L4-hypodermis-224_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:224_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_534DMM0224-20091012-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2454:224-20091012.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_L3-L4-hypodermis-223_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:223_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_L3-L4-hypodermis_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2454 2454_534DMM0223-20091012-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2454:223-20091012.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_L3-L4-hypodermis_tars_maxgap30_minrun100_thresh9.87.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_534DMM0196-20090617-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2454:196-20090617.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_L3-L4-hypodermis-196_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:196_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_L3-L4-hypodermis-224_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:224_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_534DMM0224-20091012-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2454:224-20091012.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_L3-L4-hypodermis-223_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:223_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_L3-L4-hypodermis_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2454:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2454 2454_534DMM0223-20091012-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=NC1790#Tissue=Hypodermis-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2454:223-20091012.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=NC1790#Tissue=Hypodermis (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 2482 2482_marco1_D.sam.gz C.elegans/mRNA/RACE/alignment_sam 3-prime-UTR:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_2482:1_D.sam.gz alignment_sam C. elegans mRNA RACE 3-prime-UTR Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. Gene Structure 2482 2482_marco2_D.sam.gz C.elegans/mRNA/RACE/alignment_sam 3-prime-UTR:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_2482:2_D.sam.gz alignment_sam C. elegans mRNA RACE 3-prime-UTR Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. Gene Structure 2482 2482_marco2_B.sam.gz C.elegans/mRNA/RACE/alignment_sam 3-prime-UTR:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_2482:2_B.sam.gz alignment_sam C. elegans mRNA RACE 3-prime-UTR Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. Gene Structure @@ -3933,54 +3933,54 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2500 2500_534DMM0202-20090714-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC2015#Tissue=PVC-neurons-(embryonic)#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2500:02-20090714.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC2015#Tissue=PVC neurons (embryonic)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 2500 2500_emb-PVC-202_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC2015#Tissue=PVC-neurons-(embryonic)#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2500:202_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC2015#Tissue=PVC neurons (embryonic)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 2500 2500_534DMM0208-20090714-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC2015#Tissue=PVC-neurons-(embryonic)#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2500:08-20090714.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC2015#Tissue=PVC neurons (embryonic)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2502 2502_GSM333864_507pell_271517_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:33864_507pell_271517.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333867_516pell_271522_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:33867_516pell_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM387598_C3H2A_vs_VPN_277877-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:87598_C3H2A_vs_VPN_277877-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333867.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:33867.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333866_508pell_271518_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:33866_508pell_271518.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333867_516pell_271522_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:33867_516pell_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM387598_C3H2A_vs_VPN_277877-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:87598_C3H2A_vs_VPN_277877-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333864.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:33864.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333866_508pell_271518_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:33866_508pell_271518.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333864_507pell_271517_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:33864_507pell_271517.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM333866.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:33866.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2502 2502_GSM387598_C3H2A_vs_VPN_277877-2.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:87598_C3H2A_vs_VPN_277877-2.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333843_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2503:43.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333839_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2503:39.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333839_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2503:39.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333836_VN_185168-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2503:36_VN_185168-3.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333836_VN_185168-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2503:36_VN_185168-3.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333843_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2503:43.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333839.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2503:39.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333843.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2503:43.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2503 2503_GSM333836.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2503:36.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM387597_C3H2A_vs_VPDINP_276912-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2504:87597_C3H2A_vs_VPDINP_276912-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM387597.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2504:87597.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM333849.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2504:33849.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM391381_C2.2AVIPD_237448_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2504:91381_C2.2AVIPD_237448.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM391381_C2.2AVIPD_237448_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2504:91381_C2.2AVIPD_237448.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM387597_C3H2A_vs_VPDINP_276912-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2504:87597_C3H2A_vs_VPDINP_276912-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM333849_4VED_237467_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2504:33849_4VED_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM391381.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2504:91381.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2504 2504_GSM333849_4VED_237467_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2504:33849_4VED_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM333848_4AED_237369_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2505:33848_4AED_237369.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM391380_C2.2AIPD_237467_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2505:91380_C2.2AIPD_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM391380_C2.2AIPD_237467_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2505:91380_C2.2AIPD_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM387596.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2505:87596.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM333848_4AED_237369_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2505:33848_4AED_237369.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM333848.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2505:33848.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM391380.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2505:91380.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM387596_C3H2A_vs_PDINP_277408-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2505:87596_C3H2A_vs_PDINP_277408-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2505 2505_GSM387596_C3H2A_vs_PDINP_277408-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2505:87596_C3H2A_vs_PDINP_277408-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333840_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2506:40.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333844_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2506:44.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333844.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2506:44.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333840.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2506:40.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333835_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2506:35.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333835.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2506:35.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333844_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2506:44.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333835_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2506:35.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2506 2506_GSM333840_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2506:40.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333864_507pell_271517_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:33864_507pell_271517.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333867_516pell_271522_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:33867_516pell_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM387598_C3H2A_vs_VPN_277877-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:87598_C3H2A_vs_VPN_277877-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333867.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:33867.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333866_508pell_271518_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:33866_508pell_271518.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333867_516pell_271522_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:33867_516pell_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM387598_C3H2A_vs_VPN_277877-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:87598_C3H2A_vs_VPN_277877-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333864.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:33864.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333866_508pell_271518_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2502:33866_508pell_271518.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333864_507pell_271517_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2502:33864_507pell_271517.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM333866.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:33866.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2502 2502_GSM387598_C3H2A_vs_VPN_277877-2.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2502:87598_C3H2A_vs_VPN_277877-2.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333843_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2503:43.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333839_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2503:39.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333839_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2503:39.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333836_VN_185168-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2503:36_VN_185168-3.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333836_VN_185168-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2503:36_VN_185168-3.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333843_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2503:43.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333839.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2503:39.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333843.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2503:43.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2503 2503_GSM333836.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2503:36.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM387597_C3H2A_vs_VPDINP_276912-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2504:87597_C3H2A_vs_VPDINP_276912-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM387597.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2504:87597.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM333849.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2504:33849.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. 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Chromatin structure +2504 2504_GSM391381_C2.2AVIPD_237448_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2504:91381_C2.2AVIPD_237448.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM387597_C3H2A_vs_VPDINP_276912-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2504:87597_C3H2A_vs_VPDINP_276912-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM333849_4VED_237467_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2504:33849_4VED_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM391381.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2504:91381.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2504 2504_GSM333849_4VED_237467_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2504:33849_4VED_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM333848_4AED_237369_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2505:33848_4AED_237369.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM391380_C2.2AIPD_237467_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2505:91380_C2.2AIPD_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM391380_C2.2AIPD_237467_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2505:91380_C2.2AIPD_237467.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM387596.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2505:87596.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM333848_4AED_237369_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2505:33848_4AED_237369.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM333848.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2505:33848.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM391380.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2505:91380.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM387596_C3H2A_vs_PDINP_277408-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2505:87596_C3H2A_vs_PDINP_277408-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2505 2505_GSM387596_C3H2A_vs_PDINP_277408-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2505:87596_C3H2A_vs_PDINP_277408-2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333840_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2506:40.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333844_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2506:44.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333844.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2506:44.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333840.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2506:40.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333835_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2506:35.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333835.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2506:35.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333844_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2506:44.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333835_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2506:35.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2506 2506_GSM333840_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2506:40.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure 2507 2507_NimbHX_090309DmBL3_150I5vN3_353360-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Compound=150-mM-salt#Developmental-Stage=Embryonic-stage-3-hr#Strain=B3#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2507.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Embryonic stage 3 hr Compound=150 mM salt#Developmental-Stage=Embryonic stage 3 hr#Strain=B3#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure 2507 2507_090309DmBL3_150I5vN3_353360-2_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Compound=150-mM-salt#Developmental-Stage=Embryonic-stage-3-hr#Strain=B3#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2507.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Embryonic stage 3 hr Compound=150 mM salt#Developmental-Stage=Embryonic stage 3 hr#Strain=B3#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure 2507 2507_NimbHX_090309DmBL6_150X5vN3_353394-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Compound=150-mM-salt#Developmental-Stage=Embryonic-stage-3-hr#Strain=B3#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-3:Cy5-dye:Dmel_r5.32:modENCODE_2507.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Embryonic stage 3 hr Compound=150 mM salt#Developmental-Stage=Embryonic stage 3 hr#Strain=B3#extract=soluble fraction#sampling-time-point=1-2 hours Rep-3 Dmel_r5.32 Henikoff, S. Chromatin structure @@ -4023,99 +4023,99 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2512 2512_NimbHX_060409Dm4-6PELL5vN3_283713-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Compound=600-mM-salt#Developmental-Stage=Extended-germ-band-stage#Strain=B3#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2512.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Extended germ band stage Compound=600 mM salt#Developmental-Stage=Extended germ band stage#Strain=B3#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure 2512 2512_NimbHX_082109Dm4-6_PELL5vN3_283680-4_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Compound=600-mM-salt#Developmental-Stage=Extended-germ-band-stage#Strain=B3#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-3:Cy3-dye:Dmel_r5.32:modENCODE_2512.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Extended germ band stage Compound=600 mM salt#Developmental-Stage=Extended germ band stage#Strain=B3#extract=precipitate#sampling-time-point=1-2 hours Rep-3 Dmel_r5.32 Henikoff, S. Chromatin structure 2512 2512_NimbHX_060409Dm4-6PELL5vN3_283713-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Compound=600-mM-salt#Developmental-Stage=Extended-germ-band-stage#Strain=B3#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2512.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Extended germ band stage Compound=600 mM salt#Developmental-Stage=Extended germ band stage#Strain=B3#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2513 2513_NimbHX_54Am_54A6_353360_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2513 2513_NimbHX_54Bm_54B6_353400_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2513 2513_54Am_54A6_353360_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2513.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2513 2513_NimbHX_54Bm_54B6_353400_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2513 2513_NimbHX_54Am_54A6_353360_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2513 2513_54Bm_54B6_353400_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2513.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2514 2514_NimbHX_54Bn_54B6_353629_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2514 2514_NimbHX_54Bn_54B6_353629_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2514 2514_NimbHX_54An_54A6_353374_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2514 2514_54Bn_54B6_353629_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2514.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2514 2514_NimbHX_54An_54A6_353374_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2514 2514_54An_54A6_353374_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2514.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2515 2515_NimbHX_54Ao_54A6_353394_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2515 2515_NimbHX_54BO_54B6_352810_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2515 2515_54Ao_54A6_353394_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2515.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2515 2515_54BO_54B6_352810_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2515.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2515 2515_NimbHX_54Ao_54A6_353394_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2515 2515_NimbHX_54BO_54B6_352810_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2516 2516_NimbHX_54Ap_54A6_353395_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2516 2516_NimbHX_54Bp_54B6_353279_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2516 2516_54Ap_54A6_353395_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2516.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2516 2516_NimbHX_54Bp_54B6_353279_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2516 2516_54Bp_54B6_353279_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2516.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2516 2516_NimbHX_54Ap_54A6_353395_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2517 2517_GSM387595_5-S2_80_270387.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2517:595_5-S2_80_270387.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2517 2517_GSM387600_C4_vs_80N_138967-5_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2517:600_C4_vs_80N_138967-5.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2517 2517_GSM387595_5-S2_80_270387_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2517:595_5-S2_80_270387.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2517 2517_GSM387595_5-S2_80_270387_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2517:595_5-S2_80_270387.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2517 2517_GSM387600_C4_vs_80N_138967-5.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2517:600_C4_vs_80N_138967-5.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2517 2517_GSM387600_C4_vs_80N_138967-5_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2517:600_C4_vs_80N_138967-5.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2518 2518_GSM333847_4NV80_237371_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2518:7_4NV80_237371.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2518 2518_GSM333846.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2518:6.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2518 2518_GSM333846_4NA80_237370_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2518:6_4NA80_237370.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2518 2518_GSM333847_4NV80_237371_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2518:7_4NV80_237371.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2518 2518_GSM333847.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2518:7.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2518 2518_GSM333846_4NA80_237370_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2518:6_4NA80_237370.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333851.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2519:51.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333858_1-AvN0.8_271522_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2519:58_1-AvN0.8_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333863.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2519:63.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333863_2-AvN80_271522_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2519:63_2-AvN80_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333851_0AVN_2347448_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2519:51_0AVN_2347448.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333863_2-AvN80_271522_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2519:63_2-AvN80_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333858_1-AvN0.8_271522_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2519:58_1-AvN0.8_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333858.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2519:58.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2519 2519_GSM333851_0AVN_2347448_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2519:51_0AVN_2347448.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333855_8D3N8_185156_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2520:5_8D3N8_185156.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333853_833N8_138377_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2520:3_833N8_138377.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333850_033N_237468_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2520:0_033N_237468.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333850_033N_237468_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2520:0_033N_237468.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333850.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2520:0.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333855.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2520:5.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333853_833N8_138377_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2520:3_833N8_138377.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333855_8D3N8_185156_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2520:5_8D3N8_185156.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2520 2520_GSM333853.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2520:3.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2521 2521_GSM333861_Nuc_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2521:61.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2521 2521_GSM333859.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2521:59.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2521 2521_GSM333861.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2521:61.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2521 2521_GSM333859_Nuc_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2521:59.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2521 2521_GSM333859_Input_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2521:59.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2521 2521_GSM333861_Input_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2521:61.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2522 2522_GSM387593_Input_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=3-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=3 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2522 2522_GSM387593.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=3-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2522.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=3 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2522 2522_GSM387593_Nuc_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=3-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=3 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2523 2523_GSM333854.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2523:4.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2523 2523_GSM333852_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2523:2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2523 2523_GSM333854_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2523:4.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2523 2523_GSM333852.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2523:2.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2523 2523_GSM333852_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2523:2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2523 2523_GSM333854_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2523:4.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2524 2524_GSM333856.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2524.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2524 2524_GSM333856_1-AvN0.6_269899_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2524.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2524 2524_GSM333856_1-AvN0.6_269899_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2524.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333842_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2525:42.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333832_Av-N_185168-1_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2525:32_Av-N_185168-1.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333838_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2525:38.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333842_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2525:42.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333842.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2525:42.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333838_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2525:38.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333832_Av-N_185168-1_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2525:32_Av-N_185168-1.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333838.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2525:38.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2525 2525_GSM333832.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2525:32.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2526 2526_GSM333834_H36_185170-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3:Cell-Line=Fly-biotin-tagged-H3#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2526.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3 Late Embryos Cell-Line=Fly biotin-tagged H3#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2526 2526_GSM333834.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3:Cell-Line=Fly-biotin-tagged-H3#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2526.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3 Late Embryos Cell-Line=Fly biotin-tagged H3#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2526 2526_GSM333834_H36_185170-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3:Cell-Line=Fly-biotin-tagged-H3#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2526.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3 Late Embryos Cell-Line=Fly biotin-tagged H3#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2527 2527_GSM387594_5-S2_600_271135_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2527.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2527 2527_GSM387594_5-S2_600_271135.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2527.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2527 2527_GSM387594_5-S2_600_271135_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2527.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2528 2528_GSM333837.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2528.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2528 2528_GSM333837_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2528.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2528 2528_GSM333837_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2528.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2529 2529_GSM333841_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2529.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2529 2529_GSM333841_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2529.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2529 2529_GSM333841.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle His2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2529.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array His2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2513 2513_NimbHX_54Am_54A6_353360_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2513 2513_NimbHX_54Bm_54B6_353400_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2513 2513_54Am_54A6_353360_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2513.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2513 2513_NimbHX_54Bm_54B6_353400_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2513 2513_NimbHX_54Am_54A6_353360_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2513.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2513 2513_54Bm_54B6_353400_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=80-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2513.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=80 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2514 2514_NimbHX_54Bn_54B6_353629_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2514 2514_NimbHX_54Bn_54B6_353629_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2514 2514_NimbHX_54An_54A6_353374_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2514 2514_54Bn_54B6_353629_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2514.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2514 2514_NimbHX_54An_54A6_353374_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2514.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2514 2514_54An_54A6_353374_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=150-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2514.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=150 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2515 2515_NimbHX_54Ao_54A6_353394_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2515 2515_NimbHX_54BO_54B6_352810_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2515 2515_54Ao_54A6_353394_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2515.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2515 2515_54BO_54B6_352810_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2515.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2515 2515_NimbHX_54Ao_54A6_353394_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2515 2515_NimbHX_54BO_54B6_352810_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=soluble-fraction#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2515.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=soluble fraction#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2516 2516_NimbHX_54Ap_54A6_353395_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2516 2516_NimbHX_54Bp_54B6_353279_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2516 2516_54Ap_54A6_353395_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2516.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2516 2516_NimbHX_54Bp_54B6_353279_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2516 2516_54Bp_54B6_353279_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2516.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2516 2516_NimbHX_54Ap_54A6_353395_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=ML-DmD16-c3#Compound=600-mM-salt#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#extract=precipitate#sampling-time-point=1-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2516.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Larvae 3rd instar Cell-Line=ML-DmD16-c3#Compound=600 mM salt#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#extract=precipitate#sampling-time-point=1-2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2517 2517_GSM387595_5-S2_80_270387.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2517:595_5-S2_80_270387.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2517 2517_GSM387600_C4_vs_80N_138967-5_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2517:600_C4_vs_80N_138967-5.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2517 2517_GSM387595_5-S2_80_270387_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2517:595_5-S2_80_270387.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2517 2517_GSM387595_5-S2_80_270387_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2517:595_5-S2_80_270387.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2517 2517_GSM387600_C4_vs_80N_138967-5.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2517:600_C4_vs_80N_138967-5.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2517 2517_GSM387600_C4_vs_80N_138967-5_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2517:600_C4_vs_80N_138967-5.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2518 2518_GSM333847_4NV80_237371_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2518:7_4NV80_237371.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2518 2518_GSM333846.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2518:6.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2518 2518_GSM333846_4NA80_237370_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2518:6_4NA80_237370.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2518 2518_GSM333847_4NV80_237371_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2518:7_4NV80_237371.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2518 2518_GSM333847.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2518:7.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2518 2518_GSM333846_4NA80_237370_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2A:Cell-Line=Fly-biotin-tagged-H2A#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2518:6_4NA80_237370.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2A Late Embryos Cell-Line=Fly biotin-tagged H2A#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333851.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2519:51.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333858_1-AvN0.8_271522_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2519:58_1-AvN0.8_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333863.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2519:63.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333863_2-AvN80_271522_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2519:63_2-AvN80_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333851_0AVN_2347448_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2519:51_0AVN_2347448.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333863_2-AvN80_271522_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2519:63_2-AvN80_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333858_1-AvN0.8_271522_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2519:58_1-AvN0.8_271522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2519 2519_GSM333858.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2519:58.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. 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Chromatin structure +2520 2520_GSM333850_033N_237468_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2520:0_033N_237468.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2520 2520_GSM333850.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2520:0.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. 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Chromatin structure +2520 2520_GSM333855_8D3N8_185156_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2520:5_8D3N8_185156.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. 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Chromatin structure +2521 2521_GSM333861.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2521:61.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2521 2521_GSM333859_Nuc_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2521:59.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. 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Chromatin structure +2521 2521_GSM333861_Input_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1.5-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2521:61.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1.5 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2522 2522_GSM387593_Input_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=3-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=3 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2522 2522_GSM387593.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=3-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2522.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=3 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2522 2522_GSM387593_Nuc_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=80-150-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=3-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2522.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=80-150 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=3 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2523 2523_GSM333854.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2523:4.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. 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Chromatin structure +2523 2523_GSM333854_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2523:4.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2523 2523_GSM333852.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2523:2.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2523 2523_GSM333852_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2523:2.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2523 2523_GSM333854_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2523:4.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2524 2524_GSM333856.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2524.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2524 2524_GSM333856_1-AvN0.6_269899_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2524.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2524 2524_GSM333856_1-AvN0.6_269899_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=80-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2524.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=80-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333842_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2525:42.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333832_Av-N_185168-1_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2525:32_Av-N_185168-1.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333838_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2525:38.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333842_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2525:42.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333842.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2525:42.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333838_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2525:38.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333832_Av-N_185168-1_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2525:32_Av-N_185168-1.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333838.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2525:38.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2525 2525_GSM333832.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2525:32.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2526 2526_GSM333834_H36_185170-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3:Cell-Line=Fly-biotin-tagged-H3#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2526.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3 Late Embryos Cell-Line=Fly biotin-tagged H3#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2526 2526_GSM333834.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H3:Cell-Line=Fly-biotin-tagged-H3#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2526.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H3 Late Embryos Cell-Line=Fly biotin-tagged H3#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2526 2526_GSM333834_H36_185170-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3:Cell-Line=Fly-biotin-tagged-H3#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2526.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3 Late Embryos Cell-Line=Fly biotin-tagged H3#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2527 2527_GSM387594_5-S2_600_271135_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2527.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2527 2527_GSM387594_5-S2_600_271135.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=S2-DRSC#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2527.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2527 2527_GSM387594_5-S2_600_271135_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=S2-DRSC#Compound=150-600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2527.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=S2-DRSC#Compound=150-600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2528 2528_GSM333837.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2528.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2528 2528_GSM333837_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2528.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2528 2528_GSM333837_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H3.3A:Cell-Line=Fly-biotin-tagged-H3.3#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2528.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H3.3A Late Embryos Cell-Line=Fly biotin-tagged H3.3#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2529 2529_GSM333841_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2529.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2529 2529_GSM333841_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2529.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2529 2529_GSM333841.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle H2Av:Cell-Line=Fly-biotin-tagged-H2Av#Compound=15-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-–-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2529.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array H2Av Late Embryos Cell-Line=Fly biotin-tagged H2Av#Compound=15 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 – 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure 2531 2531_NimbHX_SOH18_80_vs_SOH18_MT_247382-3_532.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Compound=80-mM-salt#Developmental-Stage=Mixed-Embryos#Strain=JJ2061#extract=soluble-fraction#sampling-time-point=18-hours:DNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2531:18_80_vs_SOH18_MT_247382-3.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Compound=80 mM salt#Developmental-Stage=Mixed Embryos#Strain=JJ2061#extract=soluble fraction#sampling-time-point=18 hours Rep-1 Cele_WS220 Henikoff, S. Chromatin structure 2531 2531_NimbHX_SOH36_80_vs_SOH36_MT_247383-2_532.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Compound=80-mM-salt#Developmental-Stage=Mixed-Embryos#Strain=JJ2061#extract=soluble-fraction#sampling-time-point=18-hours:DNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2531:36_80_vs_SOH36_MT_247383-2.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Compound=80 mM salt#Developmental-Stage=Mixed Embryos#Strain=JJ2061#extract=soluble fraction#sampling-time-point=18 hours Rep-1 Cele_WS220 Henikoff, S. Chromatin structure 2531 2531_NimbHX_SOH36_80_vs_SOH36_MT_247383-2_635.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Compound=80-mM-salt#Developmental-Stage=Mixed-Embryos#Strain=JJ2061#extract=soluble-fraction#sampling-time-point=18-hours:DNA-tiling-array:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2531:36_80_vs_SOH36_MT_247383-2.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Compound=80 mM salt#Developmental-Stage=Mixed Embryos#Strain=JJ2061#extract=soluble fraction#sampling-time-point=18 hours Rep-1 Cele_WS220 Henikoff, S. Chromatin structure @@ -4171,34 +4171,34 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2541 2541_OID24463_36092102_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_2541.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Chromatin structure 2541 2541_OID22177_362863_2009-07-25_14-35_Area1_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2541.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure 2543 2543_GSM360260.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Pupae-0-1-day#Strain=Canton-S#Tissue=Whole-organism:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2543.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Pupae 0-1 day Developmental-Stage=Pupae 0-1 day#Strain=Canton S#Tissue=Whole organism Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2544 2544_Orr-Weaver_251663510028_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=larval-salivary-gland:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2544.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2544 2544_salivary_244_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2544.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2544 2544_Orr-Weaver_251663510028_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=larval-salivary-gland:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2544.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2544 2544_salivary_244_trough_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2544.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2545 2545_Orr-Weaver_251476110026_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=larval-salivary-gland:CGH:Rep-2:Cy3:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=larval salivary gland Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2545 2545_Orr-Weaver_251476110010_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=larval-salivary-gland:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2545 2545_Orr-Weaver_251476110026_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=larval-salivary-gland:CGH:Rep-2:Cy5:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=larval salivary gland Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2545 2545_salivary_188_trough_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2545.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2545 2545_Orr-Weaver_251476110010_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=larval-salivary-gland:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2545 2545_salivary_188_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2545.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2544 2544_Orr-Weaver_251663510028_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=Larval-salivary-gland:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2544.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2544 2544_salivary_244_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=Larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2544.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2544 2544_Orr-Weaver_251663510028_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=Larval-salivary-gland:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2544.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2544 2544_salivary_244_trough_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Tissue=Larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2544.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2545 2545_Orr-Weaver_251476110026_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=Larval-salivary-gland:CGH:Rep-2:Cy3:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=Larval salivary gland Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2545 2545_Orr-Weaver_251476110010_532.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=Larval-salivary-gland:CGH:Rep-1:Cy3:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2545 2545_Orr-Weaver_251476110026_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=Larval-salivary-gland:CGH:Rep-2:Cy5:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=Larval salivary gland Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2545 2545_salivary_188_trough_peaks.gff.gz D.melanogaster/Copy-Number-Variation/CGH/gene-model_gff3 Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=Larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2545.gff3.gz gene-model_gff3 D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2545 2545_Orr-Weaver_251476110010_635.txt.gz D.melanogaster/Copy-Number-Variation/CGH/raw-arrayfile_pair Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=Larval-salivary-gland:CGH:Rep-1:Cy5:Dmel_r5.32:modENCODE_2545.pair.gz raw-arrayfile_pair D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2545 2545_salivary_188_MA2Cscore.wig.gz D.melanogaster/Copy-Number-Variation/CGH/normalized-arrayfile_wiggle Replication-Copy-Number:Developmental-Stage=Embryos-0-4-hr#Strain=Oregon-R-Orr-Weaver#Tissue=Larval-salivary-gland:CGH:Rep-1::Dmel_r5.32:modENCODE_2545.wig.gz normalized-arrayfile_wiggle D. melanogaster Copy Number Variation CGH Replication-Copy-Number Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=Oregon-R Orr-Weaver#Tissue=Larval salivary gland Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation 2546 2546_GSM360257.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Larvae-1st-instar#Strain=Canton-S#Tissue=Whole-organism:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2546.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 1st instar Developmental-Stage=Larvae 1st instar#Strain=Canton S#Tissue=Whole organism Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2548 2548_emb-PhM-143_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:143_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_534DMM0143-20090326-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2548:143-20090326-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_534DMM0204-20090714-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2548:204-20090714-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_emb-PhM-142_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:142_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_emb-PhM-204_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:204_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_emb-PhM_tars_maxgap30_minrun100_thresh8.36.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_emb-PhM_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -2548 2548_534DMM0142-20090326-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2548:142-20090326-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_emb-PhM-143_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:143_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_534DMM0143-20090326-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2548:143-20090326-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_534DMM0204-20090714-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2548:204-20090714-CeT.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_emb-PhM-142_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:142_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_emb-PhM-204_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:204_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_emb-PhM_tars_maxgap30_minrun100_thresh8.36.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_emb-PhM_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2548:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +2548 2548_534DMM0142-20090326-Cel.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1293#Tissue=Pharyngeal-muscle#temperature=25-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_2548:142-20090326-Cel.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1293#Tissue=Pharyngeal muscle#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling 2549 2549_celniker_cage_fwd.wig.gz D.melanogaster/mRNA/CAGE/coverage-graph_wiggle 5-prime-UTR:Developmental-Stage=Mixed-Embryos-0-24-hr#Strain=Y-cn-bw-sp:CAGE:Rep-1::Dmel_r5.32:modENCODE_2549:f.wig.gz coverage-graph_wiggle D. melanogaster mRNA CAGE 5-prime-UTR Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2549 2549_celniker_cage.sam.gz D.melanogaster/mRNA/CAGE/alignment_sam 5-prime-UTR:Developmental-Stage=Mixed-Embryos-0-24-hr#Strain=Y-cn-bw-sp:CAGE:Rep-1::Dmel_r5.32:modENCODE_2549.sam.gz alignment_sam D. melanogaster mRNA CAGE 5-prime-UTR Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2549 2549_celniker_cage_bkwd.wig.gz D.melanogaster/mRNA/CAGE/coverage-graph_wiggle 5-prime-UTR:Developmental-Stage=Mixed-Embryos-0-24-hr#Strain=Y-cn-bw-sp:CAGE:Rep-1::Dmel_r5.32:modENCODE_2549:bk.wig.gz coverage-graph_wiggle D. melanogaster mRNA CAGE 5-prime-UTR Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2551 2551_DM22.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_2551.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2551 2551_s2_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2551.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2551 2551_DM16.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2551.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2552 2552_kc_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2552.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2552 2552_DM25.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_2552.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation -2552 2552_DM14.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2552.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2551 2551_DM22.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_2551.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2551 2551_s2_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2551.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2551 2551_DM16.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2551.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2552 2552_kc_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2552.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2552 2552_DM25.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_2552.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +2552 2552_DM14.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2552.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation 2553 2553_DM26.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_2553.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation 2553 2553_DM15.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2553.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation 2553 2553_bg3_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_2553.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation @@ -4286,13 +4286,13 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2567 2567_HDAC_Input_0-12h_1.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HDAC11:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-3:input:Dmel_r5.32:modENCODE_2567.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HDAC11 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 White, K. Other chromatin binding sites 2567 2567_HDAC__495.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HDAC11:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2567.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HDAC11 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites 2567 2567_Input_0-12h_Input_2.CEL.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HDAC11:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2567:Input_0-12h_Input_2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HDAC11 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -2568 2568_KC167_Trl_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. TF binding sites -2568 2568_KC167_Input_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. TF binding sites -2568 2568_MAT_Kc167_Trl.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.1based.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2568.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites -2568 2568_KC167_Trl_C.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. TF binding sites -2568 2568_KC167_Trl_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites -2568 2568_MAT_Kc167_Trl.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2568.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites -2568 2568_KC167_Input_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites +2568 2568_KC167_Trl_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. TF binding sites +2568 2568_KC167_Input_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-2:input:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 White, K. TF binding sites +2568 2568_MAT_Kc167_Trl.Dm_tiling2_MR_v01_dm3.NR.bpmap_matscore.bar.txt_IGB.wig.1based.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2568.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites +2568 2568_KC167_Trl_C.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 White, K. TF binding sites +2568 2568_KC167_Trl_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites +2568 2568_MAT_Kc167_Trl.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2568.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites +2568 2568_KC167_Input_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2568.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GAF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. TF binding sites 2569 2569_0-4h_bks_1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2569.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2569 2569_E0-4_bks_pvalue_Dm_BDGPv5.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Brakeless:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2569.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2569 2569_0-4h_bks_3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Brakeless:Developmental-Stage=Embryos-0-4-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_2569.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Brakeless Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-3 Dmel_r5.32 White, K. TF binding sites @@ -4329,14 +4329,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2573 2573_0-8h_gatae_B2.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GATAe:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2573.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GATAe Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites 2573 2573_Input_0-8h_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GATAe:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2573:nput_0-8h_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GATAe Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2573 2573_ISO1_0-8_Input_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL GATAe:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2573:SO1_0-8_Input_A.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip GATAe Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -2574 2574_0-8h_h_B3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2574.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -2574 2574_ISO1_0-8_Input_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2574:SO1_0-8_Input_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -2574 2574_Input_0-8h_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2574:nput_0-8h_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -2574 2574_0-8h_h_B4.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2574.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -2574 2574_ISO1_0-8_h.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_2574.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-3 Dmel_r5.32 White, K. TF binding sites -2574 2574_E0-8_h_signal.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2574.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -2574 2574_E0-8_h_pvalue_Dm_BDGPv5.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2574.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites -2574 2574_ISO1_0-8_Input_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2574:SO1_0-8_Input_A.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +2574 2574_0-8h_h_B3.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2574.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +2574 2574_ISO1_0-8_Input_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2574:SO1_0-8_Input_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +2574 2574_Input_0-8h_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2574:nput_0-8h_B.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +2574 2574_0-8h_h_B4.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2574.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites +2574 2574_ISO1_0-8_h.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-3:ChIP:Dmel_r5.32:modENCODE_2574.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-3 Dmel_r5.32 White, K. TF binding sites +2574 2574_E0-8_h_signal.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2574.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +2574 2574_E0-8_h_pvalue_Dm_BDGPv5.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2574.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +2574 2574_ISO1_0-8_Input_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL hairy:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2574:SO1_0-8_Input_A.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip hairy Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2575 2575_E0-8_hkb_pvalue_Dm_BDGPv5.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 Huckebein:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2575.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip Huckebein Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2575 2575_0-8h_hkb_C1.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL Huckebein:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2575.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip Huckebein Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2575 2575_E0-8_hkb_signal.bar.txt_IGB.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/normalized-arrayfile_wiggle Huckebein:Developmental-Stage=Embryos-0-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2575.wig.gz normalized-arrayfile_wiggle D. melanogaster Transcriptional Factor ChIP-chip Huckebein Embryos 0-8 hr Developmental-Stage=Embryos 0-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites @@ -4359,23 +4359,23 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2577 2577_E4-8_sens_pvalue_Dm_BDGPv5.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/computed-peaks_gff3 senseless:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2577.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-chip senseless Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2577 2577_ISO1_4-8_sens_A.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL senseless:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2577.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip senseless Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 2577 2577_ISO1_4-8_sens_B.CEL.gz D.melanogaster/Transcriptional-Factor/ChIP-chip/raw-arrayfile_CEL senseless:Developmental-Stage=Embryos-4-8-hr:ChIP-chip:Rep-2:ChIP:Dmel_r5.32:modENCODE_2577.CEL.gz raw-arrayfile_CEL D. melanogaster Transcriptional Factor ChIP-chip senseless Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr Rep-2 Dmel_r5.32 White, K. TF binding sites -2585 2585_ISO1_8-16_Ez-A-252178110134.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt Enhancer-of-zeste:Developmental-Stage=Embryos-8-16-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_2585.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer of zeste Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -2585 2585_ISO1_8-16_Ez-C-252178110157.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt Enhancer-of-zeste:Developmental-Stage=Embryos-8-16-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_2585:C-252178110157.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer of zeste Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -2585 2585_ISO1_8-16_Ez-B-252178110155.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt Enhancer-of-zeste:Developmental-Stage=Embryos-8-16-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_2585:B-252178110155.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer of zeste Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites -2586 2586_SRR015108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2586:08.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -2586 2586_SRR015106.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2586:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2586 2586_SRR015112.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2586:12.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -2586 2586_SRR015110.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2586:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -2586 2586_SRR015104.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2586:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2592 2592_SRR015080.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2592:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -2592 2592_SRR015076.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2592:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2592 2592_SRR015078.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2592:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2592 2592_SRR015074.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2592:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2592 2592_SRR015082.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2592:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -2593 2593_SRR015090.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2593.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -2593 2593_SRR015084.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2593:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2593 2593_SRR015086.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2593:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2593 2593_SRR015088.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2593:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2585 2585_ISO1_8-16_Ez-A-252178110134.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt Enhancer-of-zeste:Developmental-Stage=Embryos-8-16-hr:ChIP-chip:Rep-1:cy3:Dmel_r5.32:modENCODE_2585.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +2585 2585_ISO1_8-16_Ez-C-252178110157.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt Enhancer-of-zeste:Developmental-Stage=Embryos-8-16-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_2585:C-252178110157.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +2585 2585_ISO1_8-16_Ez-B-252178110155.txt.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile-agilent_txt Enhancer-of-zeste:Developmental-Stage=Embryos-8-16-hr:ChIP-chip:Rep-2:cy5:Dmel_r5.32:modENCODE_2585:B-252178110155.agilent.gz raw-arrayfile-agilent_txt D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-2 Dmel_r5.32 White, K. Other chromatin binding sites +2586 2586_SRR015108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2586:08.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +2586 2586_SRR015106.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2586:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2586 2586_SRR015112.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2586:12.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +2586 2586_SRR015110.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2586:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +2586 2586_SRR015104.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2586:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2592 2592_SRR015080.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2592:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +2592 2592_SRR015076.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2592:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2592 2592_SRR015078.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2592:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2592 2592_SRR015074.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2592:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2592 2592_SRR015082.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2592:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +2593 2593_SRR015090.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2593.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +2593 2593_SRR015084.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2593:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2593 2593_SRR015086.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2593:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +2593 2593_SRR015088.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2593:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2594 2594_SRR015100.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2594:100.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 2594 2594_SRR015102.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2594:102.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 2594 2594_SRR015096.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2594:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -4387,12 +4387,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2597 2597_Snyder_HLH-8_POLII_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Larvae-L3-stage#Strain=OP74#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2597:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP74#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2597 2597_Snyder_HLH-8_Input_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Larvae-L3-stage#Strain=OP74#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2597:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP74#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2597 2597_Snyder_HLH-8_POLII_L3_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle AMA-1:Developmental-Stage=Larvae-L3-stage#Strain=OP74#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2597.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq AMA-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP74#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -2598 2598_Snyder_PHA4_GFP_lemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryos#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2598:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryos#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2598 2598_Snyder_PHA4_Input_lemb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryos#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2598:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryos#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2598 2598_Snyder_PHA4_GFP_lemb_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 PHA-4:Developmental-Stage=Late-Embryos#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2598.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryos#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2598 2598_Snyder_PHA4_Input_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryos#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2598:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryos#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2598 2598_Snyder_PHA4_GFP_lemb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryos#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2598.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryos#Strain=OP37#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -2598 2598_Snyder_PHA4_GFP_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryos#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2598:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryos#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2598 2598_Snyder_PHA4_GFP_lemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryonic-stage#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2598:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2598 2598_Snyder_PHA4_Input_lemb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryonic-stage#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2598:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2598 2598_Snyder_PHA4_GFP_lemb_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 PHA-4:Developmental-Stage=Late-Embryonic-stage#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2598.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2598 2598_Snyder_PHA4_Input_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryonic-stage#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2598:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2598 2598_Snyder_PHA4_GFP_lemb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryonic-stage#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2598.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP37#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +2598 2598_Snyder_PHA4_GFP_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle PHA-4:Developmental-Stage=Late-Embryonic-stage#Strain=OP37#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2598:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq PHA-4 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP37#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2600 2600_Snyder_MEP-1_Input_emb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle MEP-1:Developmental-Stage=Embryos#Strain=OP70#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2600:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq MEP-1 Embryos Developmental-Stage=Embryos#Strain=OP70#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2600 2600_Snyder_MEP-1_GFP_emb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle MEP-1:Developmental-Stage=Embryos#Strain=OP70#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2600.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq MEP-1 Embryos Developmental-Stage=Embryos#Strain=OP70#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 2600 2600_Snyder_MEP-1_GFP_emb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle MEP-1:Developmental-Stage=Embryos#Strain=OP70#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2600:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq MEP-1 Embryos Developmental-Stage=Embryos#Strain=OP70#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -4416,14 +4416,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2604 2604_AB9048_H3K36ME1206009_N2_EEMB_1.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2604.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2604 2604_OID25717_16702301_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2604.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2604 2604_OID25717_16702301_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2604.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -2605 2605_GSM385822.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2605:822.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2605 2605_GSM385821.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=ovary:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_2605.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=ovary Rep-3 Dmel_r5.32 Lai, E. RNA expression profiling -2605 2605_GSM385744.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2605:744.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2605 2605_GSM385748.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=ovary:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2605.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=ovary Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling -2606 2606_GSM399100.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2606.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2606 2606_GSM399101.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2606.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling -2608 2608_GSM343833.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2608.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling -2608 2608_GSM343832.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2608.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2605 2605_GSM385822.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2605:822.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2605 2605_GSM385821.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_2605.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-3 Dmel_r5.32 Lai, E. RNA expression profiling +2605 2605_GSM385744.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2605:744.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2605 2605_GSM385748.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2605.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +2606 2606_GSM399100.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2606.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2606 2606_GSM399101.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2606.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +2608 2608_GSM343833.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2608.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +2608 2608_GSM343832.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2608.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2610 2610_Snyder_LIN-15B_GFP_L3_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle LIN-15B:Developmental-Stage=Larvae-L3-stage#Strain=OP184#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2610:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq LIN-15B Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP184#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2610 2610_Snyder_LIN-15B_GFP_L3_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle LIN-15B:Developmental-Stage=Larvae-L3-stage#Strain=OP184#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2610.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq LIN-15B Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP184#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 2610 2610_Snyder_LIN-15B_Input_L3.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle LIN-15B:Developmental-Stage=Larvae-L3-stage#Strain=OP184#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2610:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq LIN-15B Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP184#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -4448,12 +4448,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2614 2614_Snyder_ELT-3_GFP_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ELT-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP75#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2614:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ELT-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP75#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2614 2614_Snyder_ELT-3_GFP_L1_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ELT-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP75#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2614.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ELT-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP75#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2614 2614_Snyder_ELT-3_Input_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ELT-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP75#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2614:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ELT-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP75#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2620 2620_Snyder_CEH-30_GFP_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryos#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2620:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryos#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2620 2620_Snyder_CEH-30_GFP_lemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryos#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2620:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryos#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2620 2620_Snyder_CEH-30_GFP_lemb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryos#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2620.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryos#Strain=OP120#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -2620 2620_Snyder_CEH-30_GFP_lemb_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-30:Developmental-Stage=Late-Embryos#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2620.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryos#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2620 2620_Snyder_CEH-30_Input_lemb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryos#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2620:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryos#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -2620 2620_Snyder_CEH-30_Input_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryos#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2620:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryos#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2620 2620_Snyder_CEH-30_GFP_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryonic-stage#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2620:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2620 2620_Snyder_CEH-30_GFP_lemb_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryonic-stage#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2620:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2620 2620_Snyder_CEH-30_GFP_lemb_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryonic-stage#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_2620.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP120#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +2620 2620_Snyder_CEH-30_GFP_lemb_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-30:Developmental-Stage=Late-Embryonic-stage#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2620.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2620 2620_Snyder_CEH-30_Input_lemb.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryonic-stage#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2620:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +2620 2620_Snyder_CEH-30_Input_lemb_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-30:Developmental-Stage=Late-Embryonic-stage#Strain=OP120#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2620:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-30 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP120#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2621 2621_Snyder_EGL-27_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle EGL-27:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP177#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_2621:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq EGL-27 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP177#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2621 2621_Snyder_EGL-27_GFP_L1_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle EGL-27:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP177#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_2621:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq EGL-27 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP177#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 2621 2621_Snyder_EGL-27_GFP_L1_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 EGL-27:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP177#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_2621.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq EGL-27 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP177#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -4515,24 +4515,24 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2637 2637_SRR034719.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq Caudal:Developmental-Stage=Embryos-4-8-hr#Strain=7T-CAD:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_2637.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq Caudal Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=7T-CAD Rep-2 Dmel_r5.32 White, K. TF binding sites 2637 2637_E4-8h_7T_peaks.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 Caudal:Developmental-Stage=Embryos-4-8-hr#Strain=7T-CAD:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2637.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq Caudal Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=7T-CAD Rep-1 Dmel_r5.32 White, K. TF binding sites 2637 2637_E4-8h_7T_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle Caudal:Developmental-Stage=Embryos-4-8-hr#Strain=7T-CAD:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2637.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq Caudal Embryos 4-8 hr Developmental-Stage=Embryos 4-8 hr#Strain=7T-CAD Rep-1 Dmel_r5.32 White, K. TF binding sites -2638 2638_S2_CTCF200_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2638.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -2638 2638_S2_CTCF200_peaks.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2638.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -2639 2639_SRR034725.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2639.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -2639 2639_S2_CTCF500_peaks.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2639.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites -2639 2639_S2_CTCF500_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2639.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +2638 2638_S2_CTCF200_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2638.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +2638 2638_S2_CTCF200_peaks.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2638.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +2639 2639_SRR034725.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2639.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +2639 2639_S2_CTCF500_peaks.bed.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2639.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites +2639 2639_S2_CTCF500_density.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/coverage-graph_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2639.wig.gz coverage-graph_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-seq CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 White, K. Other chromatin binding sites 2640 2640_W3L_EcRGFP_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle eGFP:Developmental-Stage=Larvae-L3-stage#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2640.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq eGFP Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites 2640 2640_SRR034743.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=Larvae-L3-stage#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2640:3.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites 2640 2640_W3L_EcRGFP_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 eGFP:Developmental-Stage=Larvae-L3-stage#Strain=EcR-GFP:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2640.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq eGFP Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites 2640 2640_SRR034741.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=Larvae-L3-stage#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2640:1.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2641 2641_WPP_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle eGFP:Developmental-Stage=Pupae,-White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2641.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq eGFP Pupae, White prepupae (WPP) 10-11 hr Developmental-Stage=Pupae, White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2641 2641_SRR034734.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=Pupae,-White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2641.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP Pupae, White prepupae (WPP) 10-11 hr Developmental-Stage=Pupae, White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2641 2641_SRR034737.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=Pupae,-White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2641:7.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP Pupae, White prepupae (WPP) 10-11 hr Developmental-Stage=Pupae, White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2641 2641_WPP_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 eGFP:Developmental-Stage=Pupae,-White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2641.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq eGFP Pupae, White prepupae (WPP) 10-11 hr Developmental-Stage=Pupae, White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2641 2641_SRR034736.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=Pupae,-White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2641:6.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP Pupae, White prepupae (WPP) 10-11 hr Developmental-Stage=Pupae, White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2642 2642_SRR034729.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=DevStageFly#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2642:29.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP DevStageFly Developmental-Stage=DevStageFly#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2642 2642_SRR034731.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=DevStageFly#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2642:31.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP DevStageFly Developmental-Stage=DevStageFly#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2642 2642_WPP30-33_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle eGFP:Developmental-Stage=DevStageFly#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2642.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq eGFP DevStageFly Developmental-Stage=DevStageFly#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites -2642 2642_WPP30-33_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 eGFP:Developmental-Stage=DevStageFly#Strain=EcR-GFP:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2642.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq eGFP DevStageFly Developmental-Stage=DevStageFly#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2641 2641_WPP_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle eGFP:Developmental-Stage=White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2641.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 10-11 hr Developmental-Stage=White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2641 2641_SRR034734.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2641.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 10-11 hr Developmental-Stage=White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2641 2641_SRR034737.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2641:7.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 10-11 hr Developmental-Stage=White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2641 2641_WPP_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 eGFP:Developmental-Stage=White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2641.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 10-11 hr Developmental-Stage=White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2641 2641_SRR034736.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=White-prepupae-(WPP)-10-11-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2641:6.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 10-11 hr Developmental-Stage=White prepupae (WPP) 10-11 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2642 2642_SRR034729.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=White-prepupae-(WPP)-30-33-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2642:29.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 30-33 hr Developmental-Stage=White prepupae (WPP) 30-33 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2642 2642_SRR034731.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq eGFP:Developmental-Stage=White-prepupae-(WPP)-30-33-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2642:31.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 30-33 hr Developmental-Stage=White prepupae (WPP) 30-33 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2642 2642_WPP30-33_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle eGFP:Developmental-Stage=White-prepupae-(WPP)-30-33-hr#Strain=EcR-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2642.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 30-33 hr Developmental-Stage=White prepupae (WPP) 30-33 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +2642 2642_WPP30-33_density.bed.gff3.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 eGFP:Developmental-Stage=White-prepupae-(WPP)-30-33-hr#Strain=EcR-GFP:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2642.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq eGFP White prepupae (WPP) 30-33 hr Developmental-Stage=White prepupae (WPP) 30-33 hr#Strain=EcR-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites 2646 2646_AB9045_H3K9ME1291918_N2_EEMB_2.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2646.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K9me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2646 2646_OID25717_16705401_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2646.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2646 2646_OID25717_16705401_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2646.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement @@ -4553,14 +4553,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2648 2648_734.pirrota_995_Elate4_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2648:734.pirrota_995_Elate4_Chro_Chriz_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2648 2648_733.pirrota_994_Elate1_Chro_Chriz_BR.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2648:733.pirrota_994_Elate1_Chro_Chriz_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2648 2648_172.pirrota_344_E5_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2648:172.pirrota_344_E5_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_395.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650:395.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_673.pirrota_918_B4_EZ-R1-3.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2650:673.pirrota_918_B4_EZ-R1-3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_395.pirrota_588_B3_EZ.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2650:395.pirrota_588_B3_EZ.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_673.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650:673.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_repset.4621687.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_671.pirrota_916_B4_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2650:671.pirrota_916_B4.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_405.pirrota_620_B3_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2650:405.pirrota_620_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2650 2650_repset.4621687.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Ez:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650:repset.4621687.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Ez Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_395.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650:395.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_673.pirrota_918_B4_EZ-R1-3.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2650:673.pirrota_918_B4_EZ-R1-3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_395.pirrota_588_B3_EZ.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2650:395.pirrota_588_B3_EZ.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_673.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650:673.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_repset.4621687.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_671.pirrota_916_B4_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2650:671.pirrota_916_B4.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_405.pirrota_620_B3_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2650:405.pirrota_620_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2650 2650_repset.4621687.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2650:repset.4621687.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2651 2651_253.pirrota_437_B3_INPUT.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2651:253.pirrota_437_B3_INPUT.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2651 2651_259.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2651:259.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2651 2651_repset.9273879.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2651.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -4593,14 +4593,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2654 2654_repset.8290389.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2654.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2654 2654_406.pirrota_621_B5_Input-18cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2654:6.pirrota_621_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2654 2654_repset.8290389.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2654:repset.8290389.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_641.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655:641.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_574.pirrota_804_A12_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2655:574.pirrota_804_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2655:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_repset.8290388.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655:repset.8290388.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_repset.8290388.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_644.pirrota_873_S15_Input-18cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2655:644.pirrota_873_S15_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_641.pirrota_870_S15_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2655:641.pirrota_870_S15.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2655 2655_574.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655:574.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_641.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655:641.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_574.pirrota_804_A12_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2655:574.pirrota_804_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_362.pirrota_540_A12_Input18.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2655:362.pirrota_540_A12_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_repset.8290388.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655:repset.8290388.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_repset.8290388.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_644.pirrota_873_S15_Input-18cycles.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2655:644.pirrota_873_S15_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_641.pirrota_870_S15_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2655:641.pirrota_870_S15.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2655 2655_574.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2655:574.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2656 2656_96.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me2:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2656:96.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me2 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2656 2656_108.pirrota_263_E3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2656:108.pirrota_263_E3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2656 2656_96.pirrota_251_E3_H3K4me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2656:96.pirrota_251_E3.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -4620,14 +4620,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2657 2657_137.pirrota_284_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2657:37.pirrota_284.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2657 2657_repset.4161958.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2657.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2657 2657_193.pirrota_377_LarvaeTrial_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2657:93.pirrota_377_LarvaeTrial.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_repset.4161604.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_repset.4161604.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658:repset.4161604.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_144.pirrota_299_S11_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2658:44.pirrota_299_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_153.pirrota_308_S14_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2658:53.pirrota_308_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_153.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658:153.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2658:8.pirrota_303_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_144.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658:144.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2658 2658_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2658:3.pirrota_298_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_repset.4161604.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_repset.4161604.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658:repset.4161604.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_144.pirrota_299_S11_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2658:44.pirrota_299_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_153.pirrota_308_S14_H3K79Me.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2658:53.pirrota_308_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_153.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658:153.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_148.pirrota_303_S14_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2658:8.pirrota_303_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_144.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2658:144.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2658 2658_143.pirrota_298_S11_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2658:3.pirrota_298_S11.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2659 2659_repset.9273877.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2659:repset.9273877.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2659 2659_628.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2659:628.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2659 2659_repset.9273877.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2659.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -4638,17 +4638,17 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2659 2659_423.pirrota_646_B3_Input2_20cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2659:423.pirrota_646_B3_Input2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2659 2659_628.pirrota_857_B5_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2659:628.pirrota_857_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2659 2659_770.pirrota_1008_B5_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2659:770.pirrota_1008_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_repset.7766214.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_580.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:580.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_repset.7766214.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:repset.7766214.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_717.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:717.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_581.pirrota_811_A15_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2660:581.pirrota_811_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_580.pirrota_810_A14_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2660:580.pirrota_810_A14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_373.pirrota_584_A14_Input_20cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2660:373.pirrota_584_A14_Input_20cycles_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_717.pirrota_956_A18_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2660:717.pirrota_956_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2660:453.pirrota_684_A15_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_728.pirrota_967_A18_Input_20cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2660:728.pirrota_967_A18_Input_20cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2660 2660_581.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:581.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_repset.7766214.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_580.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:580.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_repset.7766214.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:repset.7766214.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_717.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:717.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_581.pirrota_811_A15_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2660:581.pirrota_811_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_580.pirrota_810_A14_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2660:580.pirrota_810_A14.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_373.pirrota_584_A14_Input_20cycles_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2660:373.pirrota_584_A14_Input_20cycles_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_717.pirrota_956_A18_H3K9acS10P.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2660:717.pirrota_956_A18.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2660:453.pirrota_684_A15_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_728.pirrota_967_A18_Input_20cyc_.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2660:728.pirrota_967_A18_Input_20cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2660 2660_581.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2660:581.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2661 2661_648.pirrota_877_E_late_2_H3K9me2.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2661:648.pirrota_877_E_late_2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2661 2661_repset.8061133.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2661:repset.8061133.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2661 2661_108.pirrota_263_E3_Input.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2661:108.pirrota_263_E3_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -4713,40 +4713,40 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2666 2666_325.pirrota_504_B2_HP1.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2666:325.pirrota_504_B2_HP1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2666 2666_repset.4620428.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2666.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2666 2666_324.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2666:324.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_718.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:718.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_593.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:593.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_592.pirrota_821_CL8-1_Hp1a_191_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2667:592.pirrota_821_CL8-1_Hp1a_191_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_repset.8061130.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:repset.8061130.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_597.pirrota_826_CL8-2_Input_DNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2667:7.pirrota_826_CL8-2_Input_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_repset.8061130.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_596.pirrota_825_CL8-1_InputDNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2667:6.pirrota_825_CL8-1_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_718.pirrota_957_CI8-1_HP1a.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2667:718.pirrota_957_CI8-1_HP1a.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_593.pirrota_822_CL8-2_Hp1a_191_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2667:593.pirrota_822_CL8-2_Hp1a_191_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2667 2667_592.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:592.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_repset.4621227.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_369.pirrota_580_A14_HP1a_wa184_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2668:9.pirrota_580_A14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_373.pirrota_584_A14_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2668:373.pirrota_584_A14_Input_20cycles_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_368.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668:368.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_368.pirrota_579_S12_HP1a_wa184_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2668:8.pirrota_579_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_369.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668:369.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_repset.4621227.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668:repset.4621227.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2668 2668_86.pirrota_243_S12_Input_20_cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2668:86.pirrota_243_S12_Input_20_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_repset.9273386.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669:repset.9273386.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_597.pirrota_826_CL8-2_Input_DNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2669:7.pirrota_826_CL8-2_Input_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_repset.9273386.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_596.pirrota_825_CL8-1_InputDNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2669:6.pirrota_825_CL8-1_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_661.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669:661.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_660.pirrota_905_Cl8-1_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2669:0.pirrota_905_Cl8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_660.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669:660.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2669 2669_661.pirrota_906_Cl8-2_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2669:1.pirrota_906_Cl8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_424.pirrota_647_Kc2_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2670:424.pirrota_647_Kc2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_656.pirrota_901_Kc2_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2670:656.pirrota_901_Kc2_HP.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_656.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670:656.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_589.pirrota_818_88Kc1_Hp1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2670:589.pirrota_818_88Kc1_Hp.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_repset.9273382.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670:repset.9273382.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_589.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670:589.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_repset.9273382.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2670 2670_389.pirrota_600_Kc1_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2670:389.pirrota_600_Kc1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_718.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:718.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_593.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:593.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_592.pirrota_821_CL8-1_Hp1a_191_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2667:592.pirrota_821_CL8-1_Hp1a_191_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_repset.8061130.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:repset.8061130.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_597.pirrota_826_CL8-2_Input_DNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2667:7.pirrota_826_CL8-2_Input_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_repset.8061130.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_596.pirrota_825_CL8-1_InputDNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2667:6.pirrota_825_CL8-1_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_718.pirrota_957_CI8-1_HP1a.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2667:718.pirrota_957_CI8-1_HP1a.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_593.pirrota_822_CL8-2_Hp1a_191_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2667:593.pirrota_822_CL8-2_Hp1a_191_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2667 2667_592.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2667:592.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_repset.4621227.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_369.pirrota_580_A14_HP1a_wa184_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2668:9.pirrota_580_A14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_373.pirrota_584_A14_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2668:373.pirrota_584_A14_Input_20cycles_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_368.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668:368.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_368.pirrota_579_S12_HP1a_wa184_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2668:8.pirrota_579_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_369.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668:369.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_repset.4621227.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2668:repset.4621227.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2668 2668_86.pirrota_243_S12_Input_20_cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2668:86.pirrota_243_S12_Input_20_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_repset.9273386.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669:repset.9273386.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_597.pirrota_826_CL8-2_Input_DNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2669:7.pirrota_826_CL8-2_Input_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_repset.9273386.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_596.pirrota_825_CL8-1_InputDNA_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2669:6.pirrota_825_CL8-1_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_661.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669:661.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_660.pirrota_905_Cl8-1_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2669:0.pirrota_905_Cl8-1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_660.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2669:660.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2669 2669_661.pirrota_906_Cl8-2_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2669:1.pirrota_906_Cl8-2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_424.pirrota_647_Kc2_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2670:424.pirrota_647_Kc2.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_656.pirrota_901_Kc2_HP1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2670:656.pirrota_901_Kc2_HP.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_656.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670:656.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_589.pirrota_818_88Kc1_Hp1c.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2670:589.pirrota_818_88Kc1_Hp.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_repset.9273382.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670:repset.9273382.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_589.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670:589.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_repset.9273382.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2670.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2670 2670_389.pirrota_600_Kc1_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2670:389.pirrota_600_Kc1.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2671 2671_554.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2671:554.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2671 2671_554.pirrota_787_B3_Su_var_3-7.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2671:4.pirrota_787_B3.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2671 2671_391.pirrota_602_B5_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2671:391.pirrota_602_B5_Input.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -4755,33 +4755,33 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2671 2671_555.pirrota_788_B5_Su_var_3-7.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2671:5.pirrota_788_B5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2671 2671_555.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2671:555.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2671 2671_repset.5014218.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2671:repset.5014218.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_502.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672:502.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2672:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_repset.5013682.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672:repset.5013682.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_repset.5013682.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2672:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_503.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672:503.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_502.pirrota_735_A11_Su_var_3-7.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2672:2.pirrota_735_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2672 2672_503.pirrota_736_A15_Su_var_3-7.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2672:3.pirrota_736_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_373.pirrota_584_A14_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2673:373.pirrota_584_A14_Input_20cycles_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_334.pirrota_536_A12_Su_var_3-9.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2673:34.pirrota_536_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_328.pirrota_506_A12_Input_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2673:328.pirrota_506_A12_Input_20cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_381.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:381.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_334.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:334.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_335.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:335.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_335.pirrota_537_S12_Su_var_3-9.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2673:35.pirrota_537_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_86.pirrota_243_S12_Input_20_cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2673:86.pirrota_243_S12_Input_20_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_repset.4620686.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_381.pirrota_592_A14_Su_var_3-9.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2673:81.pirrota_592_A14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2673 2673_repset.4620686.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:repset.4620686.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_378.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674:378.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_repset.4621690.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674:repset.4621690.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_repset.4621690.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_378.pirrota_572_S14mod2.2-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2674:378.pirrota_572_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_644.pirrota_873_S15_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2674:644.pirrota_873_S15_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_676.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674:676.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_676.pirrota_921_S15_mod2.2-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2674:676.pirrota_921_S15_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2674 2674_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2674:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_502.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672:502.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_452.pirrota_683_A11_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2672:2.pirrota_683_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_repset.5013682.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672:repset.5013682.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_repset.5013682.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_453.pirrota_684_A15_Input.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2672:3.pirrota_684_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_503.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2672:503.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_502.pirrota_735_A11_Su_var_3-7.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2672:2.pirrota_735_A11.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2672 2672_503.pirrota_736_A15_Su_var_3-7.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2672:3.pirrota_736_A15.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_373.pirrota_584_A14_Input_20cycles_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2673:373.pirrota_584_A14_Input_20cycles_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_334.pirrota_536_A12_Su_var_3-9.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2673:34.pirrota_536_A12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_328.pirrota_506_A12_Input_20cyc_.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2673:328.pirrota_506_A12_Input_20cyc_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_381.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:381.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_334.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:334.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_335.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:335.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_335.pirrota_537_S12_Su_var_3-9.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2673:35.pirrota_537_S12.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_86.pirrota_243_S12_Input_20_cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2673:86.pirrota_243_S12_Input_20_cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_repset.4620686.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_381.pirrota_592_A14_Su_var_3-9.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2673:81.pirrota_592_A14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2673 2673_repset.4620686.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2673:repset.4620686.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_378.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674:378.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_repset.4621690.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674:repset.4621690.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_repset.4621690.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_378.pirrota_572_S14mod2.2-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2674:378.pirrota_572_S14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_644.pirrota_873_S15_Input-18cycles.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2674:644.pirrota_873_S15_Input-18cycles.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_676.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2674:676.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_676.pirrota_921_S15_mod2.2-VC.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2674:676.pirrota_921_S15_.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2674 2674_320.pirrota_499_S14_Input18.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2674:320.pirrota_499_S14_Input18.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2676 2676_BC1_plus.wig.gz D.melanogaster/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2676:pl.wig.gz coverage-graph_wiggle D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2676 2676_SRR034220.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2676.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2676 2676_BC1_minus.wig.gz D.melanogaster/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2676:min.wig.gz coverage-graph_wiggle D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -4818,9 +4818,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2687 2687_BC12_minus.wig.gz D.melanogaster/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-22-24-hrSC#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2687:min.wig.gz coverage-graph_wiggle D. melanogaster mRNA RNA-seq total-RNA Embryos 22-24 hr Developmental-Stage=Embryos 22-24 hrSC#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2687 2687_SRR034231.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-22-24-hrSC#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2687.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 22-24 hr Developmental-Stage=Embryos 22-24 hrSC#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2687 2687_BC12_plus.wig.gz D.melanogaster/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-22-24-hrSC#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2687:pl.wig.gz coverage-graph_wiggle D. melanogaster mRNA RNA-seq total-RNA Embryos 22-24 hr Developmental-Stage=Embryos 22-24 hrSC#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -2721 2721_libV028.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2721.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2721 2721_libV033.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2721.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling -2725 2725_GSM361908.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2725.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2721 2721_libV028.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2721.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2721 2721_libV033.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_2721.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +2725 2725_GSM361908.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2725.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2726 2726_OID25717_16702001_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2726.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2726 2726_OID27095_18146001_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2726.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2726 2726_OID27095_18146001_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2726.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement @@ -4839,10 +4839,10 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2729 2729_352675_LEM2_700_610_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair LEM-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2729:5_LEM2_700_61.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip LEM-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 2729 2729_372297_LEM2_655_565_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair LEM-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_2729.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip LEM-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites 2729 2729_SDQ3891_LEM2_N2_MXEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LEM-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2729:3891_LEM2_N2_MXEMB_1.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip LEM-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2730 2730_spe9day0_rep_s_6.S3_ws220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:rep_s_6.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -2730 2730_SRR032279.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:79.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -2730 2730_spe9day0_s_1.S3_ws220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:s_1.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -2730 2730_SRR032283.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:83.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2730 2730_spe9day0_rep_s_6.S3_ws220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:rep_s_6.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2730 2730_SRR032279.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:79.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2730 2730_spe9day0_s_1.S3_ws220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:s_1.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2730 2730_SRR032283.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2730:83.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2732 2732_spe9day5_s_2.S3_ws220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2732.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2732 2732_SRR032280.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2732.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2733 2733_spe9day8_s_3.S3_ws220.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2733:s_3.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -4871,15 +4871,15 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2746 2746_V064.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Ago2-414#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2746.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Ago2 414#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2749 2749_V066.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=r2d2-1#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2749.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=r2d2 1#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2751 2751_V090.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Male#Strain=Canton-S#Tissue=Male-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2751.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Male Developmental-Stage=Adult Male#Strain=Canton S#Tissue=Male body Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2753 2753_S2_6.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:S2_6.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_S2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:S2.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_1_S2_6.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:1_S2_6.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_S2_6.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2753.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_S2_2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:S2_2.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_SRR037519.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2753.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_SRR037521.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2753.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_S2.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2753:.wig.gz.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2753 2753_S2_2.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2753:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_S2_6.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:S2_6.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_S2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:S2.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_1_S2_6.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:1_S2_6.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_S2_6.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2753.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_S2_2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2753:S2_2.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_SRR037519.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2753.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_SRR037521.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2753.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_S2.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2753:.wig.gz.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2753 2753_S2_2.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2753:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 2754 2754_SRR037524.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2754.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 2754 2754_BG3_13.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2754:13.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 2754 2754_BG3_7.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2754:7.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication @@ -4888,50 +4888,50 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2754 2754_SRR037522.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2754.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 2754 2754_BG3.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2754:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 2754 2754_BG3_7.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2754:7.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_KC.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2755:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_KC_1.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2755:1.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_SRR037528.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2755.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_KC_1.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2755:1.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_KC.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2755:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_SRR037529.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2755.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_KC_12.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2755:12.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2755 2755_KC_12.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2755.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -2756 2756_NimbHX_V_56A6Ao_353400-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2756 2756_NimbHX_Q_57A6Ao_382419-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2756 2756_Q_57A6Ao_382419-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2756.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2756 2756_NimbHX_V_56A6Ao_353400-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2756 2756_V_56A6Ao_353400-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2756.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2756 2756_NimbHX_Q_57A6Ao_382419-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2757 2757_NimbHX_W_56A6Ap_353374-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2757 2757_I_57A6Ap_382410-2_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2757.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2757 2757_NimbHX_W_56A6Ap_353374-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2757 2757_W_56A6Ap_353374-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2757.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2757 2757_NimbHX_I_57A6Ap_382410-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2757 2757_NimbHX_I_57A6Ap_382410-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2758 2758_NimbHX_O_57A0A1_353281-4_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling -2758 2758_O_57A0A1_353281-4_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2758.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling -2758 2758_NimbHX_O_57A0A1_353281-4_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Cy5-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Henikoff, S. RNA expression profiling -2758 2758_NimbHX_X_56A0A1_353629-4_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2758 2758_NimbHX_X_56A0A1_353629-4_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling -2758 2758_X_56A0A1_353629-4_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2758.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2759 2759_AA_56C6Co_382517-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2759.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2759 2759_NimbHX_K_57C6Co_352810-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2759 2759_K_57C6Co_352810-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2759.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2759 2759_NimbHX_AA_56C6Co_382517-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2759 2759_NimbHX_K_57C6Co_352810-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2759 2759_NimbHX_AA_56C6Co_382517-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2760 2760_NimbHX_AB_56C6Cp_382773-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2760 2760_L_57C6Cp_353279-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2760.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2760 2760_NimbHX_L_57C6Cp_353279-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2760 2760_AB_56C6Cp_382773-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2760.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2760 2760_NimbHX_L_57C6Cp_353279-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure -2760 2760_NimbHX_AB_56C6Cp_382773-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure -2761 2761_NimbHX_P_57C0C1_383370-2_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2761 2761_NimbHX_AC_56C0C1_353355-5_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling -2761 2761_NimbHX_P_57C0C1_383370-2_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2761 2761_P_57C0C1_383370-2_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2761.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2761 2761_NimbHX_AC_56C0C1_353355-5_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-3:Cy3-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-3 Dmel_r5.32 Henikoff, S. RNA expression profiling -2761 2761_AC_56C0C1_353355-5_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2761.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2755 2755_KC.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2755:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_KC_1.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2755:1.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_SRR037528.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2755.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_KC_1.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2755:1.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_KC.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2755:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_SRR037529.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2755.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_KC_12.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2755:12.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2755 2755_KC_12.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2755.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +2756 2756_NimbHX_V_56A6Ao_353400-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2756 2756_NimbHX_Q_57A6Ao_382419-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2756 2756_Q_57A6Ao_382419-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2756.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2756 2756_NimbHX_V_56A6Ao_353400-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2756 2756_V_56A6Ao_353400-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2756.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2756 2756_NimbHX_Q_57A6Ao_382419-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2756.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2757 2757_NimbHX_W_56A6Ap_353374-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2757 2757_I_57A6Ap_382410-2_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2757.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2757 2757_NimbHX_W_56A6Ap_353374-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2757 2757_W_56A6Ap_353374-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2757.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2757 2757_NimbHX_I_57A6Ap_382410-2_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2757 2757_NimbHX_I_57A6Ap_382410-2_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2757.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2758 2758_NimbHX_O_57A0A1_353281-4_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2758 2758_O_57A0A1_353281-4_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2758.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2758 2758_NimbHX_O_57A0A1_353281-4_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Cy5-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Henikoff, S. RNA expression profiling +2758 2758_NimbHX_X_56A0A1_353629-4_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2758 2758_NimbHX_X_56A0A1_353629-4_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2758.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2758 2758_X_56A0A1_353629-4_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2758.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2759 2759_AA_56C6Co_382517-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2759.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2759 2759_NimbHX_K_57C6Co_352810-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2759 2759_K_57C6Co_352810-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2759.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2759 2759_NimbHX_AA_56C6Co_382517-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2759 2759_NimbHX_K_57C6Co_352810-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2759 2759_NimbHX_AA_56C6Co_382517-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=soluble-fraction#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2759.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=soluble fraction#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2760 2760_NimbHX_AB_56C6Cp_382773-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2760 2760_L_57C6Cp_353279-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2760.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2760 2760_NimbHX_L_57C6Cp_353279-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2760 2760_AB_56C6Cp_382773-3_cy5_cy3.wig.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/normalized-arrayfile_wiggle Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2760.wig.gz normalized-arrayfile_wiggle D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2760 2760_NimbHX_L_57C6Cp_353279-3_635.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-1 Dmel_r5.32 Henikoff, S. Chromatin structure +2760 2760_NimbHX_AB_56C6Cp_382773-3_532.pair.gz D.melanogaster/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair Nucleosome:Cell-Line=Kc167#Compound=600-mM-salt#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#extract=precipitate#sampling-time-point=1-to-2-hours:DNA-tiling-array:Rep-2:Cy3-dye:Dmel_r5.32:modENCODE_2760.pair.gz raw-arrayfile_pair D. melanogaster Chromatin Structure DNA-tiling-array Nucleosome Late Embryos Cell-Line=Kc167#Compound=600 mM salt#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#extract=precipitate#sampling-time-point=1 to 2 hours Rep-2 Dmel_r5.32 Henikoff, S. Chromatin structure +2761 2761_NimbHX_P_57C0C1_383370-2_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2761 2761_NimbHX_AC_56C0C1_353355-5_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2761 2761_NimbHX_P_57C0C1_383370-2_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2761 2761_P_57C0C1_383370-2_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2761.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2761 2761_NimbHX_AC_56C0C1_353355-5_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-3:Cy3-dye:Dmel_r5.32:modENCODE_2761.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-3 Dmel_r5.32 Henikoff, S. RNA expression profiling +2761 2761_AC_56C0C1_353355-5_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#synthetic-RNA=CG5499-RNAi:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2761.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#synthetic-RNA=CG5499-RNAi Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling 2762 2762_SOH11C3_26_vs_SOH11C5_25_247384_cy3_cy5_WS220.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Developmental-Stage=Young-Adult#Strain=N2:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_2762.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array PolyA-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2 Rep-1 Cele_WS220 Henikoff, S. RNA expression profiling 2762 2762_NimbHX_SOH11C3_26_vs_SOH11C5_25_247384_635.pair.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Developmental-Stage=Young-Adult#Strain=N2:RNA-tiling-array:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2762.pair.gz raw-arrayfile_pair C. elegans mRNA RNA-tiling-array PolyA-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2 Rep-1 Cele_WS220 Henikoff, S. RNA expression profiling 2762 2762_SOH10C3_24_vs_SOH10C5_23_247382-2_cy3_cy5_WS220.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Developmental-Stage=Young-Adult#Strain=N2:RNA-tiling-array:Rep-2::Cele_WS220:modENCODE_2762.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array PolyA-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2 Rep-2 Cele_WS220 Henikoff, S. RNA expression profiling @@ -4956,33 +4956,33 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2766 2766_OID27095_18147201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4acTetra:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2766.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4acTetra Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2766 2766_OID25717_16706901_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4acTetra:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2766.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4acTetra Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2766 2766_OID27095_18147201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4acTetra:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2766.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4acTetra Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -2767 2767_372301_CBP1_655_560_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_372301_CBP1_655_560_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_352683_CBP1_700_580_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2767:83_CBP1_70.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_352676_CBP1_680_580_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2767:76_CBP1_68.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_372210_CBP1_660_555_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_SDQ3582_CBP1_N2_MXEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2767:82_CBP1_N2_MXEMB_1.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_352676_CBP1_680_580_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2767:76_CBP1_68.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_SDQ3582_CBP1_N2_MXEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2767.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_SDQ3582_CBP1_N2_MXEMB_3.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_2767.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_SDQ3575_CBP1_N2_MXEMB_4.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2767:75_CBP1_N2_MXEMB_4.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_352683_CBP1_700_580_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2767:83_CBP1_70.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -2767 2767_372210_CBP1_660_555_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair cbp:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip cbp Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_372301_CBP1_655_560_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_372301_CBP1_655_560_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_352683_CBP1_700_580_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2767:83_CBP1_70.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_352676_CBP1_680_580_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2767:76_CBP1_68.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_372210_CBP1_660_555_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_SDQ3582_CBP1_N2_MXEMB_1.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2767:82_CBP1_N2_MXEMB_1.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_352676_CBP1_680_580_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2767:76_CBP1_68.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_SDQ3582_CBP1_N2_MXEMB_2.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2767.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_SDQ3582_CBP1_N2_MXEMB_3.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_2767.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_SDQ3575_CBP1_N2_MXEMB_4.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2767:75_CBP1_N2_MXEMB_4.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_352683_CBP1_700_580_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2767:83_CBP1_70.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +2767 2767_372210_CBP1_660_555_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair CtBP:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2767.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip CtBP Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 2768 2768_MP05858_H4-N2-L3-2_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2768.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2768 2768_MP05858_H4-N2-L3-1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2768.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2768 2768_MP05858_H4-N2-L3-2_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2768.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2768 2768_MP05858_H4-N2-L3-1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2768.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2768 2768_MP05858_H4DAM1636076_N2_L3_1.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2768.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2768 2768_MP05858_H4DAM1636076_N2_L3_2.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2768.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -2769 2769_NimbHX_35A1-35A0_237367_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2769:35A1-35A0_237367.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_NimbHX_1_41A0A1_271532-5_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-3:Cy3-dye:Dmel_r5.32:modENCODE_2769.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_NimbHX_29A1-29A0_237370_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2769.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_NimbHX_1_41A0A1_271532-5_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2769:1_41A0A1_271532-5.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_35A1-35A0_237367_cy3_cy5.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2769:35A1-35A0_237367_cy3_cy5.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_NimbHX_35A1-35A0_237367_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2769:35A1-35A0_237367.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_NimbHX_29A1-29A0_237370_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2769:29A1-29A0_237370.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_1_41A0A1_271532-5_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2769:1_41A0A1_271532-5_cy5_cy3.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling -2769 2769_29A1-29A0_237370_cy3_cy5.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2769.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_NimbHX_35A1-35A0_237367_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2769:35A1-35A0_237367.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_NimbHX_1_41A0A1_271532-5_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-3:Cy3-dye:Dmel_r5.32:modENCODE_2769.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_NimbHX_29A1-29A0_237370_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2:Cy5-dye:Dmel_r5.32:modENCODE_2769.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_NimbHX_1_41A0A1_271532-5_635.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy5-dye:Dmel_r5.32:modENCODE_2769:1_41A0A1_271532-5.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_35A1-35A0_237367_cy3_cy5.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2769:35A1-35A0_237367_cy3_cy5.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_NimbHX_35A1-35A0_237367_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2769:35A1-35A0_237367.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_NimbHX_29A1-29A0_237370_532.pair.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_pair PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1:Cy3-dye:Dmel_r5.32:modENCODE_2769:29A1-29A0_237370.pair.gz raw-arrayfile_pair D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_1_41A0A1_271532-5_cy5_cy3.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2769:1_41A0A1_271532-5_cy5_cy3.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Henikoff, S. RNA expression profiling +2769 2769_29A1-29A0_237370_cy3_cy5.wig.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle PolyA-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-tiling-array:Rep-2::Dmel_r5.32:modENCODE_2769.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array PolyA-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Henikoff, S. RNA expression profiling 2770 2770_AB9045_H3K9ME1291918_N2_L3_1.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2770.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K9me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2770 2770_AB9045_H3K9ME1291918_N2_L3_2.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2770.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K9me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2770 2770_AB9045_H3K9me1_N2_L3_1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K9me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2770.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K9me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -5024,50 +5024,50 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2781 2781_young-adult_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_2781.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure 2782 2782_male-yAd_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):RNA-seq:Rep-1::Cele_WS220:modENCODE_2782.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure 2782 2782_SRR014972.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):RNA-seq:Rep-1::Cele_WS220:modENCODE_2782.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure -2783 2783_KC_MCM_27.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2783.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -2783 2783_KC_MCM_27.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2783:27.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2783 2783_KC_MCM_26.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2783:26.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2783 2783_KC_MCM_26.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2783:26.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2783 2783_KC_MCM.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2783:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2783 2783_SRR037526.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2783.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication -2783 2783_KC_MCM.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2783:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_KC_MCM_27.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2783.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_KC_MCM_27.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2783:27.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_KC_MCM_26.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2783:26.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_KC_MCM_26.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2783:26.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_KC_MCM.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2783:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_SRR037526.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2783.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Replication +2783 2783_KC_MCM.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2783:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 2784 2784_AB9051_H4K20ME1104513_N2_L3_2.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_2784.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2784 2784_AB9051_H4K20me1_N2_L3_2_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_2784.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2784 2784_AB9051_H4K20ME1104513_N2_L3_1.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_2784.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2784 2784_AB9051_H4K20me1_N2_L3_1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_2784.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2784 2784_AB9051_H4K20me1_N2_L3_2_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_2784.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 2784 2784_AB9051_H4K20me1_N2_L3_1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2784.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -2785 2785_Day0-spe-9_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2785.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -2785 2785_SRR032283.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2785:83.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -2785 2785_SRR032279.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2785:79.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0post-L4 molt stage larvae Developmental-Stage=Young adult DAY0post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2785 2785_Day0-spe-9_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2785.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2785 2785_SRR032283.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2785:83.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +2785 2785_SRR032279.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2785:79.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2786 2786_SRR032280.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2786.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2786 2786_Day5-spe-9_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2786.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2787 2787_Day8-spe-9_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2787.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2787 2787_SRR032284.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2787.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 2788 2788_Day12-spe-9_miRNA_0210.gff3.gz C.elegans/small-RNA/RNA-seq/gene-model_gff3 small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2788.gff3.gz gene-model_gff3 C. elegans small RNA RNA-seq small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -2820 2820_V009.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2820.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2820 2820_V009.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2820.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2821 2821_miRNA_eri-1_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-Adult#Strain=GR1373#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2821.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult Developmental-Stage=Young Adult#Strain=GR1373#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2822 2822_miRNA-glp-4_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-Adult#Strain=SS104#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2822.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult Developmental-Stage=Young Adult#Strain=SS104#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling -2823 2823_miRNA_spermatids_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=him-8(e1489)#Tissue=spermatids#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2823.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=him-8(e1489)#Tissue=spermatids#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +2823 2823_miRNA_spermatids_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=him-8(e1489)#Tissue=Spermatids#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2823.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=him-8(e1489)#Tissue=Spermatids#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2825 2825_miRNA_mixed_stage_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2825.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2826 2826_miRNA_embryos_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2826.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2827 2827_miRNA_eri-1.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-Adult#Strain=GR1373#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2827.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult Developmental-Stage=Young Adult#Strain=GR1373#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2828 2828_miRNA-glp-4.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-Adult#Strain=SS104#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2828.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult Developmental-Stage=Young Adult#Strain=SS104#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling -2829 2829_miRNA_spermatids.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=him-8(e1489)#Tissue=spermatids#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2829.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=him-8(e1489)#Tissue=spermatids#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling -2830 2830_miRNA_oocytes_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=BA1#Tissue=unfertilized-oocytes#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2830.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=BA1#Tissue=unfertilized oocytes#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +2829 2829_miRNA_spermatids.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=him-8(e1489)#Tissue=Spermatids#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2829.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=him-8(e1489)#Tissue=Spermatids#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +2830 2830_miRNA_oocytes_solexa.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=BA1#Tissue=Unfertilized-oocytes#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2830.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=BA1#Tissue=Unfertilized oocytes#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2831 2831_miRNA_young_adult.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2831.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling -2832 2832_miRNA_oocytes.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=BA1#Tissue=unfertilized-oocytes#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2832.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=BA1#Tissue=unfertilized oocytes#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +2832 2832_miRNA_oocytes.ws220.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Males-70-hr-post-L1-stage-larvae#Strain=BA1#Tissue=Unfertilized-oocytes#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_2832.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult Males 70 hr post-L1 stage larvae Developmental-Stage=Adult Males 70 hr post-L1 stage larvae#Strain=BA1#Tissue=Unfertilized oocytes#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 2833 2833_V065.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Dcr-2L811fsX#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2833.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dcr-2L811fsX#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2896 2896_Dro2_AS_DroAdF-Ecl+30day_880.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2896.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2896 2896_Dro2_AS_DroAdF-Ecl+30day_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_2896.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -2896 2896_Dro2_AS_DroAdF-Ecl+30day_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2896.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2896 2896_Dro2_AS_DroAdF-Ecl+30day_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2896.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -2896 2896_Dro2_AS_DroAdF-Ecl+30day_880.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2896.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2897 2897_Dro2_AS_DroAdM-Ecl+30day_803.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2897.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2897 2897_Dro2_AS_DroAdM-Ecl+30day_803.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2897.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -2897 2897_Dro2_AS_DroAdM-Ecl+30day_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2897.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling -2897 2897_Dro2_AS_DroAdM-Ecl+30day_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_2897.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling -2897 2897_Dro2_AS_DroAdM-Ecl+30day_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2897.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2896 2896_Dro2_AS_DroAdF-Ecl+30day_880.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2896.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2896 2896_Dro2_AS_DroAdF-Ecl+30day_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_2896.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +2896 2896_Dro2_AS_DroAdF-Ecl+30day_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2896.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2896 2896_Dro2_AS_DroAdF-Ecl+30day_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2896.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +2896 2896_Dro2_AS_DroAdF-Ecl+30day_880.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2896.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2897 2897_Dro2_AS_DroAdM-Ecl+30day_803.gr.gz D.melanogaster/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2897.wig.gz normalized-arrayfile_wiggle D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2897 2897_Dro2_AS_DroAdM-Ecl+30day_803.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_2897.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling +2897 2897_Dro2_AS_DroAdM-Ecl+30day_RW_C01_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_2897.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling +2897 2897_Dro2_AS_DroAdM-Ecl+30day_RW_C01_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_2897.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling +2897 2897_Dro2_AS_DroAdM-Ecl+30day_RW_C01_B1_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1:Biotin:Dmel_r5.32:modENCODE_2897.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling 2928 2928_SRR034309.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mixed-Embryos-0-24-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2928.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 2961 2961_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs.genelets.ws220.gff3.gz C.elegans/mRNA/integrated-gene-model/gene-model_gff3 transfrag:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_2961.gff3.gz gene-model_gff3 C. elegans mRNA integrated-gene-model transfrag Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure 2961 2961_SRR031115.fastq.gz C.elegans/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_2961:5.fastq.gz raw-seqfile_fastq C. elegans mRNA integrated-gene-model transfrag Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -5096,49 +5096,49 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2970 2970_SDQ4129_Y39G10AR18_N2_MXEMB_1_A_396362_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair Y39G10AR.18:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_2970.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip Y39G10AR.18 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 2971 2971_V001.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Embryos-2-18-hr#Strain=w1118:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2971.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Embryos 2-18 hr Developmental-Stage=Embryos 2-18 hr#Strain=w1118 Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2972 2972_V002.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Embryos-2-18-hr#Strain=w1118:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2972.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Embryos 2-18 hr Developmental-Stage=Embryos 2-18 hr#Strain=w1118 Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2973 2973_S31.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2973:1.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2973 2973_S32.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2973:2.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2974 2974_S34.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2974:4.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2974 2974_S35.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2974:5.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2973 2973_S31.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2973:1.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2973 2973_S32.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2973:2.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2974 2974_S34.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2974:4.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +2974 2974_S35.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Kc-Rubin#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2974:5.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Kc-Rubin#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2975 2975_V098.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Dcr-2L811fsX#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2975.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dcr-2L811fsX#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 2976 2976_V097.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_2976.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -2979 2979_S2_MCM.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2979:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_S2_MCM.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_DM23_S2MCMIN.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2979.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_S2_MCM_22.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979:22.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_S2_MCM_44.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2979:44.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_S2_MCM_22.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2979:22.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_DM24_PS22_S2MCMIP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_S2_MCM_44.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979:44.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -2979 2979_DM34_PS44_S2MCMIP2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2979.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication -2980 2980_SRR034784.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:84.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R33s_5_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:33s_5_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034789.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:89.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034787.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:87.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034782.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:82.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R16s_8_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_8_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R33s_6_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:33s_6_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R7s_3_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:7s_3_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R23s_8_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:23s_8_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034788.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:88.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R16s_7_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_7_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034786.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:86.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R16s_6_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_6_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034783.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:83.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R16s_5_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_5_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R16s_3_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_3_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034790.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:90.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034791.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:91.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_SRR034785.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:85.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2980 2980_Dpse_R16s_4_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_4_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Developmental-Stage=Dpse Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -2984 2984_repset.9275711.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984:repset.9275711.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_781.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984:781.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_782.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984:782.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_pirrota_1014_S15_Ash1-Q4177.781.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2984:4_S15_Ash1-Q4177.781.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_pirrota_915_A17_Input-18cycles.670.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2984:915_A17_Input-18cycles.670.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2984:873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_repset.9275711.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2984 2984_pirrota_1015_A17_Ash1-Q4177.782.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2984:5_A17_Ash1-Q4177.782.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2979 2979_S2_MCM.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2979:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_S2_MCM.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_DM23_S2MCMIN.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_2979.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_S2_MCM_22.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979:22.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_S2_MCM_44.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2979:44.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_S2_MCM_22.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_2979:22.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_DM24_PS22_S2MCMIP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_S2_MCM_44.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_2979:44.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +2979 2979_DM34_PS44_S2MCMIP2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq MCM2-7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_2979.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq MCM2-7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication +2980 2980_SRR034784.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:84.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R33s_5_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:33s_5_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034789.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:89.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034787.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:87.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034782.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:82.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R16s_8_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_8_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R33s_6_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:33s_6_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R7s_3_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:7s_3_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R23s_8_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:23s_8_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034788.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:88.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R16s_7_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_7_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034786.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:86.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R16s_6_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_6_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034783.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:83.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R16s_5_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_5_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R16s_3_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_3_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034790.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:90.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034791.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:91.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_SRR034785.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:85.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2980 2980_Dpse_R16s_4_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Female-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_2980:16s_4_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=D.pseudoobscura wild-type#Tissue=Dpse Female heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +2984 2984_repset.9275711.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984:repset.9275711.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_781.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984:781.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_782.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984:782.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_pirrota_1014_S15_Ash1-Q4177.781.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2984:4_S15_Ash1-Q4177.781.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_pirrota_915_A17_Input-18cycles.670.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2984:915_A17_Input-18cycles.670.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2984:873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_repset.9275711.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2984.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2984 2984_pirrota_1015_A17_Ash1-Q4177.782.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2984:5_A17_Ash1-Q4177.782.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2986 2986_821.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2986:821.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2986 2986_repset.9276441.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dSFMBT:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2986.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2986 2986_pirrota_894_B4_SFMBT.665.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2986:894_B4_SFMBT.665.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5147,45 +5147,45 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2986 2986_pirrota_1064_B9_Input-18cycles.822.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2986:1064_B9_Input-18cycles.822.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2986 2986_pirrota_1063_B9_SFMBT-Q2642.821.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2986:1063_B9_SFMBT-Q2642.821.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 2986 2986_pirrota_916_B4_Input-18cycles.671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2986:916_B4_Input-18cycles.671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_784.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987:784.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_pirrota_1062_B10_EZ-Q3421.820.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2987:62_B10_EZ-Q3421.820.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_820.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987:820.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_pirrota_1065_B10_Input-18cycles.823.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2987:1065_B10_Input-18cycles.823.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_repset.9276440.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987:repset.9276440.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_pirrota_916_B4_Input-18cycles.671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2987:916_B4_Input-18cycles.671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_pirrota_1017_B4_EZ-Q3421.784.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2987:17_B4_EZ-Q3421.784.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2987 2987_repset.9276440.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 E(Z):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_pirrota_917_S15_EZ-Q3421.672.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2988:917_S15_EZ-Q3421.672.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_repset.9275710.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_783.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988:783.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2988.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_repset.9275710.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988:repset.9275710.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_672.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988:672.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2988 2988_pirrota_1016_S15_EZ-Q3421.783.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2988:1016_S15_EZ-Q3421.783.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -2989 2989_1131.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989:1131.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_pirrota_1404_Elate12_Input.1156.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2989:4_Elate12_Input.1156.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_1149.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989:1149.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_pirrota_1397_Elate14_H2AV-9751.1149.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2989:7_Elate14_H2AV-9751.1149.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_pirrota_1393_Elate12_H2AV-9751.1131.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2989:3_Elate12_H2AV-9751.1131.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_pirrota_1403_Elate14_Input.1155.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2989:3_Elate14_Input.1155.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_repset.9701254.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2989 2989_repset.9701254.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989:repset.9701254.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_pirrota_1394_Elate4_H2AV-9751.1145.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2990:4_Elate4_H2AV-9751.1145.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_pirrota_1267_Eearly4_Input.910.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2990:7_Eearly4_Input.910.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_1148.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990:1148.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_pirrota_1396_Eearly5_H2AV-9751.1148.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2990:6_Eearly5_H2AV-9751.1148.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_repset.9701248.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990:repset.9701248.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_repset.9701248.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_1145.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990:1145.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2990 2990_pirrota_1266_Eearly5_Input.909.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2990:6_Eearly5_Input.909.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_repset.9699867.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_pirrota_939_H2Av-9751.693.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2991:939_H2Av-9751.693.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_pirrota_802_A12.input.565.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2991:2_A12.input.565.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_repset.9699867.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991:repset.9699867.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_693.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991:693.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_pirrota_1217_A14_H2AV_9751.887.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2991:1217_A14_H2AV_9751.887.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_887.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991:887.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2991 2991_pirrota_803_A14.input.566.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2991:3_A14.input.566.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2987 2987_784.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987:784.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_pirrota_1062_B10_EZ-Q3421.820.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2987:62_B10_EZ-Q3421.820.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_820.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987:820.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_pirrota_1065_B10_Input-18cycles.823.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2987:1065_B10_Input-18cycles.823.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_repset.9276440.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987:repset.9276440.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_pirrota_916_B4_Input-18cycles.671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2987:916_B4_Input-18cycles.671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_pirrota_1017_B4_EZ-Q3421.784.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2987:17_B4_EZ-Q3421.784.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2987 2987_repset.9276440.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Enhancer-of-zeste:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2987.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_pirrota_917_S15_EZ-Q3421.672.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2988:917_S15_EZ-Q3421.672.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_repset.9275710.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_783.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988:783.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2988.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_repset.9275710.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988:repset.9275710.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_672.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2988:672.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2988 2988_pirrota_1016_S15_EZ-Q3421.783.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2988:1016_S15_EZ-Q3421.783.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +2989 2989_1131.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989:1131.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_pirrota_1404_Elate12_Input.1156.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2989:4_Elate12_Input.1156.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_1149.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989:1149.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_pirrota_1397_Elate14_H2AV-9751.1149.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2989:7_Elate14_H2AV-9751.1149.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_pirrota_1393_Elate12_H2AV-9751.1131.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2989:3_Elate12_H2AV-9751.1131.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_pirrota_1403_Elate14_Input.1155.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2989:3_Elate14_Input.1155.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_repset.9701254.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2989 2989_repset.9701254.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2989:repset.9701254.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_pirrota_1394_Elate4_H2AV-9751.1145.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2990:4_Elate4_H2AV-9751.1145.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_pirrota_1267_Eearly4_Input.910.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2990:7_Eearly4_Input.910.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_1148.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990:1148.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_pirrota_1396_Eearly5_H2AV-9751.1148.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2990:6_Eearly5_H2AV-9751.1148.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_repset.9701248.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990:repset.9701248.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_repset.9701248.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_1145.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2990:1145.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2990 2990_pirrota_1266_Eearly5_Input.909.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2990:6_Eearly5_Input.909.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_repset.9699867.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_pirrota_939_H2Av-9751.693.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2991:939_H2Av-9751.693.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_pirrota_802_A12.input.565.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2991:2_A12.input.565.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_repset.9699867.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991:repset.9699867.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_693.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991:693.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_pirrota_1217_A14_H2AV_9751.887.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2991:1217_A14_H2AV_9751.887.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_887.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2991:887.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2991 2991_pirrota_803_A14.input.566.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2991:3_A14.input.566.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2992 2992_pirrota_1360_EL10_H2B-ubiq(NRO3).1112.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2992:60_EL10_H2B-ubiq(NRO3).1112.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2992 2992_1111.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2992:1111.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2992 2992_1112.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2992:1112.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5201,14 +5201,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2993 2993_pirrota_1207_E7_Input.938.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2993:7_E7_Input.938.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2993 2993_pirrota_1192_E7_H2Bubiq.923.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2993:2_E7_H2Bubiq.923.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2993 2993_repset.9700972.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2993:repset.9700972.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_pirrota_1189_CI8-1_H2Bubiq.920.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2994:89_CI8-1_H2Bubiq.920.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2994:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_921.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994:921.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_repset.9699856.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2994:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_repset.9699856.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994:repset.9699856.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_920.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994:920.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2994 2994_pirrota_1190_CI8-2_H2Bubiq.921.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2994:90_CI8-2_H2Bubiq.921.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_pirrota_1189_CI8-1_H2Bubiq.920.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2994:89_CI8-1_H2Bubiq.920.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2994:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_921.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994:921.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_repset.9699856.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2994:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_repset.9699856.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994:repset.9699856.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_920.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2994:920.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2994 2994_pirrota_1190_CI8-2_H2Bubiq.921.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2994:90_CI8-2_H2Bubiq.921.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2995 2995_865.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2995:865.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2995 2995_pirrota_1104_L3_3_H3K18ac.864.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2995:4_L3_3_H3K18ac.864.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2995 2995_repset.9699505.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2995.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5217,14 +5217,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2995 2995_pirrota_1105_L3_6_H3K18ac.865.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2995:5_L3_6_H3K18ac.865.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2995 2995_864.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2995:864.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2995 2995_repset.9699505.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2995:repset.9699505.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_862.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996:862.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_repset.9276742.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_863.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996:863.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2996:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_pirrota_1102_Kc4_H3K18ac.862.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2996:2_Kc4_H3K18ac.862.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_pirrota_1103_Kc5_H3K18ac.863.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2996:3_Kc5_H3K18ac.863.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2996:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2996 2996_repset.9276742.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996:repset.9276742.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_862.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996:862.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_repset.9276742.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_863.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996:863.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2996:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_pirrota_1102_Kc4_H3K18ac.862.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2996:2_Kc4_H3K18ac.862.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_pirrota_1103_Kc5_H3K18ac.863.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2996:3_Kc5_H3K18ac.863.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2996:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2996 2996_repset.9276742.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2996:repset.9276742.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2997 2997_repset.9700957.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2997:repset.9700957.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2997 2997_1088.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2997:1088.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2997 2997_pirrota_1335_Elate7_H3K23ac.1087.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2997:5_Elate7_H3K23ac.1087.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5233,14 +5233,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2997 2997_repset.9700957.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2997.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. 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Histone modification and replacement -2998 2998_repset.9276737.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2998.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2998 2998_1055.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2998:1055.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2998 2998_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2998:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2998 2998_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2998:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -2998 2998_pirrota_1303_Kc4_H3K23ac.1055.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2998:303_Kc4_H3K23ac.1055.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2998 2998_repset.9276737.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2998:repset.9276737.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. 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Histone modification and replacement +2998 2998_pirrota_1093_Kc5_H3K23ac.853.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2998:093_Kc5_H3K23ac.853.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. 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Histone modification and replacement +2998 2998_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2998:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2998 2998_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2998:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +2998 2998_pirrota_1303_Kc4_H3K23ac.1055.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2998:303_Kc4_H3K23ac.1055.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2999 2999_668.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2999:668.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2999 2999_437.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2999:437.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2999 2999_pirrota_916_B4_Input-18cycles.671.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_2999:916_B4_Input-18cycles.671.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5249,14 +5249,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 2999 2999_repset.9273389.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2999.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2999 2999_pirrota_897_B4_H3K27me2-TJ.668.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_2999:897_B4_H3K27me2-TJ.668.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 2999 2999_repset.9273389.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_2999:repset.9273389.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_repset.9273385.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_repset.9273385.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000:repset.9273385.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_666.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000:666.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_667.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000:667.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3000:873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_pirrota_915_A17_Input-18cycles.670.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3000:915_A17_Input-18cycles.670.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_pirrota_896_S15_H3K27me2-TJ.667.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3000:6_S15_H3K27me2-TJ.667.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3000 3000_pirrota_895_A17_H3K27me2-TJ.666.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3000:5_A17_H3K27me2-TJ.666.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_repset.9273385.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_repset.9273385.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000:repset.9273385.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_666.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000:666.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_667.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3000:667.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3000:873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_pirrota_915_A17_Input-18cycles.670.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3000:915_A17_Input-18cycles.670.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_pirrota_896_S15_H3K27me2-TJ.667.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3000:6_S15_H3K27me2-TJ.667.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3000 3000_pirrota_895_A17_H3K27me2-TJ.666.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3000:5_A17_H3K27me2-TJ.666.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3001 3001_repset.9700974.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3001:repset.9700974.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3001 3001_pirrota_1206_E6_Input.937.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3001:6_E6_Input.937.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3001 3001_930.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3001:930.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5265,30 +5265,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3001 3001_repset.9700974.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3001.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3001 3001_pirrota_1207_E7_Input.938.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3001:7_E7_Input.938.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3001 3001_pirrota_1199_E7_H3K36me1.930.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3001:9_E7_H3K36me1.930.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3002:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_repset.9699858.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_928.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002:928.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_repset.9699858.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002:repset.9699858.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_927.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002:927.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_pirrota_1197_CL8-2_H3K36me1.928.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3002:7_CL8-2_H3K36me1.928.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3002:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3002 3002_pirrota_1196_CL8-1_H3K36me1.927.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3002:6_CL8-1_H3K36me1.927.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_925.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003:925.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_repset.9699857.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003:repset.9699857.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_pirrota_479_Kc-1_Input(14cyc).290.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3003:79_Kc-1_Input(14cyc).290.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_repset.9699857.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_926.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003:926.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_pirrota_1194_Kc1_H3K36me1.925.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3003:4_Kc1_H3K36me1.925.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_pirrota_1195_Kc2_H3K36me1.926.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3003:5_Kc2_H3K36me1.926.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3003 3003_pirrota_480_Kc-2_Input(14cyc).291.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3003:80_Kc-2_Input(14cyc).291.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_932.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004:932.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3004:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_931.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004:931.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3004:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_repset.9699859.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004:repset.9699859.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_pirrota_1200_CL8-1_H3K36me3.931.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3004:0_CL8-1_H3K36me3.931.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_pirrota_1201_CL8-2_H3K36me3.932.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3004:1_CL8-2_H3K36me3.932.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3004 3004_repset.9699859.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3002:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_repset.9699858.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_928.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002:928.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_repset.9699858.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002:repset.9699858.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_927.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3002:927.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_pirrota_1197_CL8-2_H3K36me1.928.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3002:7_CL8-2_H3K36me1.928.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3002:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3002 3002_pirrota_1196_CL8-1_H3K36me1.927.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3002:6_CL8-1_H3K36me1.927.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_925.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003:925.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_repset.9699857.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003:repset.9699857.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_pirrota_479_Kc-1_Input(14cyc).290.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3003:79_Kc-1_Input(14cyc).290.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_repset.9699857.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_926.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3003:926.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_pirrota_1194_Kc1_H3K36me1.925.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3003:4_Kc1_H3K36me1.925.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_pirrota_1195_Kc2_H3K36me1.926.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3003:5_Kc2_H3K36me1.926.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3003 3003_pirrota_480_Kc-2_Input(14cyc).291.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3003:80_Kc-2_Input(14cyc).291.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_932.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004:932.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3004:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_931.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004:931.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3004:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_repset.9699859.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004:repset.9699859.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_pirrota_1200_CL8-1_H3K36me3.931.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3004:0_CL8-1_H3K36me3.931.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_pirrota_1201_CL8-2_H3K36me3.932.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3004:1_CL8-2_H3K36me3.932.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3004 3004_repset.9699859.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3004.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3005 3005_pirrota_388_B2_H3K79Me.221.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3005:88_B2_H3K79Me.221.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3005 3005_repset.4162042.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3005:repset.4162042.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3005 3005_pirrota_364_B1_Input.207.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3005:4_B1_Input.207.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5305,14 +5305,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3006 3006_repset.9699504.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3006.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3006 3006_repset.9699504.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3006:repset.9699504.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3006 3006_861.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3006:861.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_pirrota_1094_Kc4_H3K9ac.854.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3007:94_Kc4_H3K9ac.854.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_pirrota_1034_Kc5_H3K9ac.808.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3007:34_Kc5_H3K9ac.808.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3007:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_808.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007:808.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_repset.9276741.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007:repset.9276741.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_repset.9276741.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_854.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007:854.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3007 3007_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3007:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_pirrota_1094_Kc4_H3K9ac.854.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3007:94_Kc4_H3K9ac.854.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_pirrota_1034_Kc5_H3K9ac.808.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3007:34_Kc5_H3K9ac.808.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3007:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_808.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007:808.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_repset.9276741.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007:repset.9276741.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_repset.9276741.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_854.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3007:854.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3007 3007_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3007:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3008 3008_900.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3008:900.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3008 3008_pirrota_1133_L3_6H3K9acS10P.901.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3008:3_L3_6H3K9acS10P.901.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3008 3008_repset.9699502.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3008.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5321,30 +5321,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3008 3008_repset.9699502.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3008:repset.9699502.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3008 3008_901.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3008:901.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3008 3008_pirrota_1059_L3_6_Input.799.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3008:9_L3_6_Input.799.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_pirrota_1118_Kc4_H3K9acS10P.878.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3009:8_Kc4_H3K9acS10P.878.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_repset.9276756.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3009:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_879.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009:879.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_pirrota_1119_Kc5_H3K9acS10P.879.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3009:9_Kc5_H3K9acS10P.879.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_878.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009:878.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3009:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3009 3009_repset.9276756.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009:repset.9276756.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_pirrota_1036_Cl8-2_H3K9acS10P.810.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3010:6_Cl8-2_H3K9acS10P.810.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_repset.9276433.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_repset.9276433.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010:repset.9276433.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_pirrota_1035_Cl8-1_H3K9acS10P.809.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3010:5_Cl8-1_H3K9acS10P.809.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3010:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_810.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010:810.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3010:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3010 3010_809.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010:809.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_pirrota_684_A15_Input.453.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3011:684_A15_Input.453.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_repset.9274430.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_pirrota_860_A15_H3K9me2.631.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3011:860_A15_H3K9me2.631.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_repset.9274430.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011:repset.9274430.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_pirrota_963_A17_Input(20cyc).724.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3011:963_A17_Input(20cyc).724.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_631.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011:631.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_pirrota_965_A17_H3K9me2(cntrldblChIP).726.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3011:965_A17_H3K9me2(cntrldblChIP).726.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3011 3011_726.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011:726.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_pirrota_1118_Kc4_H3K9acS10P.878.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3009:8_Kc4_H3K9acS10P.878.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_repset.9276756.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3009:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_879.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009:879.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_pirrota_1119_Kc5_H3K9acS10P.879.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3009:9_Kc5_H3K9acS10P.879.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_878.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009:878.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3009:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3009 3009_repset.9276756.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3009:repset.9276756.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_pirrota_1036_Cl8-2_H3K9acS10P.810.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3010:6_Cl8-2_H3K9acS10P.810.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_repset.9276433.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_repset.9276433.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010:repset.9276433.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_pirrota_1035_Cl8-1_H3K9acS10P.809.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3010:5_Cl8-1_H3K9acS10P.809.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3010:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_810.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010:810.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3010:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3010 3010_809.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3010:809.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_pirrota_684_A15_Input.453.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3011:684_A15_Input.453.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_repset.9274430.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_pirrota_860_A15_H3K9me2.631.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3011:860_A15_H3K9me2.631.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_repset.9274430.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011:repset.9274430.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_pirrota_963_A17_Input(20cyc).724.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3011:963_A17_Input(20cyc).724.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_631.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011:631.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_pirrota_965_A17_H3K9me2(cntrldblChIP).726.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3011:965_A17_H3K9me2(cntrldblChIP).726.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3011 3011_726.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3011:726.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3012 3012_859.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3012:859.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3012 3012_repset.9276738.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3012:repset.9276738.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3012 3012_repset.9276738.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3012.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5353,22 +5353,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3012 3012_pirrota_1060_E_early3_Input(20cyc).800.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3012:1060_E_early3_Input(20cyc).80.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3012 3012_pirrota_1099_Eearly3_H3K9me3.859.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3012:9_Eearly3_H3K9me3.859.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3012 3012_pirrota_1098_Eearly2_H3K9me3.858.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Developmental-Stage=Embryos-2-4-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3012:8_Eearly2_H3K9me3.858.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_repset.9276739.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013:repset.9276739.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3013:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_pirrota_1097_Kc5_H3K9me3.857.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3013:7_Kc5_H3K9me3.857.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3013:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_857.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013:857.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_856.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013:856.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_pirrota_1096_Kc4_H3K9me3.856.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3013:6_Kc4_H3K9me3.856.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3013 3013_repset.9276739.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_157.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014:157.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_pirrota_325_S11_H4K20me.157.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3014:325_S11_H4K20me.157.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_75.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014:75.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_repset.3211356.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014:repset.3211356.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_pirrota_254_S12_H4K20me1.75.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3014:254_S12_H4K20me1.75.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_pirrota_273_S12_Input.112.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3014:3_S12_Input.112.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_repset.3211356.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3014 3014_pirrota_272_S11_Input.111.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3014:2_S11_Input.111.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_repset.9276739.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013:repset.9276739.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3013:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_pirrota_1097_Kc5_H3K9me3.857.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3013:7_Kc5_H3K9me3.857.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3013:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_857.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013:857.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_856.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013:856.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_pirrota_1096_Kc4_H3K9me3.856.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3013:6_Kc4_H3K9me3.856.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3013 3013_repset.9276739.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3013.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_157.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014:157.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_pirrota_325_S11_H4K20me.157.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3014:325_S11_H4K20me.157.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_75.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014:75.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_repset.3211356.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014:repset.3211356.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_pirrota_254_S12_H4K20me1.75.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3014:254_S12_H4K20me1.75.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_pirrota_273_S12_Input.112.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3014:3_S12_Input.112.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_repset.3211356.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3014.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3014 3014_pirrota_272_S11_Input.111.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3014:2_S11_Input.111.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3015 3015_pirrota_1342_Elate8_HP1b.1094.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3015:2_Elate8_HP1b.1094.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3015 3015_repset.9700960.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3015:repset.9700960.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3015 3015_pirrota_1152_Elate7_Input(20cyc).974.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3015:2_Elate7_Input(20cyc).974.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5389,14 +5389,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3016 3016_repset.7766275.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3016.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3016 3016_repset.7766275.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3016:repset.7766275.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3016 3016_pirrota_820_B5_Hp1b.591.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3016:820_B5_Hp1b.591.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3017:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_pirrota_1111_CI8-2_HP1b.871.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3017:1_CI8-2_HP1b.871.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_870.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017:870.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_repset.9276759.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017:repset.9276759.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3017:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_871.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017:871.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_pirrota_1110_CI8-1_HP1b.870.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3017:0_CI8-1_HP1b.870.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3017 3017_repset.9276759.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3017:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_pirrota_1111_CI8-2_HP1b.871.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3017:1_CI8-2_HP1b.871.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_870.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017:870.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_repset.9276759.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017:repset.9276759.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3017:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_871.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017:871.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_pirrota_1110_CI8-1_HP1b.870.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3017:0_CI8-1_HP1b.870.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3017 3017_repset.9276759.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3017.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3018 3018_874.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3018:874.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1b Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3018 3018_pirrota_1115_L3_6_HP1b.875.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3018:5_L3_6_HP1b.875.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1b Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3018 3018_pirrota_1059_L3_6_Input.799.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3018:9_L3_6_Input.799.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1b Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5405,22 +5405,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3018 3018_repset.9276758.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 HP1b:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3018.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip HP1b Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3018 3018_pirrota_1114_L3_3_HP1b.874.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3018:4_L3_3_HP1b.874.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP1b Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3018 3018_repset.9276758.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3018:repset.9276758.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP1b Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3019 3019_pirrota_1112_Kc4_HP1b.872.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3019:2_Kc4_HP1b.872.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_pirrota_1113_Kc5_HP1b.873.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3019:3_Kc5_HP1b.873.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_873.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019:873.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3019:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_repset.9276754.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3019:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_872.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019:872.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3019 3019_repset.9276754.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019:repset.9276754.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_992.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020:992.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3020:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_991.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020:991.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_repset.9699868.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_repset.9699868.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020:repset.9699868.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_pirrota_1233_A20_Hp1b.991.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3020:3_A20_Hp1b.991.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_pirrota_1234_A21_Hp1b.992.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3020:4_A21_Hp1b.992.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3020 3020_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3020:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_pirrota_1112_Kc4_HP1b.872.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3019:2_Kc4_HP1b.872.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_pirrota_1113_Kc5_HP1b.873.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3019:3_Kc5_HP1b.873.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_873.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019:873.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3019:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_repset.9276754.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3019:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_872.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019:872.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3019 3019_repset.9276754.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3019:repset.9276754.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_992.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020:992.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3020:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_991.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020:991.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_repset.9699868.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_repset.9699868.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3020:repset.9699868.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_pirrota_1233_A20_Hp1b.991.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3020:3_A20_Hp1b.991.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_pirrota_1234_A21_Hp1b.992.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3020:4_A21_Hp1b.992.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3020 3020_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3020:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3021 3021_pirrota_1152_Elate7_Input(20cyc).974.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3021:2_Elate7_Input(20cyc).974.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3021 3021_repset.9701249.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3021:repset.9701249.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3021 3021_pirrota_1331_Elate7_HP1c.1083.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3021:1_Elate7_HP1c.1083.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5473,14 +5473,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3026 3026_repset.9273878.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3026:repset.9273878.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3026 3026_repset.9273878.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3026.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3026 3026_720.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3026:720.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_880.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027:880.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3027:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_881.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027:881.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_repset.9276755.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3027:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_repset.9276755.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027:repset.9276755.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_pirrota_1121_CI8-2_HP2.881.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3027:1_CI8-2_HP2.881.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3027 3027_pirrota_1120_CI8-1_HP2.880.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3027:0_CI8-1_HP2.880.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_880.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027:880.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3027:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_881.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027:881.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_repset.9276755.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3027:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_repset.9276755.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3027:repset.9276755.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_pirrota_1121_CI8-2_HP2.881.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3027:1_CI8-2_HP2.881.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3027 3027_pirrota_1120_CI8-1_HP2.880.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3027:0_CI8-1_HP2.880.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3028 3028_pirrota_1058_L3_3_Input(20cyc).798.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3028:8_L3_3_Input(20cyc).798.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3028 3028_pirrota_1175_L3_6_HP2.968.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3028:5_L3_6_HP2.968.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3028 3028_repset.9699681.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3028:repset.9699681.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5489,14 +5489,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3028 3028_pirrota_1174_L3_3_HP2.967.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL HP2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3028:4_L3_3_HP2.967.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip HP2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3028 3028_repset.9699681.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 HP2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3028.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip HP2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3028 3028_968.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HP2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3028:968.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip HP2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3029 3029_repset.9699619.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_pirrota_1144_Kc4_HP2.946.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3029:4_Kc4_HP2.946.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_946.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029:946.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3029:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_947.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029:947.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_pirrota_1145_Kc5_HP2.947.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3029:5_Kc5_HP2.947.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3029:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3029 3029_repset.9699619.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029:repset.9699619.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_repset.9699619.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_pirrota_1144_Kc4_HP2.946.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3029:4_Kc4_HP2.946.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_946.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029:946.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3029:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_947.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029:947.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_pirrota_1145_Kc5_HP2.947.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3029:5_Kc5_HP2.947.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3029:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3029 3029_repset.9699619.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3029:repset.9699619.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3030 3030_pirrota_1346_Bg5_ISWI(Q4095).1098.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3030:6_Bg5_ISWI(Q4095).1098.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3030 3030_1098.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3030:1098.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3030 3030_1097.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3030:1097.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5505,22 +5505,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3030 3030_pirrota_1345_Bg3_ISWI(Q4095).1097.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3030:5_Bg3_ISWI(Q4095).1097.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3030 3030_repset.9700973.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ISWI:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3030.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3030 3030_pirrota_1205_B5_Input.936.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3030:5_B5_Input.936.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_repset.9700951.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_pirrota_1340_Kc-5_ISWI(Q4095).1092.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3031:40_Kc-5_ISWI(Q4095).1092.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_repset.9700951.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031:repset.9700951.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_pirrota_1337_Kc-4_ISWI(Q4095).1089.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3031:37_Kc-4_ISWI(Q4095).1089.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_1092.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031:1092.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3031:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3031:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3031 3031_1089.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031:1089.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_pirrota_1074_A21_ISWI(Q4095).832.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3032:4_A21_ISWI(Q4095).832.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_pirrota_1075_A20_ISWI(Q4095).833.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3032:5_A20_ISWI(Q4095).833.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_832.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032:832.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3032:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3032:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_repset.9699729.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_833.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032:833.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3032 3032_repset.9699729.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032:repset.9699729.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_repset.9700951.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_pirrota_1340_Kc-5_ISWI(Q4095).1092.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3031:40_Kc-5_ISWI(Q4095).1092.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_repset.9700951.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031:repset.9700951.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_pirrota_1337_Kc-4_ISWI(Q4095).1089.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3031:37_Kc-4_ISWI(Q4095).1089.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_1092.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031:1092.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3031:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3031:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3031 3031_1089.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3031:1089.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_pirrota_1074_A21_ISWI(Q4095).832.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3032:4_A21_ISWI(Q4095).832.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_pirrota_1075_A20_ISWI(Q4095).833.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3032:5_A20_ISWI(Q4095).833.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_832.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032:832.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3032:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3032:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_repset.9699729.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_833.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032:833.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3032 3032_repset.9699729.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ISWI:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3032:repset.9699729.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ISWI Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3034 3034_1109.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3034:1109.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3034 3034_pirrota_1357_EL9_JIL-1(Q3433).1109.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3034:7_EL9_JIL-1(Q3433).1109.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3034 3034_pirrota_1364_EL10_Input.1116.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3034:4_EL10_Input.1116.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5537,46 +5537,46 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3035 3035_repset.9700969.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3035:repset.9700969.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3035 3035_918.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3035:918.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3035 3035_repset.9700969.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3035.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3036:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_repset.9699509.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036:repset.9699509.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_916.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036:916.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_repset.9699509.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_915.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036:915.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_pirrota_1136_CI8-1_JIL1Q3433.915.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3036:6_CI8-1_JIL1Q3433.915.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3036:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3036 3036_pirrota_1137_CI8-2_JIL1Q3433.916.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3036:7_CI8-2_JIL1Q3433.916.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_913.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037:913.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_pirrota_1185_Kc-2_JIL1Q3433.914.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3037:5_Kc-2_JIL1Q3433.914.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_repset.9699860.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037:repset.9699860.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_pirrota_1184_Kc-1_JIL1Q3433.913.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3037:4_Kc-1_JIL1Q3433.913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_pirrota_480_Kc-2_Input(14cyc).291.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3037:80_Kc-2_Input(14cyc).291.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_repset.9699860.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_914.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037:914.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3037 3037_pirrota_479_Kc-1_Input(14cyc).290.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3037:79_Kc-1_Input(14cyc).290.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_pirrota_1067_A18_JIL-1(Q4170).825.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3038:7_A18_JIL-1(Q4170).825.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_pirrota_760_A17_Input.530.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3038:0_A17_Input.530.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_repset.9699727.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_pirrota_1066_A17_JIL-1(Q4170).824.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3038:6_A17_JIL-1(Q4170).824.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_repset.9699727.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038:repset.9699727.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_824.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038:824.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_pirrota_761_A18_Input.531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3038:1_A18_Input.531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3038 3038_825.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038:825.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_pirrota_1072_A17_MBD-R2(Q4167).830.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3039:2_A17_MBD-R2(Q4167).830.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_831.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039:831.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_830.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039:830.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_pirrota_760_A17_Input.530.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3039:0_A17_Input.530.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_repset.9699731.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_pirrota_761_A18_Input.531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3039:1_A18_Input.531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_pirrota_1073_A18_MBD-R2(Q4167).831.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3039:3_A18_MBD-R2(Q4167).831.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3039 3039_repset.9699731.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039:repset.9699731.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_842.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040:842.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_repset.9699471.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040:repset.9699471.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_pirrota_1085_A20_MLE(Q4142).843.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3040:5_A20_MLE(Q4142).843.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3040:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_pirrota_1084_A21_MLE(Q4142).842.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3040:4_A21_MLE(Q4142).842.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_repset.9699471.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_843.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040:843.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3040 3040_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3040:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3036:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_repset.9699509.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036:repset.9699509.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_916.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036:916.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_repset.9699509.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_915.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3036:915.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_pirrota_1136_CI8-1_JIL1Q3433.915.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3036:6_CI8-1_JIL1Q3433.915.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3036:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3036 3036_pirrota_1137_CI8-2_JIL1Q3433.916.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3036:7_CI8-2_JIL1Q3433.916.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_913.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037:913.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_pirrota_1185_Kc-2_JIL1Q3433.914.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3037:5_Kc-2_JIL1Q3433.914.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_repset.9699860.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037:repset.9699860.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_pirrota_1184_Kc-1_JIL1Q3433.913.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3037:4_Kc-1_JIL1Q3433.913.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_pirrota_480_Kc-2_Input(14cyc).291.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3037:80_Kc-2_Input(14cyc).291.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_repset.9699860.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_914.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3037:914.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3037 3037_pirrota_479_Kc-1_Input(14cyc).290.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3037:79_Kc-1_Input(14cyc).290.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_pirrota_1067_A18_JIL-1(Q4170).825.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3038:7_A18_JIL-1(Q4170).825.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_pirrota_760_A17_Input.530.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3038:0_A17_Input.530.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_repset.9699727.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_pirrota_1066_A17_JIL-1(Q4170).824.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3038:6_A17_JIL-1(Q4170).824.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_repset.9699727.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038:repset.9699727.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_824.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038:824.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_pirrota_761_A18_Input.531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3038:1_A18_Input.531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3038 3038_825.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3038:825.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_pirrota_1072_A17_MBD-R2(Q4167).830.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3039:2_A17_MBD-R2(Q4167).830.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_831.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039:831.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_830.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039:830.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_pirrota_760_A17_Input.530.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3039:0_A17_Input.530.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_repset.9699731.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_pirrota_761_A18_Input.531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3039:1_A18_Input.531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_pirrota_1073_A18_MBD-R2(Q4167).831.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3039:3_A18_MBD-R2(Q4167).831.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3039 3039_repset.9699731.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3039:repset.9699731.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_842.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040:842.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_repset.9699471.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040:repset.9699471.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_pirrota_1085_A20_MLE(Q4142).843.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3040:5_A20_MLE(Q4142).843.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3040:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_pirrota_1084_A21_MLE(Q4142).842.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3040:4_A21_MLE(Q4142).842.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_repset.9699471.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_843.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3040:843.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3040 3040_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3040:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3041 3041_repset.9700970.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3041:repset.9700970.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip MOF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3041 3041_pirrota_1204_B3_Input.935.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3041:4_B3_Input.935.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip MOF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3041 3041_1106.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3041:1106.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip MOF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5585,30 +5585,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3041 3041_1105.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3041:1105.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip MOF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3041 3041_repset.9700970.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3041.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip MOF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3041 3041_pirrota_1205_B5_Input.936.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3041:5_B5_Input.936.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip MOF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3042 3042_1108.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042:1108.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3042:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_pirrota_1355_CI8-1_MOF(Q4145).1107.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3042:5_CI8-1_MOF(Q4145).1107.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_pirrota_1356_CI8-2_MOF(Q4145).1108.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3042:6_CI8-2_MOF(Q4145).1108.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3042:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_repset.9700961.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042:repset.9700961.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_1107.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042:1107.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3042 3042_repset.9700961.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_repset.9700946.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043:repset.9700946.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_repset.9700946.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3043:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_pirrota_1352_Kc-5_MOF(Q4145).1104.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3043:2_Kc-5_MOF(Q4145).1104.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_1103.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043:1103.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_1104.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043:1104.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3043:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3043 3043_pirrota_1351_Kc-4_MOF(Q4145).1103.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3043:1_Kc-4_MOF(Q4145).1103.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_repset.9699736.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_pirrota_1080_A21_MOF(Q4145).838.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3044:0_A21_MOF(Q4145).838.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_pirrota_1081_A20_MOF(Q4145).839.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3044:1_A20_MOF(Q4145).839.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_839.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044:839.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3044:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3044:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_repset.9699736.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044:repset.9699736.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3044 3044_838.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044:838.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_1108.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042:1108.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3042:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_pirrota_1355_CI8-1_MOF(Q4145).1107.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3042:5_CI8-1_MOF(Q4145).1107.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_pirrota_1356_CI8-2_MOF(Q4145).1108.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3042:6_CI8-2_MOF(Q4145).1108.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3042:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_repset.9700961.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042:repset.9700961.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_1107.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042:1107.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3042 3042_repset.9700961.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3042.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_repset.9700946.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043:repset.9700946.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_repset.9700946.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3043:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_pirrota_1352_Kc-5_MOF(Q4145).1104.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3043:2_Kc-5_MOF(Q4145).1104.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_1103.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043:1103.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_1104.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3043:1104.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3043:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3043 3043_pirrota_1351_Kc-4_MOF(Q4145).1103.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3043:1_Kc-4_MOF(Q4145).1103.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_repset.9699736.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_pirrota_1080_A21_MOF(Q4145).838.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3044:0_A21_MOF(Q4145).838.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_pirrota_1081_A20_MOF(Q4145).839.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3044:1_A20_MOF(Q4145).839.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_839.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044:839.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3044:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3044:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_repset.9699736.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044:repset.9699736.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3044 3044_838.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MOF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3044:838.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MOF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3045 3045_pirrota_1350_Bg5_MRG15(Q2481).1102.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3045:50_Bg5_MRG15(Q2481).1102.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3045 3045_1102.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3045:1102.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3045 3045_pirrota_1349_Bg3_Mrg15(Q2481).1101.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3045:49_Bg3_Mrg15(Q2481).1101.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5617,46 +5617,46 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3045 3045_repset.9700971.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3045:repset.9700971.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3045 3045_1101.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3045:1101.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3045 3045_pirrota_1204_B3_Input.935.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3045:4_B3_Input.935.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_1099.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046:1099.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3046:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_1100.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046:1100.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_pirrota_1348_Kc-5_MRG15(Q2481).1100.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3046:8_Kc-5_MRG15(Q2481).1100.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3046:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_pirrota_1347_Kc-4_MRG15(Q2481).1099.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3046:7_Kc-4_MRG15(Q2481).1099.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_repset.9700947.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3046 3046_repset.9700947.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046:repset.9700947.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_835.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047:835.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_834.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047:834.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_repset.9699728.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_pirrota_1077_A20_MRG15(Q2481).835.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3047:7_A20_MRG15(Q2481).835.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_pirrota_1076_A21_MRG15(Q2481).834.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3047:6_A21_MRG15(Q2481).834.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3047:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3047:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3047 3047_repset.9699728.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047:repset.9699728.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_repset.9699730.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_pirrota_1068_A17_Nurf301(Q4145).826.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3048:8_A17_Nurf301(Q4145).826.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_826.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048:826.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_827.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048:827.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_pirrota_1069_A18_Nurf301(Q4145).827.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3048:9_A18_Nurf301(Q4145).827.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_pirrota_761_A18_Input.531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3048:1_A18_Input.531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_pirrota_760_A17_Input.530.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3048:0_A17_Input.530.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3048 3048_repset.9699730.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048:repset.9699730.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_636.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049:636.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_pirrota_619_A14_Input-18cycles.404.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3049:619_A14_Input-18cycles.404.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_repset.8061126.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_pirrota_806_A14_PCL.576.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3049:06_A14_PCL.57.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_pirrota_865_S14_PCL.636.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3049:65_S14_PCL.63.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_repset.8061126.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049:repset.8061126.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_576.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049:576.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3049 3049_pirrota_499_S14_Input18.320.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3049:499_S14_Input18.320.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_repset.9276743.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050:repset.9276743.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_867.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050:867.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3050:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_866.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050:866.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_repset.9276743.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_pirrota_1106_CI8-1_Piwi.866.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3050:6_CI8-1_Piwi.866.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_pirrota_1107_CI8-2_Piwi.867.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3050:7_CI8-2_Piwi.867.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3050 3050_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3050:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_1099.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046:1099.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3046:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_1100.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046:1100.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_pirrota_1348_Kc-5_MRG15(Q2481).1100.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3046:8_Kc-5_MRG15(Q2481).1100.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3046:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_pirrota_1347_Kc-4_MRG15(Q2481).1099.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3046:7_Kc-4_MRG15(Q2481).1099.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_repset.9700947.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3046 3046_repset.9700947.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3046:repset.9700947.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_835.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047:835.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_834.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047:834.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_repset.9699728.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_pirrota_1077_A20_MRG15(Q2481).835.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3047:7_A20_MRG15(Q2481).835.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_pirrota_1076_A21_MRG15(Q2481).834.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3047:6_A21_MRG15(Q2481).834.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3047:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3047:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3047 3047_repset.9699728.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3047:repset.9699728.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_repset.9699730.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_pirrota_1068_A17_Nurf301(Q4145).826.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3048:8_A17_Nurf301(Q4145).826.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_826.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048:826.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_827.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048:827.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_pirrota_1069_A18_Nurf301(Q4145).827.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3048:9_A18_Nurf301(Q4145).827.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_pirrota_761_A18_Input.531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3048:1_A18_Input.531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_pirrota_760_A17_Input.530.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3048:0_A17_Input.530.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3048 3048_repset.9699730.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3048:repset.9699730.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_636.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049:636.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_pirrota_619_A14_Input-18cycles.404.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3049:619_A14_Input-18cycles.404.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_repset.8061126.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_pirrota_806_A14_PCL.576.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3049:06_A14_PCL.57.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_pirrota_865_S14_PCL.636.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3049:65_S14_PCL.63.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_repset.8061126.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049:repset.8061126.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_576.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3049:576.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3049 3049_pirrota_499_S14_Input18.320.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3049:499_S14_Input18.320.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_repset.9276743.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050:repset.9276743.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_867.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050:867.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_pirrota_825_CL8-1_InputDNA(20cyc).596.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3050:5_CL8-1_InputDNA(20cyc).596.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_866.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050:866.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_repset.9276743.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3050.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_pirrota_1106_CI8-1_Piwi.866.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3050:6_CI8-1_Piwi.866.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_pirrota_1107_CI8-2_Piwi.867.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3050:7_CI8-2_Piwi.867.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3050 3050_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3050:6_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3051 3051_pirrota_1058_L3_3_Input(20cyc).798.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL PIWI:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3051:8_L3_3_Input(20cyc).798.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip PIWI Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3051 3051_795.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle PIWI:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3051:795.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip PIWI Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3051 3051_repset.9276436.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle PIWI:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3051:repset.9276436.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip PIWI Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5681,14 +5681,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3053 3053_pirrota_1245_L3_2_Input(20cycles).1003.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3053:5_L3_2_Input(20cycles).1003.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3053 3053_repset.9700430.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3053:repset.9700430.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3053 3053_1058.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3053:1058.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3054 3054_repset.9699866.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054:repset.9699866.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_908.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054:908.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_pirrota_1224_A14_PR-Set7_Q3484.908.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3054:24_A14_PR-Set7_Q3484.908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_850.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054:850.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_pirrota_1212_A12_PR-Set7_Q3484.850.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3054:12_A12_PR-Set7_Q3484.850.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_pirrota_803_A14.input.566.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3054:3_A14.input.566.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_pirrota_802_A12.input.565.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3054:2_A12.input.565.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3054 3054_repset.9699866.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_repset.9699866.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054:repset.9699866.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_908.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054:908.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_pirrota_1224_A14_PR-Set7_Q3484.908.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3054:24_A14_PR-Set7_Q3484.908.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_850.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054:850.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_pirrota_1212_A12_PR-Set7_Q3484.850.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3054:12_A12_PR-Set7_Q3484.850.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_pirrota_803_A14.input.566.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3054:3_A14.input.566.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_pirrota_802_A12.input.565.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3054:2_A12.input.565.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3054 3054_repset.9699866.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PR-Set7:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3054.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PR-Set7 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3055 3055_pirrota_618_B3_PSC.400.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3055:18_B3_PSC.400.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3055 3055_repset.4621848.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3055:repset.4621848.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3055 3055_400.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3055:400.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5697,30 +5697,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3055 3055_pirrota_631_B5_PSC.401.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3055:31_B5_PSC.401.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3055 3055_401.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3055:401.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3055 3055_repset.4621848.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Psc:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3055.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_pirrota_570_S14PSC.376.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3056:570_S14PSC.376.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_repset.4161607.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056:repset.4161607.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_145.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056:145.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_repset.4161607.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_pirrota_298_S11_Input.143.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3056:298_S11_Input.143.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_pirrota_300_S11_Psc.145.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3056:300_S11_Psc.145.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_376.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056:376.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3056 3056_pirrota_499_S14_Input18.320.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3056:499_S14_Input18.320.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3057:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_994.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057:994.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_pirrota_1235_A20_RPD3.993.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3057:5_A20_RPD3.993.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_repset.9699872.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3057:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_993.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057:993.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_pirrota_1236_A21_RPD3.994.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3057:6_A21_RPD3.994.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3057 3057_repset.9699872.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057:repset.9699872.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_940.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058:940.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_941.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058:941.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_pirrota_1210_A20_SPT16.941.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3058:10_A20_SPT16.941.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3058:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_repset.9699864.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3058:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_pirrota_1209_A21_SPT16.940.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3058:09_A21_SPT16.940.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3058 3058_repset.9699864.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058:repset.9699864.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_pirrota_570_S14PSC.376.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3056:570_S14PSC.376.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_repset.4161607.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056:repset.4161607.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_145.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056:145.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_repset.4161607.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_pirrota_298_S11_Input.143.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3056:298_S11_Input.143.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_pirrota_300_S11_Psc.145.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3056:300_S11_Psc.145.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_376.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3056:376.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3056 3056_pirrota_499_S14_Input18.320.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3056:499_S14_Input18.320.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3057:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_994.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057:994.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_pirrota_1235_A20_RPD3.993.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3057:5_A20_RPD3.993.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_repset.9699872.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3057:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_993.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057:993.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_pirrota_1236_A21_RPD3.994.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3057:6_A21_RPD3.994.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3057 3057_repset.9699872.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3057:repset.9699872.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_940.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058:940.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_941.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058:941.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_pirrota_1210_A20_SPT16.941.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3058:10_A20_SPT16.941.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3058:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_repset.9699864.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3058:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_pirrota_1209_A21_SPT16.940.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3058:09_A21_SPT16.940.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3058 3058_repset.9699864.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle SPT16:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3058:repset.9699864.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip SPT16 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3059 3059_969.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3059:969.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip Su(var)3-7 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3059 3059_repset.9700019.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 Su(var)3-7:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3059.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip Su(var)3-7 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3059 3059_pirrota_1246_L3_4_Input(20cyc).1004.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3059:6_L3_4_Input(20cyc).1004.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip Su(var)3-7 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -5729,30 +5729,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3059 3059_pirrota_1176_L3_2_Su(var)3-7.969.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3059:6_L3_2_Su(var)3-7.969.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip Su(var)3-7 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3059 3059_pirrota_1245_L3_2_Input(20cycles).1003.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3059:5_L3_2_Input(20cycles).1003.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip Su(var)3-7 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3059 3059_repset.9700019.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3059:repset.9700019.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip Su(var)3-7 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3060 3060_pirrota_1164_Kc4(Su(var)3-7.956.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3060:4_Kc4(Su(var)3-7.956.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_957.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060:957.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_pirrota_1165_Kc5_Su(var)3-7.957.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3060:5_Kc5_Su(var)3-7.957.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3060:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_repset.9700021.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060:repset.9700021.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_956.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060:956.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_repset.9700021.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3060 3060_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3060:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3061:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_repset.9699503.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061:repset.9699503.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_893.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061:893.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_pirrota_1124_A20_Su(var)3-9.892.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3061:4_A20_Su(var)3-9.892.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_892.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061:892.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3061:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_repset.9699503.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3061 3061_pirrota_1125_A21_Su(var)3-9.893.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3061:5_A21_Su(var)3-9.893.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_repset.9699865.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062:repset.9699865.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_906.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062:906.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_pirrota_1222__Kc4_WDS_Q2691.906.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3062:2__Kc4_WDS_Q2691.906.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_pirrota_1221_Kc5_Input.905.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3062:1_Kc5_Input.905.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_repset.9699865.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_pirrota_1223_Kc5_WDS_Q2691.907.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3062:3_Kc5_WDS_Q2691.907.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_907.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062:907.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3062 3062_pirrota_1220_Kc4_Input.904.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3062:0_Kc4_Input.904.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_pirrota_1164_Kc4(Su(var)3-7.956.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3060:4_Kc4(Su(var)3-7.956.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_957.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060:957.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_pirrota_1165_Kc5_Su(var)3-7.957.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3060:5_Kc5_Su(var)3-7.957.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3060:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_repset.9700021.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060:repset.9700021.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_956.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060:956.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_repset.9700021.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3060.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3060 3060_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3060:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3061:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_repset.9699503.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061:repset.9699503.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_893.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061:893.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_pirrota_1124_A20_Su(var)3-9.892.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3061:4_A20_Su(var)3-9.892.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_892.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061:892.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3061:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_repset.9699503.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3061.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3061 3061_pirrota_1125_A21_Su(var)3-9.893.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3061:5_A21_Su(var)3-9.893.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_repset.9699865.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062:repset.9699865.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_906.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062:906.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_pirrota_1222__Kc4_WDS_Q2691.906.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3062:2__Kc4_WDS_Q2691.906.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_pirrota_1221_Kc5_Input.905.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3062:1_Kc5_Input.905.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_repset.9699865.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_pirrota_1223_Kc5_WDS_Q2691.907.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3062:3_Kc5_WDS_Q2691.907.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_907.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3062:907.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3062 3062_pirrota_1220_Kc4_Input.904.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL WDS:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3062:0_Kc4_Input.904.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip WDS Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3064 3064_repset.4161796.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ZW5:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3064.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3064 3064_pirrota_365_B2_Input.208.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3064:5_B2_Input.208.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3064 3064_pirrota_364_B1_Input.207.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3064:4_B1_Input.207.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -5775,20 +5775,20 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3066 3066_Snyder_GEI-11_GFP_L3_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle GEI-11:Developmental-Stage=Larvae-L3-stage#Strain=OP179#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3066:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq GEI-11 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP179#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3066 3066_Snyder_GEI-11_Input_L3_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq GEI-11:Developmental-Stage=Larvae-L3-stage#Strain=OP179#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3066.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq GEI-11 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP179#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3066 3066_Snyder_GEI-11_Input_L3_rep2.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq GEI-11:Developmental-Stage=Larvae-L3-stage#Strain=OP179#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3066.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq GEI-11 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP179#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3068:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3068:combined_peaks.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3068.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3068:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep2.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_Input_LE_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_Input_LE.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3068:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_Input_LE_rep2.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_Input_LE_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3068:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3068:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3068 3068_Snyder_CEH-26_GFP_LE_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryos#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryos#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3068:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryonic stage Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_combined_peaks.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3068:combined_peaks.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryonic stage Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3068.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3068:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep2.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryonic stage Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryonic stage Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryonic stage Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_Input_LE_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_Input_LE.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3068:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_Input_LE_rep2.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_Input_LE_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3068:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3068:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3068 3068_Snyder_CEH-26_GFP_LE_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq CEH-26:Developmental-Stage=Late-Embryonic-stage#Strain=OP500#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3068.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq CEH-26 Late Embryonic stage Developmental-Stage=Late Embryonic stage#Strain=OP500#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3071 3071_Snyder_MEF-2_GFP_L1_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle MEF-2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP301#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3071:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq MEF-2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP301#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3071 3071_Snyder_MEF-2_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle MEF-2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP301#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3071:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq MEF-2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP301#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3071 3071_Snyder_MEF-2_GFP_L1_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle MEF-2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP301#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3071:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq MEF-2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP301#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -5931,488 +5931,488 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3082 3082_Snyder_SEA2_Input_L3_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SEA-2:Developmental-Stage=Larvae-L3-stage#Strain=OP193#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3082.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SEA-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP193#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3082 3082_Snyder_SEA2_GFP_L3_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SEA-2:Developmental-Stage=Larvae-L3-stage#Strain=OP193#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3082:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SEA-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP193#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3082 3082_Snyder_SEA2_GFP_L3_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SEA-2:Developmental-Stage=Larvae-L3-stage#Strain=OP193#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3082.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SEA-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP193#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites -3083 3083_SRR039440.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:40.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R33s_1_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:33s_1_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R15s_3_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_3_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R23s_6_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:23s_6_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039445.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:45.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R7s_1_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:7s_1_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R15s_5_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_5_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R15s_2_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_2_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:34.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039444.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:44.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039442.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:42.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039439.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R33s_2_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:33s_2_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:33.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039441.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:41.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R15s_1_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_1_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039443.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:43.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R15s_4_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_4_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_Dmel_R15s_6_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_6_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3083 3083_SRR039435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:35.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Female 8 days Developmental-Stage=Dmel Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R11s_6_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_6_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039448.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:48.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R7s_2_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:7s_2_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R11s_5_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_5_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039438.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R33s_3_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:33s_3_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039446.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:46.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:36.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R11s_3_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_3_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R11s_2_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_2_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039452.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:52.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:37.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039447.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:47.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R33s_4_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:33s_4_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039449.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:49.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R11s_1_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_1_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R11s_4_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_4_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039450.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_SRR039451.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:51.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3084 3084_Dmel_R23s_7_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmel-Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:23s_7_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Dmel Adult Male 8 days Developmental-Stage=Dmel Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3085 3085_Dpse_R15s_8_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:15s_8_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R11s_7_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:11s_7_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R7s_4_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:7s_4_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034801.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:801.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034797.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:797.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R16s_1_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:16s_1_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034792.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:792.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R15s_7_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:15s_7_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R31s_8_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:31s_8_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034793.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:793.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034795.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:795.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034799.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:799.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034794.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:794.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034798.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:798.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R11s_8_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:11s_8_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034800.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:800.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R16s_2_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:16s_2_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R33s_7_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:33s_7_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_Dpse_R33s_8_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:33s_8_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3085 3085_SRR034796.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:796.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Developmental-Stage=Dpse Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3086 3086_SRR037511.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:11.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R42s_8_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_8_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R21s_3_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_3_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037508.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:08.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R7s_6_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:7s_6_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037517.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:17.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037515.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:15.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037514.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:14.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R42s_7_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_7_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037509.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:09.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037512.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:12.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R21s_5_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_5_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R21s_6_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_6_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R42s_6_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_6_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037518.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:18.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037513.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:13.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R42s_5_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_5_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037516.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:16.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R21s_1_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_1_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R21s_4_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_4_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_Dmoj_R21s_2_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_2_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3086 3086_SRR037510.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:10.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Developmental-Stage=Dmoj Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037506.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:506.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R7s_5_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:7s_5_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037497.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:497.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R20s_3_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_3_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R42s_4_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_4_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R20s_5_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_5_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R20s_1_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_1_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037501.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:501.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R42s_1_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_1_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037498.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:498.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R20s_4_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_4_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037507.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:507.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037502.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:502.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R20s_2_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_2_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037505.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:505.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037503.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:503.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037500.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:500.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037504.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:504.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R42s_3_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_3_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R20s_6_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_6_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_Dmoj_R42s_2_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_2_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3087 3087_SRR037499.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:499.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Developmental-Stage=Dmoj Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3089 3089_SRR031767.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_SRR074430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_100611_600FPAAXX_CG10128_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:100611_600FPAAXX_CG10128_2_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_091022_432AVAAXX_CG10128_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:091022_432AVAAXX_CG10128_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_090610_4277KAAXX_CG10128_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:610_4277KAAXX_CG10128_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_091110_42PFPAAXX_CG10128_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:091110_42PFPAAXX_CG10128_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_090508_427C7AAXX_CG10128_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:508_427C7AAXX_CG10128_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_SRR074432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_SRR031766.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3089 3089_SRR074431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_SRR074546.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_SRR031733.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_SRR074545.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_SRR031732.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_100611_600FPAAXX_CG9373_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:100611_600FPAAXX_CG9373_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_091002_42P86AAXX_CG9373_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:091002_42P86AAXX_CG9373_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_SRR074544.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_090512_4277EAAXX_CG9373_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_090311_30WEDAAXX_CG9373_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3090 3090_100611_600FPAAXX_CG9373_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:100611_600FPAAXX_CG9373_2_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_SRR074537.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_100520_600A7AAXX_CG8781_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:520_600A7AAXX_CG8781_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_100409_600BLAAXX_CG8781_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:409_600BLAAXX_CG8781_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_100520_600A7AAXX_CG8781_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:520_600A7AAXX_CG8781_2_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_SRR074534.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_100409_600BLAAXX_CG8781_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:409_600BLAAXX_CG8781_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_SRR074535.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3091 3091_SRR074536.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3092 3092_100520_600A7AAXX_CG8636_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:520_600A7AAXX_CG8636_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3092 3092_SRR074531.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3092.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3092 3092_100408_600A5AAXX_CG8636_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:408_600A5AAXX_CG8636_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3092 3092_SRR074530.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:30.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3092 3092_100408_600A5AAXX_CG8636_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3092.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3092 3092_SRR074529.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:29.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_090508_427C7AAXX_CG7437_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:508_427C7AAXX_CG7437_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_SRR031770.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_091022_432AVAAXX_CG7437_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:022_432AVAAXX_CG7437_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_SRR031771.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_SRR074521.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_091110_42PFPAAXX_CG7437_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:110_42PFPAAXX_CG7437_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_SRR074522.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3093 3093_090610_4277KAAXX_CG7437_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:610_4277KAAXX_CG7437_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3094 3094_100331_61F5NAAXX_CG6779_1_s_1_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3094.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3094 3094_100331_61F5NAAXX_CG6779_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3094:331_61F5NAAXX_CG6779_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3094 3094_100420_61046AAXX_CG6779_2_s_4_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3094.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3094 3094_100420_61046AAXX_CG6779_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3094:420_61046AAXX_CG6779_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_100429_600CAAAXX_CG6227_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3095.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_100429_600CAAAXX_CG6227_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:29_600CAAAXX_CG6227_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_100430_6103YAAXX_CG6227_1_s_7_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:100430_6103YAAXX_CG6227_1_s_7_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_SRR074516.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3095:SRR074516.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_SRR074515.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:SRR074515.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_100429_600CAAAXX_CG6227_1_s_2_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:100429_600CAAAXX_CG6227_1_s_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_100429_600CAAAXX_CG6227_2_s_3_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3095:100429_600CAAAXX_CG6227_2_s_3_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3095 3095_100430_6103YAAXX_CG6227_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:30_6103YAAXX_CG6227_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_SRR031751.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:31751.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_SRR074505.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_090407_3138TAAXX_CG5655_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:090407_3138TAAXX_CG5655_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_100730_61RPDAAXX_CG5655_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:100730_61RPDAAXX_CG5655_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_SRR031750.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:31750.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_091118_42W4VAAXX_CG5655_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:1118_42W4VAAXX_CG5655_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_SRR074506.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3096.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_090527_4277RAAXX_CG5655_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:090527_4277RAAXX_CG5655_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_090925_42PG4AAXX_CG5655_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:0925_42PG4AAXX_CG5655_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_SRR074504.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_SRR074421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:74421.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3096 3096_100730_61RPDAAXX_CG5655_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3096.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3097 3097_100331_61F5NAAXX_CG33106_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3097.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3097 3097_100323_61F6BAAXX_CG33106_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3097.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3097 3097_SRR074479.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3097.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3097 3097_SRR074475.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3097.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3098 3098_100520_600A7AAXX_CG32423_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:520_600A7AAXX_CG32423_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3098 3098_100409_600BLAAXX_CG32423_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3098.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3098 3098_SRR074478.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3098.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3098 3098_SRR074477.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3098 3098_100409_600BLAAXX_CG32423_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:409_600BLAAXX_CG32423_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3098 3098_SRR074476.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3099 3099_090407_3138TAAXX_CG17838_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:407_3138TAAXX_CG17838_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3099 3099_090925_42PG4AAXX_CG17838_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3099.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3099 3099_SRR031741.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3099 3099_SRR031740.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3099 3099_SRR074462.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3099.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3099 3099_090527_4277RAAXX_CG17838_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:527_4277RAAXX_CG17838_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3100 3100_SRR074445.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3100.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3100 3100_SRR074446.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3100.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3100 3100_100408_600A5AAXX_CG1101_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3100.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3100 3100_100408_600A5AAXX_CG1101_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3100.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3101 3101_SRR031754.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3101 3101_SRR074433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3101.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3101 3101_090414_313ATAAXX_CG10203_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:414_313ATAAXX_CG10203_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3101 3101_SRR031755.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3101 3101_090925_42PG4AAXX_CG10203_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3101.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3101 3101_090601_4277DAAXX_CG10203_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:601_4277DAAXX_CG10203_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3102 3102_SRR074532.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3102.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3102 3102_100409_600BLAAXX_CG8749_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3102.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3102 3102_100409_600BLAAXX_CG8749_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3102.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3102 3102_SRR074533.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3102.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_090508_427C7AAXX_CG5821_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:508_427C7AAXX_CG5821_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_091118_42W4VAAXX_CG5821_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:118_42W4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_SRR074508.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_090610_4277KAAXX_CG5821_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:610_4277KAAXX_CG5821_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_SRR031775.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_SRR031774.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_091022_432AVAAXX_CG5821_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:022_432A.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3103 3103_SRR074507.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3104 3104_SRR074498.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3104.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3104 3104_100323_61F6BAAXX_CG5170_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3104.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3104 3104_100323_61F6BAAXX_CG5170_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3104.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3104 3104_SRR074497.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3104.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_100611_600FPAAXX_CG4602_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:100611_600FPAAXX_CG4602_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_090407_3138TAAXX_CG4602_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:407_3138TAAXX_CG4602_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_SRR031748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_090925_42PG4AAXX_CG4602_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:090925_42PG4AAXX_CG4602_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_SRR074488.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_090527_4277RAAXX_CG4602_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:527_4277RAAXX_CG4602_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_SRR074487.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3105 3105_SRR031749.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3106 3106_100429_600CAAAXX_CG6841_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3106.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3106 3106_100429_600CAAAXX_CG6841_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3106.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3106 3106_SRR074518.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3106.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3106 3106_SRR074517.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3106.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3107 3107_100430_6103YAAXX_CG6203_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3107.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3107 3107_SRR074492.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3107.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3107 3107_100323_61F6BAAXX_CG6203_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3107.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3107 3107_SRR074513.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3107.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3108 3108_100420_61046AAXX_CG5422_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:420_61046.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3108 3108_SRR074422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3108 3108_SRR074499.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3108.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3108 3108_100420_61046AAXX_CG5422_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3108.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3108 3108_100520_600A7AAXX_CG5422_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:520_600A7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3108 3108_SRR074423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_SRR074539.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_101004_61RP2AAXX_CG8912_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:1004_61RP2AAXX_CG8912_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_100520_61DAYAAXX_CG8912_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:0520_61DAYAAXX_CG8912_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_101004_61RP2AAXX_CG8912_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:1004_61RP2AAXX_CG8912_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_SRR074540.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:40.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_SRR074542.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_SRR074538.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_SRR074541.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_100520_61DAYAAXX_CG8912_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:0520_61DAYAAXX_CG8912_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_100323_61F6BAAXX_CG8912_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:0323_61F6BAAXX_CG8912_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_100323_61F6BAAXX_CG8912_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:0323_61F6BAAXX_CG8912_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3109 3109_SRR074543.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3110 3110_100423_600A6AAXX_CG8241_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3110.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3110 3110_100423_600A6AAXX_CG8241_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3110.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3110 3110_SRR074527.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3110.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3110 3110_SRR074528.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3110.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3111 3111_SRR031742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3111 3111_SRR031743.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3111 3111_090527_4277RAAXX_CG16901_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:527_4277RAAXX_CG16901_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3111 3111_090925_42PG4AAXX_CG16901_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3111.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3111 3111_SRR074459.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3111.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3111 3111_090407_3138TAAXX_CG16901_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:407_3138TAAXX_CG16901_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_090925_42PG4AAXX_CG13425_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3112.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_090407_3138TAAXX_CG13425_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:090407_3138TAAXX_CG13425_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_100730_61RPDAAXX_CG13425_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:100730_61RPDAAXX_CG13425_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_090527_4277RAAXX_CG13425_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:090527_4277RAAXX_CG13425_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_SRR031744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:31744.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_SRR074420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:74420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_100730_61RPDAAXX_CG13425_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3112.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_SRR074451.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3112.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_SRR031745.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:31745.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3112 3112_SRR074452.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3112.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_100520_600A7AAXX_CG10279_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:520_600A7AAXX_CG10279_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_SRR074434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_100520_600A7AAXX_CG10279_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:520_600A7AAXX_CG10279_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_SRR074437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_SRR074438.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_SRR074435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_100430_6103YAAXX_CG10279_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:430_6103YAAXX_CG10279_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_100429_600CAAAXX_CG10279_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:429_600CAAAXX_CG10279_2_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_100429_600CAAAXX_CG10279_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:429_600CAAAXX_CG10279_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3113 3113_SRR074436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3114 3114_100408_600A5AAXX_CG6049_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3114.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3114 3114_100408_600A5AAXX_CG6049_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3114.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3114 3114_SRR074511.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3114.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3114 3114_SRR074512.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3114.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3115 3115_SRR074481.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3115.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3115 3115_SRR074482.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3115.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3115 3115_100423_600A6AAXX_CG3312_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3115.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3115 3115_100423_600A6AAXX_CG3312_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3115.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3116 3116_100331_61F5NAAXX_CG31716_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3116.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3116 3116_SRR074480.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3116.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3116 3116_SRR074474.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3116.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3116 3116_100323_61F6BAAXX_CG31716_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3116.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_SRR031747.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_SRR031746.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_090527_4277RAAXX_CG30122_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:527_4277RAAXX_CG30122_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_090925_42PG4AAXX_CG30122_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:090925_42PG4AAXX_CG30122_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_100611_600FPAAXX_CG30122_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:100611_600FPAAXX_CG30122_2_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_SRR074471.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_090407_3138TAAXX_CG30122_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:407_3138TAAXX_CG30122_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3117 3117_SRR074470.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3118 3118_100409_600BLAAXX_CG11266_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3118.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3118 3118_100409_600BLAAXX_CG11266_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3118.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3118 3118_SRR074447.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3118.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3118 3118_SRR074448.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3118.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3119 3119_100430_6103YAAXX_CG8019_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3119.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3119 3119_100429_600CAAAXX_CG8019_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3119.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3119 3119_SRR074525.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3119.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3119 3119_SRR074526.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3119.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_SRR031764.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_091110_42PFPAAXX_CG7971_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:110_42PFPAAXX_CG7971_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_SRR074523.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_090504_427EDAAXX_CG7971_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:504_427EDAAXX_CG7971_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_091022_432AVAAXX_CG7971_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:022_432AVAAXX_CG7971_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_090610_4277KAAXX_CG7971_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:610_4277KAAXX_CG7971_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_SRR074524.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3120 3120_SRR031765.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3121 3121_100430_6103YAAXX_CG4816_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3121.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3121 3121_SRR074491.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3121.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3121 3121_100323_61F6BAAXX_CG4816_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3121.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3121 3121_SRR074514.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3121.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3122 3122_SRR074484.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3122.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3122 3122_SRR074483.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3122.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3122 3122_100430_6103YAAXX_CG3584_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3122.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3122 3122_100430_6103YAAXX_CG3584_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3122.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3123 3123_100429_600CAAAXX_CG1646_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3123.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3123 3123_SRR074455.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3123.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3123 3123_100423_600A6AAXX_CG1646_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3123.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3123 3123_SRR074456.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3123.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_SRR074443.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_090601_4277DAAXX_CG10851_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:601_4277DAAXX_CG10851_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_091002_42P86AAXX_CG10851_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:091002_42P86AAXX_CG10851_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_100611_600FPAAXX_CG10851_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:100611_600FPAAXX_CG10851_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_SRR031761.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_090420_313YUAAXX_CG10851_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:420_313YUAAXX_CG10851_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_SRR074444.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3124 3124_SRR031760.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_091110_42PFPAAXX_CG5099_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:110_42PFPAAXX_CG5099_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_SRR031735.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_SRR074496.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_SRR031734.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_090311_30WEDAAXX_CG5099_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_091002_42P86AAXX_CG5099_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:002_42P86AAXX_CG5099_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_090512_4277EAAXX_CG5099_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3125 3125_SRR074495.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3126 3126_SRR074490.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3126.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3126 3126_SRR074489.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3126.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3126 3126_100423_600A6AAXX_CG4760_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3126.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3126 3126_100420_61046AAXX_CG4760_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3126.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_SRR074463.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3127.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_091218_42WM6AAXX_CG18350_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3127.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_100520_61DAYAAXX_CG18350_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:520_61DAYAAXX_CG18350_2_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_SRR074464.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_SRR074465.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_100420_61046AAXX_CG18350_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:420_61046AAXX_CG18350_2_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_SRR074466.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3127 3127_100520_600A7AAXX_CG18350_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:520_600A7AAXX_CG18350_2_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3128 3128_100408_600A5AAXX_CG16788_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3128.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3128 3128_100408_600A5AAXX_CG16788_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3128.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3128 3128_SRR074458.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3128.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3128 3128_SRR074457.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3128.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_SRR031772.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_091118_42W4VAAXX_CG1559_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:118_42W4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_091022_432AVAAXX_CG1559_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:022_432A.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_SRR031773.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_090508_427C7AAXX_CG1559_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:508_427C7AAXX_CG1559_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_SRR074454.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_SRR074453.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3129 3129_090610_4277KAAXX_CG1559_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:610_4277KAAXX_CG1559_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3130 3130_100420_61046AAXX_CG10377_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3130.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3130 3130_100331_61F5NAAXX_CG10377_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3130.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3130 3130_SRR074442.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3130.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3130 3130_SRR074441.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3130.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3131 3131_SRR074547.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3131.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3131 3131_100331_61F5NAAXX_CG9412_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3131.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3131 3131_SRR074548.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3131.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3131 3131_100331_61F5NAAXX_CG9412_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3131.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_090311_30WEDAAXX_CG6946_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_091118_42W4VAAXX_CG6946_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:118_42W4VAAXX_CG6946_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_SRR031731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_090512_4277EAAXX_CG6946_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_091002_42P86AAXX_CG6946_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:002_42P86AAXX_CG6946_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_SRR031730.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_SRR074520.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:20.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3132 3132_SRR074519.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:19.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3133 3133_090925_42PG4AAXX_CG1987_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3133.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3133 3133_090527_4277RAAXX_CG1987_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:527_4277RAAXX_CG1987_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3133 3133_SRR031753.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3133 3133_SRR074469.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3133.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3133 3133_090414_313ATAAXX_CG1987_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:414_313ATAAXX_CG1987_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3133 3133_SRR031752.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_SRR031736.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_090512_4277EAAXX_CG9983_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_SRR074550.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_090311_30WEDAAXX_CG9983_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_091002_42P86AAXX_CG9983_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:002_42P86AAXX_CG9983_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_SRR031737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_091110_42PFPAAXX_CG9983_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:110_42PFPAAXX_CG9983_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3134 3134_SRR074549.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:49.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_SRR074502.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_090414_313ATAAXX_CG5442_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:414_313ATAAXX_CG5442_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_SRR074501.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_091002_42P86AAXX_CG5442_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:091002_42P86AAXX_CG5442_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_090601_4277DAAXX_CG5442_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:601_4277DAAXX_CG5442_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_100611_600FPAAXX_CG5442_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:100611_600FPAAXX_CG5442_2_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_SRR074500.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3135 3135_SRR074503.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_SRR031769.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_SRR031768.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_090508_427C7AAXX_CG31000_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:508_427C7AAXX_CG31000_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_091022_432AVAAXX_CG31000_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:022_432AVAAXX_CG31000_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_SRR074472.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_091110_42PFPAAXX_CG31000_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:110_42PFPAAXX_CG31000_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_090610_4277KAAXX_CG31000_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:610_4277KAAXX_CG31000_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3136 3136_SRR074473.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_090601_4277DAAXX_CG17136_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:601_4277DAAXX_CG17136_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_SRR074460.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_SRR031757.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_091110_42PFPAAXX_CG17136_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:110_42PFPAAXX_CG17136_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_SRR074461.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_SRR031756.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_090414_313ATAAXX_CG17136_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:414_313ATAAXX_CG17136_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3137 3137_091002_42P86AAXX_CG17136_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:002_42P86AAXX_CG17136_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_SRR074429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3138.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_100430_6103YAAXX_Untreated_32_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3138.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_091218_42WM6AAXX_Untreated_31_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3138.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_090512_4277EAAXX_Untreated_6_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_SRR031729.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_SRR074428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3138.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_SRR031728.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3138 3138_090311_30WEDAAXX_Untreated_6_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3139 3139_SRR074494.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3139.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3139 3139_100331_61F5NAAXX_CG4878_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3139.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3139 3139_100331_61F5NAAXX_CG4878_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3139.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3139 3139_SRR074493.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3139.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3140 3140_SRR074485.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3140.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3140 3140_100423_600A6AAXX_CG4262_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3140.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3140 3140_100423_600A6AAXX_CG4262_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3140.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3140 3140_SRR074486.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3140.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_SRR031763.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_091118_42W4VAAXX_CG18426_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:118_42W4VAAXX_CG18426_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_090610_4277KAAXX_CG18426_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:610_4277KAAXX_CG18426_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_SRR074467.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_SRR074468.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_091022_432AVAAXX_CG18426_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:022_432AVAAXX_CG18426_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_090504_427EDAAXX_CG18426_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:504_427EDAAXX_CG18426_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3141 3141_SRR031762.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_091110_42PFPAAXX_CG12749_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:110_42PFPAAXX_CG12749_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_SRR031738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_090512_4277EAAXX_CG12749_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_SRR074450.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_SRR074449.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:49.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_091002_42P86AAXX_CG12749_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:002_42P86AAXX_CG12749_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_SRR031739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3142 3142_090311_30WEDAAXX_CG12749_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_SRR074426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:74426.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_100730_61RPDAAXX_CG7878_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:100730_61RPDAAXX_CG7878_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_100730_61RPDAAXX_CG7878_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:100730_61RPDAAXX_CG7878_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_SRR031782.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:31782.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_SRR031783.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:31783.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_SRR074427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:74427.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_090512_4277EAAXX_CG7878_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:090512_4277EAAXX_CG7878_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_SRR031781.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:31781.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_090624_42ENMAAXX_CG7878_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:090624_42ENMAAXX_CG7878_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3143 3143_090624_42ENMAAXX_CG7878_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:090624_42ENMAAXX_CG7878_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_SRR031776.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_090624_42ENMAAXX_CG5836_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:624_42ENMAAXX_CG5836_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_SRR074509.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:09.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_SRR031777.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_091022_432AVAAXX_CG5836_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:022_432A.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_SRR074510.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_091118_42W4VAAXX_CG5836_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:118_42W4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3144 3144_090508_427C7AAXX_CG5836_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:508_427C7AAXX_CG5836_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_100730_61RPDAAXX_CG3249_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:100730_61RPDAAXX_CG3249_2_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_SRR074425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:74425.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_090508_427C7AAXX_CG3249_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:090508_427C7AAXX_CG3249_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_100730_61RPDAAXX_CG3249_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:100730_61RPDAAXX_CG3249_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_SRR031779.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:31779.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_090624_42ENMAAXX_CG3249_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:090624_42ENMAAXX_CG3249_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_SRR031778.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:31778.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_090624_42ENMAAXX_CG3249_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:090624_42ENMAAXX_CG3249_2_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_SRR074424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:74424.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3145 3145_SRR031780.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:31780.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3146 3146_100420_61046AAXX_CG10328_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3146.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3146 3146_100420_61046AAXX_CG10328_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3146.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3146 3146_SRR074440.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3146.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3146 3146_SRR074439.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3146.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3083 3083_SRR039440.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:40.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R33s_1_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:33s_1_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R15s_3_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_3_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R23s_6_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:23s_6_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039445.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:45.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R7s_1_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:7s_1_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R15s_5_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_5_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R15s_2_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_2_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:34.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039444.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:44.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039442.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:42.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039439.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R33s_2_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:33s_2_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:33.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039441.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:41.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R15s_1_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_1_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039443.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:43.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R15s_4_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_4_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_Dmel_R15s_6_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:15s_6_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3083 3083_SRR039435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-8-days#Strain=Oregon-R#Tissue=Dmel-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3083:35.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female 8 days Developmental-Stage=Adult Female 8 days#Strain=Oregon-R#Tissue=Dmel Female heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R11s_6_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_6_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039448.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:48.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R7s_2_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:7s_2_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R11s_5_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_5_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039438.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R33s_3_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:33s_3_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039446.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:46.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:36.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R11s_3_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_3_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R11s_2_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_2_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039452.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:52.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:37.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039447.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:47.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R33s_4_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:33s_4_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039449.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:49.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R11s_1_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_1_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R11s_4_bowtie_36.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:11s_4_bowtie_36.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039450.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_SRR039451.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:51.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3084 3084_Dmel_R23s_7_bowtie_75.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male-8-days#Strain=Oregon-R#Tissue=Dmel-Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3084:23s_7_bowtie_75.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult Male 8 days Developmental-Stage=Adult Male 8 days#Strain=Oregon-R#Tissue=Dmel Male heads Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3085 3085_Dpse_R15s_8_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:15s_8_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R11s_7_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:11s_7_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R7s_4_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:7s_4_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034801.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:801.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034797.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:797.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R16s_1_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:16s_1_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034792.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:792.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R15s_7_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:15s_7_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R31s_8_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:31s_8_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034793.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:793.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034795.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:795.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034799.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:799.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034794.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:794.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034798.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:798.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R11s_8_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:11s_8_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034800.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:800.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R16s_2_bowtie_36.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:16s_2_bowtie_36.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R33s_7_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:33s_7_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_Dpse_R33s_8_bowtie_75.sam.gz D.pseudoobscura/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:33s_8_bowtie_75.sam.gz alignment_sam D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3085 3085_SRR034796.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-Male-heads:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3085:796.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=D.pseudoobscura wild-type#Tissue=Dpse Male heads Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3086 3086_SRR037511.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:11.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R42s_8_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_8_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R21s_3_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_3_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037508.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:08.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R7s_6_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:7s_6_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037517.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:17.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037515.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:15.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037514.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:14.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R42s_7_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_7_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037509.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:09.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037512.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:12.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R21s_5_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_5_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R21s_6_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_6_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R42s_6_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_6_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037518.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:18.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037513.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:13.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R42s_5_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:42s_5_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037516.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:16.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R21s_1_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_1_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R21s_4_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_4_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_Dmoj_R21s_2_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:21s_2_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3086 3086_SRR037510.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmojavensis#Tissue=Dmoj-Male-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3086:10.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmojavensis#Tissue=Dmoj Male heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037506.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:506.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R7s_5_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:7s_5_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037497.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:497.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R20s_3_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_3_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R42s_4_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_4_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R20s_5_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_5_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R20s_1_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_1_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037501.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:501.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R42s_1_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_1_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037498.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:498.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R20s_4_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_4_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037507.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:507.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037502.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:502.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R20s_2_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_2_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037505.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:505.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037503.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:503.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037500.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:500.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037504.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:504.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R42s_3_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_3_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R20s_6_bowtie_36.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:20s_6_bowtie_36.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_Dmoj_R42s_2_bowtie_75.sam.gz D.mojavensis/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:42s_2_bowtie_75.sam.gz alignment_sam D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3087 3087_SRR037499.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmojavensis#Tissue=Dmoj-Female-heads:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3087:499.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmojavensis#Tissue=Dmoj Female heads Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3089 3089_SRR031767.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_SRR074430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_100611_600FPAAXX_CG10128_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:100611_600FPAAXX_CG10128_2_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_091022_432AVAAXX_CG10128_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:091022_432AVAAXX_CG10128_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_090610_4277KAAXX_CG10128_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:610_4277KAAXX_CG10128_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_091110_42PFPAAXX_CG10128_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:091110_42PFPAAXX_CG10128_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_090508_427C7AAXX_CG10128_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:508_427C7AAXX_CG10128_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_SRR074432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_SRR031766.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3089:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3089 3089_SRR074431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3089:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10128-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_SRR074546.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_SRR031733.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_SRR074545.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_SRR031732.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_100611_600FPAAXX_CG9373_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:100611_600FPAAXX_CG9373_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_091002_42P86AAXX_CG9373_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:091002_42P86AAXX_CG9373_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_SRR074544.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_090512_4277EAAXX_CG9373_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_090311_30WEDAAXX_CG9373_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3090:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3090 3090_100611_600FPAAXX_CG9373_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3090:100611_600FPAAXX_CG9373_2_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9373-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_SRR074537.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_100520_600A7AAXX_CG8781_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:520_600A7AAXX_CG8781_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_100409_600BLAAXX_CG8781_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:409_600BLAAXX_CG8781_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_100520_600A7AAXX_CG8781_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:520_600A7AAXX_CG8781_2_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_SRR074534.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_100409_600BLAAXX_CG8781_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:409_600BLAAXX_CG8781_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_SRR074535.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3091:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3091 3091_SRR074536.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3091:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8781-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3092 3092_100520_600A7AAXX_CG8636_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:520_600A7AAXX_CG8636_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3092 3092_SRR074531.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3092.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3092 3092_100408_600A5AAXX_CG8636_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:408_600A5AAXX_CG8636_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3092 3092_SRR074530.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:30.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3092 3092_100408_600A5AAXX_CG8636_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3092.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3092 3092_SRR074529.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3092:29.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8636-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_090508_427C7AAXX_CG7437_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:508_427C7AAXX_CG7437_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_SRR031770.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_091022_432AVAAXX_CG7437_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:022_432AVAAXX_CG7437_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_SRR031771.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_SRR074521.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_091110_42PFPAAXX_CG7437_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:110_42PFPAAXX_CG7437_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_SRR074522.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3093:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3093 3093_090610_4277KAAXX_CG7437_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3093:610_4277KAAXX_CG7437_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7437-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3094 3094_100331_61F5NAAXX_CG6779_1_s_1_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3094.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3094 3094_100331_61F5NAAXX_CG6779_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3094:331_61F5NAAXX_CG6779_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3094 3094_100420_61046AAXX_CG6779_2_s_4_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3094.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3094 3094_100420_61046AAXX_CG6779_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3094:420_61046AAXX_CG6779_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6779-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_100429_600CAAAXX_CG6227_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3095.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_100429_600CAAAXX_CG6227_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:29_600CAAAXX_CG6227_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_100430_6103YAAXX_CG6227_1_s_7_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:100430_6103YAAXX_CG6227_1_s_7_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_SRR074516.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3095:SRR074516.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_SRR074515.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:SRR074515.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_100429_600CAAAXX_CG6227_1_s_2_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:100429_600CAAAXX_CG6227_1_s_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_100429_600CAAAXX_CG6227_2_s_3_sequence.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3095:100429_600CAAAXX_CG6227_2_s_3_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3095 3095_100430_6103YAAXX_CG6227_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3095:30_6103YAAXX_CG6227_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6227-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_SRR031751.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:31751.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_SRR074505.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_090407_3138TAAXX_CG5655_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:090407_3138TAAXX_CG5655_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_100730_61RPDAAXX_CG5655_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:100730_61RPDAAXX_CG5655_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_SRR031750.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:31750.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_091118_42W4VAAXX_CG5655_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:1118_42W4VAAXX_CG5655_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_SRR074506.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3096.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_090527_4277RAAXX_CG5655_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:090527_4277RAAXX_CG5655_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_090925_42PG4AAXX_CG5655_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:0925_42PG4AAXX_CG5655_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_SRR074504.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3096:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_SRR074421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3096:74421.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3096 3096_100730_61RPDAAXX_CG5655_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3096.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5655-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3097 3097_100331_61F5NAAXX_CG33106_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3097.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3097 3097_100323_61F6BAAXX_CG33106_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3097.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3097 3097_SRR074479.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3097.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3097 3097_SRR074475.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3097.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG33106-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3098 3098_100520_600A7AAXX_CG32423_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:520_600A7AAXX_CG32423_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3098 3098_100409_600BLAAXX_CG32423_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3098.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3098 3098_SRR074478.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3098.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3098 3098_SRR074477.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3098 3098_100409_600BLAAXX_CG32423_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:409_600BLAAXX_CG32423_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3098 3098_SRR074476.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3098:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG32423-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3099 3099_090407_3138TAAXX_CG17838_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:407_3138TAAXX_CG17838_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3099 3099_090925_42PG4AAXX_CG17838_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3099.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3099 3099_SRR031741.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3099 3099_SRR031740.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3099 3099_SRR074462.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3099.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3099 3099_090527_4277RAAXX_CG17838_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3099:527_4277RAAXX_CG17838_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17838-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3100 3100_SRR074445.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3100.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3100 3100_SRR074446.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3100.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3100 3100_100408_600A5AAXX_CG1101_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3100.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3100 3100_100408_600A5AAXX_CG1101_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3100.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1101-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3101 3101_SRR031754.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3101 3101_SRR074433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3101.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3101 3101_090414_313ATAAXX_CG10203_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:414_313ATAAXX_CG10203_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3101 3101_SRR031755.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3101 3101_090925_42PG4AAXX_CG10203_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3101.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3101 3101_090601_4277DAAXX_CG10203_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3101:601_4277DAAXX_CG10203_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10203-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3102 3102_SRR074532.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3102.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3102 3102_100409_600BLAAXX_CG8749_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3102.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3102 3102_100409_600BLAAXX_CG8749_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3102.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3102 3102_SRR074533.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3102.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8749-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_090508_427C7AAXX_CG5821_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:508_427C7AAXX_CG5821_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_091118_42W4VAAXX_CG5821_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:118_42W4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_SRR074508.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_090610_4277KAAXX_CG5821_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:610_4277KAAXX_CG5821_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_SRR031775.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_SRR031774.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3103:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_091022_432AVAAXX_CG5821_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:022_432A.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3103 3103_SRR074507.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3103:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5821-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3104 3104_SRR074498.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3104.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3104 3104_100323_61F6BAAXX_CG5170_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3104.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3104 3104_100323_61F6BAAXX_CG5170_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3104.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3104 3104_SRR074497.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3104.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5170-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_100611_600FPAAXX_CG4602_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:100611_600FPAAXX_CG4602_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_090407_3138TAAXX_CG4602_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:407_3138TAAXX_CG4602_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_SRR031748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_090925_42PG4AAXX_CG4602_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:090925_42PG4AAXX_CG4602_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_SRR074488.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_090527_4277RAAXX_CG4602_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:527_4277RAAXX_CG4602_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_SRR074487.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3105:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3105 3105_SRR031749.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3105:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4602-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3106 3106_100429_600CAAAXX_CG6841_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3106.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3106 3106_100429_600CAAAXX_CG6841_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3106.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3106 3106_SRR074518.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3106.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3106 3106_SRR074517.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3106.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6841-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3107 3107_100430_6103YAAXX_CG6203_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3107.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3107 3107_SRR074492.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3107.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3107 3107_100323_61F6BAAXX_CG6203_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3107.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3107 3107_SRR074513.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3107.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6203-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3108 3108_100420_61046AAXX_CG5422_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:420_61046.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3108 3108_SRR074422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3108 3108_SRR074499.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3108.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3108 3108_100420_61046AAXX_CG5422_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3108.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3108 3108_100520_600A7AAXX_CG5422_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:520_600A7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3108 3108_SRR074423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3108:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5422-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_SRR074539.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_101004_61RP2AAXX_CG8912_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:1004_61RP2AAXX_CG8912_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_100520_61DAYAAXX_CG8912_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:0520_61DAYAAXX_CG8912_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_101004_61RP2AAXX_CG8912_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:1004_61RP2AAXX_CG8912_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_SRR074540.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:40.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_SRR074542.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_SRR074538.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_SRR074541.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_100520_61DAYAAXX_CG8912_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:0520_61DAYAAXX_CG8912_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_100323_61F6BAAXX_CG8912_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3109:0323_61F6BAAXX_CG8912_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_100323_61F6BAAXX_CG8912_2_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:0323_61F6BAAXX_CG8912_2_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3109 3109_SRR074543.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3109:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8912-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3110 3110_100423_600A6AAXX_CG8241_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3110.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3110 3110_100423_600A6AAXX_CG8241_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3110.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3110 3110_SRR074527.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3110.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3110 3110_SRR074528.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3110.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8241-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3111 3111_SRR031742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3111 3111_SRR031743.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3111 3111_090527_4277RAAXX_CG16901_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:527_4277RAAXX_CG16901_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3111 3111_090925_42PG4AAXX_CG16901_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3111.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3111 3111_SRR074459.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3111.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3111 3111_090407_3138TAAXX_CG16901_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3111:407_3138TAAXX_CG16901_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16901-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_090925_42PG4AAXX_CG13425_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3112.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_090407_3138TAAXX_CG13425_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:090407_3138TAAXX_CG13425_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_100730_61RPDAAXX_CG13425_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:100730_61RPDAAXX_CG13425_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_090527_4277RAAXX_CG13425_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:090527_4277RAAXX_CG13425_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_SRR031744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:31744.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_SRR074420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:74420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_100730_61RPDAAXX_CG13425_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3112.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_SRR074451.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3112.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_SRR031745.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3112:31745.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3112 3112_SRR074452.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3112.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG13425-RNAi#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_100520_600A7AAXX_CG10279_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:520_600A7AAXX_CG10279_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_SRR074434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_100520_600A7AAXX_CG10279_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:520_600A7AAXX_CG10279_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_SRR074437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_SRR074438.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_SRR074435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_100430_6103YAAXX_CG10279_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:430_6103YAAXX_CG10279_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_100429_600CAAAXX_CG10279_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:429_600CAAAXX_CG10279_2_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_100429_600CAAAXX_CG10279_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3113:429_600CAAAXX_CG10279_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3113 3113_SRR074436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3113:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10279-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3114 3114_100408_600A5AAXX_CG6049_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3114.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3114 3114_100408_600A5AAXX_CG6049_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3114.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3114 3114_SRR074511.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3114.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3114 3114_SRR074512.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3114.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6049-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3115 3115_SRR074481.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3115.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3115 3115_SRR074482.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3115.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3115 3115_100423_600A6AAXX_CG3312_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3115.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3115 3115_100423_600A6AAXX_CG3312_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3115.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3312-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3116 3116_100331_61F5NAAXX_CG31716_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3116.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3116 3116_SRR074480.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3116.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3116 3116_SRR074474.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3116.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3116 3116_100323_61F6BAAXX_CG31716_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3116.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31716-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_SRR031747.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_SRR031746.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_090527_4277RAAXX_CG30122_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:527_4277RAAXX_CG30122_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_090925_42PG4AAXX_CG30122_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:090925_42PG4AAXX_CG30122_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_100611_600FPAAXX_CG30122_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:100611_600FPAAXX_CG30122_2_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_SRR074471.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_090407_3138TAAXX_CG30122_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3117:407_3138TAAXX_CG30122_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3117 3117_SRR074470.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3117:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG30122-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3118 3118_100409_600BLAAXX_CG11266_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3118.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3118 3118_100409_600BLAAXX_CG11266_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3118.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3118 3118_SRR074447.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3118.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3118 3118_SRR074448.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3118.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG11266-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3119 3119_100430_6103YAAXX_CG8019_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3119.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3119 3119_100429_600CAAAXX_CG8019_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3119.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3119 3119_SRR074525.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3119.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3119 3119_SRR074526.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3119.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8019-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_SRR031764.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_091110_42PFPAAXX_CG7971_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:110_42PFPAAXX_CG7971_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_SRR074523.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_090504_427EDAAXX_CG7971_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:504_427EDAAXX_CG7971_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_091022_432AVAAXX_CG7971_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:022_432AVAAXX_CG7971_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_090610_4277KAAXX_CG7971_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:610_4277KAAXX_CG7971_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_SRR074524.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3120:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3120 3120_SRR031765.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3120:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7971-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3121 3121_100430_6103YAAXX_CG4816_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3121.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3121 3121_SRR074491.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3121.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3121 3121_100323_61F6BAAXX_CG4816_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3121.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3121 3121_SRR074514.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3121.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4816-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3122 3122_SRR074484.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3122.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3122 3122_SRR074483.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3122.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3122 3122_100430_6103YAAXX_CG3584_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3122.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3122 3122_100430_6103YAAXX_CG3584_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3122.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3584-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3123 3123_100429_600CAAAXX_CG1646_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3123.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3123 3123_SRR074455.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3123.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3123 3123_100423_600A6AAXX_CG1646_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3123.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3123 3123_SRR074456.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3123.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1646-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_SRR074443.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_090601_4277DAAXX_CG10851_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:601_4277DAAXX_CG10851_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_091002_42P86AAXX_CG10851_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:091002_42P86AAXX_CG10851_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_100611_600FPAAXX_CG10851_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:100611_600FPAAXX_CG10851_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_SRR031761.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_090420_313YUAAXX_CG10851_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:420_313YUAAXX_CG10851_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_SRR074444.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3124:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3124 3124_SRR031760.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3124:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10851-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_091110_42PFPAAXX_CG5099_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:110_42PFPAAXX_CG5099_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_SRR031735.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_SRR074496.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_SRR031734.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_090311_30WEDAAXX_CG5099_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_091002_42P86AAXX_CG5099_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:002_42P86AAXX_CG5099_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_090512_4277EAAXX_CG5099_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3125:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3125 3125_SRR074495.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3125:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5099-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3126 3126_SRR074490.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3126.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3126 3126_SRR074489.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3126.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3126 3126_100423_600A6AAXX_CG4760_2_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3126.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3126 3126_100420_61046AAXX_CG4760_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3126.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4760-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_SRR074463.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3127.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_091218_42WM6AAXX_CG18350_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3127.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_100520_61DAYAAXX_CG18350_2_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:520_61DAYAAXX_CG18350_2_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_SRR074464.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_SRR074465.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_100420_61046AAXX_CG18350_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:420_61046AAXX_CG18350_2_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_SRR074466.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3127 3127_100520_600A7AAXX_CG18350_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3127:520_600A7AAXX_CG18350_2_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18350-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3128 3128_100408_600A5AAXX_CG16788_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3128.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3128 3128_100408_600A5AAXX_CG16788_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3128.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3128 3128_SRR074458.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3128.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3128 3128_SRR074457.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3128.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG16788-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_SRR031772.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_091118_42W4VAAXX_CG1559_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:118_42W4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_091022_432AVAAXX_CG1559_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:022_432A.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_SRR031773.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_090508_427C7AAXX_CG1559_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:508_427C7AAXX_CG1559_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_SRR074454.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_SRR074453.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3129:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3129 3129_090610_4277KAAXX_CG1559_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3129:610_4277KAAXX_CG1559_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1559-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3130 3130_100420_61046AAXX_CG10377_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3130.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3130 3130_100331_61F5NAAXX_CG10377_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3130.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3130 3130_SRR074442.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3130.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3130 3130_SRR074441.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3130.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10377-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3131 3131_SRR074547.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3131.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3131 3131_100331_61F5NAAXX_CG9412_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3131.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3131 3131_SRR074548.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3131.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3131 3131_100331_61F5NAAXX_CG9412_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3131.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9412-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_090311_30WEDAAXX_CG6946_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_091118_42W4VAAXX_CG6946_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:118_42W4VAAXX_CG6946_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_SRR031731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_090512_4277EAAXX_CG6946_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_091002_42P86AAXX_CG6946_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:002_42P86AAXX_CG6946_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_SRR031730.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3132:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_SRR074520.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:20.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3132 3132_SRR074519.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3132:19.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG6946-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3133 3133_090925_42PG4AAXX_CG1987_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3133.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3133 3133_090527_4277RAAXX_CG1987_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:527_4277RAAXX_CG1987_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3133 3133_SRR031753.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3133 3133_SRR074469.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3133.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3133 3133_090414_313ATAAXX_CG1987_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:414_313ATAAXX_CG1987_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3133 3133_SRR031752.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3133:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG1987-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_SRR031736.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_090512_4277EAAXX_CG9983_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_SRR074550.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_090311_30WEDAAXX_CG9983_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_091002_42P86AAXX_CG9983_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:002_42P86AAXX_CG9983_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_SRR031737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3134:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_091110_42PFPAAXX_CG9983_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:110_42PFPAAXX_CG9983_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3134 3134_SRR074549.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3134:49.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG9983-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_SRR074502.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_090414_313ATAAXX_CG5442_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:414_313ATAAXX_CG5442_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_SRR074501.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_091002_42P86AAXX_CG5442_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:091002_42P86AAXX_CG5442_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_090601_4277DAAXX_CG5442_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:601_4277DAAXX_CG5442_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_100611_600FPAAXX_CG5442_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:100611_600FPAAXX_CG5442_2_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_SRR074500.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3135:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3135 3135_SRR074503.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3135:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5442-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_SRR031769.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_SRR031768.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_090508_427C7AAXX_CG31000_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:508_427C7AAXX_CG31000_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_091022_432AVAAXX_CG31000_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:022_432AVAAXX_CG31000_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_SRR074472.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_091110_42PFPAAXX_CG31000_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:110_42PFPAAXX_CG31000_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_090610_4277KAAXX_CG31000_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3136:610_4277KAAXX_CG31000_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3136 3136_SRR074473.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3136:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG31000-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_090601_4277DAAXX_CG17136_1_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:601_4277DAAXX_CG17136_1_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_SRR074460.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_SRR031757.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_091110_42PFPAAXX_CG17136_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:110_42PFPAAXX_CG17136_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_SRR074461.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_SRR031756.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_090414_313ATAAXX_CG17136_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3137:414_313ATAAXX_CG17136_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3137 3137_091002_42P86AAXX_CG17136_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3137:002_42P86AAXX_CG17136_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG17136-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_SRR074429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3138.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_100430_6103YAAXX_Untreated_32_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3138.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_091218_42WM6AAXX_Untreated_31_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3138.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_090512_4277EAAXX_Untreated_6_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_SRR031729.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_SRR074428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3138.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_SRR031728.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3138 3138_090311_30WEDAAXX_Untreated_6_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3138:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3139 3139_SRR074494.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3139.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3139 3139_100331_61F5NAAXX_CG4878_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3139.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3139 3139_100331_61F5NAAXX_CG4878_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3139.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3139 3139_SRR074493.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3139.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4878-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3140 3140_SRR074485.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3140.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3140 3140_100423_600A6AAXX_CG4262_2_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3140.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3140 3140_100423_600A6AAXX_CG4262_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3140.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3140 3140_SRR074486.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3140.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG4262-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_SRR031763.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_091118_42W4VAAXX_CG18426_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:118_42W4VAAXX_CG18426_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_090610_4277KAAXX_CG18426_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:610_4277KAAXX_CG18426_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_SRR074467.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_SRR074468.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_091022_432AVAAXX_CG18426_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3141:022_432AVAAXX_CG18426_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_090504_427EDAAXX_CG18426_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:504_427EDAAXX_CG18426_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3141 3141_SRR031762.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3141:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG18426-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_091110_42PFPAAXX_CG12749_s_3_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:110_42PFPAAXX_CG12749_s_3.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_SRR031738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_090512_4277EAAXX_CG12749_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:512_4277E.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_SRR074450.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_SRR074449.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:49.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_091002_42P86AAXX_CG12749_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3142:002_42P86AAXX_CG12749_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_SRR031739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3142 3142_090311_30WEDAAXX_CG12749_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3142:311_30WED.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12749-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_SRR074426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:74426.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_100730_61RPDAAXX_CG7878_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:100730_61RPDAAXX_CG7878_2_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_100730_61RPDAAXX_CG7878_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:100730_61RPDAAXX_CG7878_1_s_1.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_SRR031782.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:31782.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_SRR031783.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:31783.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_SRR074427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:74427.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_090512_4277EAAXX_CG7878_1_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:090512_4277EAAXX_CG7878_1_s_2.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_SRR031781.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:31781.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_090624_42ENMAAXX_CG7878_1_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3143:090624_42ENMAAXX_CG7878_1_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3143 3143_090624_42ENMAAXX_CG7878_2_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3143:090624_42ENMAAXX_CG7878_2_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG7878-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_SRR031776.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_090624_42ENMAAXX_CG5836_1_s_4_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:624_42ENMAAXX_CG5836_1_s_4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_SRR074509.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:09.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_SRR031777.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_091022_432AVAAXX_CG5836_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:022_432A.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_SRR074510.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_091118_42W4VAAXX_CG5836_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3144:118_42W4.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3144 3144_090508_427C7AAXX_CG5836_1_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3144:508_427C7AAXX_CG5836_1_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG5836-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_100730_61RPDAAXX_CG3249_2_s_6_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:100730_61RPDAAXX_CG3249_2_s_6.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_SRR074425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:74425.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_090508_427C7AAXX_CG3249_1_s_8_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:090508_427C7AAXX_CG3249_1_s_8.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_100730_61RPDAAXX_CG3249_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:100730_61RPDAAXX_CG3249_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_SRR031779.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:31779.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_090624_42ENMAAXX_CG3249_1_s_5_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:090624_42ENMAAXX_CG3249_1_s_5.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_SRR031778.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:31778.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_090624_42ENMAAXX_CG3249_2_s_7_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:090624_42ENMAAXX_CG3249_2_s_7.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_SRR074424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3145:74424.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3145 3145_SRR031780.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3145:31780.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG3249-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3146 3146_100420_61046AAXX_CG10328_1_s_1_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3146.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3146 3146_100420_61046AAXX_CG10328_2_s_2_sequence.txt_unique.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3146.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3146 3146_SRR074440.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3146.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3146 3146_SRR074439.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3146.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG10328-RNAi#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3147 3147_Snyder_DAF12_GFP_L3_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DAF-12:Developmental-Stage=Larvae-L3-stage#Strain=OP167#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3147:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DAF-12 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP167#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3147 3147_Snyder_DAF12_Input_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DAF-12:Developmental-Stage=Larvae-L3-stage#Strain=OP167#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3147:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DAF-12 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP167#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3147 3147_Snyder_DAF12_Input_L3_rep1.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq DAF-12:Developmental-Stage=Larvae-L3-stage#Strain=OP167#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3147.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq DAF-12 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP167#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -6464,15 +6464,15 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3151 3151_AB2621_H3K79ME3361576_N2_MXEMB_1_EE4+2_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me3:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3151:1_EE4+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K79me3 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3151 3151_AB2621_H3K79ME3361576_N2_MXEMB_2_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me3:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3151:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K79me3 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3151 3151_AB2621_H3K79ME3361576_N2_MXEMB_2_19529401_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K79me3:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3151.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K79me3 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3153 3153_AB46540_NIGG_N2_MXEMB_1_A_294254_NIgG_650_550_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_1_A+2_A_EE4_peaks.gff3.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153:1_A+2_A_EE4.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_1_A_MA2Cscore.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_peaks.gff3.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153:2_A_EE4.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_352112_NIgG_660_570_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_1_A_294254_NIgG_650_550_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_MA2Cscore.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3153.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_1_A_peaks.gff3.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153:1_A.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_352112_NIgG_660_570_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#Strain=Ab-AB46540-NIgG-JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:AB46540 NIgG:JL:1#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_1_A_294254_NIgG_650_550_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_1_A+2_A_EE4_peaks.gff3.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153:1_A+2_A_EE4.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_1_A_MA2Cscore.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_peaks.gff3.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153:2_A_EE4.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_352112_NIgG_660_570_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_1_A_294254_NIgG_650_550_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_MA2Cscore.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3153.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_1_A_peaks.gff3.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3153:1_A.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3153 3153_AB46540_NIGG_N2_MXEMB_2_A_EE4_352112_NIgG_660_570_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair IgG-control:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3153.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip IgG control Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 3154 3154_23952702_532_pair.txt.gz C.elegans/Non-TF-Chromatin-binding-factor/RNA-tiling-array/raw-arrayfile_pair Nucleosome:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3154:27.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor RNA-tiling-array Nucleosome Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3154 3154_23952902_532_pair.txt.gz C.elegans/Non-TF-Chromatin-binding-factor/RNA-tiling-array/raw-arrayfile_pair Nucleosome:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3154:29.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor RNA-tiling-array Nucleosome Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3154 3154_23953002_532_pair.txt.gz C.elegans/Non-TF-Chromatin-binding-factor/RNA-tiling-array/raw-arrayfile_pair Nucleosome:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3154:30.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor RNA-tiling-array Nucleosome Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites @@ -6627,14 +6627,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3166 3166_SDQ4051_LEM2_N2_MXEMB_1_A_EE6_peaks.gff.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LEM-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3166.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip LEM-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3166 3166_SDQ4051_LEM2_N2_MXEMB_1_A_EE6_MA2Cscore.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LEM-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3166.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip LEM-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3166 3166_SDQ4051_LEM2_N2_MXEMB_1_A_EE6_352674_LEM2_700_620_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair LEM-2:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3166.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip LEM-2 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3170 3170_pirrota_212_A8_Input.62.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3170:pirrota_212_A8_Input.62.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_66.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170:66.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_repset.3211342.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170:repset.3211342.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_26.pirrota_170_ART5_H3K36me1_HD.26.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3170:26.pirrota_170_ART5_H3K36me1_HD.2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_26.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170:26.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_pirrota_216_A8_H3K36me1.66.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3170:pirrota_216_A8_H3K36me1.6.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_10.pirrota_142_A3_Input_HD.10.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3170:10.pirrota_142_A3_Input_HD.10.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3170 3170_repset.3211342.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_pirrota_212_A8_Input.62.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3170:pirrota_212_A8_Input.62.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_66.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170:66.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_repset.3211342.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170:repset.3211342.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_26.pirrota_170_ART5_H3K36me1_HD.26.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3170:26.pirrota_170_ART5_H3K36me1_HD.2.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_26.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170:26.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_pirrota_216_A8_H3K36me1.66.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3170:pirrota_216_A8_H3K36me1.6.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_10.pirrota_142_A3_Input_HD.10.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3170:10.pirrota_142_A3_Input_HD.10.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3170 3170_repset.3211342.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3170.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K36me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3171 3171_HK00013_H3K27ME31E7_N2_EEMB_2_OID22177_382481_Area1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K27me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3171.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K27me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3171 3171_HK00013_H3K27ME31E7_N2_EEMB_2_OID22177_DS_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3171.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K27me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3171 3171_HK00013_H3K27ME31E7_N2_EEMB_1_OID21380+2_OID22177_DS_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3171:1_OID21380+2_OID22177_DS.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K27me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -6644,22 +6644,31 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3171 3171_HK00013_H3K27ME31E7_N2_EEMB_2_OID22177_382481_Area1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K27me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3171.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K27me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3171 3171_HK00013_H3K27ME31E7_N2_EEMB_2_OID22177_DS_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3171:2_OID22177_DS.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K27me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3171 3171_HK00013_H3K27ME31E7_N2_EEMB_1_OID21380_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3171.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K27me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3172 3172_emb-0hr-ref-v2-258_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:258_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_534DMM0271-20100415-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3172:71-20100415.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_534DMM0258-20100316-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3172:58-20100316.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_emb-0hr-ref-v2-260_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:260_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_emb-0hr-ref-v2-271_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:271_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_534DMM0260-20100316-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3172:60-20100316.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_emb-0hr-ref-v2_tars_maxgap30_minrun100_thresh6.75.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3172 3172_emb-0hr-ref-v2_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_emb-AVE-226_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:226_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_534DMM0226-20100316-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3173:6-20100316.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_534DMM0229-20100127-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3173:9-20100127.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_emb-AVE-229_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:229_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_emb-AVE-228_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:228_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_emb-AVE_tars_maxgap30_minrun100_thresh8.17.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_534DMM0228-20091022-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3173:8-20091022.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3173 3173_emb-AVE_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_emb-0hr-ref-v2-258_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:258_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_534DMM0271-20100415-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3172:71-20100415.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_534DMM0258-20100316-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3172:58-20100316.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_emb-0hr-ref-v2-260_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:260_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_emb-0hr-ref-v2-271_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:271_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_534DMM0260-20100316-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3172:60-20100316.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_emb-0hr-ref-v2_tars_maxgap30_minrun100_thresh6.75.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3172 3172_emb-0hr-ref-v2_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2#Tissue=Reference-(early-embryo)#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3172:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2#Tissue=Reference (early embryo)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_emb-AVE-226_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:226_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_534DMM0226-20100316-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3173:6-20100316.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_534DMM0229-20100127-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3173:9-20100127.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_emb-AVE-229_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:229_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_emb-AVE-228_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:228_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_emb-AVE_tars_maxgap30_minrun100_thresh8.17.gff3.gz C.elegans/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173.gff3.gz gene-model_gff3 C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_534DMM0228-20091022-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3173:8-20091022.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3173 3173_emb-AVE_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3173:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=NC1750#Tissue=Embryo-AVE#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_1_OID27924_18613601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3178.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_2_OID29991_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3178.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_1_OID27924+2_OID29991_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3178:1_OID27924+2_OID29991.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_2_OID29991_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3178:2_OID29991.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_2_OID29991_19965201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3178.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_1_OID27924_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3178:1_OID27924.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_1_OID27924_18613601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3178.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_2_OID29991_19965201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3178.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3178 3178_AM39379_H3K36AC29108001_N2_EEMB_1_OID27924_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3178.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3179 3179_UP07448_H3K27ME124439_N2_EEMB_2_OID27924_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3179.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K27me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3179 3179_UP07448_H3K27ME124439_N2_EEMB_1_OID26641+2_OID27924_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3179:1_OID26641+2_OID27924.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K27me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3179 3179_UP07448_H3K27ME124439_N2_EEMB_2_OID27924_18615401_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K27me1:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3179.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K27me1 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement @@ -6698,18 +6707,18 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3182 3182_MP07329_H4K16ACDAM1612187_N2_EEMB_2_OID27095_18147501_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K16ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3182.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K16ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3190 3190_V007.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3190.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Female heads Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3190 3190_SRR069505.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3190.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Female heads Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3193 3193_V027.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3193.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3193 3193_V027.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3193.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3195 3195_V013.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3195.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Female heads Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3195 3195_SRR069509.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-Female#Strain=Canton-S#Tissue=Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3195.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=Canton S#Tissue=Female heads Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_20010201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_20010501_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3196.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_20010201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311+2_OID30311_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196:1_OID30311+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_20010501_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_20010201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_20010501_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3196.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311_20010201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_1_OID30311+2_OID30311_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3196:1_OID30311+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3196 3196_DISN147_H4K20ME1001_N2_LTEMB_2_OID30311_20010501_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3196.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3197 3197_WA30534819_H3K4ME3_N2_EEMB_2_OID22177_362768_Area1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3197.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3197 3197_WA30534819_H3K4ME3_N2_EEMB_3_OID26226_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3197:3_OID26226.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3197 3197_WA30534819_H3K4ME3_N2_EEMB_2_OID22177_362768_Area1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3197.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -6746,9 +6755,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3200 3200_WA30634849_H3K27AC_N2_EEMB_1_OID25717_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3200:1_OID25717.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K27ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3200 3200_WA30634849_H3K27AC_N2_EEMB_2_OID27095_18145401_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K27ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3200.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K27ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3200 3200_WA30634849_H3K27AC_N2_EEMB_2_OID27095_18145401_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K27ac:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3200.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K27ac Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3201 3201_DM57.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_3201:7.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -3201 3201_DM58.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_3201:8.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation -3201 3201_cl8_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_3201.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +3201 3201_DM57.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_3201:7.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +3201 3201_DM58.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_3201:8.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +3201 3201_cl8_cnv.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_3201.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation 3202 3202_AB2886_H3K79ME1361912_N2_MXEMB_1_EE4_350414_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K79me1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3202.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K79me1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3202 3202_AB2886_H3K79ME1361912_N2_MXEMB_2_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3202:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K79me1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3202 3202_AB2886_H3K79ME1361912_N2_MXEMB_1_EE4_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3202:1_EE4.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K79me1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -6785,10 +6794,10 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3205 3205_ab9048_H3K36me1206009_N2-L3_2_19974301_IN_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3205.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3205 3205_ab9048_H3K36me1206009_N2-L3_2_19974301_IP_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3205.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3205 3205_AB9048_H3K36ME1206009_N2_L3_2_ME6_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3205.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3206 3206_AB1791_H3_N2_L3_1_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3206.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3206 3206_AB1791-H3_N2_L3_1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3206.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3206 3206_AB1791-H3_N2_L3_1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3206.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3206 3206_AB1791_H3_N2_L3_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3206.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3206 3206_AB1791_H3_N2_L3_1_peaks.gff3.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3206.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3206 3206_AB1791-H3_N2_L3_1_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3206.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3206 3206_AB1791-H3_N2_L3_1_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3206.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3206 3206_AB1791_H3_N2_L3_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3206.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3217 3217_Snyder_W03F9.2_GFP_YA_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle W03F9.2:Developmental-Stage=L4-Young-Adult-stage-larvae#Strain=OP215#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3217:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq W03F9.2 L4-Young Adult stage larvae Developmental-Stage=L4-Young Adult stage larvae#Strain=OP215#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3217 3217_Snyder_W03F9.2_GFP_YA_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 W03F9.2:Developmental-Stage=L4-Young-Adult-stage-larvae#Strain=OP215#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3217.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq W03F9.2 L4-Young Adult stage larvae Developmental-Stage=L4-Young Adult stage larvae#Strain=OP215#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3217 3217_Snyder_W03F9.2_GFP_YA_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle W03F9.2:Developmental-Stage=L4-Young-Adult-stage-larvae#Strain=OP215#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3217:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq W03F9.2 L4-Young Adult stage larvae Developmental-Stage=L4-Young Adult stage larvae#Strain=OP215#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -6964,26 +6973,26 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3250 3250_Dro5_AS_Dm_emb_6h_RWP+_C05_B2_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Embryos-4-6-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-2:Biotin:Dmel_r5.32:modENCODE_3250:3250_Dro5_AS_Dm_emb_6h_RWP+_C05.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 4-6 hr Developmental-Stage=Embryos 4-6 hr#Strain=Y cn bw sp Rep-2 Dmel_r5.32 Celniker, S. RNA expression profiling 3250 3250_Dro5_AS_Dm_emb_6h_RWP+_C04_B3_T1.cel.gz D.melanogaster/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=Embryos-4-6-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-3:Biotin:Dmel_r5.32:modENCODE_3250:3250_Dro5_AS_Dm_emb_6h_RWP+_C04.CEL.gz raw-arrayfile_CEL D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 4-6 hr Developmental-Stage=Embryos 4-6 hr#Strain=Y cn bw sp Rep-3 Dmel_r5.32 Celniker, S. RNA expression profiling 3250 3250_Dro5_AS_Dm_emb_6h_RWP+_7bp_800.gff.gz D.melanogaster/mRNA/RNA-tiling-array/gene-model_gff3 total-RNA:Developmental-Stage=Embryos-4-6-hr#Strain=Y-cn-bw-sp:RNA-tiling-array:Rep-1::Dmel_r5.32:modENCODE_3250.gff3.gz gene-model_gff3 D. melanogaster mRNA RNA-tiling-array total-RNA Embryos 4-6 hr Developmental-Stage=Embryos 4-6 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. RNA expression profiling -3251 3251_DM52_PS54_IN2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_DM50_PS53_IN1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_DM64_PS53_IP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_ON_PolII.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_ON_PolII_53.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251:53.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_ON_PolII_53.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3251:53.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_DM65_PS54_IP2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_ON_PolII.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3251:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_ON_PolII_54.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251:54.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3251 3251_ON_PolII_54.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 pol2:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3251:54.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq pol2 Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_SG_ORC.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_SG_ORC.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3253:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_DM108_PS49_IN2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_3253:08_PS49_IN.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_DM110_PS49_IP2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_3253:10_PS49_IP.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_SG_ORC_49.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:49.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_DM107_PS48_IP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:7_PS48_IP.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_DM105_PS48_IN1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:5_PS48_IN.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_SG_ORC_48.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:48.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_SG_ORC_48.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3253:48.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3253 3253_SG_ORC_49.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3253:49.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_DM52_PS54_IN2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_DM50_PS53_IN1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_DM64_PS53_IP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_ON_PolII.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_ON_PolII_53.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251:53.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_ON_PolII_53.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3251:53.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_DM65_PS54_IP2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_3251.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_ON_PolII.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3251:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_ON_PolII_54.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3251:54.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3251 3251_ON_PolII_54.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Mixed-Embryos-0-24-hr#devstage=DevStage-Mixed-Embryos-0-24h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3251:54.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Mixed Embryos 0-24 hr Developmental-Stage=Mixed Embryos 0-24 hr#devstage=DevStage:Mixed Embryos 0-24h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_SG_ORC.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_SG_ORC.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3253:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_DM108_PS49_IN2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_3253:08_PS49_IN.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_DM110_PS49_IP2.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_3253:10_PS49_IP.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_SG_ORC_49.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:49.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_DM107_PS48_IP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:7_PS48_IP.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_DM105_PS48_IN1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:5_PS48_IN.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_SG_ORC_48.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3253:48.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_SG_ORC_48.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3253:48.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3253 3253_SG_ORC_49.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=SuUR---Orr-Weaver#Tissue=Salivary-glands#base-pair=36-base-pair#whole-organism=FlyStrain-SuUR---Orr-Weaver-DM-1:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3253:49.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=SuUR - Orr-Weaver#Tissue=Salivary glands#base pair=36 base pair#whole-organism=FlyStrain:SuUR---Orr-Weaver:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication 3254 3254_Snyder_UNC-62_GFP_L2_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 UNC-62:Developmental-Stage=Larvae-L2-stage#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3254:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq UNC-62 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP600#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3254 3254_Snyder_UNC-62_Input_L2_rep2_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq UNC-62:Developmental-Stage=Larvae-L2-stage#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3254.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq UNC-62 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP600#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3254 3254_Snyder_UNC-62_GFP_L2_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle UNC-62:Developmental-Stage=Larvae-L2-stage#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3254:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq UNC-62 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP600#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites @@ -6998,11 +7007,11 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3254 3254_Snyder_UNC-62_GFP_L2_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 UNC-62:Developmental-Stage=Larvae-L2-stage#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3254:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq UNC-62 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP600#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3254 3254_Snyder_UNC-62_GFP_L2_rep2_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq UNC-62:Developmental-Stage=Larvae-L2-stage#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3254.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq UNC-62 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP600#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3254 3254_Snyder_UNC-62_GFP_L2_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle UNC-62:Developmental-Stage=Larvae-L2-stage#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3254:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq UNC-62 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP600#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3263 3263_SRR070292.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3263:92.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3263 3263_SRR070261.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3263:61.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3263 3263_SRR070269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3263:69.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3265 3265_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3265.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3273 3273_SRR070259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3263 3263_SRR070292.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3263:92.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3263 3263_SRR070261.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3263:61.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3263 3263_SRR070269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3263:69.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3265 3265_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3265.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3273 3273_SRR070259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3276 3276_GermlinecontainingAdults_R2_RawCoverage.wig.gz C.elegans/Chromatin-Structure/DNA-seq/coverage-graph_wiggle Nucleosome:Developmental-Stage=Germline-containing-young-adult#Strain=fem-2(b245)#temperature=20-degree-celsius:DNA-seq:Rep-2::Cele_WS220:modENCODE_3276.wig.gz coverage-graph_wiggle C. elegans Chromatin Structure DNA-seq Nucleosome Germline containing Young Adult Developmental-Stage=Germline containing young adult#Strain=fem-2(b245)#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure 3276 3276_GermlinecontainingAdults_R1_RawCoverage.wig.gz C.elegans/Chromatin-Structure/DNA-seq/coverage-graph_wiggle Nucleosome:Developmental-Stage=Germline-containing-young-adult#Strain=fem-2(b245)#temperature=20-degree-celsius:DNA-seq:Rep-1::Cele_WS220:modENCODE_3276:R1_RawCoverage.wig.gz coverage-graph_wiggle C. elegans Chromatin Structure DNA-seq Nucleosome Germline containing Young Adult Developmental-Stage=Germline containing young adult#Strain=fem-2(b245)#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure 3276 3276_GermlinecontainingAdults_NormalizedAveraged.wig.gz C.elegans/Chromatin-Structure/DNA-seq/coverage-graph_wiggle Nucleosome:Developmental-Stage=Germline-containing-young-adult#Strain=fem-2(b245)#temperature=20-degree-celsius:DNA-seq:Rep-1::Cele_WS220:modENCODE_3276:NormalizedAveraged.wig.gz coverage-graph_wiggle C. elegans Chromatin Structure DNA-seq Nucleosome Germline containing Young Adult Developmental-Stage=Germline containing young adult#Strain=fem-2(b245)#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure @@ -7022,30 +7031,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3280 3280_pirrota_437_B3_INPUT.253.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3280:437_B3_INPUT.253.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3280 3280_258.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3280:258.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3280 3280_pirrota_407_B1_CTCF.235.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3280:07_B1_CTCF.235.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_234.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281:234.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_pirrota_208_S12_Input.58.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3281:208_S12_Input.5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_repset.4162228.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_repset.4162228.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281:repset.4162228.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_pirrota_303_S14_Input.148.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3281:303_S14_Input.14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_150.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281:150.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_pirrota_305_S14_CTCF.150.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3281:305_S14_CTCF.150.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3281 3281_pirrota_406_S12_CTCF.234.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3281:406_S12_CTCF.234.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3282 3282_pirrota_1398_Kc5_H2AV-9751.1150.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3282:398_Kc5_H2AV-9751.1150.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_1150.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282:1150.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_1146.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282:1146.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_pirrota_1466_Kc4_H2AV-9751.1146.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3282:466_Kc4_H2AV-9751.1146.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3282:400_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_pirrota_1220_Kc4_Input.904.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3282:220_Kc4_Input.904.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_repset.9702808.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282:repset.9702808.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3282 3282_repset.9702808.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2AV:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2AV Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_pirrota_292_A9_Input.136.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3283:92_A9_Input.136.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_65.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283:65.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_repset.3833936.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283:repset.3833936.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_pirrota_287_A9_H2BK5ac.131.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3283:87_A9_H2BK5ac.131.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_pirrota_215_A8_H2BK5ac.65.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3283:15_A8_H2BK5ac.65.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_repset.3833936.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_131.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283:131.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3283 3283_pirrota_212_A8_Input.62.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3283:12_A8_Input.62.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3281 3281_234.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281:234.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_pirrota_208_S12_Input.58.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3281:208_S12_Input.5.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_repset.4162228.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_repset.4162228.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281:repset.4162228.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_pirrota_303_S14_Input.148.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3281:303_S14_Input.14.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_150.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3281:150.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_pirrota_305_S14_CTCF.150.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3281:305_S14_CTCF.150.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3281 3281_pirrota_406_S12_CTCF.234.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3281:406_S12_CTCF.234.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3282 3282_pirrota_1398_Kc5_H2AV-9751.1150.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3282:398_Kc5_H2AV-9751.1150.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_1150.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282:1150.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_1146.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282:1146.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_pirrota_1466_Kc4_H2AV-9751.1146.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3282:466_Kc4_H2AV-9751.1146.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3282:400_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_pirrota_1220_Kc4_Input.904.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3282:220_Kc4_Input.904.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_repset.9702808.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282:repset.9702808.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3282 3282_repset.9702808.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Av:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3282.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Av Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_pirrota_292_A9_Input.136.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3283:92_A9_Input.136.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_65.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283:65.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_repset.3833936.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283:repset.3833936.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_pirrota_287_A9_H2BK5ac.131.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3283:87_A9_H2BK5ac.131.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_pirrota_215_A8_H2BK5ac.65.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3283:15_A8_H2BK5ac.65.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_repset.3833936.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_131.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3283:131.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3283 3283_pirrota_212_A8_Input.62.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2BK5ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3283:12_A8_Input.62.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2BK5ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3284 3284_1177.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3284:1177.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3284 3284_pirrota_1208_L3-7_Input.939.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Bubi:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3284:208_L3-7_Input.939.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3284 3284_repset.9702640.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Bubi:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3284:repset.9702640.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Bubi Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -7070,30 +7079,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3286 3286_1219.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3286:1219.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3286 3286_1218.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3286:1218.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3286 3286_repset.9703026.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3286:repset.9703026.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_repset.9703027.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_repset.9703027.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287:repset.9703027.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3287:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_pirrota_1496_Kc4_H4K20me(2ndlot).1216.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3287:6_Kc4_H4K20me(2ndlot).1216.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_pirrota_1497_Kc5_H4K20me(2ndlot).1217.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3287:7_Kc5_H4K20me(2ndlot).1217.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_1216.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287:1216.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_1217.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287:1217.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3287 3287_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3287:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_pirrota_1518_CI8(2)_H4K8ac.1250.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3288:8_CI8(2)_H4K8ac.1250.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_repset.9703852.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3288:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3288:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_pirrota_1517_CI8(1)_H4K8ac.1249.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3288:7_CI8(1)_H4K8ac.1249.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_1249.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288:1249.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_1250.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288:1250.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3288 3288_repset.9703852.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288:repset.9703852.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_repset.9703851.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289:repset.9703851.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3289:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_1245.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289:1245.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_1246.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289:1246.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_repset.9703851.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_pirrota_1514_Kc-5_H4K8ac.1246.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3289:4_Kc-5_H4K8ac.1246.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_pirrota_1513_Kc-4_H4K8ac.1245.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3289:3_Kc-4_H4K8ac.1245.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3289 3289_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3289:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_repset.9703027.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_repset.9703027.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287:repset.9703027.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3287:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_pirrota_1496_Kc4_H4K20me(2ndlot).1216.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3287:6_Kc4_H4K20me(2ndlot).1216.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_pirrota_1497_Kc5_H4K20me(2ndlot).1217.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3287:7_Kc5_H4K20me(2ndlot).1217.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_1216.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287:1216.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_1217.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3287:1217.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3287 3287_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3287:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_pirrota_1518_CI8(2)_H4K8ac.1250.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3288:8_CI8(2)_H4K8ac.1250.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_repset.9703852.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_pirrota_478_C18-2_Input(14cyc).289.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3288:8_C18-2_Input(14cyc).289.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_pirrota_477_C18-1_Input(14cyc).288.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3288:7_C18-1_Input(14cyc).288.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_pirrota_1517_CI8(1)_H4K8ac.1249.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3288:7_CI8(1)_H4K8ac.1249.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_1249.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288:1249.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_1250.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288:1250.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3288 3288_repset.9703852.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3288:repset.9703852.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_repset.9703851.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289:repset.9703851.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3289:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_1245.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289:1245.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_1246.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289:1246.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_repset.9703851.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3289.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_pirrota_1514_Kc-5_H4K8ac.1246.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3289:4_Kc-5_H4K8ac.1246.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_pirrota_1513_Kc-4_H4K8ac.1245.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3289:3_Kc-4_H4K8ac.1245.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3289 3289_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K8ac:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3289:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K8ac Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3290 3290_pirrota_1153_Elate8_Input(20cyc).975.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3290:3_Elate8_Input(20cyc).975.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3290 3290_repset.9703085.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3290:repset.9703085.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3290 3290_1210.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3290:1210.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -7102,14 +7111,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3290 3290_pirrota_1152_Elate7_Input(20cyc).974.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3290:2_Elate7_Input(20cyc).974.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3290 3290_1209.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3290:1209.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3290 3290_pirrota_1487_Elate7_HP1b.1209.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3290:7_Elate7_HP1b.1209.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_1272.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291:1272.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_1271.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291:1271.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_repset.9704082.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_pirrota_1559_S15_HP1c.1271.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3291:59_S15_HP1c.1271.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_pirrota_15660_S17_HP1c.1272.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3291:660_S17_HP1c.1272.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_repset.9704082.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291:repset.9704082.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_pirrota_1568_S15_Input(20cyc).1280.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3291:8_S15_Input(20cyc).1280.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3291 3291_pirrota_1569_S17_Input(20cyc).1281.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3291:9_S17_Input(20cyc).1281.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_1272.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291:1272.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_1271.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291:1271.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_repset.9704082.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_pirrota_1559_S15_HP1c.1271.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3291:59_S15_HP1c.1271.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_pirrota_15660_S17_HP1c.1272.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3291:660_S17_HP1c.1272.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_repset.9704082.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3291:repset.9704082.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_pirrota_1568_S15_Input(20cyc).1280.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3291:8_S15_Input(20cyc).1280.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3291 3291_pirrota_1569_S17_Input(20cyc).1281.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3291:9_S17_Input(20cyc).1281.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3292 3292_919.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3292:919.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3292 3292_pirrota_1208_L3-7_Input.939.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3292:208_L3-7_Input.939.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3292 3292_repset.9702409.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JIL-1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3292:repset.9702409.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -7118,38 +7127,38 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3292 3292_pirrota_1188_L3-7_JIL1Q3433.919.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3292:188_L3-7_JIL1Q3433.919.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3292 3292_pirrota_1434_L3_8_Input.1184.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3292:434_L3_8_Input.1184.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3292 3292_pirrota_1428_L3_JIL_1Q3433.1178.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JIL-1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3292:428_L3_JIL_1Q3433.1178.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JIL-1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_repset.9703021.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293:repset.9703021.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_1238.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293:1238.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_repset.9703021.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3293:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3293:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_1237.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293:1237.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_pirrota_1507_A21_MSL1(Q4453).1238.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3293:7_A21_MSL1(Q4453).1238.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3293 3293_pirrota_1506_A20_MSL1(Q4453).1237.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3293:6_A20_MSL1(Q4453).1237.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_repset.4620426.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294:repset.4620426.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_pirrota_243_S12_Input(20_cycles).86.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3294:243_S12_Input(20_cycles).86.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_pirrota_506_A12_Input(20cyc).328.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3294:506_A12_Input(20cyc).328.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_pirrota_474_A12_POF.285.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3294:4_A12_POF.285.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_repset.4620426.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_284.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294:284.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_285.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294:285.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3294 3294_pirrota_473_S12_POF.284.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3294:3_S12_POF.284.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_1167.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295:1167.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_pirrota_1446_A21_RNA_POL_II.1168.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3295:6_A21_RNA_POL_II.1168.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_repset.9702780.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_pirrota_1445_A20_RNA_POL_II.1167.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3295:5_A20_RNA_POL_II.1167.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3295:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_1168.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295:1168.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_repset.9702780.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295:repset.9702780.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3295 3295_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3295:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3296:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_repset.9703302.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_pirrota_1383_Kc4_RPD3.1138.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3296:3_Kc4_RPD3.1138.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3296:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_1139.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296:1139.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_repset.9703302.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296:repset.9703302.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_1138.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296:1138.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3296 3296_pirrota_1384_Kc5_RPD3.1139.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3296:4_Kc5_RPD3.1139.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_repset.9703021.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293:repset.9703021.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_1238.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293:1238.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_repset.9703021.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3293:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3293:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_1237.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3293:1237.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_pirrota_1507_A21_MSL1(Q4453).1238.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3293:7_A21_MSL1(Q4453).1238.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3293 3293_pirrota_1506_A20_MSL1(Q4453).1237.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MSL-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3293:6_A20_MSL1(Q4453).1237.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MSL-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_repset.4620426.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294:repset.4620426.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_pirrota_243_S12_Input(20_cycles).86.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3294:243_S12_Input(20_cycles).86.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_pirrota_506_A12_Input(20cyc).328.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3294:506_A12_Input(20cyc).328.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_pirrota_474_A12_POF.285.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3294:4_A12_POF.285.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_repset.4620426.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_284.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294:284.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_285.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3294:285.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3294 3294_pirrota_473_S12_POF.284.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3294:3_S12_POF.284.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_1167.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295:1167.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_pirrota_1446_A21_RNA_POL_II.1168.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3295:6_A21_RNA_POL_II.1168.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_repset.9702780.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_pirrota_1445_A20_RNA_POL_II.1167.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3295:5_A20_RNA_POL_II.1167.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_pirrota_1011_A20_Input(20cyc).773.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3295:1_A20_Input(20cyc).773.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_1168.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295:1168.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_repset.9702780.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3295:repset.9702780.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3295 3295_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3295:2_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3296:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_repset.9703302.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_pirrota_1383_Kc4_RPD3.1138.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3296:3_Kc4_RPD3.1138.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3296:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_1139.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296:1139.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_repset.9703302.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296:repset.9703302.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_1138.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3296:1138.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3296 3296_pirrota_1384_Kc5_RPD3.1139.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3296:4_Kc5_RPD3.1139.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3297 3297_repset.9703298.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-7:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3297:repset.9703298.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3297 3297_pirrota_1376_Elate8_Su(var)3-7.1128.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3297:6_Elate8_Su(var)3-7.1128.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3297 3297_pirrota_1153_Elate8_Input(20cyc).975.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-7:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3297:3_Elate8_Input(20cyc).975.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-7 Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -7166,36 +7175,36 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3299 3299_341.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3299:341.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3299 3299_pirrota_481_B1_Input(14cyc).292.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3299:1_B1_Input(14cyc).292.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3299 3299_pirrota_546_B1_H1.340.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3299:6_B1_H1.340.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_pirrota_212_A8_Input.62.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3300:12_A8_Input.62.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_repset.4162651.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_pirrota_465_A8_H1.308.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3300:5_A8_H1.308.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_pirrota_292_A9_Input.136.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3300:92_A9_Input.136.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_308.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300:308.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_309.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300:309.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_pirrota_466_A9_H1.309.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3300:6_A9_H1.309.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3300 3300_repset.4162651.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300:repset.4162651.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_1022_A21_Input(14cycles).789.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:1022_A21_Input(14cycles).789.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_repset.3506199.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:repset.3506199.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_682.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:682.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_785.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:785.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_786.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:786.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_838_A15_Input_DNA(14cyc).609.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:838_A15_Input_DNA(14cyc).609.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_878_A15_H3..649.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:878_A15_H3..649.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_198_S10_Input.48.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:198_S10_Input.48.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_197_S10_H3ab2.47.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:197_S10_H3ab2.47.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_927_A18_H3.682.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:927_A18_H3.682.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_199.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:199.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_88.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:88.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_649.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:649.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_repset.3506199.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_1021_A20_Input(14cycles).788.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:1021_A20_Input(14cycles).788.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_934_A18_Input(14cyc).689.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:934_A18_Input(14cyc).689.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_1018_A20_H3.785.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:1018_A20_H3.785.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_382_S12_H3.199.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:382_S12_H3.199.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_1019_A21_H3.786.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:1019_A21_H3.786.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_pirrota_245_S12_H3ab2.88.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:245_S12_H3ab2.88.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3301 3301_47.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:47.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_pirrota_212_A8_Input.62.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3300:12_A8_Input.62.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_repset.4162651.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_pirrota_465_A8_H1.308.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3300:5_A8_H1.308.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_pirrota_292_A9_Input.136.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3300:92_A9_Input.136.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_308.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300:308.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_309.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300:309.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_pirrota_466_A9_H1.309.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3300:6_A9_H1.309.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3300 3300_repset.4162651.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3300:repset.4162651.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_1022_A21_Input(14cycles).789.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:1022_A21_Input(14cycles).789.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_repset.3506199.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:repset.3506199.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_682.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:682.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_785.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:785.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_786.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:786.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_838_A15_Input_DNA(14cyc).609.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:838_A15_Input_DNA(14cyc).609.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_878_A15_H3..649.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:878_A15_H3..649.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_198_S10_Input.48.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:198_S10_Input.48.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_197_S10_H3ab2.47.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:197_S10_H3ab2.47.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_927_A18_H3.682.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:927_A18_H3.682.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_199.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:199.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_88.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:88.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_649.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:649.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_repset.3506199.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_1021_A20_Input(14cycles).788.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:1021_A20_Input(14cycles).788.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_934_A18_Input(14cyc).689.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3301:934_A18_Input(14cyc).689.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_1018_A20_H3.785.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:1018_A20_H3.785.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_382_S12_H3.199.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:382_S12_H3.199.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_1019_A21_H3.786.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:1019_A21_H3.786.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_pirrota_245_S12_H3ab2.88.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3301:245_S12_H3ab2.88.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3301 3301_47.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3301:47.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3302 3302_pirrota_1242_B3_Input(14cyc).1000.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3302:1242_B3_Input(14cyc).1000.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3302 3302_repset.9700023.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3302:repset.9700023.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3302 3302_943.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3302:943.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -7212,20 +7221,20 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3303 3303_pirrota_511_B2_Input.315.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3303:1_B2_Input.315.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3303 3303_repset.4620570.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3303.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3303 3303_pirrota_510_B2_H4pan.314.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3303:0_B2_H4pan.314.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_pirrota_516_S12_H4-pan.330.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3304:516_S12_H4-pan.330.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_279.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304:279.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_repset.4620571.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304:repset.4620571.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_pirrota_461_S10_H4pan.279.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3304:461_S10_H4pan.279.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_pirrota_273_S12_Input.112.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3304:3_S12_Input.112.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_pirrota_271_S10_Input.110.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3304:1_S10_Input.110.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_330.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304:330.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3304 3304_repset.4620571.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3307 3307_V031.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3307:31.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3307 3307_V019.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3307:19.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3309 3309_V034.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3309.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3310 3310_V010.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3310:10.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3310 3310_V036.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3310:36.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3311 3311_V032.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3311.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3304 3304_pirrota_516_S12_H4-pan.330.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3304:516_S12_H4-pan.330.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_279.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304:279.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_repset.4620571.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304:repset.4620571.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_pirrota_461_S10_H4pan.279.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3304:461_S10_H4pan.279.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_pirrota_273_S12_Input.112.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3304:3_S12_Input.112.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_pirrota_271_S10_Input.110.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3304:1_S10_Input.110.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_330.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304:330.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3304 3304_repset.4620571.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3304.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3307 3307_V031.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3307:31.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3307 3307_V019.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3307:19.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3309 3309_V034.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3309.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3310 3310_V010.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3310:10.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3310 3310_V036.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3310:36.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3311 3311_V032.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3311.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3314 3314_SRR069242.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-Female#Strain=r2d2-1#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3314.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=r2d2 1#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3314 3314_Lai_V0882.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=r2d2-1#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3314:Lai_V0882.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=r2d2 1#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3314 3314_V088.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-Female#Strain=r2d2-1#Tissue=Adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3314:V088.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Female Developmental-Stage=Adult Female#Strain=r2d2 1#Tissue=Adult ovaries Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling @@ -7240,7 +7249,7 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3317 3317_LID18723_FC61WU3AAXX_4_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3317:LID18723_FC61WU3AAXX_4_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3317 3317_LID8547_FC61WU3AAXX_6_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3317:LID8547_FC61WU3AAXX_6_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3317 3317_SRR080771.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3317:SRR080771.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3318 3318_V014.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-HDR#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3318.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-HDR#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3318 3318_V014.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-HDR#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3318.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-HDR#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3320 3320_AB2886_H3K79ME1_361912_N2_L3_1_A_396343_650_545_K79me1_mE5_p_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K79me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3320.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K79me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3320 3320_AB2886_H3K79ME1_361912_N2_L3_1_A_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3320:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K79me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3320 3320_AB2886_H3K79ME1_361912_N2_L3_2_A_19530901_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K79me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3320.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K79me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement @@ -7276,34 +7285,62 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3328 3328_SRR077256.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3328.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3329 3329_SRR077257.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3329.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3329 3329_L1_arrest_FC42B89HM_s_4_elegans.WS220.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3329.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3358 3358_LID8386_FC61WU3AAXX_1_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358:LID8386_FC61WU3AAXX_1_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_LID8543_FC61WU3AAXX_2_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358:LID8543_FC61WU3AAXX_2_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_SRR080768.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358:SRR080768.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_SRR080769.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358:SRR080769.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_LID8386_FC61WU3AAXX_1_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358:LID8386_FC61WU3AAXX_1_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_LID8543.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_LID8386.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3358 3358_LID8543_FC61WU3AAXX_2_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358:LID8543_FC61WU3AAXX_2_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_LID8388_FC61WU3AAXX_3_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359:LID8388_FC61WU3AAXX_3_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_LID8544_FC61WU3AAXX_5_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359:LID8544_FC61WU3AAXX_5_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_LID8544.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_SRR080770.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359:SRR080770.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_SRR080772.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359:SRR080772.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_LID8544_FC61WU3AAXX_5_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359:LID8544_FC61WU3AAXX_5_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_LID8388_FC61WU3AAXX_3_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359:LID8388_FC61WU3AAXX_3_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3359 3359_LID8388.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_SRR080775.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360:SRR080775.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_LID9055.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_LID9056.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_LID9055_FC61WU3AAXX_7_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360:LID9055_FC61WU3AAXX_7_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_LID9055_FC61WU3AAXX_7_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360:LID9055_FC61WU3AAXX_7_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_LID9056_FC61WU3AAXX_8_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360:LID9056_FC61WU3AAXX_8_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_LID9056_FC61WU3AAXX_8_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360:LID9056_FC61WU3AAXX_8_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3360 3360_SRR080774.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360:SRR080774.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_LID8386_FC61WU3AAXX_1_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358:LID8386_FC61WU3AAXX_1_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_LID8543_FC61WU3AAXX_2_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358:LID8543_FC61WU3AAXX_2_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_SRR080768.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358:SRR080768.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_SRR080769.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358:SRR080769.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_LID8386_FC61WU3AAXX_1_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358:LID8386_FC61WU3AAXX_1_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_LID8543.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_LID8386.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3358.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3358 3358_LID8543_FC61WU3AAXX_2_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3358:LID8543_FC61WU3AAXX_2_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_LID8388_FC61WU3AAXX_3_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359:LID8388_FC61WU3AAXX_3_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_LID8544_FC61WU3AAXX_5_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359:LID8544_FC61WU3AAXX_5_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_LID8544.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_SRR080770.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359:SRR080770.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_SRR080772.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359:SRR080772.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_LID8544_FC61WU3AAXX_5_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3359:LID8544_FC61WU3AAXX_5_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_LID8388_FC61WU3AAXX_3_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359:LID8388_FC61WU3AAXX_3_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3359 3359_LID8388.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3359.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_SRR080775.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360:SRR080775.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_LID9055.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_LID9056.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_LID9055_FC61WU3AAXX_7_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360:LID9055_FC61WU3AAXX_7_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_LID9055_FC61WU3AAXX_7_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360:LID9055_FC61WU3AAXX_7_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_LID9056_FC61WU3AAXX_8_2_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360:LID9056_FC61WU3AAXX_8_2_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_LID9056_FC61WU3AAXX_8_1_R1-matrix.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3360:LID9056_FC61WU3AAXX_8_1_R1-matrix.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3360 3360_SRR080774.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3360:SRR080774.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3361 3361_JL00006_ZFP1_RB774_MXEMB_1_A_13805901_peaks.gff.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3361.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3361 3361_JL00006_ZFP1_RB774_MXEMB_1_A_13805901_MA2Cscore.wig.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3361.wig.gz normalized-arrayfile_wiggle C. elegans Non TF Chromatin binding factor ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3361 3361_JL00006_ZFP1_RB774_MXEMB_1_A_13805901_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3361.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3361 3361_JL00006_ZFP1_RB774_MXEMB_1_A_13805901_635.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3361.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites +3366 3366_Snyder_DPL-1_GFP_L4_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3366:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3366:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_Input_L4.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3366:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3366:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep1_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3366.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3366.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3366:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3366:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep2_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3366.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_Input_L4_rep2_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3366.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_Input_L4_rep1_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3366.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3366:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_Input_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3366:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3366 3366_Snyder_DPL-1_GFP_L4_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Larvae-L4-stage#Strain=OP105#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3366:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq DPL-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP105#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3367:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_Input_L1_rep1_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3367.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_Input_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3367:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3367.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_Input_L1_rep2_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3367.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3367:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3367:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep2_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3367.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3367:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep1_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3367.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3367:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3367:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3367:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3367 3367_Snyder_C16A3.4_GFP_L1_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C16A3.4:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP345#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3367:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C16A3.4 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP345#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3371 3371_Snyder_C01B12.2_GFP_L2_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 C01B12.2:Developmental-Stage=Larvae-L2-stage#Strain=OP343#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3371:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq C01B12.2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP343#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3371 3371_Snyder_C01B12.2_GFP_L2_rep1_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq C01B12.2:Developmental-Stage=Larvae-L2-stage#Strain=OP343#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3371.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq C01B12.2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP343#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3371 3371_Snyder_C01B12.2_GFP_L2_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle C01B12.2:Developmental-Stage=Larvae-L2-stage#Strain=OP343#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3371:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq C01B12.2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP343#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -7444,6 +7481,20 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3382 3382_Snyder_ALY-2_GFP_L3_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L3-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3382:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3382 3382_Snyder_ALY-2_GFP_L3_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ALY-2:Developmental-Stage=Larvae-L3-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3382:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3382 3382_Snyder_ALY-2_GFP_L3_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ALY-2:Developmental-Stage=Larvae-L3-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3382.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3383:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_Input_L2_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3383:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3383:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3383:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3383:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3383:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_Input_L2_rep1_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3383.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3383:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3383:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_Input_L2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3383:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep2_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3383.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep1_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3383.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_GFP_L2_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3383.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3383 3383_Snyder_ALY-2_Input_L2_rep2_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq ALY-2:Developmental-Stage=Larvae-L2-stage#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3383.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq ALY-2 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3384 3384_Snyder_ALY-2_GFP_L1_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ALY-2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3384:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ALY-2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3384 3384_Snyder_ALY-2_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ALY-2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3384:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ALY-2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP217#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3384 3384_Snyder_ALY-2_GFP_L1_rep2_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq ALY-2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP217#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3384.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq ALY-2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP217#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites @@ -7524,6 +7575,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3396 3396_SRR080717.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq Su(var)3-9:Developmental-Stage=Embryos-0-12-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3396.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq Su(var)3-9 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 3396 3396_E0-12h_SuVar3-9_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle Su(var)3-9:Developmental-Stage=Embryos-0-12-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3396.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq Su(var)3-9 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 3396 3396_SRR080718.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq Su(var)3-9:Developmental-Stage=Embryos-0-12-hr:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_3396.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq Su(var)3-9 Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3397 3397_E8-16h_Trl_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle GAF:Developmental-Stage=Embryos-8-16-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3397.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq GAF Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3397 3397_E8-16h_Trl_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 GAF:Developmental-Stage=Embryos-8-16-hr:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3397.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq GAF Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3397 3397_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq GAF:Developmental-Stage=Embryos-8-16-hr:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_3397.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq GAF Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. TF binding sites 3399 3399_A.Female_Trem_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 trem:Developmental-Stage=Adult-Female:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3399.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq trem Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites 3399 3399_A.Female_Trem_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle trem:Developmental-Stage=Adult-Female:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_3399.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq trem Adult Female Developmental-Stage=Adult Female Rep-1 Dmel_r5.32 White, K. TF binding sites 3400 3400_R13_E1-6h_Set2_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle eGFP:Developmental-Stage=Embryos-1-6-hr#Strain=R13-YFP:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_3400.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq eGFP Embryos 1-6 hr Developmental-Stage=Embryos 1-6 hr#Strain=R13-YFP Rep-1 Dmel_r5.32 White, K. TF binding sites @@ -7602,62 +7656,62 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3435 3435_JL00001_DPY27_N2_EEMB_2_OID29991_19964901_532.pair.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_pair DPY-27:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3435.pair.gz raw-arrayfile_pair C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Other chromatin binding sites 3435 3435_JL00001_DPY27_N2_EEMB_1_OID28862+2_OID29991_cat.gff.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 DPY-27:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3435:1_OID28862+2_OID29991_cat.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites 3435 3435_JL00001_DPY27_N2_EEMB_1_OID28862_peaks.gff.gz C.elegans/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 DPY-27:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3435:1_OID28862_peaks.gff3.gz computed-peaks_gff3 C. elegans Non TF Chromatin binding factor ChIP-chip DPY-27 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Other chromatin binding sites -3438 3438_SDQ2324_HPL2_N2_LTEMB_1_16707201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_1+2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3438:+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3438:.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_2_18611201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_2_18611201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3438.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3438.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3438 3438_SDQ2324_HPL2_N2_LTEMB_1_16707201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_18606601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_17731701_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3439.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_18606601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_17731701_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3439 3439_SDQ2330_LIN15B_N2_LTEMB_1+2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 LIN-15B:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439:1+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3440 3440_L3-L4-rectal_epithelial_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_534DMM027720100802-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3440:27720100802.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_L3-L4-rectal_epithelial-277_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:277_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_L3-L4-rectal_epithelial_tars_maxgap30_minrun100_thresh7.74.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_L3-L4-rectal_epithelial-276_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:276_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_534DMM0276-20100426-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3440:276-20100426.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_L3-L4-rectal_epithelial-306_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:306_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3440 3440_534DMM030620100802-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3440:30620100802.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling -3441 3441_early_origin_meta_peaks.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:early_origin_meta_peaks.gff3.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3441 3441_S2_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:S2_early_origins_peaks.gff.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3441 3441_Kc_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Kc.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3441 3441_Bg3_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Bg3_early_origins_peaks.gff.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3441 3441_Kc_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Kc_early_origins_peaks.gff.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3441 3441_Bg3_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Bg3.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3438 3438_SDQ2324_HPL2_N2_LTEMB_1_16707201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_1+2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3438:+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3438:.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_2_18611201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_2_18611201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3438.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3438.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3438 3438_SDQ2324_HPL2_N2_LTEMB_1_16707201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3438.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_18606601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_17731701_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3439.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_2_18606601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_1_17731701_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3439.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3439 3439_SDQ2330_LIN15B_N2_LTEMB_1+2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 LIN-15B:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3439:1+2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip LIN-15B Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3440 3440_L3-L4-rectal_epithelial_smooth_log2_winsize110.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:smooth_log2_winsize110.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_534DMM027720100802-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3440:27720100802.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_L3-L4-rectal_epithelial-277_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:277_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_L3-L4-rectal_epithelial_tars_maxgap30_minrun100_thresh7.74.gff3.gz C.elegans/mRNA/RNA-tiling-array/computed-peaks_gff3 total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440.gff3.gz computed-peaks_gff3 C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_L3-L4-rectal_epithelial-276_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:276_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_534DMM0276-20100426-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3440:276-20100426.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_L3-L4-rectal_epithelial-306_pm_mm.wig.gz C.elegans/mRNA/RNA-tiling-array/normalized-arrayfile_wiggle total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1::Cele_WS220:modENCODE_3440:306_pm_mm.wig.gz normalized-arrayfile_wiggle C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3440 3440_534DMM030620100802-CeT.CEL.gz C.elegans/mRNA/RNA-tiling-array/raw-arrayfile_CEL total-RNA:Developmental-Stage=L3-L4-22-hr-23dC-24-hr-post-L1-stage-larvae#Strain=CB6845#Tissue=Rectal-epithelial-cells-(L3-L4)#temperature=23-degree-celsius:RNA-tiling-array:Rep-1:Biotin:Cele_WS220:modENCODE_3440:30620100802.CEL.gz raw-arrayfile_CEL C. elegans mRNA RNA-tiling-array total-RNA L3-L4 22 hr 23dC 24 hr post-L1 stage larvae Developmental-Stage=L3-L4 22 hr 23dC 24 hr post-L1 stage larvae#Strain=CB6845#Tissue=Rectal epithelial cells (L3-L4)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. RNA expression profiling +3441 3441_early_origin_meta_peaks.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:early_origin_meta_peaks.gff3.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3441 3441_S2_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:S2_early_origins_peaks.gff.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3441 3441_Kc_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Kc.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3441 3441_Bg3_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Bg3_early_origins_peaks.gff.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3441 3441_Kc_early_origins_peaks.gff.gz D.melanogaster/DNA-Replication/ChIP-chip/computed-peaks_gff3 ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Kc_early_origins_peaks.gff.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3441 3441_Bg3_early_origins_MA2Cscore.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle ORC2:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3441:Bg3.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip ORC2 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication 3445 3445_BS247_61FGCAAXX_lane1_all.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3445.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3445 3445_SRR070394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3445.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3445 3445_BS246_61F4LAAXX_lane1_all.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3445.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3445 3445_SRR070398.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3445.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3446 3446_BS249_61F4LAAXX_lane2_all.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3446.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3446 3446_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3446.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3446 3446_BS250_61FGCAAXX_lane2_all.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3446.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3446 3446_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3446.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3506 3506_Lai_V133.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3506:Lai_V133.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3506 3506_V011.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3506:V011.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3446 3446_BS249_61F4LAAXX_lane2_all.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3446.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3446 3446_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3446.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3446 3446_BS250_61FGCAAXX_lane2_all.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3446.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3446 3446_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3446.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3506 3506_Lai_V133.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3506:Lai_V133.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3506 3506_V011.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3506:V011.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3508 3508_SRR069246.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3508.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3508 3508_Lai_V129.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3508:Lai_V129.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3508 3508_V075.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3508:V075.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmBG1-c1#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3510 3510_Lai_V130.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3510:Lai_V130.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3510 3510_SRR069243.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3510.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3510 3510_V076.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3510:V076.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3511 3511_V008.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3511:V008.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3511 3511_Lai_V145.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3511:Lai_V145.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3512 3512_V029.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3512:V029.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3512 3512_Lai_V125.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3512:Lai_V125.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3513 3513_V030.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3513:V030.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3513 3513_Lai_V134.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3513:Lai_V134.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3514 3514_Lai_V132.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3514:Lai_V132.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3514 3514_V022.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3514:V022.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3514 3514_V035.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3514:V035.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3511 3511_V008.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3511:V008.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3511 3511_Lai_V145.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3511:Lai_V145.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3512 3512_V029.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3512:V029.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3512 3512_Lai_V125.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3512:Lai_V125.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3513 3513_V030.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3513:V030.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3513 3513_Lai_V134.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3513:Lai_V134.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3514 3514_Lai_V132.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3514:Lai_V132.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3514 3514_V022.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3514:V022.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3514 3514_V035.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3514:V035.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling 3516 3516_3516.merged.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-Drechmeria-coniospora-1-5-hrs#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3516.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Adult Drechmeria coniospora 1 5 hr Developmental-Stage=Adult Drechmeria coniospora 1 5 hrs#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3516 3516_SRR089303.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Drechmeria-coniospora-1-5-hrs#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3516:3.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Adult Drechmeria coniospora 1 5 hr Developmental-Stage=Adult Drechmeria coniospora 1 5 hrs#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3516 3516_DC-1-5.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Adult-Drechmeria-coniospora-1-5-hrs#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3516:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Adult Drechmeria coniospora 1 5 hr Developmental-Stage=Adult Drechmeria coniospora 1 5 hrs#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -7730,40 +7784,67 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3538 3538_DISN147_H4K20ME1_001_N2_L3_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3538:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3538 3538_DISN147_H4K20ME1:001_N2_L3_2_DISN147_H4K20me1_001_N2-L3_rep2_18970901_IP_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-dye:Cele_WS220:modENCODE_3538.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3538 3538_DISN147_H4K20ME1_001_N2_L3_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3538.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H4K20me1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_4_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:4.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_5_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:5.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_6_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_3544.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_4_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_4_17033301_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_6_17460701_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_5_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3544.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_4+5+6_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:4+5+6.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_5_17461601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_5_17461601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_6_17460701_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_4_17033301_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3544 3544_ABAB817_8WG16_N2_EEMB_6_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:6.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_3_17260601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_1_17038101_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3545.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_2_17487701_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_3_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_3545.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_3_17260601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_1+2+3_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:1+2+3.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_1_17038101_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_3_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:3.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3545 3545_ABAB817_8WG16_N2_LTEMB_2_17487701_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair pol2:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip pol2 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3540 3540_OD00079_HCP3_N2_EEMB_ave.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3540.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_rep6.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-6::Cele_WS220:modENCODE_3540.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-6 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_rep5.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-5::Cele_WS220:modENCODE_3540.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-5 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_6_MA2Cscore.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3540.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_6_17488001_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3540.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_5_MA2Cscore.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3540.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_6_17488001_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3540.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_5_17487401_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3540.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3540 3540_OD00079_HCP3_N2_EEMB_5_17487401_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3540.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_rep3.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_3542.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_1_17038401_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3542.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_3_17260901_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3542.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_rep1.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3542:rep1.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_1_17038401_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3542.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_3_MA2Cscore.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3542.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_ave.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3542:ave.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_3_17260901_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3542.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3542 3542_OD00079_HCP3_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3542.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3543.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_2_17261201_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3543.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_ave.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3543:ave.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_1_17023701_635.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3543.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_rep2.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3543.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Chromatin-Structure/ChIP-chip/normalized-arrayfile_wiggle HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3543.wig.gz normalized-arrayfile_wiggle C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_2_17261201_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3543.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_1_17023701_532.pair.gz C.elegans/Chromatin-Structure/ChIP-chip/raw-arrayfile_pair HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3543.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3543 3543_SDQ0804_HCP3_N2_LTEMB_rep1.gff.gz C.elegans/Chromatin-Structure/ChIP-chip/computed-peaks_gff3 HCP-3:Developmental-Stage=Late-Embryonic-stage#Strain=N2#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3543:rep1.gff3.gz computed-peaks_gff3 C. elegans Chromatin Structure ChIP-chip HCP-3 Late Embryos Developmental-Stage=Late Embryonic stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Chromatin structure +3544 3544_ABAB817_8WG16_N2_EEMB_4_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:4.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_5_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:5.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_6_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_3544.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_4_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_4_17033301_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_6_17460701_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_5_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3544.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_4+5+6_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:4+5+6.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_5_17461601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_5_17461601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_6_17460701_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_4_17033301_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3544.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3544 3544_ABAB817_8WG16_N2_EEMB_6_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3544:6.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_3_17260601_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_1_17038101_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_2_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3545.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_2_17487701_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_3_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3::Cele_WS220:modENCODE_3545.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_3_17260601_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-3:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-3 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_1+2+3_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:1+2+3.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_1_17038101_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_3_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:3.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3545:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3545 3545_ABAB817_8WG16_N2_LTEMB_2_17487701_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair RNA-polymerase-II:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-monofunctional-dye(1-):Cele_WS220:modENCODE_3545.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip RNA polymerase II Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3546 3546_WA30534819_H3K4ME3_N2_EEMB_1_OID28399_18972801_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3546.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3546 3546_WA30534819_H3K4ME3_N2_EEMB_1_OID28399_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3546.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3546 3546_WA30534819_H3K4ME3_N2_EEMB_1_OID28399_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3546.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3546 3546_WA30534819_H3K4ME3_N2_EEMB_1_OID28399_18972801_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3546.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_18972501_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3547.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3547.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_18972501_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3547.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3547.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_18972501_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3547.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3547.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_18972501_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3547.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3547 3547_WA30534819_H3K4ME3_N2_LTEMB_1_OID28399_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3547.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K4me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3548 3548_WA30534819_H3K4ME3_N2_L1_1_OID28399_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Developmental-Stage=Larvae-L1-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3548.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K4me3 Larvae L1 stage Developmental-Stage=Larvae L1 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3548 3548_WA30534819_H3K4ME3_N2_L1_1_OID28399_18971201_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Larvae-L1-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3548.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Larvae L1 stage Developmental-Stage=Larvae L1 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3548 3548_WA30534819_H3K4ME3_N2_L1_1_OID28399_18971201_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K4me3:Developmental-Stage=Larvae-L1-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3548.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K4me3 Larvae L1 stage Developmental-Stage=Larvae L1 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -7788,10 +7869,10 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3553 3553_HK00001_H3K36ME3_13C9_N2_EEMB_1_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3553.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3553 3553_HK00001_H3K36ME3_13C9_N2_EEMB_1_OID30311_19973401_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3553.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3553 3553_HK00001_H3K36ME3_13C9_N2_EEMB_1_OID30311_19973401_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Early-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3553.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Early Embryos Developmental-Stage=Early Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3554.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_20015101_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3554.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3554.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_20015101_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3554.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3554.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_20015101_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3554.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K36me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3554.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3554 3554_HK00001_H3K36ME3_13C9_N2_LTEMB_1_OID30311_20015101_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3554.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3555 3555_HK00001_H3K36ME3_13C9_N2_L1_1_OID30311_20010801_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Larvae-L1-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy5-dye:Cele_WS220:modENCODE_3555.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Larvae L1 stage Developmental-Stage=Larvae L1 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3555 3555_HK00001_H3K36ME3_13C9_N2_L1_1_OID30311_20010801_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair H3K36me3:Developmental-Stage=Larvae-L1-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1:Cy3-dye:Cele_WS220:modENCODE_3555.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip H3K36me3 Larvae L1 stage Developmental-Stage=Larvae L1 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3555 3555_HK00001_H3K36ME3_13C9_N2_L1_1_OID30311_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Larvae-L1-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3555.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip H3K36me3 Larvae L1 stage Developmental-Stage=Larvae L1 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -7821,26 +7902,26 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3561 3561_SDQ3517_ZFP1_N2_MXEMB_2_EE6_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2::Cele_WS220:modENCODE_3561.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3561 3561_SDQ3517_ZFP1_N2_MXEMB_2_EE6_387653_640_530_3517_p_635.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy5-monofunctional-dye(1-):Cele_WS220:modENCODE_3561.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3561 3561_SDQ3517_ZFP1_N2_MXEMB_1_EE4_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle ZFP-1:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3561.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip ZFP-1 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_2_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_7_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:7.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-NA_N2_L3_3.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:seq-NA_N2_L3_3.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_SRR190661.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:SRR190661.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-NA_N2_L3_1_mE1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:seq-NA_N2_L3_1_mE1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_SRR190660.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:SRR190660.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:seq-AB1791_H3_N2_L3_2.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_7_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:7_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_SRR190663.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:SRR190663.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-NA_N2_L3_3_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:3.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:seq-AB1791_H3_N2_L3_1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_7.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:seq-AB1791_H3_N2_L3_7.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_2_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:2_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_SRR190664.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:SRR190664.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-NA_N2_L3_IL-1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:seq-NA_N2_L3_IL-1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-NA_N2_L3_1_mE1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:1_mE1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-AB1791_H3_N2_L3_1_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:1_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3562 3562_seq-NA_N2_L3_IL-1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=Ab-AB1791-H3--JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:IL-1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:AB1791 H3 :JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_2_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_7_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:7.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-NA_N2_L3_3.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:seq-NA_N2_L3_3.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_SRR190661.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:SRR190661.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-NA_N2_L3_1_mE1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:seq-NA_N2_L3_1_mE1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_SRR190660.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:SRR190660.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:seq-AB1791_H3_N2_L3_2.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_7_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:7_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_SRR190663.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:SRR190663.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-NA_N2_L3_3_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:3.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:seq-AB1791_H3_N2_L3_1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_7.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:seq-AB1791_H3_N2_L3_7.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_2_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:2_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_SRR190664.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3562:SRR190664.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-NA_N2_L3_IL-1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:seq-NA_N2_L3_IL-1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-NA_N2_L3_1_mE1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:1_mE1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-AB1791_H3_N2_L3_1_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3562:1_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3562 3562_seq-NA_N2_L3_IL-1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3:Developmental-Stage=Larvae-L3-stage#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3562:IL-1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3563 3563_seq-NA_N2_L3_1_E77_macs14_treat_afterfiting_catted.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K36me3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3563:1_E77_macs14_treat_afterfiting_catted.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3563 3563_seq-AB9050_H3K36me3_N2_L3_1_catted.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K36me3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3563:1_catted.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3563 3563_SRR340087.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K36me3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3563:SRR340087.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -7855,19 +7936,19 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3563 3563_seq-NA_N2_L3_IL-1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K36me3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3563:seq-NA_N2_L3_IL-1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3563 3563_seq-AB9050_H3K36me3_N2_L3_7_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3K36me3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3563:7_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3563 3563_seq-NA_N2_L3_1_E77.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K36me3:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3563:seq-NA_N2_L3_1_E77.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq H3K36me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_1+2_catted_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3565:1+2_catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_2_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3565:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_1_macs14_treat_afterfiting.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:1_macs14_treat_afterfiting.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_1_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3565:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-NA_N2_L3_1_mE1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:1_mE1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-NA_N2_L3_2_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-NA_N2_L3_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:seq-NA_N2_L3_2.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_SRR192330.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:SRR192330.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-NA_N2_L3_1_mE1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:seq-NA_N2_L3_1_mE1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_2_catted.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:2_catted.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_SRR190660.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:SRR190660.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3565 3565_seq-BH00001_LIN52_N2_L3_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_1+2_catted_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3565:1+2_catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_2_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3565:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_1_macs14_treat_afterfiting.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:1_macs14_treat_afterfiting.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_1_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3565:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-NA_N2_L3_1_mE1_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:1_mE1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-NA_N2_L3_2_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-NA_N2_L3_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:seq-NA_N2_L3_2.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_SRR192330.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:SRR192330.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-NA_N2_L3_1_mE1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:seq-NA_N2_L3_1_mE1.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_2_catted.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:2_catted.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_SRR190660.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3565:SRR190660.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3565 3565_seq-BH00001_LIN52_N2_L3_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3565:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3566 3566_SRR192330.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3566:SRR192330.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3566 3566_seq-BH00003_LIN37_N2_L3_1_macs14_treat_afterfiting.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3566:1_macs14_treat_afterfiting.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3566 3566_seq-BH00003_LIN37_N2_L3_2_catted.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3566:2_catted.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -7998,39 +8079,39 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3577 3577_seq-SDQ3590_EFL1_N2_L3_1_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3577:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3577 3577_SRR190660.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3577:SRR190660.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3577 3577_SRR192330.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3577:SRR192330.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-SDQ4470_TAG315_N2_MXemb_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3579:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_SRR190706.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3579:SRR190706.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-NA_N2_MXemb_6_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3579.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-SDQ4470_TAG315_N2_MXemb_2_A_EE9_KI033_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:2_A_EE9_KI033.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-SDQ4470_TAG315_N2_MXemb_2_A_EE9_KI033_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3579:2_A_EE9_KI033_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_KI33e_01757_GCCAAT_s_6_sequence.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:KI33e_01757_GCCAAT_s_6_sequence.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_SRR190708.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:SRR190708.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_KI32e_01756_TGACCA_s_6_sequence.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:KI32e_01756_TGACCA_s_6_sequence.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-NA_N2_MXemb_6_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3579:seq-NA_N2_MXemb_6_EE8.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-SDQ4470_TAG315_N2_MXemb_1_A_EE8_KI032_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:1_A_EE8_KI032.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3579 3579_seq-SDQ4470_TAG315_N2_MXemb_1_A_EE8_KI032_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 TAG315:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4470-TAG315-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3579:1_A_EE8_KI032_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4470 TAG315:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3580:1_A_EE8_KI034_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3580:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-NA_N2_MXemb_6_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3580:seq-NA_N2_MXemb_6_EE8.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3580:2_A_EE9_KI035_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_SRR190710.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:SRR190710.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_SRR190706.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3580:SRR190706.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:1_A_EE8_KI034.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-NA_N2_MXemb_6_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3580.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3580 3580_seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle SFC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4526-SFC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:2_A_EE9_KI035.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4526 SFC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-NA_N2_MXemb_6_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3581.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3581:2_A_EE9_KI031_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3581:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:1_A_EE8.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-NA_N2_MXemb_6_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3581.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_SRR190712.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:SRR190712.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3581:1_A_EE8_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_SRR190711.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:SRR190711.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3581 3581_seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle RPC-1:Developmental-Stage=Mixed-Embryos#Strain=Ab-SDQ4663-RPC1-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:2_A_EE9_KI031.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=Ab:SDQ4663 RPC1:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-SDQ4470_TAG315_N2_MXemb_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3579:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_SRR190706.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3579:SRR190706.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-NA_N2_MXemb_6_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3579.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-SDQ4470_TAG315_N2_MXemb_2_A_EE9_KI033_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:2_A_EE9_KI033.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-SDQ4470_TAG315_N2_MXemb_2_A_EE9_KI033_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3579:2_A_EE9_KI033_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_KI33e_01757_GCCAAT_s_6_sequence.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:KI33e_01757_GCCAAT_s_6_sequence.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_SRR190708.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:SRR190708.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_KI32e_01756_TGACCA_s_6_sequence.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:KI32e_01756_TGACCA_s_6_sequence.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-NA_N2_MXemb_6_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3579:seq-NA_N2_MXemb_6_EE8.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-SDQ4470_TAG315_N2_MXemb_1_A_EE8_KI032_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3579:1_A_EE8_KI032.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3579 3579_seq-SDQ4470_TAG315_N2_MXemb_1_A_EE8_KI032_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 TAG315:Developmental-Stage=Mixed-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3579:1_A_EE8_KI032_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq TAG315 Mixed Embryos Developmental-Stage=Mixed Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3580:1_A_EE8_KI034_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3580:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-NA_N2_MXemb_6_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3580:seq-NA_N2_MXemb_6_EE8.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3580:2_A_EE9_KI035_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_SRR190710.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:SRR190710.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_SRR190706.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3580:SRR190706.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:1_A_EE8_KI034.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:seq-SDQ4526_SFC1_N2_MXemb_1_A_EE8_KI034.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-NA_N2_MXemb_6_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3580.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3580 3580_seq-SDQ4526_SFC1_N2_MXemb_2_A_EE9_KI035_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle SFC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3580:2_A_EE9_KI035.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq SFC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-NA_N2_MXemb_6_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3581.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3581:2_A_EE9_KI031_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_catted_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3581:catted.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8.f.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:1_A_EE8.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-NA_N2_MXemb_6_EE8.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3581.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_SRR190712.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:SRR190712.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_1_A_EE8_macs14_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3581:1_A_EE8_macs14.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_SRR190711.fastq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:SRR190711.fast.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3581 3581_seq-SDQ4663_RPC1_N2_MXemb_2_A_EE9_KI031_macs14_MACS_wiggle_cat.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle RPC-1:Developmental-Stage=Mixed-Embryos#Strain=N2#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3581:2_A_EE9_KI031.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq RPC-1 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3584 3584_Snyder_UNC-62_GFP_D4YA_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 UNC-62:Developmental-Stage=Day-Four-Young-Adult#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3584:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq UNC-62 Day Four Young Adult Developmental-Stage=Day Four Young Adult#Strain=OP600#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3584 3584_Snyder_UNC-62_GFP_D4YA_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 UNC-62:Developmental-Stage=Day-Four-Young-Adult#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3584:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq UNC-62 Day Four Young Adult Developmental-Stage=Day Four Young Adult#Strain=OP600#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3584 3584_Snyder_UNC-62_GFP_D4YA_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 UNC-62:Developmental-Stage=Day-Four-Young-Adult#Strain=OP600#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3584.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq UNC-62 Day Four Young Adult Developmental-Stage=Day Four Young Adult#Strain=OP600#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites @@ -8059,6 +8140,20 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3585 3585_Snyder_ZAG-1_GFP_L4_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 ZAG-1:Developmental-Stage=Larvae-L4-stage#Strain=OP83#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3585.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq ZAG-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP83#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3585 3585_Snyder_ZAG-1_GFP_L4_rep2_Input_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq ZAG-1:Developmental-Stage=Larvae-L4-stage#Strain=OP83#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3585.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq ZAG-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP83#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3585 3585_Snyder_ZAG-1_Input_L4.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle ZAG-1:Developmental-Stage=Larvae-L4-stage#Strain=OP83#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3585:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq ZAG-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP83#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3586:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3586:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3586.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep1_Input_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3586.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_Input_L3.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3586:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep2_Input_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3586.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep2_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3586.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3586:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3586:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3586:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3586:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep1_GFP_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3586.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_Input_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3586:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3586 3586_Snyder_R02D3.7_GFP_L3_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle R02D3.7:Developmental-Stage=Larvae-L3-stage#Strain=OP218#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3586:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq R02D3.7 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP218#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3587 3587_Snyder_FOS-1_Input_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle FOS-1:Developmental-Stage=Larvae-L3-stage#Strain=OP304#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3587:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq FOS-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP304#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3587 3587_Snyder_FOS-1_GFP_L3_rep1_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq FOS-1:Developmental-Stage=Larvae-L3-stage#Strain=OP304#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3587.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq FOS-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP304#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3587 3587_Snyder_FOS-1_GFP_L3_rep1_Input_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq FOS-1:Developmental-Stage=Larvae-L3-stage#Strain=OP304#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3587.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq FOS-1 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP304#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -8087,6 +8182,20 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3588 3588_Snyder_FOS-1_GFP_L4_rep1_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq FOS-1:Developmental-Stage=Larvae-L4-stage#Strain=OP304#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3588.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq FOS-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP304#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3588 3588_Snyder_FOS-1_GFP_L4_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle FOS-1:Developmental-Stage=Larvae-L4-stage#Strain=OP304#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3588:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq FOS-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP304#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3588 3588_Snyder_FOS-1_GFP_L4_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 FOS-1:Developmental-Stage=Larvae-L4-stage#Strain=OP304#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3588:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq FOS-1 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP304#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3590:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3590:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep1_Input_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3590.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep2_Input_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3590.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep1_GFP_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3590.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3590:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3590:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3590:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3590:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3590.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3590:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3590:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_GFP_L1_rep2_GFP_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3590.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3590 3590_Snyder_ZK377.2_Input_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3590:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3591 3591_Snyder_ZK377.2_GFP_L2_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L2-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3591:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3591 3591_Snyder_ZK377.2_Input_L2_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L2-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3591:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3591 3591_Snyder_ZK377.2_GFP_L2_rep2_GFP_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L2-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3591.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites @@ -8101,6 +8210,48 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3591 3591_Snyder_ZK377.2_GFP_L2_rep1_Input_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L2-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3591.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3591 3591_Snyder_ZK377.2_GFP_L2_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L2-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3591:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3591 3591_Snyder_ZK377.2_Input_L2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L2-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3591:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_Input_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3592:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3592:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3592:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep1_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3592.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep2_Input_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3592.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3592:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep2_GFP_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3592.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3592:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3592:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep1_Input_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3592.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3592.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_Input_L3.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3592:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3592:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3592 3592_Snyder_ZK377.2_GFP_L3_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L3-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3592:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3593:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3593:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_Input_L4.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3593:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3593:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep1_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3593.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep1_Input_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3593.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3593:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3593.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep2_GFP_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3593.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3593:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep2_Input_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3593.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3593:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_Input_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3593:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3593 3593_Snyder_ZK377.2_GFP_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SAX-3:Developmental-Stage=Larvae-L4-stage#Strain=OP355#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3593:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SAX-3 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP355#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep2_GFP_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3594.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3594:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3594:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3594:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3594:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep2_Input_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3594.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_Input_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3594:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3594:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3594:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3594:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3594:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep1_Input_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3594.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep1_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3594.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3594 3594_Snyder_NHR-77_GFP_L1_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-77:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3594.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-77 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP353#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3595 3595_Snyder_NHR-77_GFP_L2_rep1_GFP_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-77:Developmental-Stage=Larvae-L2-stage#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3595.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-77 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3595 3595_Snyder_NHR-77_GFP_L2_rep2_GFP_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-77:Developmental-Stage=Larvae-L2-stage#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3595.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-77 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP353#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3595 3595_Snyder_NHR-77_GFP_L2_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-77:Developmental-Stage=Larvae-L2-stage#Strain=OP353#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3595:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-77 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP353#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -8157,6 +8308,20 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3598 3598_Snyder_NHR-116_GFP_L2_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-116:Developmental-Stage=Larvae-L2-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3598.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3598 3598_Snyder_NHR-116_GFP_L2_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L2-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3598:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3598 3598_Snyder_NHR-116_GFP_L2_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L2-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3598:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3599:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3599:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep2_GFP_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3599.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_Input_L4.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3599:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3599.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_Input_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3599:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep1_Input_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3599.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3599:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep2_Input_TGCT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3599.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3599:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3599:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3599:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep1_GFP_ACGT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3599.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3599 3599_Snyder_NHR-116_GFP_L4_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle NHR-116:Developmental-Stage=Larvae-L4-stage#Strain=OP226#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3599:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq NHR-116 Larvae L4 stage Developmental-Stage=Larvae L4 stage#Strain=OP226#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3600 3600_Snyder_F45C12.2_GFP_L1_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle F45C12.2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP212#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3600:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq F45C12.2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP212#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3600 3600_Snyder_F45C12.2_GFP_L1_rep2_GFP_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq F45C12.2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP212#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3600.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq F45C12.2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP212#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3600 3600_Snyder_F45C12.2_GFP_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle F45C12.2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP212#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3600:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq F45C12.2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP212#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites @@ -8171,28 +8336,42 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3600 3600_Snyder_F45C12.2_GFP_L1_rep1_Input_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq F45C12.2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP212#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3600.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq F45C12.2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP212#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites 3600 3600_Snyder_F45C12.2_GFP_L1_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle F45C12.2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP212#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3600:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq F45C12.2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP212#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites 3600 3600_Snyder_F45C12.2_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle F45C12.2:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP212#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3600:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq F45C12.2 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP212#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites -3608 3608_SRR166814.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3608:4.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling -3608 3608_SRR166813.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3608:3.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling -3609 3609_SRR166811.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3609:1.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling -3609 3609_SRR166812.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3609:2.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling -3610 3610_SRR166834.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3610:4.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Whole Species Developmental-Stage=Dmoj Adult Male Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3610 3610_SRR166835.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Male-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3610:5.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Male Whole Species Developmental-Stage=Dmoj Adult Male Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3611 3611_SRR166833.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3611:3.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Whole Species Developmental-Stage=Dmoj Adult Female Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3611 3611_SRR166832.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dmoj-Adult-Female-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3611:2.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Dmoj Adult Female Whole Species Developmental-Stage=Dmoj Adult Female Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling -3613 3613_SRR166836.fastq.gz D.virilis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dvir-Adult-Female-Whole-Species#Strain=Dvir-wildtype:RNA-seq:Rep-1::Dvir:modENCODE_3613:6.fastq.gz raw-seqfile_fastq D. virilis mRNA RNA-seq total-RNA Dvir Adult Female Whole Species Developmental-Stage=Dvir Adult Female Whole Species#Strain=Dvir wildtype Rep-1 Dvir Oliver, B. RNA expression profiling -3613 3613_SRR166837.fastq.gz D.virilis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dvir-Adult-Female-Whole-Species#Strain=Dvir-wildtype:RNA-seq:Rep-1::Dvir:modENCODE_3613:7.fastq.gz raw-seqfile_fastq D. virilis mRNA RNA-seq total-RNA Dvir Adult Female Whole Species Developmental-Stage=Dvir Adult Female Whole Species#Strain=Dvir wildtype Rep-1 Dvir Oliver, B. RNA expression profiling -3615 3615_SRR166821.fastq.gz D.yakuba/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dyak-Adult-Female-Whole-Species#Strain=Dyak-wildtype:RNA-seq:Rep-1::Dyak:modENCODE_3615:1.fastq.gz raw-seqfile_fastq D. yakuba mRNA RNA-seq total-RNA Dyak Adult Female Whole Species Developmental-Stage=Dyak Adult Female Whole Species#Strain=Dyak wildtype Rep-1 Dyak Oliver, B. RNA expression profiling -3615 3615_SRR166820.fastq.gz D.yakuba/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dyak-Adult-Female-Whole-Species#Strain=Dyak-wildtype:RNA-seq:Rep-1::Dyak:modENCODE_3615:0.fastq.gz raw-seqfile_fastq D. yakuba mRNA RNA-seq total-RNA Dyak Adult Female Whole Species Developmental-Stage=Dyak Adult Female Whole Species#Strain=Dyak wildtype Rep-1 Dyak Oliver, B. RNA expression profiling -3617 3617_SRR166824.fastq.gz D.ananassae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dana-Adult-Female-Whole-Species#Strain=Dananassae:RNA-seq:Rep-1::Dananassae:modENCODE_3617:4.fastq.gz raw-seqfile_fastq D. ananassae mRNA RNA-seq total-RNA Dana Adult Female Whole Species Developmental-Stage=Dana Adult Female Whole Species#Strain=Dananassae Rep-1 Dananassae Oliver, B. RNA expression profiling -3617 3617_SRR166825.fastq.gz D.ananassae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dana-Adult-Female-Whole-Species#Strain=Dananassae:RNA-seq:Rep-1::Dananassae:modENCODE_3617:5.fastq.gz raw-seqfile_fastq D. ananassae mRNA RNA-seq total-RNA Dana Adult Female Whole Species Developmental-Stage=Dana Adult Female Whole Species#Strain=Dananassae Rep-1 Dananassae Oliver, B. RNA expression profiling -3620 3620_SRR166830.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3620:0.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Whole Species Developmental-Stage=Dpse Adult Male Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3620 3620_SRR166831.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Male-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3620:1.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Male Whole Species Developmental-Stage=Dpse Adult Male Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3621 3621_SRR166828.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3621:8.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3621 3621_SRR166829.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3621:9.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -3622 3622_SRR166816.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3622:6.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling -3622 3622_SRR166815.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3622:5.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling -3623 3623_SRR166817.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3623:7.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling -3623 3623_SRR166818.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3623:8.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling +3601 3601_Snyder_SPTF-1_GFP_L1_rep1_Input_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3601.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep2.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3601:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep1.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3601:rep1.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep1_GFP_GTAT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3601.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3601:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep2-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3601:1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep2_Input_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-2:input:Cele_WS220:modENCODE_3601.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_Input_L1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3601:.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3601:rep1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_Input_L1_combined.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3601:combined.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep2_GFP_CATT.fastq.gz C.elegans/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-2:ChIP:Cele_WS220:modENCODE_3601.fastq.gz raw-seqfile_fastq C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep2.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-2::Cele_WS220:modENCODE_3601.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-2 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_rep1-1.wig.gz C.elegans/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3601:rep1-1.wig.gz coverage-graph_wiggle C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3601 3601_Snyder_SPTF-1_GFP_L1_combined.GFF3.gz C.elegans/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 SPTF-1:Developmental-Stage=Fed-L1-stage-larvae#Strain=OP196#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3601:combined.gff3.gz computed-peaks_gff3 C. elegans Transcriptional Factor ChIP-seq SPTF-1 Fed L1 stage larvae Developmental-Stage=Fed L1 stage larvae#Strain=OP196#temperature=20 degree celsius Rep-1 Cele_WS220 Snyder, M. TF binding sites +3608 3608_SRR166814.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3608:4.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling +3608 3608_SRR166813.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3608:3.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling +3609 3609_SRR166811.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3609:1.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling +3609 3609_SRR166812.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dsim-wildtype:RNA-seq:Rep-1::Dsim:modENCODE_3609:2.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dsim wildtype Rep-1 Dsim Oliver, B. RNA expression profiling +3610 3610_SRR166834.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3610:4.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3610 3610_SRR166835.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3610:5.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3611 3611_SRR166833.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3611:3.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3611 3611_SRR166832.fastq.gz D.mojavensis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dmojavensis:RNA-seq:Rep-1::Dmoj_r1.3:modENCODE_3611:2.fastq.gz raw-seqfile_fastq D. mojavensis mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dmojavensis Rep-1 Dmoj_r1.3 Oliver, B. RNA expression profiling +3613 3613_SRR166836.fastq.gz D.virilis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dvir-wildtype:RNA-seq:Rep-1::Dvir:modENCODE_3613:6.fastq.gz raw-seqfile_fastq D. virilis mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dvir wildtype Rep-1 Dvir Oliver, B. RNA expression profiling +3613 3613_SRR166837.fastq.gz D.virilis/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dvir-wildtype:RNA-seq:Rep-1::Dvir:modENCODE_3613:7.fastq.gz raw-seqfile_fastq D. virilis mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dvir wildtype Rep-1 Dvir Oliver, B. RNA expression profiling +3615 3615_SRR166821.fastq.gz D.yakuba/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dyak-wildtype:RNA-seq:Rep-1::Dyak:modENCODE_3615:1.fastq.gz raw-seqfile_fastq D. yakuba mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dyak wildtype Rep-1 Dyak Oliver, B. RNA expression profiling +3615 3615_SRR166820.fastq.gz D.yakuba/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dyak-wildtype:RNA-seq:Rep-1::Dyak:modENCODE_3615:0.fastq.gz raw-seqfile_fastq D. yakuba mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dyak wildtype Rep-1 Dyak Oliver, B. RNA expression profiling +3617 3617_SRR166824.fastq.gz D.ananassae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dananassae:RNA-seq:Rep-1::Dananassae:modENCODE_3617:4.fastq.gz raw-seqfile_fastq D. ananassae mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dananassae Rep-1 Dananassae Oliver, B. RNA expression profiling +3617 3617_SRR166825.fastq.gz D.ananassae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dananassae:RNA-seq:Rep-1::Dananassae:modENCODE_3617:5.fastq.gz raw-seqfile_fastq D. ananassae mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dananassae Rep-1 Dananassae Oliver, B. RNA expression profiling +3620 3620_SRR166830.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3620:0.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3620 3620_SRR166831.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3620:1.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3621 3621_SRR166828.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3621:8.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3621 3621_SRR166829.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_3621:9.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +3622 3622_SRR166816.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3622:6.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling +3622 3622_SRR166815.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3622:5.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling +3623 3623_SRR166817.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3623:7.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling +3623 3623_SRR166818.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=D.sim-w501:RNA-seq:Rep-1::Dsim:modENCODE_3623:8.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=D.sim w501 Rep-1 Dsim Oliver, B. RNA expression profiling 3624 3624_FP00001_HPL2_N2_L3_1_MA2Cscore.wig.gz C.elegans/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle HPL-2:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3624.wig.gz normalized-arrayfile_wiggle C. elegans Histone Modification ChIP-chip HPL-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement 3624 3624_FP00001_HPL2_N2_L3_2_18251401_IN_532.pair.gz C.elegans/Histone-Modification/ChIP-chip/raw-arrayfile_pair HPL-2:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-2:Cy3-dye:Cele_WS220:modENCODE_3624.pair.gz raw-arrayfile_pair C. elegans Histone Modification ChIP-chip HPL-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-2 Cele_WS220 Lieb, J. Histone modification and replacement 3624 3624_FP00001_HPL2_N2_L3_2_EGS_peaks.gff.gz C.elegans/Histone-Modification/ChIP-chip/computed-peaks_gff3 HPL-2:Developmental-Stage=Larvae-L3-stage#temperature=20-degree-celsius:ChIP-chip:Rep-1::Cele_WS220:modENCODE_3624:2_EGS.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-chip HPL-2 Larvae L3 stage Developmental-Stage=Larvae L3 stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement @@ -8216,38 +8395,38 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3628 3628_DM96_IP1.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=Embryos-0-2-hr#devstage=DevStageFly-Embryo-0-2h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3628.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#devstage=DevStageFly:Embryo 0-2h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication 3628 3628_0-2hr-ORC_57.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=Embryos-0-2-hr#devstage=DevStageFly-Embryo-0-2h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3628:57.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#devstage=DevStageFly:Embryo 0-2h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication 3628 3628_0-2hr-ORC_58.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=Embryos-0-2-hr#devstage=DevStageFly-Embryo-0-2h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3628:58.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#devstage=DevStageFly:Embryo 0-2h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM67.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:67.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM70.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:70.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM69.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:69.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM68_71.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:68_71.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM66_69.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:66_69.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM68.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:68.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM69.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:69.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM71.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:71.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM68.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:68.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM70.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:70.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM71.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:71.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM66.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:66.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM67_70.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:67_70.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM66.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:66.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3630 3630_DM67.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:67.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication -3631 3631_SRR166807.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3631:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3631 3631_SRR166808.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3631:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female Developmental-Stage=Adult Female#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3632 3632_SRR166809.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3632:09.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3632 3632_SRR166810.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3632:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male Developmental-Stage=Adult Male#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling -3633 3633_SRR031708.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:08.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031712.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:12.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031711.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:11.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_S2_DRSC_Untreated-4.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3633:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031715.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3633:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_S2_DRSC_Untreated-3.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031713.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:13.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031709.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:09.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031710.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3633:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_SRR031716.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3633:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure -3633 3633_S2_DRSC_Untreated-1.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3630 3630_DM67.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:67.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM70.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:70.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM69.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:69.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM68_71.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:68_71.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM66_69.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:66_69.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM68.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:68.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM69.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:69.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM71.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:71.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM68.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:68.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM70.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:70.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM71.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:71.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM66.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:66.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM67_70.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:67_70.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM66.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_3630:66.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3630 3630_DM67.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_3630:67.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Replication +3631 3631_SRR166807.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3631:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3631 3631_SRR166808.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3631:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3632 3632_SRR166809.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3632:09.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3632 3632_SRR166810.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dmel-y1w67c23:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3632:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dmel y1w67c23 Rep-1 Dmel_r5.32 Oliver, B. RNA expression profiling +3633 3633_SRR031708.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:08.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031712.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:12.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031711.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:11.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_S2_DRSC_Untreated-4.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3633:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031715.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3633:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_S2_DRSC_Untreated-3.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031713.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:13.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031709.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:09.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031710.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3633:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_SRR031716.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-3::Dmel_r5.32:modENCODE_3633:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +3633 3633_S2_DRSC_Untreated-1.fixed2.sorted.bam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3633.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Untreated-(RNAi-control)#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3663 3663_repset.9702635.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3663.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3663 3663_pirrota__1464_BB2_Input18cycles.1236.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3663:1464_BB2_Input18cycles.1236.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3663 3663_1230.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3663:1230.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -8350,30 +8529,30 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3674 3674_1188.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3674:1188.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3674 3674_repset.12058903.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3674:repset.12058903.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3674 3674_repset.12058903.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3674.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_1588.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675:1588.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_repset.14517070.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_repset.14517070.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675:repset.14517070.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3675:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_1862_Kc5_dMi-2(Q4443).1588.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3675:2_Kc5_dMi-2(Q4443).1588.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_1587.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675:1587.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3675:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3675 3675_1861_Kc4_dMi-2(Q4443).1587.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3675:1_Kc4_dMi-2(Q4443).1587.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_repset.9703856.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_1242.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676:1242.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_pirrota_1509_A20_dMi-2(Q4443).1241.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3676:09_A20_dMi-2(Q4443).1241.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_1241.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676:1241.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_pirrota_1510_A21_dmi-2(Q4443).1242.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3676:10_A21_dmi-2(Q4443).1242.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3676:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_repset.9703856.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676:repset.9703856.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3676 3676_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3676:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3678 3678_pirrota_1873_L3_9-H2AV-9751.1574.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3678:3_L3_9-H2AV-9751.1574.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_1871_L3_9-Input.1572.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3678:1_L3_9-Input.1572.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_1870_L3_5-Input.1571.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3678:0_L3_5-Input.1571.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_repset.14517062.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678:repset.14517062.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_1574.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678:1574.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_1573.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678:1573.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_pirrota_1872_L3_5-H2AV-9751.1573.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3678:2_L3_5-H2AV-9751.1573.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3678 3678_repset.14517062.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2AV:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2AV Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3675 3675_1588.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675:1588.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_repset.14517070.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_repset.14517070.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675:repset.14517070.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3675:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_1862_Kc5_dMi-2(Q4443).1588.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3675:2_Kc5_dMi-2(Q4443).1588.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_1587.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3675:1587.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3675:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3675 3675_1861_Kc4_dMi-2(Q4443).1587.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3675:1_Kc4_dMi-2(Q4443).1587.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_repset.9703856.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_1242.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676:1242.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_pirrota_1509_A20_dMi-2(Q4443).1241.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3676:09_A20_dMi-2(Q4443).1241.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_1241.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676:1241.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_pirrota_1510_A21_dmi-2(Q4443).1242.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3676:10_A21_dmi-2(Q4443).1242.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3676:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_repset.9703856.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3676:repset.9703856.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3676 3676_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dMi-2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3676:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dMi-2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3678 3678_pirrota_1873_L3_9-H2AV-9751.1574.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3678:3_L3_9-H2AV-9751.1574.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_1871_L3_9-Input.1572.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3678:1_L3_9-Input.1572.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_1870_L3_5-Input.1571.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3678:0_L3_5-Input.1571.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_repset.14517062.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678:repset.14517062.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_1574.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678:1574.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_1573.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678:1573.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_pirrota_1872_L3_5-H2AV-9751.1573.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3678:2_L3_5-H2AV-9751.1573.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3678 3678_repset.14517062.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H2Av:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3678.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H2Av Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3679 3679_756.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3679:756.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3679 3679_pirrota__1464_BB2_Input18cycles.1236.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3679:1464_BB2_Input18cycles.1236.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3679 3679_pirrota_984_BB1_H3K27me3.756.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL H3K27me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3679:984_BB1_H3K27me3.756.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip H3K27me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG10159-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -8542,14 +8721,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3699 3699_1577.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K20me1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3699:1577.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K20me1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3699 3699_1871_L3_9-Input.1572.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3699:1_L3_9-Input.1572.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3699 3699_1870_L3_5-Input.1571.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K20me1:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3699:0_L3_5-Input.1571.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K20me1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3700 3700_pirrotta_1682_S19_Input(20cyc).1387.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3700:2_S19_Input(20cyc).1387.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_pirrotta_1681_S18_Input(20cyc).1386.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3700:1_S18_Input(20cyc).1386.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_1403.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700:1403.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_1402.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700:1402.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_Pirrotta_S18_HP1a(M0552).1402.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3700:Pirrotta_S18_HP1a(M0552).1402.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_pirrota__1698_S19_HP1a(MO552).1403.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3700:pirrota__1698_S19_HP1a(MO552).1403.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_repset.13435395.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700:repset.13435395.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3700 3700_repset.13435395.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_pirrotta_1682_S19_Input(20cyc).1387.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3700:2_S19_Input(20cyc).1387.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_pirrotta_1681_S18_Input(20cyc).1386.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3700:1_S18_Input(20cyc).1386.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_1403.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700:1403.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_1402.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700:1402.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_Pirrotta_S18_HP1a(M0552).1402.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3700:Pirrotta_S18_HP1a(M0552).1402.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_pirrota__1698_S19_HP1a(MO552).1403.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3700:pirrota__1698_S19_HP1a(MO552).1403.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_repset.13435395.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700:repset.13435395.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3700 3700_repset.13435395.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3700.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3701 3701_pirrota_1721_L3_HP1a-1_Input(20cyc).1426.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1c:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3701:1_L3_HP1a-1_Input(20cyc).1426.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3701 3701_1436.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3701:1436.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3701 3701_repset.13435397.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1c:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3701:repset.13435397.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1c Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -8598,22 +8777,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3706 3706_pirrota_1170_S3-9L3_1_Input(20cyc).962.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)3-9-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3706:0_S3-9L3_1_Input(20cyc).962.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var)3-9 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3706 3706_959.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)3-9-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3706:959.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var)3-9 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3706 3706_pirrota_1171_S3-9L3_2_Input(20cyc).963.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)3-9-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3706:1_S3-9L3_2_Input(20cyc).963.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var)3-9 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_1610.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707:1610.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_1899_S2-G1_HP1a.1610.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3707:899_S2-G1_HP1a.1610.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_pirrota__1690_S2-G2_Input(20 cyc).1395.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3707:90_S2-G2_Input(20-cyc).1395.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_1900_S2-G2_HP1a.1611.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3707:900_S2-G2_HP1a.1611.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_repset.14517391.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707:repset.14517391.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_pirrota__1689_S2-G1_Input(20 cyc).1394.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3707:89_S2-G1_Input(20-cyc).1394.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_1611.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707:1611.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3707 3707_repset.14517391.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3708:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_pirrota_1756_Kc4_JHDM1-Q2634.1461.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3708:756_Kc4_JHDM1-Q2634.1461.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_pirrota_1582_Kc5_JHDM1-Q2634.1312.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3708:582_Kc5_JHDM1-Q2634.1312.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3708:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_1312.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708:1312.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_repset.10518752.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_1461.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708:1461.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3708 3708_repset.10518752.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708:repset.10518752.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_1610.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707:1610.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_1899_S2-G1_HP1a.1610.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3707:899_S2-G1_HP1a.1610.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_pirrota__1690_S2-G2_Input(20 cyc).1395.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3707:90_S2-G2_Input(20-cyc).1395.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_1900_S2-G2_HP1a.1611.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3707:900_S2-G2_HP1a.1611.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_repset.14517391.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707:repset.14517391.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_pirrota__1689_S2-G1_Input(20 cyc).1394.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3707:89_S2-G1_Input(20-cyc).1394.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_1611.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707:1611.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3707 3707_repset.14517391.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3707.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3708:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_pirrota_1756_Kc4_JHDM1-Q2634.1461.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3708:756_Kc4_JHDM1-Q2634.1461.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_pirrota_1582_Kc5_JHDM1-Q2634.1312.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3708:582_Kc5_JHDM1-Q2634.1312.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3708:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_1312.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708:1312.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_repset.10518752.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_1461.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708:1461.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3708 3708_repset.10518752.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JHDM1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3708:repset.10518752.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JHDM1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3709 3709_pirrota_1183_L3_male1_Input(20cyc).979.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3709:83_L3_male1_Input(20cyc).979.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3709 3709_1076.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3709:1076.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3709 3709_pirrota_1324_L3_Male1_POF.1076.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3709:4_L3_Male1_POF.1076.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -8622,38 +8801,38 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3709 3709_repset.9700958.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3709.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3709 3709_1077.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3709:1077.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3709 3709_repset.9700958.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3709:repset.9700958.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_pirrota_1769_Kc5_POF.1474.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3710:9_Kc5_POF.1474.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3710:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_repset.14517059.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710:repset.14517059.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_1474.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710:1474.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_1473.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710:1473.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3710:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_repset.14517059.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3710 3710_pirrota_1768_kc4_POF.1473.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3710:8_kc4_POF.1473.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_Pirrotta_1695_HP1c_L3-1_RNA Pol II.1400.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3711:Pirrotta_1695_HP1c_L3-1_RNA-Pol-II.1400.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_repset.13435400.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711:repset.13435400.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_pirrota_1491_HP1cL3-1_Input(20cyc).1213.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3711:1_HP1cL3-1_Input(20cyc).1213.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_1401.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711:1401.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_1400.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711:1400.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_pirrota__1696_HP1c_L3_2_RNAPol II.1401.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3711:pirrota__1696_HP1c_L3_2_RNAPol-II.1401.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_repset.13435400.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3711 3711_pirrota_1492_HP1cL3-2_Input(20cyc).1214.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3711:2_HP1cL3-2_Input(20cyc).1214.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_Pirrotta_1702_S2_E2_RNA Pol II.1407.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3712:2_S2_E2_RNA-Pol-II.1407.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_repset.13435398.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_1407.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712:1407.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_Pirrotta_1701_S2_E1_RNA Pol II.1406.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3712:1_S2_E1_RNA-Pol-II.1406.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_pirrota__1687_S2-E_Input(20 cyc).1392.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3712:7_S2-E_Input(20-cyc).1392.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_repset.13435398.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712:repset.13435398.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_1406.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712:1406.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3712 3712_pirrota__1688_S2-E2_Input(20 cyc).1393.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3712:8_S2-E2_Input(20-cyc).1393.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_repset.13435393.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_1409.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713:1409.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_1408.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713:1408.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_pirrota__1690_S2-G2_Input(20 cyc).1395.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3713:90_S2-G2_Input(20-cyc).1395.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_pirrota__1689_S2-G1_Input(20 cyc).1394.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3713:89_S2-G1_Input(20-cyc).1394.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_Pirrotta_1703_S2_G1_RNA Pol II.1408.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3713:Pirrotta_1703_S2_G1_RNA-Pol-II.1408.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_repset.13435393.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713:repset.13435393.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3713 3713_pirrota__1704_S2-G2_RNA Pol II.1409.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3713:pirrota__1704_S2-G2_RNA-Pol-II.1409.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_pirrota_1769_Kc5_POF.1474.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3710:9_Kc5_POF.1474.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3710:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_repset.14517059.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710:repset.14517059.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_1474.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710:1474.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_1473.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710:1473.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3710:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_repset.14517059.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3710.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3710 3710_pirrota_1768_kc4_POF.1473.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3710:8_kc4_POF.1473.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_Pirrotta_1695_HP1c_L3-1_RNA Pol II.1400.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3711:Pirrotta_1695_HP1c_L3-1_RNA-Pol-II.1400.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_repset.13435400.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711:repset.13435400.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_pirrota_1491_HP1cL3-1_Input(20cyc).1213.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3711:1_HP1cL3-1_Input(20cyc).1213.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_1401.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711:1401.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_1400.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711:1400.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_pirrota__1696_HP1c_L3_2_RNAPol II.1401.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3711:pirrota__1696_HP1c_L3_2_RNAPol-II.1401.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_repset.13435400.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3711.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3711 3711_pirrota_1492_HP1cL3-2_Input(20cyc).1214.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1c-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3711:2_HP1cL3-2_Input(20cyc).1214.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1c mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_Pirrotta_1702_S2_E2_RNA Pol II.1407.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3712:2_S2_E2_RNA-Pol-II.1407.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_repset.13435398.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_1407.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712:1407.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_Pirrotta_1701_S2_E1_RNA Pol II.1406.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3712:1_S2_E1_RNA-Pol-II.1406.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_pirrota__1687_S2-E_Input(20 cyc).1392.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3712:7_S2-E_Input(20-cyc).1392.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_repset.13435398.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712:repset.13435398.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_1406.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3712:1406.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3712 3712_pirrota__1688_S2-E2_Input(20 cyc).1393.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3712:8_S2-E2_Input(20-cyc).1393.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG12196-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_repset.13435393.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_1409.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713:1409.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_1408.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713:1408.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_pirrota__1690_S2-G2_Input(20 cyc).1395.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3713:90_S2-G2_Input(20-cyc).1395.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_pirrota__1689_S2-G1_Input(20 cyc).1394.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3713:89_S2-G1_Input(20-cyc).1394.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_Pirrotta_1703_S2_G1_RNA Pol II.1408.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3713:Pirrotta_1703_S2_G1_RNA-Pol-II.1408.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_repset.13435393.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3713:repset.13435393.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3713 3713_pirrota__1704_S2-G2_RNA Pol II.1409.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3713:pirrota__1704_S2-G2_RNA-Pol-II.1409.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-GFP-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3714 3714_1264.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3714:1264.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3714 3714_repset.9703025.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3714.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3714 3714_pirrota_1493_BCP2_SuHw-HB.1264.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3714:1493_BCP2_SuHw-HB.1264.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -8697,54 +8876,54 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3718 3718_repset.9274434.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3718:repset.9274434.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3718 3718_pirrota_706_BS1_Input-18cycles.497.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3718:706_BS1_Input-18cycles.497.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3718 3718_460.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3718:460.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG8573-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_pirrota_1544_SL1_Input-18cycles.1303.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3719:544_SL1_Input-18cycles.1303.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_pirrota_1623_SL2_Su(Hw)-HB.1327.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3719:623_SL2_Su(Hw)-HB.1327.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_1327.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719:1327.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_repset.11436076.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719:repset.11436076.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_repset.11436076.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_1295.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719:1295.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_pirrota_1621_SL2_Input.1325.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3719:621_SL2_Input.1325.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3719 3719_pirrota_1536_SL1_SuHw-HB.1295.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3719:536_SL1_SuHw-HB.1295.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3726 3726_AF16_EE-2.raw_covg.cbri225.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3726:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3726 3726_AF16_EE-2.cbri225.alignments.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3726.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3726 3726_SRR327139.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3726:9.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3726 3726_SRR327138.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3726:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3726 3726_AF16_EE-2.win_covg.cbri225.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3726:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3727 3727_SRR149189.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3727.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3727 3727_AF16_L2-1.win_covg.cbri225.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3727:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3727 3727_AF16_L2-1.cbri225.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3727.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3727 3727_AF16_L2-1.raw_covg.cbri225.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3727:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3729 3729_AF16_YA-1.cbri225.alignments.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3729.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3729 3729_SRR327331.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3729:1.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3729 3729_SRR327332.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3729:2.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3729 3729_AF16_YA-1.raw_covg.cbri225.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3729:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3729 3729_AF16_YA-1.win_covg.cbri225.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3729:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3719 3719_pirrota_1544_SL1_Input-18cycles.1303.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3719:544_SL1_Input-18cycles.1303.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_pirrota_1623_SL2_Su(Hw)-HB.1327.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3719:623_SL2_Su(Hw)-HB.1327.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_1327.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719:1327.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_repset.11436076.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719:repset.11436076.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_repset.11436076.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_1295.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3719:1295.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_pirrota_1621_SL2_Input.1325.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3719:621_SL2_Input.1325.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3719 3719_pirrota_1536_SL1_SuHw-HB.1295.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3719:536_SL1_SuHw-HB.1295.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=Fly-LacZ-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3726 3726_AF16_EE-2.raw_covg.cbri225.wig.gz C.briggsae/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3726:raw.wig.gz coverage-graph_wiggle C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3726 3726_AF16_EE-2.cbri225.alignments.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3726.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3726 3726_SRR327139.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3726:9.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3726 3726_SRR327138.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3726:8.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3726 3726_AF16_EE-2.win_covg.cbri225.wig.gz C.briggsae/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3726:win.wig.gz coverage-graph_wiggle C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3727 3727_SRR149189.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3727.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3727 3727_AF16_L2-1.win_covg.cbri225.wig.gz C.briggsae/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3727:win.wig.gz coverage-graph_wiggle C. briggsae mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3727 3727_AF16_L2-1.cbri225.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3727.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3727 3727_AF16_L2-1.raw_covg.cbri225.wig.gz C.briggsae/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-L2-1-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3727:raw.wig.gz coverage-graph_wiggle C. briggsae mRNA RNA-seq total-RNA AF16 L2-1 stage larvae Developmental-Stage=AF16 L2-1 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3729 3729_AF16_YA-1.cbri225.alignments.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3729.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3729 3729_SRR327331.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3729:1.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3729 3729_SRR327332.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3729:2.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3729 3729_AF16_YA-1.raw_covg.cbri225.wig.gz C.briggsae/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3729:raw.wig.gz coverage-graph_wiggle C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +3729 3729_AF16_YA-1.win_covg.cbri225.wig.gz C.briggsae/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_3729:win.wig.gz coverage-graph_wiggle C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure 3733 3733_DSN-Negative-Positive.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3733:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3733 3733_SRR317082.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3733.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3733 3733_DSN-Negative-Positive.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3733:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3733 3733_DSN-Negative-Positive.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3733.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3741 3741_V148.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3741:148.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3741 3741_V073.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3741:073.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3742 3742_V147.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3742:147.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3742 3742_V026.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3742:026.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3743 3743_V135.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3743:13.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3743 3743_V085.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3743:08.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling -3744 3744_1331.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744:1331.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_repset.11436075.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744:repset.11436075.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_pirrota_1626_Kc5_Input.1330.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3744:6_Kc5_Input.1330.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_pirrota_1627_Kc5_ASH1-Q4177.1331.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3744:7_Kc5_ASH1-Q4177.1331.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_1329.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744:1329.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_repset.11436075.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_pirrota_1624_Kc4_Input.1328.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3744:4_Kc4_Input.1328.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3744 3744_pirrota_1625_Kc4_ASH1-Q4177.1329.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3744:5_Kc4_ASH1-Q4177.1329.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_1977_Kc12_beaf.1781.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3745:1977_Kc12_beaf.1781.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_repset.15664087.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745:repset.15664087.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_2036_Kc11_BEAF.1873.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3745:2036_Kc11_BEAF.1873.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3745:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_1873.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745:1873.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3745:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_repset.15664087.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3745 3745_1781.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745:1781.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3741 3741_V148.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3741:148.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3741 3741_V073.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3741:073.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3742 3742_V147.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3742:147.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3742 3742_V026.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3742:026.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3743 3743_V135.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3743:13.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3743 3743_V085.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3743:08.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +3744 3744_1331.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744:1331.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_repset.11436075.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744:repset.11436075.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_pirrota_1626_Kc5_Input.1330.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3744:6_Kc5_Input.1330.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_pirrota_1627_Kc5_ASH1-Q4177.1331.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3744:7_Kc5_ASH1-Q4177.1331.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_1329.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744:1329.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_repset.11436075.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3744.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_pirrota_1624_Kc4_Input.1328.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3744:4_Kc4_Input.1328.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3744 3744_pirrota_1625_Kc4_ASH1-Q4177.1329.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ASH-1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3744:5_Kc4_ASH1-Q4177.1329.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ASH-1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_1977_Kc12_beaf.1781.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3745:1977_Kc12_beaf.1781.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_repset.15664087.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745:repset.15664087.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_2036_Kc11_BEAF.1873.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3745:2036_Kc11_BEAF.1873.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3745:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_1873.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745:1873.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3745:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_repset.15664087.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3745 3745_1781.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle BEAF-32:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3745:1781.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip BEAF-32 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3746 3746_pirrota_338_E5_Chro(Chriz)WR.166.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3746:38_E5_Chro(Chriz)WR.166.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3746 3746_pirrota_345_E7_Input.173.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Chriz:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3746:5_E7_Input.173.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3746 3746_repset.4161795.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Chriz:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3746:repset.4161795.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Chriz Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -8763,60 +8942,60 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3747 3747_pirrota__1456_BCP2_CP190.1228.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3747:1456_BCP2_CP190.1228.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3747 3747_700.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3747:700.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3747 3747_repset.9702636.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3747.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#RNAi-reagent=CG6384-RNAi#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_repset.15664099.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748:repset.15664099.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3748:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_2033_Kc11_CP190.1870.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3748:2033_Kc11_CP190.187.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_repset.15664099.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_1870.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748:1870.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3748:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_1780.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748:1780.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3748 3748_pirrota_1983_Kc12_CP190_HB.1780.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3748:pirrota_1983_Kc12_CP190_HB.178.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3749:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_1980_Kc12_CTCF.1777.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3749:1980_Kc12_CTCF.1777.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_repset.15664091.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_1872.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749:1872.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_repset.15664091.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749:repset.15664091.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_2035.Kc11_CTCF.1872.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3749:2035.Kc11_CTCF.1872.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_1777.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749:1777.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3749 3749_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3749:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_1957_Kc11_dRING-q3200.1751.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3750:7_Kc11_dRING-q3200.1751.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_repset.15303267.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_1674.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750:1674.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_repset.15303267.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750:repset.15303267.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_1951_Kc5_Input.1671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3750:1951_Kc5_Input.1671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_1954_Kc5_dRing-Q3200.1674.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3750:4_Kc5_dRing-Q3200.1674.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_1751.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750:1751.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3750 3750_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3750:pirrota_1956_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_repset.9273388.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:repset.9273388.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_2093_S2_dSFMBT-Q2642.1917.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:2093_S2_dSFMBT-Q2642.1917.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_1321.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:1321.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_pirrota_1970_S19 dSFMBT-Q2642.1765.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:pirrota_1970_S19-dSFMBT-Q2642.1765.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_pirrota_1617_S19_dSFMBT-Q2642.1321.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:pirrota_1617_S19_dSFMBT-Q2642.1321.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_pirrota_1615_S19_Input.1319.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:pirrota_1615_S19_Input.1319.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_2029_A22_INPUT.1883.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:2029_A22_INPUT.1883.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_1917.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:1917.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_pirrota_893_S15_SSFMBT.664.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:pirrota_893_S15_SSFMBT.664.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_repset.9273388.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_pirrota_1969_S19_Input.1764.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:pirrota_1969_S19_Input.1764.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_1765.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:1765.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_664.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:664.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3751 3751_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:pirrota_873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3752:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3752:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_1760.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752:1760.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_1752.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752:1752.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_repset.15303266.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_pirrota_1965_Kc4 E (Z)-Q3149.1760.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3752:pirrota_1965_Kc4-E-(Z)-Q3149.1760.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_repset.15303266.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752:repset.15303266.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3752 3752_1958_Kc11_EZ-Q3419.1752.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL E(Z):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3752:1958_Kc11_EZ-Q3419.1752.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip E(Z) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_1779.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753:1779.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_repset.15664098.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753:repset.15664098.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_repset.15664098.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3753:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_1868.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753:1868.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_2031_Kc11_GAF.1868.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3753:2031_Kc11_GAF.1868.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_1982_Kc12_GAF.1779.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3753:1982_Kc12_GAF.1779.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3753 3753_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3753:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_repset.15664099.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748:repset.15664099.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3748:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_2033_Kc11_CP190.1870.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3748:2033_Kc11_CP190.187.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_repset.15664099.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_1870.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748:1870.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3748:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_1780.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3748:1780.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3748 3748_pirrota_1983_Kc12_CP190_HB.1780.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CP190:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3748:pirrota_1983_Kc12_CP190_HB.178.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CP190 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3749:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_1980_Kc12_CTCF.1777.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3749:1980_Kc12_CTCF.1777.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_repset.15664091.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_1872.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749:1872.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_repset.15664091.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749:repset.15664091.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_2035.Kc11_CTCF.1872.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3749:2035.Kc11_CTCF.1872.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_1777.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3749:1777.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3749 3749_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CTCF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3749:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CTCF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_1957_Kc11_dRING-q3200.1751.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3750:7_Kc11_dRING-q3200.1751.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_repset.15303267.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_1674.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750:1674.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_repset.15303267.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750:repset.15303267.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_1951_Kc5_Input.1671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3750:1951_Kc5_Input.1671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_1954_Kc5_dRing-Q3200.1674.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3750:4_Kc5_dRing-Q3200.1674.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_1751.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3750:1751.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3750 3750_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dRING:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3750:pirrota_1956_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dRING Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_repset.9273388.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:repset.9273388.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_2093_S2_dSFMBT-Q2642.1917.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:2093_S2_dSFMBT-Q2642.1917.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_1321.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:1321.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_pirrota_1970_S19 dSFMBT-Q2642.1765.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:pirrota_1970_S19-dSFMBT-Q2642.1765.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_pirrota_1617_S19_dSFMBT-Q2642.1321.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:pirrota_1617_S19_dSFMBT-Q2642.1321.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_pirrota_1615_S19_Input.1319.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:pirrota_1615_S19_Input.1319.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_2029_A22_INPUT.1883.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:2029_A22_INPUT.1883.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_1917.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:1917.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_pirrota_893_S15_SSFMBT.664.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3751:pirrota_893_S15_SSFMBT.664.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_repset.9273388.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_pirrota_1969_S19_Input.1764.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:pirrota_1969_S19_Input.1764.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_1765.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:1765.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_664.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3751:664.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3751 3751_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dSFMBT:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3751:pirrota_873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dSFMBT Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3752:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3752:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_1760.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752:1760.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_1752.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752:1752.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_repset.15303266.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_pirrota_1965_Kc4 E (Z)-Q3149.1760.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3752:pirrota_1965_Kc4-E-(Z)-Q3149.1760.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_repset.15303266.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3752:repset.15303266.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3752 3752_1958_Kc11_EZ-Q3419.1752.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Enhancer-of-zeste:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3752:1958_Kc11_EZ-Q3419.1752.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Enhancer-of-zeste Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_1779.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753:1779.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_repset.15664098.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753:repset.15664098.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_repset.15664098.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3753:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_1868.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3753:1868.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_2031_Kc11_GAF.1868.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3753:2031_Kc11_GAF.1868.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_1982_Kc12_GAF.1779.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3753:1982_Kc12_GAF.1779.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3753 3753_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL GAF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3753:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip GAF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3754 3754_1129.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3754:1129.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3754 3754_pirrota_1313_Elate8_Input(14cyc).1065.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3754:1313_Elate8_Input(14cyc).1065.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3754 3754_pirrota_880_E late 2_Input.651.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3754:880_E-late-2_Input.651.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -8828,17 +9007,17 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3754 3754_pirrota_944_Elate2_H3K18ac.698.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K18ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3754:944_Elate2_H3K18ac.698.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K18ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3754 3754_698.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K18ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3754:698.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K18ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3754 3754_repset.9274436.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K18ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3754.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K18ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_pirrota_1020_CI8-2_H3K23ac.787.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3755:1020_CI8-2_H3K23ac.787.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_619.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:619.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_787.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:787.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_repset.8061135.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:repset.8061135.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_pirrota_836_CL8-1_Input_DNA(14cyc).607.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3755:36_CL8-1_Input_DNA(14cyc).607.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3755:26_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_pirrota_848_CL8-2_H3K23ac.619.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3755:848_CL8-2_H3K23ac.619.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_630.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:630.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_pirrota_837_CL8-2_Input_DNA(14cyc).608.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3755:37_CL8-2_Input_DNA(14cyc).608.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_repset.8061135.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3755 3755_pirrota_859_CI8-1_H3K923ac.630.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3755:859_CI8-1_H3K923ac.630.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_pirrota_1020_CI8-2_H3K23ac.787.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3755:1020_CI8-2_H3K23ac.787.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_619.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:619.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_787.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:787.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_repset.8061135.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:repset.8061135.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_pirrota_836_CL8-1_Input_DNA(14cyc).607.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3755:36_CL8-1_Input_DNA(14cyc).607.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_pirrota_826_CL8-2_Input_DNA(20cyc).597.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3755:26_CL8-2_Input_DNA(20cyc).597.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_pirrota_848_CL8-2_H3K23ac.619.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3755:848_CL8-2_H3K23ac.619.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_630.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755:630.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_pirrota_837_CL8-2_Input_DNA(14cyc).608.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3755:37_CL8-2_Input_DNA(14cyc).608.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_repset.8061135.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3755.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3755 3755_pirrota_859_CI8-1_H3K923ac.630.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3755:859_CI8-1_H3K923ac.630.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3756 3756_1814.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3756:1814.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3756 3756_2016_Head9_OR_H3K23ac.1813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3756:6_Head9_OR_H3K23ac.1813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3756 3756_2017_Head10_OR_H3K23ac.1814.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3756:7_Head10_OR_H3K23ac.1814.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -8847,22 +9026,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3756 3756_1992_Head9_OR_input.1789.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3756:2_Head9_OR_input.1789.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3756 3756_1993_Head10_OR_input.1790.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K23ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3756:3_Head10_OR_input.1790.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K23ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3756 3756_repset.15663113.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K23ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3756:repset.15663113.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K23ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_1874.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757:1874.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_2037.Kc11_H3K27Ac.1874.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3757:2037.Kc11_H3K27Ac.1874.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_repset.15664092.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3757:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_repset.15664092.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757:repset.15664092.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3757:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_1783.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757:1783.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3757 3757_pirrota_1985_Kc12 H3K27AC-AR-0105-50.1783.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3757:pirrota_1985_Kc12-H3K27AC-AR-0105-50.1783.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_pirrota_1967_Kc4 H3K27me2.1762.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3758:pirrota_1967_Kc4-H3K27me2.1762.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_2094_Kc12_H3K27me2-ab24684.1918.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3758:2094_Kc12_H3K27me2-ab24684.1918.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3758:61_Kc4_Input.175.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_repset.16023714.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_1918.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758:1918.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_1762.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758:1762.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_repset.16023714.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758:repset.16023714.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3758 3758_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3758:79_Kc12_INPUT.177.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_1874.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757:1874.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_2037.Kc11_H3K27Ac.1874.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3757:2037.Kc11_H3K27Ac.1874.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_repset.15664092.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3757:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_repset.15664092.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757:repset.15664092.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3757:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_1783.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3757:1783.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3757 3757_pirrota_1985_Kc12 H3K27AC-AR-0105-50.1783.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3757:pirrota_1985_Kc12-H3K27AC-AR-0105-50.1783.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_pirrota_1967_Kc4 H3K27me2.1762.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3758:pirrota_1967_Kc4-H3K27me2.1762.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_2094_Kc12_H3K27me2-ab24684.1918.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3758:2094_Kc12_H3K27me2-ab24684.1918.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3758:61_Kc4_Input.175.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_repset.16023714.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_1918.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758:1918.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_1762.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758:1762.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_repset.16023714.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3758:repset.16023714.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3758 3758_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3758:79_Kc12_INPUT.177.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3759 3759_pirrota_1989_L3 HP1a-3 input.1786.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3759:989_L3-HP1a-3-input.1786.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3759 3759_pirrota_1721_L3_HP1a-1_Input(20cyc).1426.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3759:721_L3_HP1a-1_Input(20cyc).1426.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3759 3759_2003.L3_HP1a_3_H3K36me3.1800.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3759:2003.L3_HP1a_3_H3K36me3.1800.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -8874,38 +9053,38 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3759 3759_1759_L3_HP1a_H3K36me3.1464.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3759:1759_L3_HP1a_H3K36me3.1464.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3759 3759_1800.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K36me3:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3759:1800.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3759 3759_pirrota_1722_L3_HP1a-2_Input(20cyc).1427.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K36me3:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3759:722_L3_HP1a-2_Input(20cyc).1427.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K36me3 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_repset.15303263.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760:repset.15303263.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_repset.15303263.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_1770.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760:1770.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_1973_Kc11_H3K4Me1-Ab8895.1770.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3760:73_Kc11_H3K4Me1-Ab8895.1770.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3760:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_1962_Kc4 H3K4me1-ab8895.1757.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3760:62_Kc4-H3K4me1-ab8895.1757.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3760:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3760 3760_1757.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760:1757.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_repset.15664090.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_1964_Kc4 H3K4me3-ab8580.1759.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3761:1964_Kc4-H3K4me3-ab8580.1759.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_repset.15664090.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761:repset.15664090.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_pirrota_1975_Kc11_H3K4me3-ab8580.1772.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3761:pirrota_1975_Kc11_H3K4me3-ab8580.1772.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_1772.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761:1772.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3761:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3761:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3761 3761_1759.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761:1759.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_repset.15303262.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762:repset.15303262.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_1784.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762:1784.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_1976_Kc11_H3K79Me1-ab2886.1773.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3762:1976_Kc11_H3K79Me1-ab2886.1773.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_1773.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762:1773.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3762:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_repset.15303262.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_pirrota_1986_Kc12 H3K79me1-Ab2886-100.1784.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3762:pirrota_1986_Kc12-H3K79me1-Ab2886-100.1784.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3762 3762_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3762:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_1774.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763:1774.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_repset.15664096.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763:repset.15664096.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3763:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_repset.15664096.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_2042.Kc11_H3K79Me2-ab3594.1774.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3763:2.Kc11_H3K79Me2-ab3594.1774.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3763:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_2040_Kc12_H3K79me2-ab3594-25.1877.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3763:0_Kc12_H3K79me2-ab3594-25.1877.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3763 3763_1877.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763:1877.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_repset.15303263.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760:repset.15303263.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_repset.15303263.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_1770.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760:1770.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_1973_Kc11_H3K4Me1-Ab8895.1770.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3760:73_Kc11_H3K4Me1-Ab8895.1770.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3760:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_1962_Kc4 H3K4me1-ab8895.1757.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3760:62_Kc4-H3K4me1-ab8895.1757.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3760:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3760 3760_1757.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3760:1757.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_repset.15664090.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_1964_Kc4 H3K4me3-ab8580.1759.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3761:1964_Kc4-H3K4me3-ab8580.1759.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_repset.15664090.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761:repset.15664090.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_pirrota_1975_Kc11_H3K4me3-ab8580.1772.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3761:pirrota_1975_Kc11_H3K4me3-ab8580.1772.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_1772.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761:1772.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3761:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3761:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3761 3761_1759.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K4me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3761:1759.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K4me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_repset.15303262.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762:repset.15303262.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_1784.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762:1784.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_1976_Kc11_H3K79Me1-ab2886.1773.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3762:1976_Kc11_H3K79Me1-ab2886.1773.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_1773.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762:1773.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3762:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_repset.15303262.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3762.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_pirrota_1986_Kc12 H3K79me1-Ab2886-100.1784.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3762:pirrota_1986_Kc12-H3K79me1-Ab2886-100.1784.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3762 3762_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3762:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_1774.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763:1774.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_repset.15664096.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763:repset.15664096.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3763:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_repset.15664096.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_2042.Kc11_H3K79Me2-ab3594.1774.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3763:2.Kc11_H3K79Me2-ab3594.1774.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3763:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_2040_Kc12_H3K79me2-ab3594-25.1877.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3763:0_Kc12_H3K79me2-ab3594-25.1877.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3763 3763_1877.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3763:1877.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3764 3764_repset.9700431.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3764.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3764 3764_pirrota_1313_Elate8_Input(14cyc).1065.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3764:pirrota_1313_Elate8_Input(14cyc).1065.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3764 3764_pirrota_1312_Elate7_Input(14cyc).1064.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3764:pirrota_1312_Elate7_Input(14cyc).1064.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -8917,17 +9096,17 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3764 3764_pirrota_2006_EL6_H3K9ac.1803.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3764:2006_EL6_H3K9ac.1803.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3764 3764_1060.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3764:1060.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3764 3764_1059.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3764:1059.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_pirrota_424_B1_Input.250.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3765:424_B1_Input.250.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_557.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:557.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_pirrota_797_B5_Input(14cyc).564.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3765:797_B5_Input(14cyc).564.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_pirrota_423_B2_H3K9ac.249.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3765:423_B2_H3K9ac.249.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_249.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:249.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_repset.4162472.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:repset.4162472.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_pirrota_421_B1_H3K9ac.247.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3765:421_B1_H3K9ac.247.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_repset.4162472.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_pirrota_790_B5_H3K9ac.557.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3765:790_B5_H3K9ac.557.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_pirrota_425_B2_Input.251.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3765:425_B2_Input.251.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3765 3765_247.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:247.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_pirrota_424_B1_Input.250.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3765:424_B1_Input.250.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_557.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:557.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_pirrota_797_B5_Input(14cyc).564.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3765:797_B5_Input(14cyc).564.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_pirrota_423_B2_H3K9ac.249.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3765:423_B2_H3K9ac.249.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_249.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:249.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_repset.4162472.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:repset.4162472.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_pirrota_421_B1_H3K9ac.247.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3765:421_B1_H3K9ac.247.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_repset.4162472.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_pirrota_790_B5_H3K9ac.557.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3765:790_B5_H3K9ac.557.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_pirrota_425_B2_Input.251.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3765:425_B2_Input.251.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3765 3765_247.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3765:247.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3766 3766_pirrota_2008_Head9 OR H3K9ac.1805.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3766:8_Head9-OR-H3K9ac.1805.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3766 3766_repset.15663119.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3766:repset.15663119.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3766 3766_1806.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9ac:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3766:1806.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9ac Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -8944,32 +9123,32 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3767 3767_1808.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3767:1808.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3767 3767_pirrota_2011_Head 10 OR H3K9acS10P.1808.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9acS10P:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3767:1_Head-10-OR-H3K9acS10P.1808.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9acS10P Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3767 3767_repset.15663112.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9acS10P:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3767:repset.15663112.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9acS10P Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_271.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768:271.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_pirrota_448_B1_H3K9me1.270.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3768:8_B1_H3K9me1.270.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_repset.4162512.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_pirrota_449_B2_H3K9me1.271.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3768:9_B2_H3K9me1.271.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_pirrota_425_B2_Input.251.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3768:5_B2_Input.251.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_pirrota_424_B1_Input.250.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3768:4_B1_Input.250.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_270.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768:270.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3768 3768_repset.4162512.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768:repset.4162512.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_repset.14910811.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_1947_Kc11_Input.1703.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3769:7_Kc11_Input.1703.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_repset.14910811.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769:repset.14910811.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_1693.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769:1693.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_pirrota_1944_Kc12_H3k9me1.1693.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3769:pirrota_1944_Kc12_H3k9me1.1693.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_1948_KC12_Input.1704.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3769:8_KC12_Input.1704.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_1943_KC11_H3K9mel.1692.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3769:1943_KC11_H3K9mel.1692.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3769 3769_1692.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769:1692.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_pirrota_383_S12_H3K9me1.200.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3770:383_S12_H3K9me1.200.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_repset.3506201.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:repset.3506201.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_pirrota_232_S12_H3K9me1.82.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3770:232_S12_H3K9me1.82.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_repset.3506201.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_200.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:200.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_pirrota_191_S9_H3K9me1.41.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3770:191_S9_H3K9me1.41.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_82.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:82.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3770:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_pirrota_196_S9_Input.46.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3770:196_S9_Input.46.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3770 3770_41.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:41.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_271.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768:271.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_pirrota_448_B1_H3K9me1.270.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3768:8_B1_H3K9me1.270.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_repset.4162512.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_pirrota_449_B2_H3K9me1.271.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3768:9_B2_H3K9me1.271.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_pirrota_425_B2_Input.251.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3768:5_B2_Input.251.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_pirrota_424_B1_Input.250.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3768:4_B1_Input.250.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_270.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768:270.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3768 3768_repset.4162512.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3768:repset.4162512.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_repset.14910811.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_1947_Kc11_Input.1703.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3769:7_Kc11_Input.1703.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_repset.14910811.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769:repset.14910811.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_1693.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769:1693.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_pirrota_1944_Kc12_H3k9me1.1693.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3769:pirrota_1944_Kc12_H3k9me1.1693.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_1948_KC12_Input.1704.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3769:8_KC12_Input.1704.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_1943_KC11_H3K9mel.1692.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3769:1943_KC11_H3K9mel.1692.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3769 3769_1692.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3769:1692.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_pirrota_383_S12_H3K9me1.200.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3770:383_S12_H3K9me1.200.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_repset.3506201.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:repset.3506201.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_pirrota_232_S12_H3K9me1.82.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3770:232_S12_H3K9me1.82.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_repset.3506201.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_200.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:200.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_pirrota_191_S9_H3K9me1.41.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3770:191_S9_H3K9me1.41.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_82.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:82.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3770:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_pirrota_196_S9_Input.46.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3770:196_S9_Input.46.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3770 3770_41.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3770:41.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3771 3771_repset.13435399.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3771.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3771 3771_1431.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3771:1431.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3771 3771_1725.L3-HP1a-1-H3K9me2.1430.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3771:1725.L3-HP1a-1-H3K9me2.1430.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -9021,14 +9200,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3776 3776_1418.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H4K16ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3776:1418.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3776 3776_pirrota_1743_L3-7_H4K16ac.1418.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3776:pirrota_1743_L3-7_H4K16ac.1418.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3776 3776_1786.L3-8-H3K16ac.1491.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H4K16ac:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3776:1786.L3-8-H3K16ac.1491.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H4K16ac Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3777 3777_repset.15303264.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777:repset.15303264.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_pirrotta_1682_S19_Input(20cyc).1387.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3777:2_S19_Input(20cyc).1387.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_1685.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777:1685.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_1987_S18_HP1a Hinge.1684.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3777:87_S18_HP1a-Hinge.1684.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_1936_S19_HP1a.hinge.1685.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3777:36_S19_HP1a.hinge.1685.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_pirrotta_1681_S18_Input(20cyc).1386.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3777:1_S18_Input(20cyc).1386.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_repset.15303264.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3777 3777_1684.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777:1684.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_repset.15303264.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777:repset.15303264.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_pirrotta_1682_S19_Input(20cyc).1387.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3777:2_S19_Input(20cyc).1387.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_1685.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777:1685.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_1987_S18_HP1a Hinge.1684.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3777:87_S18_HP1a-Hinge.1684.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_1936_S19_HP1a.hinge.1685.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3777:36_S19_HP1a.hinge.1685.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_pirrotta_1681_S18_Input(20cyc).1386.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3777:1_S18_Input(20cyc).1386.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_repset.15303264.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3777 3777_1684.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3777:1684.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3778 3778_2055.Head 9_OR_HP1b.1856.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3778:5.Head-9_OR_HP1b.1856.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3778 3778_1857.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3778:1857.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3778 3778_repset.15664097.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3778.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -9071,86 +9250,86 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3782 3782_1680.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3782:1680.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3782 3782_repset.14910807.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3782:repset.14910807.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3782 3782_1932_L3_13_HP4.1680.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3782:2_L3_13_HP4.1680.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_repset.14910806.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_repset.14910806.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783:repset.14910806.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_1644.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783:1644.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_pirrota_1917_B4-INPUT.1642.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3783:7_B4-INPUT.1642.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_pirrota_1918_B9-INPUT.1643.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3783:8_B9-INPUT.1643.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_pirrota_1919_B4-JMJD2A-KDM4A-Q2541.1644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3783:19_B4-JMJD2A-KDM4A-Q2541.1644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_1645.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783:1645.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3783 3783_pirrota_1920_B9-JMJD2A-KDM4A-Q2541.1645.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3783:20_B9-JMJD2A-KDM4A-Q2541.1645.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_pirrota_803_A14.input.566.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3784:803_A14.input.566.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_repset.8061131.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_repset.8061131.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784:repset.8061131.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_624.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784:624.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_457.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784:457.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_pirrota_765_S12_JMJD2A-41.457.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3784:765_S12_JMJD2A-41.457.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_pirrota_853_A14.JHJD2A-41.624.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3784:853_A14.JHJD2A-41.624.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3784 3784_pirrota_641_S12_input_gk2.417.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3784:641_S12_input_gk2.417.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_pirrota_2020_B4_LSD1-Q3430.1830.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3785:pirrota_2020_B4_LSD1-Q3430.1830.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_repset.15663114.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_2021_B9_LSD1-Q3430.1831.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3785:2021_B9_LSD1-Q3430.1831.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_pirrota_1917_B4-INPUT.1642.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3785:7_B4-INPUT.1642.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_1830.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785:1830.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_pirrota_1918_B9-INPUT.1643.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3785:8_B9-INPUT.1643.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_1831.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785:1831.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3785 3785_repset.15663114.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785:repset.15663114.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_1829.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786:1829.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3786:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3786:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_1828.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786:1828.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_repset.15663111.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786:repset.15663111.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_2018_Kc4_LSD1-Q3430.1828.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3786:8_Kc4_LSD1-Q3430.1828.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_2019_Kc5_LSD1-Q3430.1829.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3786:9_Kc5_LSD1-Q3430.1829.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3786 3786_repset.15663111.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_repset.16023715.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787:repset.16023715.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_repset.16023715.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_2079_Kc12_MBD-R2(Q4167).1897.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3787:9_Kc12_MBD-R2(Q4167).1897.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_2078_Kc11_MBD-R2(Q4167).1896.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3787:8_Kc11_MBD-R2(Q4167).1896.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_1897.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787:1897.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_2086_Kc11_Input.1904.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3787:6_Kc11_Input.1904.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_1896.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787:1896.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3787 3787_2087_Kc12_Input.1905.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3787:7_Kc12_Input.1905.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_841.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788:841.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_840.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788:840.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_pirrota_1083_A20_MLE(Q4143).841.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3788:3_A20_MLE(Q4143).841.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3788:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_repset.9699473.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3788:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_pirrota_1082_A21_MLE(Q4143).840.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3788:2_A21_MLE(Q4143).840.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3788 3788_repset.9699473.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788:repset.9699473.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_1876.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789:1876.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_1875.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789:1875.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3789:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_2038_Kc11_Mod(mdg4).1875.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3789:8_Kc11_Mod(mdg4).1875.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_2039.Kc12_Mod(mdg4).1876.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3789:9.Kc12_Mod(mdg4).1876.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3789:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_repset.15664100.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789:repset.15664100.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3789 3789_repset.15664100.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_repset.15663116.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3790:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3790:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_1586.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790:1586.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_1860_Kc5_NURF301(Q2602).1586.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3790:60_Kc5_NURF301(Q2602).1586.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_repset.15663116.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790:repset.15663116.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_1585.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790:1585.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3790 3790_1859_Kc4_NURF301(Q2602).1585.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3790:59_Kc4_NURF301(Q2602).1585.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_repset.15303265.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791:repset.15303265.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_repset.15303265.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_1950_Kc5_Pc.1670.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3791:0_Kc5_Pc.1670.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_1670.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791:1670.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_1951_Kc5_Input.1671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3791:1951_Kc5_Input.1671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3791:pirrota_1956_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_1753.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791:1753.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3791 3791_1959_Kc11_Pc.1753.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3791:9_Kc11_Pc.1753.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_pirrota_1952_KC5_PCL-Q3412.1672.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3792:pirrota_1952_KC5_PCL-Q3412.1672.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_1672.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792:1672.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_repset.15664094.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3792:pirrota_1956_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_1951_Kc5_Input.1671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3792:1951_Kc5_Input.1671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_repset.15664094.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792:repset.15664094.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_2034_Kc11_PCL.1871.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3792:2034_Kc11_PCL.1871.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3792 3792_1871.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792:1871.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_repset.14910806.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_repset.14910806.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783:repset.14910806.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_1644.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783:1644.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_pirrota_1917_B4-INPUT.1642.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3783:7_B4-INPUT.1642.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_pirrota_1918_B9-INPUT.1643.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3783:8_B9-INPUT.1643.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_pirrota_1919_B4-JMJD2A-KDM4A-Q2541.1644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3783:19_B4-JMJD2A-KDM4A-Q2541.1644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_1645.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3783:1645.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3783 3783_pirrota_1920_B9-JMJD2A-KDM4A-Q2541.1645.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3783:20_B9-JMJD2A-KDM4A-Q2541.1645.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_pirrota_803_A14.input.566.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3784:803_A14.input.566.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_repset.8061131.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_repset.8061131.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784:repset.8061131.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_624.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784:624.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_457.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3784:457.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_pirrota_765_S12_JMJD2A-41.457.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3784:765_S12_JMJD2A-41.457.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_pirrota_853_A14.JHJD2A-41.624.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3784:853_A14.JHJD2A-41.624.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3784 3784_pirrota_641_S12_input_gk2.417.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL JMJD2A-KDM4A:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3784:641_S12_input_gk2.417.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip JMJD2A/KDM4A Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_pirrota_2020_B4_LSD1-Q3430.1830.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3785:pirrota_2020_B4_LSD1-Q3430.1830.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_repset.15663114.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_2021_B9_LSD1-Q3430.1831.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3785:2021_B9_LSD1-Q3430.1831.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_pirrota_1917_B4-INPUT.1642.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3785:7_B4-INPUT.1642.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_1830.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785:1830.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_pirrota_1918_B9-INPUT.1643.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3785:8_B9-INPUT.1643.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_1831.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785:1831.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3785 3785_repset.15663114.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3785:repset.15663114.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_1829.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786:1829.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3786:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3786:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_1828.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786:1828.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_repset.15663111.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786:repset.15663111.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_2018_Kc4_LSD1-Q3430.1828.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3786:8_Kc4_LSD1-Q3430.1828.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_2019_Kc5_LSD1-Q3430.1829.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3786:9_Kc5_LSD1-Q3430.1829.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3786 3786_repset.15663111.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3786.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_repset.16023715.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787:repset.16023715.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_repset.16023715.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_2079_Kc12_MBD-R2(Q4167).1897.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3787:9_Kc12_MBD-R2(Q4167).1897.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_2078_Kc11_MBD-R2(Q4167).1896.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3787:8_Kc11_MBD-R2(Q4167).1896.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_1897.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787:1897.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_2086_Kc11_Input.1904.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3787:6_Kc11_Input.1904.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_1896.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3787:1896.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3787 3787_2087_Kc12_Input.1905.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MBD-R2:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3787:7_Kc12_Input.1905.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MBD-R2 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_841.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788:841.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_840.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788:840.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_pirrota_1083_A20_MLE(Q4143).841.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3788:3_A20_MLE(Q4143).841.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3788:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_repset.9699473.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3788:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_pirrota_1082_A21_MLE(Q4143).840.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3788:2_A21_MLE(Q4143).840.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3788 3788_repset.9699473.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MLE:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3788:repset.9699473.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MLE Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_1876.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789:1876.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_1875.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789:1875.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3789:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_2038_Kc11_Mod(mdg4).1875.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3789:8_Kc11_Mod(mdg4).1875.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_2039.Kc12_Mod(mdg4).1876.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3789:9.Kc12_Mod(mdg4).1876.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3789:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_repset.15664100.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789:repset.15664100.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3789 3789_repset.15664100.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 mod(mdg4):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3789.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip mod(mdg4) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_repset.15663116.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_pirrota_1361_Kc-4_Input.1113.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3790:1_Kc-4_Input.1113.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_pirrota_1362_Kc-5_Input.1114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3790:2_Kc-5_Input.1114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_1586.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790:1586.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_1860_Kc5_NURF301(Q2602).1586.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3790:60_Kc5_NURF301(Q2602).1586.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_repset.15663116.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790:repset.15663116.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_1585.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3790:1585.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3790 3790_1859_Kc4_NURF301(Q2602).1585.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL NURF301:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3790:59_Kc4_NURF301(Q2602).1585.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip NURF301 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_repset.15303265.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791:repset.15303265.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_repset.15303265.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_1950_Kc5_Pc.1670.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3791:0_Kc5_Pc.1670.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_1670.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791:1670.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_1951_Kc5_Input.1671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3791:1951_Kc5_Input.1671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3791:pirrota_1956_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_1753.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3791:1753.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3791 3791_1959_Kc11_Pc.1753.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3791:9_Kc11_Pc.1753.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_pirrota_1952_KC5_PCL-Q3412.1672.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3792:pirrota_1952_KC5_PCL-Q3412.1672.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_1672.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792:1672.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_repset.15664094.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3792:pirrota_1956_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_1951_Kc5_Input.1671.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3792:1951_Kc5_Input.1671.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_repset.15664094.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792:repset.15664094.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_2034_Kc11_PCL.1871.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3792:2034_Kc11_PCL.1871.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3792 3792_1871.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PCL:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3792:1871.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PCL Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3793 3793_2000.L3 Egg_10.1-1a_2_POF.1797.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Larvae-3rd-instar#Strain=EGG-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3793:2000.L3-Egg_10.1-1a_2_POF.1797.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=EGG mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3793 3793_repset.14517389.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Developmental-Stage=Larvae-3rd-instar#Strain=EGG-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3793.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=EGG mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3793 3793_repset.14517389.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=EGG-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3793:repset.14517389.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=EGG mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -9185,44 +9364,44 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3796 3796_2062 _Head 10 OR POF.1863.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3796:2-_Head-10-OR-POF.1863.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3796 3796_1993_Head10_OR_input.1790.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3796:3_Head10_OR_input.1790.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3796 3796_repset.15664086.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3796:repset.15664086.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_1966_Kc4 PSC-4.1761.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3797:1966_Kc4-PSC-4.1761.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_repset.15303260.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_repset.15303260.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797:repset.15303260.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_1761.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797:1761.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_pirrota_1978_Kc11 Psc.1775.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3797:pirrota_1978_Kc11-Psc.1775.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3797:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3797:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3797 3797_1775.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797:1775.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_pirrota_1989_L3 HP1a-3 input.1786.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3798:989_L3-HP1a-3-input.1786.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_repset.13435394.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:repset.13435394.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_repset.13435394.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_1798.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:1798.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_pirrota_1722_L3_HP1a-2_Input(20cyc).1427.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3798:722_L3_HP1a-2_Input(20cyc).1427.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_1730.L3-HP1a-2-RNAPolII.1435.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3798:1730.L3-HP1a-2-RNAPolII.1435.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_pirrota_1721_L3_HP1a-1_Input(20cyc).1426.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3798:721_L3_HP1a-1_Input(20cyc).1426.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_2001.L3_HP1a_3_RNA Pol II.1798.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3798:2001.L3_HP1a_3_RNA-Pol-II.1798.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_1729.L3-H31a-1-RNAPolII.1434.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3798:1729.L3-H31a-1-RNAPolII.1434.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_1435.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:1435.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3798 3798_1434.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:1434.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_repset.14517069.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1524.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:1524.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_repset.14517069.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:repset.14517069.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1817.L3_14_RNAPolII.1524.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3799:1817.L3_14_RNAPolII.1524.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_pirrota_1988_L3-17 input.1785.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3799:pirrota_1988_L3-17-input.1785.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1996_L3-17_RNA Pol II.1793.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3799:1996_L3-17_RNA-Pol-II.1793.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_pirrota_1816_L3_13_RNAPol II.1523.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3799:pirrota_1816_L3_13_RNAPol-II.1523.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1827.L3_14_Input.1532.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3799:1827.L3_14_Input.1532.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1826.L3_13_Input.1531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3799:1826.L3_13_Input.1531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1523.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:1523.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3799 3799_1793.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:1793.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3800:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_1927_Kc5_5mc3-Q2580.1700.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3800:7_Kc5_5mc3-Q2580.1700.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_1926_Kc4_5mc3_Q2580.1699.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3800:6_Kc4_5mc3_Q2580.1699.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_repset.14910815.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3800:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_1700.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800:1700.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_repset.14910815.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800:repset.14910815.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3800 3800_1699.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800:1699.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_1966_Kc4 PSC-4.1761.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3797:1966_Kc4-PSC-4.1761.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_repset.15303260.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_repset.15303260.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797:repset.15303260.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_1761.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797:1761.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_pirrota_1978_Kc11 Psc.1775.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3797:pirrota_1978_Kc11-Psc.1775.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3797:61_Kc4_Input.1756.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3797:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3797 3797_1775.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Psc:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3797:1775.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Psc Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_pirrota_1989_L3 HP1a-3 input.1786.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3798:989_L3-HP1a-3-input.1786.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_repset.13435394.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:repset.13435394.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_repset.13435394.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_1798.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:1798.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_pirrota_1722_L3_HP1a-2_Input(20cyc).1427.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3798:722_L3_HP1a-2_Input(20cyc).1427.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_1730.L3-HP1a-2-RNAPolII.1435.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3798:1730.L3-HP1a-2-RNAPolII.1435.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_pirrota_1721_L3_HP1a-1_Input(20cyc).1426.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3798:721_L3_HP1a-1_Input(20cyc).1426.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_2001.L3_HP1a_3_RNA Pol II.1798.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3798:2001.L3_HP1a_3_RNA-Pol-II.1798.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_1729.L3-H31a-1-RNAPolII.1434.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3798:1729.L3-H31a-1-RNAPolII.1434.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_1435.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:1435.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3798 3798_1434.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3798:1434.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_repset.14517069.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1524.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:1524.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_repset.14517069.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:repset.14517069.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1817.L3_14_RNAPolII.1524.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3799:1817.L3_14_RNAPolII.1524.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_pirrota_1988_L3-17 input.1785.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3799:pirrota_1988_L3-17-input.1785.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1996_L3-17_RNA Pol II.1793.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3799:1996_L3-17_RNA-Pol-II.1793.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_pirrota_1816_L3_13_RNAPol II.1523.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3799:pirrota_1816_L3_13_RNAPol-II.1523.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1827.L3_14_Input.1532.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3799:1827.L3_14_Input.1532.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1826.L3_13_Input.1531.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3799:1826.L3_13_Input.1531.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1523.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:1523.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3799 3799_1793.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3799:1793.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_pirrota_1467_Kc4_18cycles_Input.1185.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3800:67_Kc4_18cycles_Input.1185.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_1927_Kc5_5mc3-Q2580.1700.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3800:7_Kc5_5mc3-Q2580.1700.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_1926_Kc4_5mc3_Q2580.1699.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3800:6_Kc4_5mc3_Q2580.1699.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_repset.14910815.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_pirrota_1400_Kc5_Input18.1152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3800:00_Kc5_Input18.1152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_1700.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800:1700.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_repset.14910815.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800:repset.14910815.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3800 3800_1699.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Smc3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3800:1699.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Smc3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3802 3802_repset.15664095.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3802.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3802 3802_2065_Head 9 OR Su(var)3-9.1866.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3802:5_Head-9-OR-Su(var)3-9.1866.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3802 3802_1867.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3802:1867.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -9231,30 +9410,60 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3802 3802_2066.Head 10_OR.Su(var)3-9.1867.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3802:6.Head-10_OR.Su(var)3-9.1867.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3802 3802_1993_Head10_OR_input.1790.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3802:3_Head10_OR_input.1790.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3802 3802_repset.15664095.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Developmental-Stage=Mixed-Adult#Strain=Oregon-R#Tissue=Heads-OR#organism-part=Tissue-Heads-OR-GK-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3802:repset.15664095.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Mixed Adult Developmental-Stage=Mixed Adult#Strain=Oregon-R#Tissue=Heads OR#organism part=Tissue:Heads-OR:GK:1 Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_1782.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803:1782.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_repset.15664085.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803:repset.15664085.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_pirrota_1984_Kc12_ZW5-HB.1782.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3803:pirrota_1984_Kc12_ZW5-HB.1782.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_2025.Kc11_ZW5-HB.1879.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3803:2025.Kc11_ZW5-HB.1879.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3803:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_repset.15664085.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3803:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3803 3803_1879.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803:1879.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_149.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804:149.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_pirrota_303_S14_Input.148.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3804:303_S14_Input.148.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_pirrota_280_S13_ZW5.125.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3804:280_S13_ZW5.125.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_repset.4161605.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804:repset.4161605.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_pirrota_304_S14_Zw5.149.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3804:304_S14_Zw5.149.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_repset.4161605.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_125.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804:125.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3804 3804_pirrota_264_S13_Input.116.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3804:264_S13_Input.116.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3831 3831_SRR316200.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831:SRR316200.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_SRR325178.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831:SRR325178.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_LID9057_FC61WW7AAXX_5_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831:LID9057_FC61WW7AAXX_5_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_LID9057.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_LID9057_FC61WW7AAXX_5_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831:LID9057_FC61WW7AAXX_5_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_LID21491.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_LID21491_FC62Y3KAAXX_1_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831:LID21491_FC62Y3KAAXX_1_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3831 3831_LID21491_FC62Y3KAAXX_1_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831:LID21491_FC62Y3KAAXX_1_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3803 3803_1782.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803:1782.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_repset.15664085.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803:repset.15664085.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_pirrota_1984_Kc12_ZW5-HB.1782.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3803:pirrota_1984_Kc12_ZW5-HB.1782.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_2025.Kc11_ZW5-HB.1879.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3803:2025.Kc11_ZW5-HB.1879.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3803:79_Kc12_INPUT.1776.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_repset.15664085.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_pirrota_1956_Kc11_Input.1750.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3803:56_Kc11_Input.1750.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3803 3803_1879.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3803:1879.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_149.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804:149.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_pirrota_303_S14_Input.148.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3804:303_S14_Input.148.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_pirrota_280_S13_ZW5.125.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3804:280_S13_ZW5.125.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_repset.4161605.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804:repset.4161605.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_pirrota_304_S14_Zw5.149.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3804:304_S14_Zw5.149.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_repset.4161605.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_125.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3804:125.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3804 3804_pirrota_264_S13_Input.116.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL ZW5:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3804:264_S13_Input.116.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip ZW5 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3806 3806_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq broad:Developmental-Stage=White-prepupae-(WPP):ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3806.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq broad White prepupae (WPP) Developmental-Stage=White prepupae (WPP) Rep-1 Dmel_r5.32 White, K. TF binding sites +3806 3806_BRCore_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle broad:Developmental-Stage=White-prepupae-(WPP):ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3806.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq broad White prepupae (WPP) Developmental-Stage=White prepupae (WPP) Rep-1 Dmel_r5.32 White, K. TF binding sites +3806 3806_BRCore_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 broad:Developmental-Stage=White-prepupae-(WPP):ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3806.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq broad White prepupae (WPP) Developmental-Stage=White prepupae (WPP) Rep-1 Dmel_r5.32 White, K. TF binding sites +3807 3807_D.pse_E0-4h_K27me3_peaks.bed.gff.gz D.melanogaster/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3K27me3:Developmental-Stage=Embryos-0-4-hr#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3807.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-seq H3K27me3 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3807 3807_SRR384915.fastq.gz D.melanogaster/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K27me3:Developmental-Stage=Embryos-0-4-hr#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3807.fastq.gz raw-seqfile_fastq D. melanogaster Histone Modification ChIP-seq H3K27me3 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3807 3807_D.pse_E0-4h_K27me3_density.wig.gz D.melanogaster/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K27me3:Developmental-Stage=Embryos-0-4-hr#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3807.wig.gz coverage-graph_wiggle D. melanogaster Histone Modification ChIP-seq H3K27me3 Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3809 3809_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq GAF:Developmental-Stage=Embryos-0-4-hr#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3809.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq GAF Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. TF binding sites +3809 3809_D.pse_E0-4h_Trl-D2_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 GAF:Developmental-Stage=Embryos-0-4-hr#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3809.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq GAF Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. TF binding sites +3809 3809_D.pse_E0-4h_Trl-D2_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle GAF:Developmental-Stage=Embryos-0-4-hr#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3809.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq GAF Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. TF binding sites +3810 3810_D.pse_WPP_K27me3_density.wig.gz D.melanogaster/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K27me3:Developmental-Stage=Larvae-L3-stage#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3810.wig.gz coverage-graph_wiggle D. melanogaster Histone Modification ChIP-seq H3K27me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3810 3810_SRR384915.fastq.gz D.melanogaster/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K27me3:Developmental-Stage=Larvae-L3-stage#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3810.fastq.gz raw-seqfile_fastq D. melanogaster Histone Modification ChIP-seq H3K27me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3810 3810_D.pse_WPP_K27me3_peaks.bed.gff.gz D.melanogaster/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3K27me3:Developmental-Stage=Larvae-L3-stage#Strain=D.pseudoobscura-wild-type:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3810.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-seq H3K27me3 Larvae L3 stage Developmental-Stage=Larvae L3 stage#Strain=D.pseudoobscura wild-type Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3823 3823_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq Yki:Developmental-Stage=Embryos-0-4-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3823.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq Yki Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3823 3823_E0-4_Yki-91_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle Yki:Developmental-Stage=Embryos-0-4-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3823.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq Yki Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3823 3823_E0-4_Yki-91_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 Yki:Developmental-Stage=Embryos-0-4-hr:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3823.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq Yki Embryos 0-4 hr Developmental-Stage=Embryos 0-4 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3824 3824_E16-24h_13T(exd)-GFP_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 exd:Developmental-Stage=Embryos-16-24-hr#Strain=13T-exd-GFP:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3824.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq exd Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr#Strain=13T exd-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +3824 3824_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq exd:Developmental-Stage=Embryos-16-24-hr#Strain=13T-exd-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3824.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq exd Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr#Strain=13T exd-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +3824 3824_E16-24h_13T(exd)-GFP_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle exd:Developmental-Stage=Embryos-16-24-hr#Strain=13T-exd-GFP:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3824.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq exd Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr#Strain=13T exd-GFP Rep-1 Dmel_r5.32 White, K. TF binding sites +3825 3825_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq cabut:Developmental-Stage=Embryos-16-24-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3825.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq cabut Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3825 3825_E16-24h_Cabut_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 cabut:Developmental-Stage=Embryos-16-24-hr:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3825.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq cabut Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3825 3825_E16-24h_Cabut_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle cabut:Developmental-Stage=Embryos-16-24-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3825.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq cabut Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3826 3826_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq Fer3:Developmental-Stage=Embryos-16-24-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3826.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq Fer3 Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3826 3826_E16-24h_Fer3_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle Fer3:Developmental-Stage=Embryos-16-24-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3826.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq Fer3 Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3826 3826_E16-24h_Fer3_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 Fer3:Developmental-Stage=Embryos-16-24-hr:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3826.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq Fer3 Embryos 16-24 hr Developmental-Stage=Embryos 16-24 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3827 3827_E8-16h_h_density.wig.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/coverage-graph_wiggle hairy:Developmental-Stage=Embryos-8-16-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3827.wig.gz coverage-graph_wiggle D. melanogaster Transcriptional Factor ChIP-seq hairy Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3827 3827_E8-16h_h_peaks.bed.gff.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/computed-peaks_gff3 hairy:Developmental-Stage=Embryos-8-16-hr:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3827.gff3.gz computed-peaks_gff3 D. melanogaster Transcriptional Factor ChIP-seq hairy Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3827 3827_SRR384915.fastq.gz D.melanogaster/Transcriptional-Factor/ChIP-seq/raw-seqfile_fastq hairy:Developmental-Stage=Embryos-8-16-hr:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3827.fastq.gz raw-seqfile_fastq D. melanogaster Transcriptional Factor ChIP-seq hairy Embryos 8-16 hr Developmental-Stage=Embryos 8-16 hr Rep-1 Dmel_r5.32 White, K. TF binding sites +3829 3829_WPP_K27me3_peaks.bed.gff.gz D.melanogaster/Histone-Modification/ChIP-seq/computed-peaks_gff3 H3K27me3:Developmental-Stage=White-prepupae-(WPP):ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_3829.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-seq H3K27me3 White prepupae (WPP) Developmental-Stage=White prepupae (WPP) Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3829 3829_WPP_K27me3_density.wig.gz D.melanogaster/Histone-Modification/ChIP-seq/coverage-graph_wiggle H3K27me3:Developmental-Stage=White-prepupae-(WPP):ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3829.wig.gz coverage-graph_wiggle D. melanogaster Histone Modification ChIP-seq H3K27me3 White prepupae (WPP) Developmental-Stage=White prepupae (WPP) Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3829 3829_SRR384915.fastq.gz D.melanogaster/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K27me3:Developmental-Stage=White-prepupae-(WPP):ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_3829.fastq.gz raw-seqfile_fastq D. melanogaster Histone Modification ChIP-seq H3K27me3 White prepupae (WPP) Developmental-Stage=White prepupae (WPP) Rep-1 Dmel_r5.32 White, K. Histone modification and replacement +3831 3831_SRR316200.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831:SRR316200.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_SRR325178.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831:SRR325178.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_LID9057_FC61WW7AAXX_5_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831:LID9057_FC61WW7AAXX_5_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_LID9057.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_LID9057_FC61WW7AAXX_5_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3831:LID9057_FC61WW7AAXX_5_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_LID21491.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_LID21491_FC62Y3KAAXX_1_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831:LID21491_FC62Y3KAAXX_1_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3831 3831_LID21491_FC62Y3KAAXX_1_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3831:LID21491_FC62Y3KAAXX_1_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3873 3873_N2_EE_50-0.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3873:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3873 3873_N2_EE_50-0.alignments.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3873.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3873 3873_SRR332922.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3873:2.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9416,22 +9625,22 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3892 3892_repset.14090670.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)-3-9-06-17-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3892.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var) 3-9 06 17 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3892 3892_pirrotta_1684_L3_Su(var)3-9_06_17_2_Input(20cyc).1389.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)-3-9-06-17-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3892:4_L3_Su(var)3-9_06_17_2_Input(20cyc).1389.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var) 3-9 06 17 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3892 3892_pirrota__1707_L3_su(var)3-9_06_17_1_HP1a.1412.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)-3-9-06-17-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3892:7_L3_su(var)3-9_06_17_1_HP1a.1412.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var) 3-9 06 17 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_pirrota__1686_S2-H1_Input(20 cyc).1391.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3893:pirrota__1686_S2-H1_Input(20-cyc).1391.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_1609.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893:1609.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_repset.14517399.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893:repset.14517399.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_pirrota_1806_S2-H2_HP1a.1513.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3893:pirrota_1806_S2-H2_HP1a.1513.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_1808.S2-H2_Input(20cyc).1515.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3893:1808.S2-H2_Input(20cyc).1515.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_1513.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893:1513.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_repset.14517399.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3893 3893_1898_S2-H1_HP1a.1609.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3893:1898_S2-H1_HP1a.1609.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_repset.3211338.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_pirrota_920_S15_PHO.675.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3894:920_S15_PHO.675.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_675.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894:675.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_pirrota_307_S14_Pho.152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3894:307_S14_Pho.152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3894:873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_repset.3211338.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894:repset.3211338.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_152.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894:152.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3894 3894_pirrota_303_S14_Input.148.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3894:303_S14_Input.148.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_pirrota__1686_S2-H1_Input(20 cyc).1391.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3893:pirrota__1686_S2-H1_Input(20-cyc).1391.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_1609.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893:1609.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_repset.14517399.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893:repset.14517399.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_pirrota_1806_S2-H2_HP1a.1513.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3893:pirrota_1806_S2-H2_HP1a.1513.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_1808.S2-H2_Input(20cyc).1515.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3893:1808.S2-H2_Input(20cyc).1515.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_1513.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893:1513.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_repset.14517399.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3893.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3893 3893_1898_S2-H1_HP1a.1609.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3893:1898_S2-H1_HP1a.1609.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#RNAi-reagent=CG8409-RNAi#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_repset.3211338.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_pirrota_920_S15_PHO.675.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3894:920_S15_PHO.675.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_675.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894:675.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_pirrota_307_S14_Pho.152.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3894:307_S14_Pho.152.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3894:873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_repset.3211338.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894:repset.3211338.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_152.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3894:152.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3894 3894_pirrota_303_S14_Input.148.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Pho:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3894:303_S14_Input.148.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Pho Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3895 3895_pirrota_1152_Elate7_Input(20cyc).974.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3895:2_Elate7_Input(20cyc).974.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3895 3895_pirrota_1771_Elate8_POF.1476.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3895:pirrota_1771_Elate8_POF.1476.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3895 3895_1770_Elate7_POF.1475.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Developmental-Stage=Embryos-14-16-hr-OR#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3895:1770_Elate7_POF.1475.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr OR#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -9448,17 +9657,17 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3896 3896_repset.13435396.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3896:repset.13435396.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3896 3896_1438.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3896:1438.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3896 3896_1439.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3896:1439.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_repset.8978454.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:repset.8978454.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_2095_A22_Input.1919.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3897:2095_A22_Input.1919.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_pirrota_874_A14_POF.645.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3897:pirrota_874_A14_POF.645.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_repset.8978454.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_pirrota_584_A14_Input(20cycles).373.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3897:pirrota_584_A14_Input(20cycles).373.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_1930.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:1930.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_pirrota_875_A15_POF.646.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3897:pirrota_875_A15_POF.646.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_pirrota_684_A15_Input.453.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3897:pirrota_684_A15_Input.453.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_645.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:645.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_2106_A22_POF.1930.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3897:2106_A22_POF.1930.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3897 3897_646.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:646.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_repset.8978454.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:repset.8978454.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_2095_A22_Input.1919.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3897:2095_A22_Input.1919.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_pirrota_874_A14_POF.645.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3897:pirrota_874_A14_POF.645.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_repset.8978454.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_pirrota_584_A14_Input(20cycles).373.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3897:pirrota_584_A14_Input(20cycles).373.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_1930.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:1930.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_pirrota_875_A15_POF.646.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3897:pirrota_875_A15_POF.646.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_pirrota_684_A15_Input.453.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3897:pirrota_684_A15_Input.453.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_645.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:645.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_2106_A22_POF.1930.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3897:2106_A22_POF.1930.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3897 3897_646.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle POF:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3897:646.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip POF Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3898 3898_repset.9702782.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3898:repset.9702782.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3898 3898_1165.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3898:1165.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3898 3898_1527.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3898:1527.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -9472,14 +9681,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3898 3898_pirrota_1444_L3_4_Su(var)3-9.1166.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3898:pirrota_1444_L3_4_Su(var)3-9.1166.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3898 3898_1776.L3-4-S4(var)3-9.1481.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3898:1776.L3-4-S4(var)3-9.1481.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3898 3898_pirrota_1443_L3_2_Su(var)3-9.1165.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Developmental-Stage=Larvae-3rd-instar#Strain=Oregon-R:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3898:pirrota_1443_L3_2_Su(var)3-9.1165.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Oregon-R Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_1160.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899:1160.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_1159.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899:1159.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_pirrota_1438_Kc5_Su(var)3-9.1160.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3899:8_Kc5_Su(var)3-9.1160.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3899:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3899:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_pirrota_1437_Kc4_Su(var)3-9.1159.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3899:7_Kc4_Su(var)3-9.1159.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_repset.9702781.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3899 3899_repset.9702781.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899:repset.9702781.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_1160.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899:1160.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_1159.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899:1159.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_pirrota_1438_Kc5_Su(var)3-9.1160.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3899:8_Kc5_Su(var)3-9.1160.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_pirrota_1041_Kc5_Input(20cyc).815.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3899:1_Kc5_Input(20cyc).815.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_pirrota_1040_Kc4_Input(20cyc).814.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3899:0_Kc4_Input(20cyc).814.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_pirrota_1437_Kc4_Su(var)3-9.1159.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3899:7_Kc4_Su(var)3-9.1159.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_repset.9702781.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3899 3899_repset.9702781.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Su(var)3-9:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3899:repset.9702781.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Su(var)3-9 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3900 3900_SRR316928.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3900:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3900 3900_PharyngealMuscle.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3900:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3900 3900_PharyngealMuscle.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3900:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9579,91 +9788,91 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3912 3912_SmacDb10EcoliCntl.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Adult-S-macescens-Db10-control-EcoliOP50-exposed-1-24-hrs#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3912:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Adult S macescens Db10 control EcoliOP50 exposed 1 24 hr Developmental-Stage=Adult S macescens Db10 control EcoliOP50 exposed 1 24 hrs#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3912 3912_SRR031120.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-S-macescens-Db10-control-EcoliOP50-exposed-1-24-hrs#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3912:0.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Adult S macescens Db10 control EcoliOP50 exposed 1 24 hr Developmental-Stage=Adult S macescens Db10 control EcoliOP50 exposed 1 24 hrs#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3912 3912_SmacDb10EcoliCntl.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Adult-S-macescens-Db10-control-EcoliOP50-exposed-1-24-hrs#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3912:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Adult S macescens Db10 control EcoliOP50 exposed 1 24 hr Developmental-Stage=Adult S macescens Db10 control EcoliOP50 exposed 1 24 hrs#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3924 3924_seq-NA_N2_LTemb_Lemb3A.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:3A.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3924:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-NA_N2_LTemb_Lemb3A.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:3A.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3924:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3924 3924_seq-BH00005_LIN9_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-9:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3924:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-NA_N2_LTemb_Lemb3A.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:3A.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-NA_N2_LTemb_Lemb3A.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:3A.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3925:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3925:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3925:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-JA00011_LIN35_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3925 3925_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:3B.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3928:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:3B.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3928:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3928 3928_seq-BH00003_LIN37_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-37:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3928:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:3.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:3.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-NA_N2_LTemb_Lemb4B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:4.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3930:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3930:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-BH00001_LIN52_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3930:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3930 3930_seq-NA_N2_LTemb_Lemb4B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryos#Strain=Ab-BH00001-LIN52-JL-1#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:4.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryos#Strain=Ab:BH00001 LIN52:JL:1#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-NA_N2_LTemb_Lemb3A.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:3A.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3932:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-NA_N2_LTemb_Lemb3A.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:3A.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3932:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3932:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3932 3932_seq-BH00004_LIN54_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3934:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-NA_N2_LTemb_Lemb4B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:4.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3934:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3934:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:3.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-SDQ3590_EFL1_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:3.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3934 3934_seq-NA_N2_LTemb_Lemb4B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:4.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3935:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:3B.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3935:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:3B.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3935 3935_seq-SDQ3599_DPL1_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Late-Embryos#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3935:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryos#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement -3940 3940_LID21492.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_SRR316202.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940:SRR316202.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_LID9058_FC61WW7AAXX_6_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940:LID9058_FC61WW7AAXX_6_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_LID9058.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_LID21492_FC62Y3KAAXX_2_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940:LID21492_FC62Y3KAAXX_2_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_LID9058_FC61WW7AAXX_6_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940:LID9058_FC61WW7AAXX_6_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_LID21492_FC62Y3KAAXX_2_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940:LID21492_FC62Y3KAAXX_2_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3940 3940_SRR325179.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940:SRR325179.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3924 3924_seq-NA_N2_LTemb_Lemb3A.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:3A.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3924:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-NA_N2_LTemb_Lemb3A.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:3A.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3924:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3924:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3924:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3924 3924_seq-BH00005_LIN9_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-9:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3924:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-9 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-NA_N2_LTemb_Lemb3A.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:3A.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-NA_N2_LTemb_Lemb3A.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:3A.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3925:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3925:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3925:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-JA00011_LIN35_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3925:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3925 3925_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-35:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3925:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-35 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:3B.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3928:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:3B.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3928:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3928:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3928:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3928 3928_seq-BH00003_LIN37_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-37:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3928:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-37 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:3.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:3.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-NA_N2_LTemb_Lemb4B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:4.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3930:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3930:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3930:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-BH00001_LIN52_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3930:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3930 3930_seq-NA_N2_LTemb_Lemb4B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-52:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3930:4.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-52 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-NA_N2_LTemb_Lemb3A.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:3A.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3932:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-NA_N2_LTemb_Lemb3A.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:3A.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3932:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3932:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3932:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3932 3932_seq-BH00004_LIN54_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle LIN-54:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3932:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq LIN-54 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3934:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-NA_N2_LTemb_Lemb4B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:4.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3934:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3934:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:3.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-SDQ3590_EFL1_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3934:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:3.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3934 3934_seq-NA_N2_LTemb_Lemb4B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle EFL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3934:4.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq EFL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_1_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3935:1.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-NA_N2_LTemb_Lemb3B.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:3B.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_2_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3935:2.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_1_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:1.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_2_treat_afterfiting_all.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-NA_N2_LTemb_Lemb2.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:2.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-NA_N2_LTemb_Lemb2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_2.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:2.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_1.fq.gz C.elegans/Histone-Modification/ChIP-seq/raw-seqfile_fastq DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:ChIP:Cele_WS220:modENCODE_3935:1.fastq.gz raw-seqfile_fastq C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-NA_N2_LTemb_Lemb3B.wig.gz C.elegans/Histone-Modification/ChIP-seq/coverage-graph_wiggle DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1:input:Cele_WS220:modENCODE_3935:3B.wig.gz coverage-graph_wiggle C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3935 3935_seq-SDQ3599_DPL1_N2_LTemb_all_peaks.gff.gz C.elegans/Histone-Modification/ChIP-seq/computed-peaks_gff3 DPL-1:Developmental-Stage=Late-Embryonic-stage#temperature=20-degree-celsius:ChIP-seq:Rep-1::Cele_WS220:modENCODE_3935:all.gff3.gz computed-peaks_gff3 C. elegans Histone Modification ChIP-seq DPL-1 Late Embryos Developmental-Stage=Late Embryonic stage#temperature=20 degree celsius Rep-1 Cele_WS220 Lieb, J. Histone modification and replacement +3940 3940_LID21492.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_SRR316202.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940:SRR316202.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_LID9058_FC61WW7AAXX_6_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940:LID9058_FC61WW7AAXX_6_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_LID9058.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_LID21492_FC62Y3KAAXX_2_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940:LID21492_FC62Y3KAAXX_2_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_LID9058_FC61WW7AAXX_6_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940:LID9058_FC61WW7AAXX_6_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_LID21492_FC62Y3KAAXX_2_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3940:LID21492_FC62Y3KAAXX_2_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3940 3940_SRR325179.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3940:SRR325179.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 3941 3941_repset.16025470.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3941.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3941 3941_2026.B10_INPUT.1880.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3941:026.B10_INPUT.1880.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3941 3941_2044.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3941:2044.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -9672,59 +9881,59 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3941 3941_2178_B10_H3K27me1.2044.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3941:8_B10_H3K27me1.2044.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3941 3941_2045.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3941:2045.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 3941 3941_2175_B11_Input.2041.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3941:175_B11_Input.2041.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_2046.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942:2046.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_2180_Kc4_H3K27me1.2046.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3942:0_Kc4_H3K27me1.2046.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_repset.16025472.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3942:61_Kc4_Input.175.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3942:79_Kc12_INPUT.177.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_repset.16025472.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942:repset.16025472.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_2181_Kc12_H3K27me1.2047.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3942:1_Kc12_H3K27me1.2047.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3942 3942_2047.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942:2047.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_pirrota_1052_S15_H3K27me1.778.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3943:pirrota_1052_S15_H3K27me1.778.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3943:pirrota_873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_2176_A22_H3K27me1.2042.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3943:2176_A22_H3K27me1.2042.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_2174_A23_Input.2040.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3943:2174_A23_Input.2040.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_2029_A22_INPUT.1883.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3943:2029_A22_INPUT.1883.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_778.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:778.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_2042.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:2042.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_repset.16025463.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_repset.16025463.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:repset.16025463.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_2177_A23_H3K27me1.2043.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3943:2177_A23_H3K27me1.2043.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3943 3943_2043.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:2043.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -3945 3945_repset.13435031.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945:repset.13435031.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_1424.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945:1424.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_A21_dm TopoII(DAJ).1425.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3945:A21_dm-TopoII(DAJ).1425.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3945:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_pirrota_1719_A20_dmTopo II(DAJ).1424.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3945:pirrota_1719_A20_dmTopo-II(DAJ).1424.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_repset.13435031.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3945:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3945 3945_1425.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945:1425.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_1411.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:1411.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_repset.13435401.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:repset.13435401.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_1410.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:1410.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_1528.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:1528.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_pirrotta_1681_S18_Input(20cyc).1386.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3948:1_S18_Input(20cyc).1386.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_pirrotta_1682_S19_Input(20cyc).1387.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3948:2_S19_Input(20cyc).1387.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_pirrota__1705_S19_HP4.1410.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3948:1705_S19_HP4.1410.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_repset.13435401.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_pirrota_1821_S19_HP4.1528.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3948:1821_S19_HP4.1528.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3948 3948_pirrota__1706_S19_HP4.1411.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3948:1706_S19_HP4.1411.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_1946.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949:1946.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_repset.13893767.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_pirrota_1748_S18_Input.1453.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3949:pirrota_1748_S18_Input.1453.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_2119_A23_Input.1837.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3949:2119_A23_Input.1837.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_repset.13893767.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949:repset.13893767.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_2125_A23_LSD1-Q3430.1946.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3949:2125_A23_LSD1-Q3430.1946.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_1452.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949:1452.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3949 3949_pirrota_1747_S18_LSD1-Q3430.1452.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3949:pirrota_1747_S18_LSD1-Q3430.1452.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_repset.9699726.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950:repset.9699726.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3950:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3950:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_837.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950:837.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_pirrota_1078_A21_MRG15(Q2482).836.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3950:8_A21_MRG15(Q2482).836.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_836.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950:836.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_pirrota_1079_A20_MRG15(Q2482).837.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3950:9_A20_MRG15(Q2482).837.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -3950 3950_repset.9699726.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3942 3942_2046.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942:2046.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_2180_Kc4_H3K27me1.2046.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3942:0_Kc4_H3K27me1.2046.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_repset.16025472.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_pirrota_1961_Kc4_Input.1756.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3942:61_Kc4_Input.175.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_pirrota_1979_Kc12_INPUT.1776.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3942:79_Kc12_INPUT.177.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_repset.16025472.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942:repset.16025472.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_2181_Kc12_H3K27me1.2047.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3942:1_Kc12_H3K27me1.2047.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3942 3942_2047.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3942:2047.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_pirrota_1052_S15_H3K27me1.778.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3943:pirrota_1052_S15_H3K27me1.778.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_pirrota_873_S15_Input-18cycles.644.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3943:pirrota_873_S15_Input-18cycles.644.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_2176_A22_H3K27me1.2042.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3943:2176_A22_H3K27me1.2042.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_2174_A23_Input.2040.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3943:2174_A23_Input.2040.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_2029_A22_INPUT.1883.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3943:2029_A22_INPUT.1883.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_778.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:778.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_2042.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:2042.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_repset.16025463.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_repset.16025463.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:repset.16025463.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_2177_A23_H3K27me1.2043.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3943:2177_A23_H3K27me1.2043.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3943 3943_2043.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K27me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3943:2043.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K27me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +3945 3945_repset.13435031.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945:repset.13435031.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_1424.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945:1424.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_A21_dm TopoII(DAJ).1425.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3945:A21_dm-TopoII(DAJ).1425.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3945:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_pirrota_1719_A20_dmTopo II(DAJ).1424.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3945:pirrota_1719_A20_dmTopo-II(DAJ).1424.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_repset.13435031.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3945:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3945 3945_1425.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle dmTopo-II:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3945:1425.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip dmTopo II Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_1411.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:1411.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_repset.13435401.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:repset.13435401.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_1410.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:1410.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_1528.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948:1528.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_pirrotta_1681_S18_Input(20cyc).1386.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3948:1_S18_Input(20cyc).1386.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_pirrotta_1682_S19_Input(20cyc).1387.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3948:2_S19_Input(20cyc).1387.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_pirrota__1705_S19_HP4.1410.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3948:1705_S19_HP4.1410.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_repset.13435401.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3948.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_pirrota_1821_S19_HP4.1528.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3948:1821_S19_HP4.1528.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3948 3948_pirrota__1706_S19_HP4.1411.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3948:1706_S19_HP4.1411.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_1946.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949:1946.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_repset.13893767.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_pirrota_1748_S18_Input.1453.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3949:pirrota_1748_S18_Input.1453.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_2119_A23_Input.1837.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3949:2119_A23_Input.1837.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_repset.13893767.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949:repset.13893767.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_2125_A23_LSD1-Q3430.1946.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3949:2125_A23_LSD1-Q3430.1946.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_1452.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3949:1452.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3949 3949_pirrota_1747_S18_LSD1-Q3430.1452.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL LSD1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3949:pirrota_1747_S18_LSD1-Q3430.1452.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip LSD1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_repset.9699726.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950:repset.9699726.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_pirrota_1088_A21_Input.846.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3950:8_A21_Input.846.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_pirrota_1089_A20_Input.847.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_3950:9_A20_Input.847.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_837.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950:837.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_pirrota_1078_A21_MRG15(Q2482).836.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3950:8_A21_MRG15(Q2482).836.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_836.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950:836.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_pirrota_1079_A20_MRG15(Q2482).837.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3950:9_A20_MRG15(Q2482).837.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +3950 3950_repset.9699726.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 MRG15:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3950.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip MRG15 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3951 3951_2134.L3_piwi_2_piwi.1982.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Developmental-Stage=Larvae-3rd-instar#Strain=PIWI2-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3951:4.L3_piwi_2_piwi.1982.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=PIWI2 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3951 3951_2133.L3_piwi_1_piwi.1981.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL PIWI:Developmental-Stage=Larvae-3rd-instar#Strain=PIWI2-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_3951:3.L3_piwi_1_piwi.1981.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=PIWI2 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 3951 3951_1982.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle PIWI:Developmental-Stage=Larvae-3rd-instar#Strain=PIWI2-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_3951:1982.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip PIWI Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=PIWI2 mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -9741,14 +9950,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3961 3961_LID21601_FC62W23AAXX_1_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3961:LID21601_FC62W23AAXX_1_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3961 3961_SRR316204.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3961:SRR316204.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3961 3961_LID21593_FC62WA0AAXX_1_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3961:LID21593_FC62WA0AAXX_1_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_LID21595_FC62WA0AAXX_3_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962:LID21595_FC62WA0AAXX_3_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_LID21595_FC62WA0AAXX_3_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962:LID21595_FC62WA0AAXX_3_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_LID21595.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_LID44798_FC62W23AAXX_7_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962:LID44798_FC62W23AAXX_7_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_SRR316206.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962:SRR316206.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_LID44798_FC62W23AAXX_7_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962:LID44798_FC62W23AAXX_7_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_SRR316205.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962:SRR316205.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -3962 3962_LID44798.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_LID21595_FC62WA0AAXX_3_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962:LID21595_FC62WA0AAXX_3_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_LID21595_FC62WA0AAXX_3_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962:LID21595_FC62WA0AAXX_3_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_LID21595.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_LID44798_FC62W23AAXX_7_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962:LID44798_FC62W23AAXX_7_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_SRR316206.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962:SRR316206.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_LID44798_FC62W23AAXX_7_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962:LID44798_FC62W23AAXX_7_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_SRR316205.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_3962:SRR316205.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +3962 3962_LID44798.sam.gz D.melanogaster/mRNA/RNA-seq/alignment_sam total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_3962.sam.gz alignment_sam D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 3974 3974_SRR016670.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3974:70.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3974 3974_EE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3974:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3974 3974_SRR016673.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3974:73.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9766,23 +9975,23 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 3975 3975_SRR089785.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3975:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3975 3975_N2_EE-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3975:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3975 3975_N2_EE-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3975:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_LE.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_LE.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_LE.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_SRR016674.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:74.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_SRR016675.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:75.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_SRR016676.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:76.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_SRR016687.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:87.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_LE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_SRR016677.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:77.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3977 3977_SRR016678.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:78.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_SRR124256.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_SRR124257.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_N2_LE-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_SRR124255.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_N2_LE-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_N2_LE-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -3978 3978_N2_LE-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Late-Embryos-4.5-hrs-post-early-embryo#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryos 4.5 hrs post-early embryo#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_LE.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_LE.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_LE.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_SRR016674.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:74.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_SRR016675.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:75.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_SRR016676.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:76.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_SRR016687.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:87.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_LE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_SRR016677.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:77.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3977 3977_SRR016678.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3977:78.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_SRR124256.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_SRR124257.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_N2_LE-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_SRR124255.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_N2_LE-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_N2_LE-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +3978 3978_N2_LE-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3978.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3981 3981_N2_EE_50-0.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3981:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3981 3981_SRR332921.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3981:32921.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 3981 3981_N2_EE_50-0.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_3981:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9963,6 +10172,13 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4007 4007_N2_L1-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4007.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4007 4007_SRR089823.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4007:3.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4007 4007_N2_L1-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4007:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_L2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_L2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_SRR006512.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038:2.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_L2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_SRR006513.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038:3.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_L2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4038 4038_SRR006511.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4038:1.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4039 4039_SRR125338.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4039:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4039 4039_N2_L2-4.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4039.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4039 4039_SRR125337.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4039:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9970,6 +10186,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4039 4039_N2_L2-4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4039:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4039 4039_N2_L2-4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4039:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4039 4039_N2_L2-4.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4039:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4041 4041_L3.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4041:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4041 4041_L3.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4041.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4041 4041_L3.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4041:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4041 4041_L3.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4041:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4041 4041_SRR006520.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4041:20.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4041 4041_SRR006519.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4041:19.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4042 4042_N2_L3-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4042.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4042 4042_SRR089406.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4042:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4042 4042_SRR089407.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4042:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9977,6 +10199,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4042 4042_N2_L3-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4042:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4042 4042_N2_L3-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4042:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4042 4042_N2_L3-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4042:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4044 4044_L4.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4044:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4044 4044_L4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4044:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4044 4044_L4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4044:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4044 4044_SRR006518.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4044:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4044 4044_L4.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4044.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4044 4044_SRR006517.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4044:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4045 4045_SRR023579.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4045:79.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4045 4045_L4b.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4045:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4045 4045_SRR023580.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4045:80.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -9984,23 +10212,31 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4045 4045_SRR023581.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4045:81.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4045 4045_L4b.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4045:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4045 4045_L4b.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4045.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4047 4047_SRR330557.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4047:7.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4047 4047_SRR330558.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4047:8.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4048 4048_SRR330559.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4048:59.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse male carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4048 4048_SRR330560.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4048:60.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse male carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4049 4049_SRR330562.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4049:2.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4049 4049_SRR330561.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4049:1.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4050 4050_SRR330564.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-male-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4050:4.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin male reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4050 4050_SRR330563.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dpse-Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-male-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4050:3.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Dpse Adult Female Whole Species Developmental-Stage=Dpse Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin male reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling -4051 4051_SRR330565.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4051:5.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4051 4051_SRR330566.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4051:6.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4052 4052_SRR330567.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4052:7.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim male carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4052 4052_SRR330568.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4052:8.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim male carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4053 4053_SRR330569.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4053:69.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4053 4053_SRR330570.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4053:70.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Female Whole Species Developmental-Stage=Dsim Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4054 4054_SRR330573.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-male-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4054:3.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin male reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4054 4054_SRR330572.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-male-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4054:2.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin male reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling -4054 4054_SRR330571.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dsim-Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-male-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4054:1.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Dsim Adult Male Whole Species Developmental-Stage=Dsim Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin male reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4047 4047_SRR330557.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4047:7.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4047 4047_SRR330558.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4047:8.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4048 4048_SRR330559.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4048:59.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse male carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4048 4048_SRR330560.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4048:60.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse male carcass minus reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4049 4049_SRR330562.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4049:2.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4049 4049_SRR330561.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-female-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4049:1.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin female reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4050 4050_SRR330564.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-male-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4050:4.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin male reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4050 4050_SRR330563.fastq.gz D.pseudoobscura/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=D.pseudoobscura-wild-type#Tissue=Dpse-virgin-male-reproductive-system:RNA-seq:Rep-1::Dpse_r2.4:modENCODE_4050:3.fastq.gz raw-seqfile_fastq D. pseudoobscura mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=D.pseudoobscura wild-type#Tissue=Dpse virgin male reproductive system Rep-1 Dpse_r2.4 Oliver, B. RNA expression profiling +4051 4051_SRR330565.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4051:5.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4051 4051_SRR330566.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4051:6.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4052 4052_SRR330567.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4052:7.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim male carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4052 4052_SRR330568.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-male-carcass-minus-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4052:8.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim male carcass minus reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4053 4053_SRR330569.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4053:69.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4053 4053_SRR330570.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-female-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4053:70.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Female Whole Species Developmental-Stage=Adult Female Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin female reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4054 4054_SRR330573.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-male-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4054:3.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin male reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4054 4054_SRR330572.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-male-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4054:2.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin male reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4054 4054_SRR330571.fastq.gz D.simulans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-Whole-Species#Strain=Dsim-wildtype#Tissue=Dsim-virgin-male-reproductive-system:RNA-seq:Rep-1::Dsim:modENCODE_4054:1.fastq.gz raw-seqfile_fastq D. simulans mRNA RNA-seq total-RNA Adult Male Whole Species Developmental-Stage=Adult Male Whole Species#Strain=Dsim wildtype#Tissue=Dsim virgin male reproductive system Rep-1 Dsim Oliver, B. RNA expression profiling +4055 4055_N2_L4cap4.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4055:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4055 4055_N2_L4cap4.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4055.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4055 4055_N2_L4cap4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4055:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4055 4055_N2_L4cap4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4055:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4055 4055_SRR136597.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4055.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4064 4064_SRR360811.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-72-hr-post-L1-stage-larvae#Strain=myo-3-FLAG-PABP-SL2-GFP#Tissue=Myo-3-muscle#temperature=20-degree-celsius:RNA-seq:Rep-1:input:Cele_WS220:modENCODE_4064.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 72 hr post-L1 stage larvae Developmental-Stage=Adult 72 hr post-L1 stage larvae#Strain=myo-3-FLAG-PABP-SL2-GFP#Tissue=Myo-3 muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +4065 4065_SRR360812.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=L2-20-hr-post-L1-stage-larvae#Strain=myo-3-FLAG-PABP-SL2-GFP#Tissue=Myo-3-muscle#temperature=20-degree-celsius:RNA-seq:Rep-1:input:Cele_WS220:modENCODE_4065.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA L2 20 hr post-L1 stage larvae Developmental-Stage=L2 20 hr post-L1 stage larvae#Strain=myo-3-FLAG-PABP-SL2-GFP#Tissue=Myo-3 muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +4066 4066_SRR360813.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=L3-30-hr-post-L1-stage-larvae#Strain=myo-3-FLAG-PABP-SL2-GFP#Tissue=Myo-3-muscle#temperature=20-degree-celsius:RNA-seq:Rep-1:input:Cele_WS220:modENCODE_4066.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA L3 30 hr post-L1 stage larvae Developmental-Stage=L3 30 hr post-L1 stage larvae#Strain=myo-3-FLAG-PABP-SL2-GFP#Tissue=Myo-3 muscle#temperature=20 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 4124 4124_2219_9_06_17_2_H3K9me1.2095.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)-3-9-06-17-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4124:9_9_06_17_2_H3K9me1.2095.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var) 3-9 06 17 mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 4124 4124_2218_9_06_17_1_H3K9me1.2094.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)-3-9-06-17-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4124:8_9_06_17_1_H3K9me1.2094.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var) 3-9 06 17 mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 4124 4124_pirrotta_1684_L3_Su(var)3-9_06_17_2_Input(20cyc).1389.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Developmental-Stage=Larvae-3rd-instar#Strain=Su(var)-3-9-06-17-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4124:4_L3_Su(var)3-9_06_17_2_Input(20cyc).1389.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=Su(var) 3-9 06 17 mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -10017,14 +10253,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4126 4126_446.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4126:446.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4126 4126_pirrota_646_B3_Input2(20cycles).423.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4126:46_B3_Input2(20cycles).423.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4126 4126_repset.4623894.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1a:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4126:repset.4623894.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_repset.17400491.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_2114.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127:2114.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_2236.Kc12_HP1b_Q4113.2115.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4127:6.Kc12_HP1b_Q4113.2115.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_2115.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127:2115.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_2235.Kc11_HP1b_Q4113.2114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4127:5.Kc11_HP1b_Q4113.2114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_1948_KC12_Input.1704.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4127:8_KC12_Input.1704.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_repset.17400491.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127:repset.17400491.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4127 4127_1947_Kc11_Input.1703.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4127:7_Kc11_Input.1703.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_repset.17400491.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_2114.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127:2114.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_2236.Kc12_HP1b_Q4113.2115.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4127:6.Kc12_HP1b_Q4113.2115.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_2115.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127:2115.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_2235.Kc11_HP1b_Q4113.2114.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4127:5.Kc11_HP1b_Q4113.2114.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_1948_KC12_Input.1704.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4127:8_KC12_Input.1704.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_repset.17400491.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4127:repset.17400491.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4127 4127_1947_Kc11_Input.1703.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1b:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4127:7_Kc11_Input.1703.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1b Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4129 4129_SRR006516.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4129:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4129 4129_SRR006515.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4129:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4129 4129_YA.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4129:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -10038,6 +10274,13 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4130 4130_N2_Yad-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4130:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4130 4130_SRR125482.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4130:2.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4130 4130_N2_Yad-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4130:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_N2_Yad-1RR.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_N2_Yad-1RR.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_SRR360133.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132:3.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_SRR360134.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132:4.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_N2_Yad-1RR.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_N2_Yad-1RR.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4132 4132_SRR360132.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4132:2.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4133 4133_N2_YA_RZ-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4133.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4133 4133_SRR360130.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4133:30.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4133 4133_N2_YA_RZ-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4133:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -10123,14 +10366,14 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4148 4148_DauerExitDAF2-6-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4148:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4148 4148_SRR358698.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4148:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4148 4148_SRR358697.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4148:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4150 4150_SRR351176.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4150:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-2 Developmental-Stage=AF16 YA-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4150 4150_SRR351177.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4150:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-2 Developmental-Stage=AF16 YA-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4150 4150_AF16_YA-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-YA-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4150.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 YA-2 Developmental-Stage=AF16 YA-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4151 4151_SRR359085.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4151:59085.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4151 4151_SRR327332.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4151:27332.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4151 4151_SRR359086.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4151:59086.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4151 4151_SRR327331.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4151:27331.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4151 4151_AF16_YA-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4151.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4150 4150_SRR351176.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4150:6.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-2 Developmental-Stage=AF16 YA-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4150 4150_SRR351177.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4150:7.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-2 Developmental-Stage=AF16 YA-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4150 4150_AF16_YA-2.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-YA-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4150.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 YA-2 Developmental-Stage=AF16 YA-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4151 4151_SRR359085.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4151:59085.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4151 4151_SRR327332.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4151:27332.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4151 4151_SRR359086.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4151:59086.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4151 4151_SRR327331.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4151:27331.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4151 4151_AF16_YA-1.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-YA-1#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4151.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 YA-1 Developmental-Stage=AF16 YA-1#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure 4152 4152_EmMalesHIM8.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4152.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4152 4152_EmMalesHIM8.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4152:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4152 4152_SRR027905.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4152:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -10178,9 +10421,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4160 4160_L4JK1107soma-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4160:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4160 4160_L4JK1107soma-2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4160:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4160 4160_L4JK1107soma-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4160.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4161 4161_SRR351182.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-L4-2-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4161:2.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 L4-2 stage larvae Developmental-Stage=AF16 L4-2 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4161 4161_AF16_L4-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-L4-2-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4161.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 L4-2 stage larvae Developmental-Stage=AF16 L4-2 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4161 4161_SRR351183.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-L4-2-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4161:3.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 L4-2 stage larvae Developmental-Stage=AF16 L4-2 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4161 4161_SRR351182.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-L4-2-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4161:2.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 L4-2 stage larvae Developmental-Stage=AF16 L4-2 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4161 4161_AF16_L4-2.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-L4-2-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4161.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 L4-2 stage larvae Developmental-Stage=AF16 L4-2 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4161 4161_SRR351183.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-L4-2-stage-larvae#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4161:3.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 L4-2 stage larvae Developmental-Stage=AF16 L4-2 stage larvae#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure 4162 4162_SRR016686.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4162:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4162 4162_SRR016685.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4162:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4162 4162_L4MALE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4162:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure @@ -10246,49 +10489,49 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4173 4173_N2_L4RRcap3.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4173.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4173 4173_N2_L4RRcap3.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4173:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4173 4173_N2_L4RRcap3.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4173:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4174 4174_AF16_EE-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4174.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4174 4174_SRR327138.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4174:27138.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4174 4174_SRR359074.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4174:59074.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4174 4174_SRR327139.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4174:27139.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4174 4174_SRR359073.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4174:59073.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4176 4176_repset.16024305.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176:repset.16024305.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_2095_A22_Input.1919.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4176:5_A22_Input.1919.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_2102_A23_Blanks.1926.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4176:2_A23_Blanks.1926.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_repset.16024305.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_1926.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176:1926.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_2096_A23_Input.1920.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4176:6_A23_Input.1920.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_1925.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176:1925.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4176 4176_2101_A22_Blanks.1925.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4176:1_A22_Blanks.1925.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4179 4179_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4179:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_948.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179:948.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_repset.9699620.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179:repset.9699620.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_949.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179:949.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_pirrota_1146_Kc4_H3.948.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4179:6_Kc4_H3.948.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_repset.9699620.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_pirrota_1147_Kc5_H3.949.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4179:7_Kc5_H3.949.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4179 4179_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4179:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_683.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:683.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_677.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:677.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_583_A14_Input(14cycles).372.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:583_A14_Input(14cycles).372.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_367.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:367.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_578_A14_H3K9me1.367.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:578_A14_H3K9me1.367.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_366.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:366.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_928_A18_H3K9me1.683.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:928_A18_H3K9me1.683.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_924_A17_Input(14_cycles).679.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:924_A17_Input(14_cycles).679.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_922_A17_H3K9me1.677.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:922_A17_H3K9me1.677.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_934_A18_Input(14cyc).689.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:934_A18_Input(14cyc).689.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_repset.4621228.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_pirrota_577_S12_H3K9me1.366.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:577_S12_H3K9me1.366.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4182 4182_repset.4621228.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:repset.4621228.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_repset.9275096.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_737.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183:737.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_pirrota_998_A18_H3K9me3(millipore).737.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4183:98_A18_H3K9me3(millipore).737.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_repset.9275096.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183:repset.9275096.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_678.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183:678.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_pirrota_584_A14_Input(20cycles).373.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4183:584_A14_Input(20cycles).373.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_pirrota_967_A18_Input(20cyc).728.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4183:967_A18_Input(20cyc).728.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4183 4183_pirrota_923_A14_H3K9me3.678.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4183:23_A14_H3K9me3.678.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4174 4174_AF16_EE-2.sam.gz C.briggsae/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4174.sam.gz alignment_sam C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4174 4174_SRR327138.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4174:27138.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4174 4174_SRR359074.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4174:59074.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4174 4174_SRR327139.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4174:27139.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4174 4174_SRR359073.fastq.gz C.briggsae/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=AF16-EE-2#Strain=C.-briggsae#temperature=20-degree-celsius:RNA-seq:Rep-1::Cbri_WS225:modENCODE_4174:59073.fastq.gz raw-seqfile_fastq C. briggsae mRNA RNA-seq total-RNA AF16 EE-2 Developmental-Stage=AF16 EE-2#Strain=C. briggsae#temperature=20 degree celsius Rep-1 Cbri_WS225 Waterston, R. Gene Structure +4176 4176_repset.16024305.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176:repset.16024305.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_2095_A22_Input.1919.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4176:5_A22_Input.1919.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_2102_A23_Blanks.1926.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4176:2_A23_Blanks.1926.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_repset.16024305.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_1926.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176:1926.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_2096_A23_Input.1920.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4176:6_A23_Input.1920.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_1925.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4176:1925.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4176 4176_2101_A22_Blanks.1925.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL CG10630:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4176:1_A22_Blanks.1925.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip CG10630 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4179 4179_pirrota_1038_Kc4_Input(14cyc).812.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4179:8_Kc4_Input(14cyc).812.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_948.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179:948.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_repset.9699620.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179:repset.9699620.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_949.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179:949.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_pirrota_1146_Kc4_H3.948.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4179:6_Kc4_H3.948.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_repset.9699620.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4179.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_pirrota_1147_Kc5_H3.949.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4179:7_Kc5_H3.949.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4179 4179_pirrota_1039_Kc5_Input(14cyc).813.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4179:9_Kc5_Input(14cyc).813.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_683.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:683.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_677.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:677.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_583_A14_Input(14cycles).372.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:583_A14_Input(14cycles).372.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_367.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:367.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_578_A14_H3K9me1.367.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:578_A14_H3K9me1.367.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_366.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:366.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_928_A18_H3K9me1.683.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:928_A18_H3K9me1.683.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_924_A17_Input(14_cycles).679.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:924_A17_Input(14_cycles).679.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_922_A17_H3K9me1.677.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:922_A17_H3K9me1.677.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_934_A18_Input(14cyc).689.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:934_A18_Input(14cyc).689.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_242_S12_Input(14_cycles).85.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4182:242_S12_Input(14_cycles).85.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_repset.4621228.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_pirrota_577_S12_H3K9me1.366.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4182:577_S12_H3K9me1.366.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4182 4182_repset.4621228.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me1:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4182:repset.4621228.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me1 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_repset.9275096.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_737.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183:737.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_pirrota_998_A18_H3K9me3(millipore).737.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4183:98_A18_H3K9me3(millipore).737.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_repset.9275096.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183:repset.9275096.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_678.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4183:678.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_pirrota_584_A14_Input(20cycles).373.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4183:584_A14_Input(20cycles).373.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_pirrota_967_A18_Input(20cyc).728.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4183:967_A18_Input(20cyc).728.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4183 4183_pirrota_923_A14_H3K9me3.678.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4183:23_A14_H3K9me3.678.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 4185 4185_repset.14910808.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4185.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4185 4185_1678.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4185:1678.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4185 4185_pirrota_1931_B9_HP4.1679.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4185:pirrota_1931_B9_HP4.1679.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -10297,17 +10540,17 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4185 4185_1837.B4_Input.1542.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4185:1837.B4_Input.1542.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4185 4185_1930_B4_HP4.1678.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4185:1930_B4_HP4.1678.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4185 4185_repset.14910808.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle HP4:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4185:repset.14910808.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip HP4 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_repset.9274447.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:repset.9274447.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_721.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:721.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_722.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:722.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4187:1012_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_pirrota_1009_A21_Rhino.771.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4187:1009_A21_Rhino.771.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_pirrota_961_A18_Rihno.722.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4187:961_A18_Rihno.722.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_pirrota_967_A18_Input(20cyc).728.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4187:967_A18_Input(20cyc).728.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_771.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:771.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_repset.9274447.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_pirrota_960_A17_Rhino.721.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4187:960_A17_Rhino.721.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4187 4187_pirrota_963_A17_Input(20cyc).724.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4187:963_A17_Input(20cyc).724.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_repset.9274447.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:repset.9274447.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_721.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:721.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_722.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:722.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_pirrota_1012_A21_Input(20cyc).774.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4187:1012_A21_Input(20cyc).774.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_pirrota_1009_A21_Rhino.771.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4187:1009_A21_Rhino.771.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_pirrota_961_A18_Rihno.722.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4187:961_A18_Rihno.722.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_pirrota_967_A18_Input(20cyc).728.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4187:967_A18_Input(20cyc).728.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_771.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187:771.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_repset.9274447.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4187.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_pirrota_960_A17_Rhino.721.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4187:960_A17_Rhino.721.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4187 4187_pirrota_963_A17_Input(20cyc).724.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL Rhino:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4187:963_A17_Input(20cyc).724.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip Rhino Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4188 4188_repset.9703299.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RPD3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4188:repset.9703299.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4188 4188_pirrota_602_B5_Input(20cycles).391.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4188:02_B5_Input(20cycles).391.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4188 4188_pirrota_646_B3_Input2(20cycles).423.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RPD3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4188:46_B3_Input2(20cycles).423.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RPD3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites @@ -10331,23 +10574,39 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4191 4191_EF-1-24.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4191:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4191 4191_EF-1-24.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4191:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4191 4191_SRR089358.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4191:58.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4192 4192_SRR384915.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-3:ChIP:Dmel_r5.32:modENCODE_4192:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-3 Dmel_r5.32 MacAlpine, D. Replication 4192 4192_4-7hr-ORC_DM62.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4192:DM62.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4192 4192_DM62.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_4192.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication 4192 4192_4-7hr-ORC_DM94.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4192:DM94.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4192 4192_DM94.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-3:ChIP:Dmel_r5.32:modENCODE_4192:DM94.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-3 Dmel_r5.32 MacAlpine, D. Replication 4192 4192_DM37.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_4192.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication 4192 4192_4-7hr-ORC_DM36.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4192:DM36.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication 4192 4192_4-7hr-ORC.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4192:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication 4192 4192_DM36.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Developmental-Stage=Embryos-4-7-hr#Strain=Oregon-R#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4192.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#Strain=Oregon-R#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4197 4197_pirrota_365_B2_Input.208.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4197:pirrota_365_B2_Input.208.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_pirrota_371_B1_H3K79Me3.214.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4197:pirrota_371_B1_H3K79Me3.214.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_2175_B11_Input.2041.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4197:2175_B11_Input.2041.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_214.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:214.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_pirrota_390_B2_H3K79Me3.223.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4197:pirrota_390_B2_H3K79Me3.223.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_2050.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:2050.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_repset.4162041.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_repset.4162041.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:repset.4162041.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_223.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:223.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_2184_B11_H3K79me3.2050.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4197:2184_B11_H3K79me3.2050.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement -4197 4197_pirrota_364_B1_Input.207.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3-K79-Me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4197:pirrota_364_B1_Input.207.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3 K79 Me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4193 4193_4-7hr-PolII-PS50.bed.gff.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4193:PS50.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4193:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII_DM95.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4193:DM95.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII_DM63.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4193:DM63.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_SRR384915.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-3:ChIP:Dmel_r5.32:modENCODE_4193:SRR38491.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-3 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII.bed.gff.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4193:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_DM95.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-3:ChIP:Dmel_r5.32:modENCODE_4193:DM9.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-3 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII-PS63.bed.gff.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4193:PS63.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII_DM38.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4193:DM38.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_DM37.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_4193.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_4-7hr-PolII-PS51.bed.gff.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4193:PS51.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_DM63.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_4193.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4193 4193_DM38.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Developmental-Stage=Embryos-4-7-hr#devstage=DevStage-Embryo-4-7h-SC-1#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4193.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Embryos 4-7 hr Developmental-Stage=Embryos 4-7 hr#devstage=DevStage:Embryo 4-7h:SC:1#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4197 4197_pirrota_365_B2_Input.208.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4197:pirrota_365_B2_Input.208.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_pirrota_371_B1_H3K79Me3.214.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4197:pirrota_371_B1_H3K79Me3.214.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_2175_B11_Input.2041.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4197:2175_B11_Input.2041.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_214.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:214.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_pirrota_390_B2_H3K79Me3.223.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4197:pirrota_390_B2_H3K79Me3.223.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_2050.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:2050.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_repset.4162041.smoothedM.clusters.gff3.gz D.melanogaster/Histone-Modification/ChIP-chip/computed-peaks_gff3 H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197.gff3.gz computed-peaks_gff3 D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_repset.4162041.smoothedM.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:repset.4162041.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_223.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4197:223.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_2184_B11_H3K79me3.2050.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4197:2184_B11_H3K79me3.2050.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement +4197 4197_pirrota_364_B1_Input.207.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K79me3:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4197:pirrota_364_B1_Input.207.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K79me3 Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 4198 4198_2173.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Developmental-Stage=Larvae-3rd-instar#Strain=PIWI2-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4198:2173.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=PIWI2 mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 4198 4198_2174.Mvalues.wig.gz D.melanogaster/Histone-Modification/ChIP-chip/normalized-arrayfile_wiggle H3K9me2:Developmental-Stage=Larvae-3rd-instar#Strain=PIWI2-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4198:2174.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=PIWI2 mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement 4198 4198_2131.L3-piwi_1_Input.1979.CEL.zip.gz D.melanogaster/Histone-Modification/ChIP-chip/raw-arrayfile_CEL H3K9me2:Developmental-Stage=Larvae-3rd-instar#Strain=PIWI2-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4198:1.L3-piwi_1_Input.1979.CEL.gz raw-arrayfile_CEL D. melanogaster Histone Modification ChIP-chip H3K9me2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=PIWI2 mutant Rep-1 Dmel_r5.32 Karpen, G. Histone modification and replacement @@ -10380,86 +10639,86 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4203 4203_repset.13435392.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4203.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4203 4203_pirrota_1721_L3_HP1a-1_Input(20cyc).1426.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4203:1_L3_HP1a-1_Input(20cyc).1426.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites 4203 4203_pirrota_1722_L3_HP1a-2_Input(20cyc).1427.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL HP1a:Developmental-Stage=Larvae-3rd-instar#Strain=HP1a-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4203:2_L3_HP1a-2_Input(20cyc).1427.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip HP1a Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=HP1a mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_pirrota_1650_L3_POF-2_RNA_POLII.1354.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4204:50_L3_POF-2_RNA_POLII.1354.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_pirrota_1633_L3_POF-1_Input(20cyc).1337.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4204:3_L3_POF-1_Input(20cyc).1337.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_pirrota_1634_L3_POF-2_Input(20cyc).1338.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4204:4_L3_POF-2_Input(20cyc).1338.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_pirrota_1649_L3_POF-1_RNA_POLII.1353.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4204:49_L3_POF-1_RNA_POLII.1353.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_1353.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204:1353.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_1354.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204:1354.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_repset.11731008.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204:repset.11731008.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4204 4204_repset.11731008.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 pol2:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip pol2 Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites -4207 4207_SRR350856.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4207:SRR350856.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4207 4207_LID44614_FC62V5HAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4207:LID44614_FC62V5HAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4207 4207_LID44620_FC64N4JAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4207:LID44620_FC64N4JAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4207 4207_SRR350851.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4207:SRR350851.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4208 4208_SRR350835.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4208:SRR350835.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4208 4208_LID44611_FC62V5HAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4208:LID44611_FC62V5HAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4208 4208_LID44851_FC64DY1AAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4208:LID44851_FC64DY1AAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4208 4208_SRR350858.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4208:SRR350858.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4209 4209_LID44621_FC64N4JAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4209:LID44621_FC64N4JAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4209 4209_SRR350850.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4209:SRR350850.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4209 4209_SRR350855.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4209:SRR350855.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4209 4209_LID44615_FC62V5HAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4209:LID44615_FC62V5HAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4210 4210_SRR350853.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4210:SRR350853.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4210 4210_SRR350836.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4210:SRR350836.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4210 4210_LID44618_FC64N4JAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4210:LID44618_FC64N4JAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4210 4210_LID44850_FC64DY1AAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4210:LID44850_FC64DY1AAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4211 4211_SRR350849.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4211:SRR350849.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4211 4211_LID44616_FC62V5HAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4211:LID44616_FC62V5HAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4211 4211_SRR350854.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4211:SRR350854.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4211 4211_LID44622_FC64N4JAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4211:LID44622_FC64N4JAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4212 4212_SRR350857.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4212:SRR350857.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4212 4212_LID44613_FC62V5HAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4212:LID44613_FC62V5HAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4212 4212_SRR350852.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4212:SRR350852.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4212 4212_LID44619_FC64N4JAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4212:LID44619_FC64N4JAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4213 4213_LID44697_FC64N63AAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4213:LID44697_FC64N63AAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4213 4213_SRR350842.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4213:SRR350842.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4213 4213_SRR350839.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4213:SRR350839.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4213 4213_LID44700_FC64N63AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4213:LID44700_FC64N63AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4214 4214_SRR350845.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4214:SRR350845.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4214 4214_LID44668_FC64N4MAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4214:LID44668_FC64N4MAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4214 4214_SRR350848.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4214:SRR350848.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4214 4214_LID44665_FC64N4MAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4214:LID44665_FC64N4MAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4215 4215_SRR350838.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4215:SRR350838.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4215 4215_LID44698_FC64N63AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4215:LID44698_FC64N63AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4215 4215_LID44701_FC64N63AAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4215:LID44701_FC64N63AAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4215 4215_SRR350841.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4215:SRR350841.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4216 4216_SRR350847.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4216:SRR350847.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4216 4216_LID44666_FC64N4MAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4216:LID44666_FC64N4MAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4216 4216_SRR350844.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4216:SRR350844.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4216 4216_LID44669_FC64N4MAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4216:LID44669_FC64N4MAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4217 4217_LID44699_FC64N63AAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4217:LID44699_FC64N63AAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4217 4217_SRR350840.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4217:SRR350840.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4217 4217_SRR350837.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4217:SRR350837.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4217 4217_LID44702_FC64N63AAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4217:LID44702_FC64N63AAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4218 4218_LID44667_FC64N4MAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4218:LID44667_FC64N4MAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4218 4218_SRR350846.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4218:SRR350846.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4218 4218_SRR350843.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4218:SRR350843.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4218 4218_LID44670_FC64N4MAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4218:LID44670_FC64N4MAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4219 4219_SRR350834.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4219:SRR350834.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4219 4219_LID45172_FC64DYFAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4219:LID45172_FC64DYFAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4219 4219_SRR350833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4219:SRR350833.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4219 4219_LID45173_FC64DYFAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4219:LID45173_FC64DYFAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4220 4220_SRR350825.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4220:SRR350825.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4220 4220_LID45398_FC64DYFAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4220:LID45398_FC64DYFAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4220 4220_SRR350828.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4220:SRR350828.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4220 4220_LID45401_FC64E54AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4220:LID45401_FC64E54AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4221 4221_LID45244_FC64DYFAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4221:LID45244_FC64DYFAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4221 4221_SRR350832.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4221:SRR350832.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4221 4221_SRR350830.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4221:SRR350830.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4221 4221_LID45242_FC64E55AAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4221:LID45242_FC64E55AAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4222 4222_SRR350824.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4222:SRR350824.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4222 4222_SRR350827.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4222:SRR350827.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4222 4222_LID45402_FC64E54AAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4222:LID45402_FC64E54AAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4222 4222_LID45399_FC64DYFAAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4222:LID45399_FC64DYFAAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4223 4223_LID45243_FC64DYFAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4223:LID45243_FC64DYFAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4223 4223_LID45245_FC64DYFAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4223:LID45245_FC64DYFAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4223 4223_SRR350829.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4223:SRR350829.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4223 4223_SRR350831.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4223:SRR350831.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4224 4224_LID45403_FC64E54AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4224:LID45403_FC64E54AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4224 4224_LID45400_FC64E54AAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4224:LID45400_FC64E54AAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4224 4224_SRR350823.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4224:SRR350823.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4224 4224_SRR350826.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4224:SRR350826.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4204 4204_pirrota_1650_L3_POF-2_RNA_POLII.1354.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4204:50_L3_POF-2_RNA_POLII.1354.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_pirrota_1633_L3_POF-1_Input(20cyc).1337.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4204:3_L3_POF-1_Input(20cyc).1337.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_pirrota_1634_L3_POF-2_Input(20cyc).1338.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:input:Dmel_r5.32:modENCODE_4204:4_L3_POF-2_Input(20cyc).1338.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_pirrota_1649_L3_POF-1_RNA_POLII.1353.CEL.zip.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/raw-arrayfile_CEL RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1:ChIP:Dmel_r5.32:modENCODE_4204:49_L3_POF-1_RNA_POLII.1353.CEL.gz raw-arrayfile_CEL D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_1353.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204:1353.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_1354.Mvalues.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204:1354.Mvalues.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_repset.11731008.smoothedM.wig.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/normalized-arrayfile_wiggle RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204:repset.11731008.smoothedM.wig.gz normalized-arrayfile_wiggle D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4204 4204_repset.11731008.smoothedM.clusters.gff3.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-chip/computed-peaks_gff3 RNA-polymerase-II:Developmental-Stage=Larvae-3rd-instar#Strain=POF-mutant:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4204.gff3.gz computed-peaks_gff3 D. melanogaster Non TF Chromatin binding factor ChIP-chip RNA polymerase II Larvae 3rd instar Developmental-Stage=Larvae 3rd instar#Strain=POF mutant Rep-1 Dmel_r5.32 Karpen, G. Other chromatin binding sites +4207 4207_SRR350856.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4207:SRR350856.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4207 4207_LID44614_FC62V5HAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4207:LID44614_FC62V5HAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4207 4207_LID44620_FC64N4JAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4207:LID44620_FC64N4JAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4207 4207_SRR350851.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4207:SRR350851.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4208 4208_SRR350835.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4208:SRR350835.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4208 4208_LID44611_FC62V5HAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4208:LID44611_FC62V5HAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4208 4208_LID44851_FC64DY1AAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4208:LID44851_FC64DY1AAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4208 4208_SRR350858.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4208:SRR350858.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4209 4209_LID44621_FC64N4JAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4209:LID44621_FC64N4JAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4209 4209_SRR350850.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4209:SRR350850.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4209 4209_SRR350855.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4209:SRR350855.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4209 4209_LID44615_FC62V5HAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4209:LID44615_FC62V5HAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4210 4210_SRR350853.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4210:SRR350853.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4210 4210_SRR350836.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4210:SRR350836.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4210 4210_LID44618_FC64N4JAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4210:LID44618_FC64N4JAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4210 4210_LID44850_FC64DY1AAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4210:LID44850_FC64DY1AAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4211 4211_SRR350849.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4211:SRR350849.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4211 4211_LID44616_FC62V5HAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4211:LID44616_FC62V5HAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4211 4211_SRR350854.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4211:SRR350854.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4211 4211_LID44622_FC64N4JAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4211:LID44622_FC64N4JAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4212 4212_SRR350857.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4212:SRR350857.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4212 4212_LID44613_FC62V5HAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4212:LID44613_FC62V5HAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4212 4212_SRR350852.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4212:SRR350852.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4212 4212_LID44619_FC64N4JAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4212:LID44619_FC64N4JAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4213 4213_LID44697_FC64N63AAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4213:LID44697_FC64N63AAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4213 4213_SRR350842.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4213:SRR350842.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4213 4213_SRR350839.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4213:SRR350839.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4213 4213_LID44700_FC64N63AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4213:LID44700_FC64N63AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4214 4214_SRR350845.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4214:SRR350845.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4214 4214_LID44668_FC64N4MAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4214:LID44668_FC64N4MAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4214 4214_SRR350848.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4214:SRR350848.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4214 4214_LID44665_FC64N4MAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4214:LID44665_FC64N4MAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4215 4215_SRR350838.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4215:SRR350838.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4215 4215_LID44698_FC64N63AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4215:LID44698_FC64N63AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4215 4215_LID44701_FC64N63AAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4215:LID44701_FC64N63AAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4215 4215_SRR350841.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4215:SRR350841.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4216 4216_SRR350847.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4216:SRR350847.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4216 4216_LID44666_FC64N4MAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4216:LID44666_FC64N4MAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4216 4216_SRR350844.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4216:SRR350844.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4216 4216_LID44669_FC64N4MAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4216:LID44669_FC64N4MAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4217 4217_LID44699_FC64N63AAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4217:LID44699_FC64N63AAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4217 4217_SRR350840.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4217:SRR350840.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4217 4217_SRR350837.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4217:SRR350837.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4217 4217_LID44702_FC64N63AAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4217:LID44702_FC64N63AAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4218 4218_LID44667_FC64N4MAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4218:LID44667_FC64N4MAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4218 4218_SRR350846.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4218:SRR350846.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4218 4218_SRR350843.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4218:SRR350843.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4218 4218_LID44670_FC64N4MAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4218:LID44670_FC64N4MAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4219 4219_SRR350834.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4219:SRR350834.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4219 4219_LID45172_FC64DYFAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4219:LID45172_FC64DYFAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4219 4219_SRR350833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4219:SRR350833.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4219 4219_LID45173_FC64DYFAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4219:LID45173_FC64DYFAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4220 4220_SRR350825.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4220:SRR350825.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4220 4220_LID45398_FC64DYFAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4220:LID45398_FC64DYFAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4220 4220_SRR350828.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4220:SRR350828.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4220 4220_LID45401_FC64E54AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4220:LID45401_FC64E54AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4221 4221_LID45244_FC64DYFAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4221:LID45244_FC64DYFAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4221 4221_SRR350832.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4221:SRR350832.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4221 4221_SRR350830.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4221:SRR350830.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4221 4221_LID45242_FC64E55AAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4221:LID45242_FC64E55AAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4222 4222_SRR350824.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4222:SRR350824.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4222 4222_SRR350827.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4222:SRR350827.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4222 4222_LID45402_FC64E54AAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4222:LID45402_FC64E54AAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4222 4222_LID45399_FC64DYFAAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4222:LID45399_FC64DYFAAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4223 4223_LID45243_FC64DYFAAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4223:LID45243_FC64DYFAAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4223 4223_LID45245_FC64DYFAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4223:LID45245_FC64DYFAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4223 4223_SRR350829.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4223:SRR350829.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4223 4223_SRR350831.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4223:SRR350831.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4224 4224_LID45403_FC64E54AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4224:LID45403_FC64E54AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4224 4224_LID45400_FC64E54AAXX_1.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4224:LID45400_FC64E54AAXX_1.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4224 4224_SRR350823.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4224:SRR350823.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4224 4224_SRR350826.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4224:SRR350826.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4225 4225_LID45669_FC64M2TAAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4225:LID45669_FC64M2TAAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4225 4225_LID45672_FC64M2TAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4225:LID45672_FC64M2TAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4225 4225_SRR350813.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4225:SRR350813.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure @@ -10484,208 +10743,208 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4230 4230_LID45460_FC64M2PAAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4230:LID45460_FC64M2PAAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4230 4230_LID45457_FC64M32AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4230:LID45457_FC64M32AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4230 4230_SRR350817.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4230:SRR350817.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4231 4231_SRR350801.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4231:SRR350801.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4231 4231_SRR350804.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4231:SRR350804.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4231 4231_LID45883_FC64M34AAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4231:LID45883_FC64M34AAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4231 4231_LID45880_FC64M34AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4231:LID45880_FC64M34AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4232 4232_LID45845_FC64M2PAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4232:LID45845_FC64M2PAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4232 4232_SRR350807.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4232:SRR350807.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4232 4232_SRR350810.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4232:SRR350810.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4232 4232_LID45848_FC64M2PAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4232:LID45848_FC64M2PAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4233 4233_SRR350803.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4233:SRR350803.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4233 4233_SRR350800.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4233:SRR350800.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4233 4233_LID45881_FC64M34AAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4233:LID45881_FC64M34AAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4233 4233_LID45884_FC64P15AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4233:LID45884_FC64P15AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4234 4234_SRR350809.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4234:SRR350809.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4234 4234_SRR350806.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4234:SRR350806.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4234 4234_LID45849_FC64M2PAAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4234:LID45849_FC64M2PAAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4234 4234_LID45846_FC64M2PAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4234:LID45846_FC64M2PAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4235 4235_SRR350802.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4235:SRR350802.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4235 4235_LID45885_FC64P15AAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4235:LID45885_FC64P15AAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4235 4235_LID45882_FC64M34AAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4235:LID45882_FC64M34AAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4235 4235_SRR350799.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4235:SRR350799.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4236 4236_LID45850_FC64M34AAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4236:LID45850_FC64M34AAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4236 4236_SRR350808.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4236:SRR350808.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4236 4236_SRR350805.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4236:SRR350805.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4236 4236_LID45847_FC64M34AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4236:LID45847_FC64M34AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4241 4241_SRR070435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4241:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4241 4241_SRR100279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4241.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4241 4241_SRR070434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4241:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4242 4242_SRR100274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4242:100274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4242 4242_SRR111882.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4242:1882.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4242 4242_SRR116383.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4242:6383.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4242 4242_SRR070420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4242:070420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4243 4243_SRR070415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4243.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4243 4243_SRR070414.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4243.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4231 4231_SRR350801.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4231:SRR350801.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4231 4231_SRR350804.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4231:SRR350804.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4231 4231_LID45883_FC64M34AAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4231:LID45883_FC64M34AAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4231 4231_LID45880_FC64M34AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4231:LID45880_FC64M34AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4232 4232_LID45845_FC64M2PAAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4232:LID45845_FC64M2PAAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4232 4232_SRR350807.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4232:SRR350807.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4232 4232_SRR350810.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4232:SRR350810.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4232 4232_LID45848_FC64M2PAAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cell:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4232:LID45848_FC64M2PAAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cell Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4233 4233_SRR350803.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4233:SRR350803.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4233 4233_SRR350800.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4233:SRR350800.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4233 4233_LID45881_FC64M34AAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4233:LID45881_FC64M34AAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4233 4233_LID45884_FC64P15AAXX_5.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4233:LID45884_FC64P15AAXX_5.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4234 4234_SRR350809.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4234:SRR350809.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4234 4234_SRR350806.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4234:SRR350806.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4234 4234_LID45849_FC64M2PAAXX_8.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4234:LID45849_FC64M2PAAXX_8.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4234 4234_LID45846_FC64M2PAAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=cytoplasm:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4234:LID45846_FC64M2PAAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=cytoplasm Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4235 4235_SRR350802.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4235:SRR350802.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4235 4235_LID45885_FC64P15AAXX_6.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4235:LID45885_FC64P15AAXX_6.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4235 4235_LID45882_FC64M34AAXX_7.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4235:LID45882_FC64M34AAXX_7.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4235 4235_SRR350799.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4235:SRR350799.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4236 4236_LID45850_FC64M34AAXX_3.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4236:LID45850_FC64M34AAXX_3.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4236 4236_SRR350808.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4236:SRR350808.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4236 4236_SRR350805.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4236:SRR350805.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4236 4236_LID45847_FC64M34AAXX_2.txt.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#cellular-component=nucleus:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4236:LID45847_FC64M34AAXX_2.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#cellular-component=nucleus Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4241 4241_SRR070435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4241:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4241 4241_SRR100279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4241.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4241 4241_SRR070434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4241:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4242 4242_SRR100274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4242:100274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4242 4242_SRR111882.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4242:1882.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4242 4242_SRR116383.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4242:6383.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4242 4242_SRR070420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4242:070420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4243 4243_SRR070415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4243.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4243 4243_SRR070414.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4243.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4244 4244_SRR100283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4244.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4244 4244_SRR100277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4244:100277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4244 4244_SRR070431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4244:070431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4245 4245_SRR070432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4245:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4245 4245_SRR100280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4245.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4245 4245_SRR070433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4245:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4246 4246_SRR070421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4246.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4246 4246_SRR070424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4246.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR111881.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:111881.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR182357.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4247:182357.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR070397.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4247:070397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR111880.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4247:111880.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR182358.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:182358.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR100273.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:100273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR070418.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:070418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR100272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:100272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4247 4247_SRR350959.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:350959.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4248 4248_SRR070400.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4248.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4248 4248_SRR070416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4248.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4249 4249_SRR100276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4249:100276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4249 4249_SRR350961.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4249:350961.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4249 4249_SRR350960.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4249:350960.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4249 4249_SRR070422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4249:070422.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4249 4249_SRR070423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4249:070423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4250 4250_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4250.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4250 4250_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4250.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4251 4251_SRR070394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4251.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4251 4251_SRR070398.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4251.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4252 4252_SRR070391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4252.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4252 4252_SRR070404.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4252.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4253 4253_SRR070403.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4253.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4253 4253_SRR111883.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4253:111883.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4253 4253_SRR070390.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4253:070390.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4254 4254_SRR070387.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4254.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4254 4254_SRR070402.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4254.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4255 4255_SRR111878.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4255:111878.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4255 4255_SRR070401.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4255.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4255 4255_SRR070386.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4255:070386.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4255 4255_SRR111879.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4255:111879.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4256 4256_SRR070412.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4256.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4256 4256_SRR100271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4256.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4257 4257_SRR070409.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4257.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4257 4257_SRR070410.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4257.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4258 4258_SRR070426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4258 4258_SRR100269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4259 4259_SRR070408.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4259 4259_SRR100268.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4260 4260_SRR070405.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4260 4260_SRR070406.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4245 4245_SRR070432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4245:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4245 4245_SRR100280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4245.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4245 4245_SRR070433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4245:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4246 4246_SRR070421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4246.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4246 4246_SRR070424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4246.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR111881.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:111881.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR182357.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4247:182357.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR070397.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4247:070397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR111880.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4247:111880.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR182358.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:182358.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR100273.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:100273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR070418.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:070418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR100272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:100272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4247 4247_SRR350959.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4247:350959.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4248 4248_SRR070400.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4248.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4248 4248_SRR070416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4248.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4249 4249_SRR100276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4249:100276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4249 4249_SRR350961.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4249:350961.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4249 4249_SRR350960.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4249:350960.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4249 4249_SRR070422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4249:070422.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4249 4249_SRR070423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4249:070423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4250 4250_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4250.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4250 4250_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4250.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4251 4251_SRR070394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4251.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4251 4251_SRR070398.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4251.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4252 4252_SRR070391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4252.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4252 4252_SRR070404.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4252.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4253 4253_SRR070403.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4253.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4253 4253_SRR111883.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4253:111883.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4253 4253_SRR070390.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4253:070390.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4254 4254_SRR070387.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4254.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4254 4254_SRR070402.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4254.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4255 4255_SRR111878.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4255:111878.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4255 4255_SRR070401.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4255.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4255 4255_SRR070386.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4255:070386.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4255 4255_SRR111879.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4255:111879.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4256 4256_SRR070412.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4256.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4256 4256_SRR100271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4256.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4257 4257_SRR070409.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4257.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4257 4257_SRR070410.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4257.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4258 4258_SRR070426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4258 4258_SRR100269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4259 4259_SRR070408.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4259 4259_SRR100268.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4260 4260_SRR070405.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4260 4260_SRR070406.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4261 4261_SRR350962.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4261:350962.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4261 4261_SRR350963.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4261:350963.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4261 4261_SRR070393.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4261:070393.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4261 4261_SRR111885.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4261:111885.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4261 4261_SRR111884.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4261:111884.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4261 4261_SRR070392.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4261:070392.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4262 4262_SRR070425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4262.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4262 4262_SRR070407.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4262.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4263 4263_SRR070436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4263:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4263 4263_SRR100281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4263.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4263 4263_SRR070437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4263:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4264 4264_SRR070419.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4264:070419.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4264 4264_SRR100275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4264:100275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4264 4264_SRR070388.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4264.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4265 4265_SRR100278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4265:100278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4265 4265_SRR100282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4265.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4265 4265_SRR070430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4265:070430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4266 4266_SRR070396.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=virgin-adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=virgin adult ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4266 4266_SRR070417.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=virgin-adult-ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=virgin adult ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4267 4267_SRR070429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4267.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4267 4267_SRR070413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4267.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4268 4268_SRR070428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4268 4268_SRR070411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4269 4269_SRR070427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4269 4269_SRR100270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4270 4270_SRR103726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4270 4270_SRR103727.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4271 4271_SRR103730.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4271.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4271 4271_SRR103731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4271.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4272 4272_SRR103728.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4272 4272_SRR103729.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4273 4273_SRR103732.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=caffeine#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=caffeine#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4273 4273_SRR103733.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=caffeine#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=caffeine#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4274 4274_SRR124258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4274 4274_SRR103746.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4275 4275_SRR103748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4275 4275_SRR103747.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4276 4276_SRR103725.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4276 4276_SRR124260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4277 4277_SRR103737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4277 4277_SRR103736.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4278 4278_SRR103716.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4278:16.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4278 4278_SRR103738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4278:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4278 4278_SRR103739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4278:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4278 4278_SRR103717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4278:17.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4279 4279_SRR103744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4279 4279_SRR103745.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4262 4262_SRR070425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4262.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4262 4262_SRR070407.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4262.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4263 4263_SRR070436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4263:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4263 4263_SRR100281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4263.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4263 4263_SRR070437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4263:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4264 4264_SRR070419.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4264:070419.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4264 4264_SRR100275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4264:100275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4264 4264_SRR070388.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4264.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4265 4265_SRR100278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4265:100278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4265 4265_SRR100282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4265.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4265 4265_SRR070430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4265:070430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4266 4266_SRR070396.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Virgin-adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Virgin adult ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4266 4266_SRR070417.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Virgin-adult-ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Virgin adult ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4267 4267_SRR070429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4267.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4267 4267_SRR070413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4267.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4268 4268_SRR070428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4268 4268_SRR070411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4269 4269_SRR070427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4269 4269_SRR100270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4270 4270_SRR103726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4270 4270_SRR103727.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4271 4271_SRR103730.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4271.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4271 4271_SRR103731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4271.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4272 4272_SRR103728.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4272 4272_SRR103729.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Ethanol#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Ethanol#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4273 4273_SRR103732.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Caffeine#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Caffeine#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4273 4273_SRR103733.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Caffeine#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Caffeine#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4274 4274_SRR124258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4274 4274_SRR103746.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4275 4275_SRR103748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4275 4275_SRR103747.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Caffeine#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Caffeine#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4276 4276_SRR103725.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4276 4276_SRR124260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4277 4277_SRR103737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4277 4277_SRR103736.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4278 4278_SRR103716.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4278:16.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4278 4278_SRR103738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4278:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4278 4278_SRR103739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4278:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4278 4278_SRR103717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4278:17.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Cadmium dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4279 4279_SRR103744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4279 4279_SRR103745.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Cadmium-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Cadmium dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4280 4280_SRR103709.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Temperature=-degree-celsius:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4280.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Temperature= degree celsius Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4280 4280_SRR103708.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Temperature=-degree-celsius:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4280.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Temperature= degree celsius Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4281 4281_SRR103711.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Temperature=-degree-celsius:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4281.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Temperature= degree celsius Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4281 4281_SRR103710.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Temperature=-degree-celsius:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4281.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Temperature= degree celsius Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4282 4282_SRR103712.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=copper(2+)-sulfate#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4282.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=copper(2+) sulfate#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4282 4282_SRR103713.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=copper(2+)-sulfate#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4282.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=copper(2+) sulfate#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4283 4283_SRR103741.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=copper(2+)-sulfate#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4283.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=copper(2+) sulfate#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4283 4283_SRR103740.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=copper(2+)-sulfate#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4283.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=copper(2+) sulfate#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4282 4282_SRR103712.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Copper(2+)-sulfate#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4282.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Copper(2+) sulfate#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4282 4282_SRR103713.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Copper(2+)-sulfate#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4282.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Copper(2+) sulfate#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4283 4283_SRR103741.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Copper(2+)-sulfate#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4283.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Copper(2+) sulfate#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4283 4283_SRR103740.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Copper(2+)-sulfate#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4283.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Copper(2+) sulfate#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4284 4284_SRR103724.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Temperature=36-degree-celsius:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4284.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Temperature=36 degree celsius Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4284 4284_SRR103723.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Temperature=36-degree-celsius:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4284.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Temperature=36 degree celsius Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4285 4285_SRR103721.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4285.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4285 4285_SRR103722.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4285.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4286 4286_SRR103718.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4286 4286_SRR124259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4287 4287_SRR103719.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4287 4287_SRR103720.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4288 4288_SRR103735.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4288.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4288 4288_SRR103734.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4288.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4289 4289_SRR103742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=zinc-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4289.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=zinc dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4289 4289_SRR103743.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=zinc-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4289.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=zinc dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4290 4290_SRR103715.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=zinc-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=zinc dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4290 4290_SRR103714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=zinc-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=zinc dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4291 4291_SRR070434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4291:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 1 days Developmental-Stage=Adult mated female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4291 4291_SRR100279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4291.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 1 days Developmental-Stage=Adult mated female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4291 4291_SRR070435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4291:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 1 days Developmental-Stage=Adult mated female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4292 4292_SRR070420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4292:070420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4292 4292_SRR100274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4292:100274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4292 4292_SRR116383.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4292:6383.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4292 4292_SRR111882.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4292:1882.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4293 4293_SRR070414.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4293.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 4 days Developmental-Stage=Adult mated female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4293 4293_SRR070415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4293.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 4 days Developmental-Stage=Adult mated female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4294 4294_SRR100283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4294.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 4 days Developmental-Stage=Adult mated female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4294 4294_SRR100277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4294:100277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 4 days Developmental-Stage=Adult mated female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4294 4294_SRR070431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4294:070431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated Female eclosion + 4 days Developmental-Stage=Adult mated female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4295 4295_SRR100280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4295.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4295 4295_SRR070433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4295:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4295 4295_SRR070432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4295:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4296 4296_SRR070421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4296.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 20 days Developmental-Stage=Adult Male eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4296 4296_SRR070424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4296.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 20 days Developmental-Stage=Adult Male eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR100273.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:100273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR070418.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:070418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR182357.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4297:182357.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR182358.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:182358.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR111881.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:111881.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR100272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:100272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR070397.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4297:070397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4297 4297_SRR111880.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4297:111880.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4298 4298_SRR070416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4298.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4298 4298_SRR070400.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4298.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4299 4299_SRR070423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4299:070423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4299 4299_SRR100276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4299:100276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4299 4299_SRR070422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4299.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4300 4300_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4300.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4300 4300_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4300.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4285 4285_SRR103721.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4285.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4285 4285_SRR103722.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4285.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4286 4286_SRR103718.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4286 4286_SRR124259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Paraquat#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Paraquat#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4287 4287_SRR103719.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4287 4287_SRR103720.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4288 4288_SRR103735.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4288.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4288 4288_SRR103734.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Rotenone#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4288.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Rotenone#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4289 4289_SRR103742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Zinc-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4289.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Zinc dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4289 4289_SRR103743.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Zinc-dichloride#Developmental-Stage=Adult-mixed-sex-flies,-eclosion-+-4-days#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4289.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mixed-sex flies, eclosion + 4 days Compound=Zinc dichloride#Developmental-Stage=Adult mixed-sex flies, eclosion + 4 days#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4290 4290_SRR103715.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Zinc-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Zinc dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4290 4290_SRR103714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Compound=Zinc-dichloride#Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Compound=Zinc dichloride#Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4291 4291_SRR070434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female,,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4291:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 1 days Developmental-Stage=Adult mated female,, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4291 4291_SRR100279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female,,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4291.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 1 days Developmental-Stage=Adult mated female,, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4291 4291_SRR070435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female,,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4291:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 1 days Developmental-Stage=Adult mated female,, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4292 4292_SRR070420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4292:070420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4292 4292_SRR100274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4292:100274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4292 4292_SRR116383.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4292:6383.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4292 4292_SRR111882.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4292:1882.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4293 4293_SRR070414.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4293.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4293 4293_SRR070415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4293.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4294 4294_SRR100283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4294.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4294 4294_SRR100277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4294:100277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4294 4294_SRR070431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4294:070431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult mated female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4295 4295_SRR100280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4295.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4295 4295_SRR070433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4295:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4295 4295_SRR070432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4295:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4296 4296_SRR070421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4296.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4296 4296_SRR070424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4296.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR100273.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:100273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR070418.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:070418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR182357.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4297:182357.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR182358.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:182358.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR111881.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:111881.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR100272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4297:100272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR070397.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4297:070397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4297 4297_SRR111880.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4297:111880.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4298 4298_SRR070416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4298.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4298 4298_SRR070400.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4298.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4299 4299_SRR070423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4299:070423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4299 4299_SRR100276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4299:100276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4299 4299_SRR070422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4299.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4300 4300_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4300.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4300 4300_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4300.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4301 4301_SRR070394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4301.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4301 4301_SRR070398.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4301.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4302 4302_SRR070404.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4302.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4302 4302_SRR070391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4302.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4302 4302_SRR070404.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4302.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4302 4302_SRR070391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4302.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4303 4303_SRR070390.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4303:070390.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4303 4303_SRR070403.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4303.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4303 4303_SRR111883.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4303:111883.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4304 4304_SRR070402.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4304.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4304 4304_SRR070387.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4304.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4304 4304_SRR070402.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4304.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4304 4304_SRR070387.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4304.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4305 4305_SRR111879.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4305:111879.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4305 4305_SRR070386.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4305:070386.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4305 4305_SRR070401.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4305.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4305 4305_SRR111878.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4305:111878.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4306 4306_SRR070412.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Adult-central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4306.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Adult central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4306 4306_SRR100271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Adult-central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4306.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Adult central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4306 4306_SRR070412.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Adult-central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4306.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Adult central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4306 4306_SRR100271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Adult-central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4306.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Adult central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4307 4307_SRR070410.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4307.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4307 4307_SRR070409.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4307.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4308 4308_SRR070426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4308.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4308 4308_SRR100269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4308.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4308 4308_SRR070426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4308.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4308 4308_SRR100269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4308.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4309 4309_SRR070408.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4309.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4309 4309_SRR100268.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4309.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4310 4310_SRR070405.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4310.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -10696,23 +10955,49 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4311 4311_SRR111884.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4311:111884.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4312 4312_SRR070407.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4312.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4312 4312_SRR070425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4312.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4313 4313_SRR070437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4313:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4313 4313_SRR100281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4313.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4313 4313_SRR070436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4313:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4314 4314_SRR070388.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4314.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4314 4314_SRR070419.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4314:070419.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4314 4314_SRR100275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4314:100275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4315 4315_SRR070430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4315:070430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4315 4315_SRR100278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4315:100278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4315 4315_SRR100282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4315.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4316 4316_SRR070396.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4316.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin adult ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4316 4316_SRR070417.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-adult-ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4316.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin adult ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4317 4317_SRR070413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=pupae-fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4317.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=pupae fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4317 4317_SRR070429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=pupae-fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4317.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=pupae fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4318 4318_SRR070428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4318.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4318 4318_SRR070411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4318.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4319 4319_SRR070427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4319.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4319 4319_SRR100270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4319.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4313 4313_SRR070437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4313:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4313 4313_SRR100281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4313.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4313 4313_SRR070436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4313:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4314 4314_SRR070388.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4314.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4314 4314_SRR070419.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4314:070419.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4314 4314_SRR100275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4314:100275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4315 4315_SRR070430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4315:070430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4315 4315_SRR100278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4315:100278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4315 4315_SRR100282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4315.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4316 4316_SRR070396.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4316.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin adult ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4316 4316_SRR070417.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-adult-ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4316.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin adult ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4317 4317_SRR070413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=Pupae-fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4317.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=Pupae fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4317 4317_SRR070429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=Pupae-fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4317.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=Pupae fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4318 4318_SRR070428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4318.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4318 4318_SRR070411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4318.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4319 4319_SRR070427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4319.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4319 4319_SRR100270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4319.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4351 4351_Cl8-ORC_67.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4351:67.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_DM118.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4351.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_SRR384915.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-4:ChIP:Dmel_r5.32:modENCODE_4351:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-4 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_DM142.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4351:DM142.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_66.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4351:66.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4351:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_DM141.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4351:DM141.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_DM140.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4351:DM140.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_DM118.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4351:DM118.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_DM142.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-4:ChIP:Dmel_r5.32:modENCODE_4351:DM142.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-4 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_68.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4351:68.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC_59.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4351:59.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_Cl8-ORC.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4351:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_DM141.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-3:ChIP:Dmel_r5.32:modENCODE_4351.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-3 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_DM140.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_4351.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4351 4351_DM119.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq ORC2:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc#read-length=36-base-pair:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_4351.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq ORC2 Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc#read-length=36 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_Cl8-PolII_DM143.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4352:DM143.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_Cl8-PolII.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4352:.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_Cl8-PolII_70.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4352:70.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_DM121.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4352.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_SRR384915.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_4352:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_Cl8-PolII.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4352:.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_DM143.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-2:ChIP:Dmel_r5.32:modENCODE_4352:DM143.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_Cl8-PolII_61.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-seq/computed-peaks_gff3 RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1::Dmel_r5.32:modENCODE_4352:61.gff3.gz computed-peaks_gff3 D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_Cl8-PolII_DM120.wig.gz D.melanogaster/DNA-Replication/ChIP-seq/coverage-graph_wiggle RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1:ChIP:Dmel_r5.32:modENCODE_4352:DM120.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4352 4352_DM120.fastq.gz D.melanogaster/DNA-Replication/ChIP-seq/raw-seqfile_fastq RNA-polymerase-II:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:ChIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_4352.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication ChIP-seq RNA polymerase II Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Replication 4353 4353_SRR103727.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=10%-EtOH:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4353.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=10% EtOH Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4353 4353_SRR103726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=10%-EtOH:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4353.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=10% EtOH Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4354 4354_SRR103731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=2.5%-EtOH:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4354.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=2.5% EtOH Rep-2 Dmel_r5.32 Celniker, S. Gene Structure @@ -10757,52 +11042,52 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4372 4372_SRR103742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=4.5-mM-Zinc-salt:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4372.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=4.5 mM Zinc salt Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4373 4373_SRR103714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=5-mM-Zinc-salt:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4373.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=5 mM Zinc salt Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4373 4373_SRR103715.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=5-mM-Zinc-salt:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4373.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=5 mM Zinc salt Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4391 4391_SRR070272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4391.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4392 4392_SRR070288.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4392:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4392 4392_SRR070282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4392:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4393 4393_SRR070260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4393:070260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4393 4393_SRR111868.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4393:111868.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4393 4393_SRR070268.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4393:070268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4394 4394_SRR070265.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4394:65.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4394 4394_SRR070278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4394:78.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4395 4395_SRR111873.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4395:111873.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4395 4395_SRR070269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4395:070269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4395 4395_SRR070261.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4395:070261.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4396 4396_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4396:070258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4396 4396_SRR111869.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4396:111869.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4396 4396_SRR189833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4396:189833.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Mbn2#Developmental-Stage=Late Embryonic stage#Tissue=embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4397 4397_SRR070275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4391 4391_SRR070272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4391.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4392 4392_SRR070288.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4392:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4392 4392_SRR070282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4392:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4393 4393_SRR070260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4393:070260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4393 4393_SRR111868.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4393:111868.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4393 4393_SRR070268.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4393:070268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4394 4394_SRR070265.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4394:65.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4394 4394_SRR070278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=GM2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4394:78.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=GM2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4395 4395_SRR111873.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4395:111873.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4395 4395_SRR070269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4395:070269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4395 4395_SRR070261.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4395:070261.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4396 4396_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4396:070258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4396 4396_SRR111869.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4396:111869.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4396 4396_SRR189833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4396:189833.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4397 4397_SRR070275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4398 4398_SRR070270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG2-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4398:070270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG2-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4398 4398_SRR070262.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG2-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4398:070262.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG2-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4398 4398_SRR111870.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG2-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4398:111870.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG2-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4399 4399_SRR070290.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4399:070290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4399 4399_SRR111874.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4399:111874.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4399 4399_SRR070284.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=eye-antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4399:070284.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4400 4400_SRR070283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4400:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4400 4400_SRR070289.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4400:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4401 4401_SRR070291.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4401:91.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4401 4401_SRR070285.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4401:85.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4402 4402_SRR111871.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4402:111871.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4402 4402_SRR070267.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4402:070267.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4403 4403_SRR070276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4403.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4404 4404_SRR070287.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4404:070287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4404 4404_SRR111875.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4404:111875.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4404 4404_SRR070281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4404:070281.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4405 4405_SRR111876.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4405:111876.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4405 4405_SRR070273.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=imaginal-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4405:070273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4406 4406_SRR070277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4406.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4407 4407_SRR070274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4407.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4408 4408_SRR070280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4408:070280.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4408 4408_SRR111877.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4408:111877.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4408 4408_SRR070286.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4408:070286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4409 4409_SRR070279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4409:070279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4409 4409_SRR124149.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4409:124149.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4409 4409_SRR070266.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4409:070266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4410 4410_SRR189835.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:189835.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4410 4410_SRR189834.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:189834.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4410 4410_SRR070259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:070259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4410 4410_SRR111872.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:111872.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4411 4411_SRR070271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4411.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4399 4399_SRR070290.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4399:070290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4399 4399_SRR111874.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4399:111874.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4399 4399_SRR070284.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD11#Developmental-Stage=Larvae-3rd-instar#Tissue=Eye-antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4399:070284.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD11#Developmental-Stage=Larvae 3rd instar#Tissue=Eye-antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4400 4400_SRR070283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4400:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4400 4400_SRR070289.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4400:9.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4401 4401_SRR070291.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4401:91.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4401 4401_SRR070285.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4401:85.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4402 4402_SRR111871.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4402:111871.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4402 4402_SRR070267.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4402:070267.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4403 4403_SRR070276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD21#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4403.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD21#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4404 4404_SRR070287.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4404:070287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4404 4404_SRR111875.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4404:111875.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4404 4404_SRR070281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD32#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4404:070281.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD32#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4405 4405_SRR111876.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4405:111876.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4405 4405_SRR070273.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4405:070273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4406 4406_SRR070277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4406.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4407 4407_SRR070274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4407.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4408 4408_SRR070280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4408:070280.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4408 4408_SRR111877.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4408:111877.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4408 4408_SRR070286.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4408:070286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4409 4409_SRR070279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4409:070279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4409 4409_SRR124149.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4409:124149.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4409 4409_SRR070266.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4409:070266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4410 4410_SRR189835.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:189835.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4410 4410_SRR189834.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:189834.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4410 4410_SRR070259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:070259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4410 4410_SRR111872.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4410:111872.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4411 4411_SRR070271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4411.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4412 4412_SRR070272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=1182-4H:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4412.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=1182-4H Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4413 4413_SRR070288.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4413:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=CME-L1 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4413 4413_SRR070282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4413:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=CME-L1 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -10811,6 +11096,12 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4414 4414_SRR070260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4414:070260.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=CME-W2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4415 4415_SRR070278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=GM2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4415:78.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=GM2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4415 4415_SRR070265.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=GM2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4415:65.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=GM2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4416 4416_SRR111873.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4416:111873.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=Kc167 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4416 4416_SRR070269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4416:070269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=Kc167 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4416 4416_SRR070261.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4416:070261.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=Kc167 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4417 4417_SRR189833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4417:189833.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4417 4417_SRR111869.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4417:111869.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4417 4417_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4417:070258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4418 4418_SRR070275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD17-c3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=ML-DmD17-c3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4419 4419_SRR111870.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmBG2-c2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4419:111870.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=ML-DmBG2-c2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4419 4419_SRR070270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmBG2-c2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4419:070270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=ML-DmBG2-c2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -10838,58 +11129,62 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4430 4430_SRR124149.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4430:124149.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=S2R Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4430 4430_SRR070279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4430:070279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=S2R Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4430 4430_SRR070266.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4430:070266.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=S2R Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4431 4431_SRR111872.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4431:111872.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=S3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4431 4431_SRR189834.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4431:189834.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=S3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4431 4431_SRR070259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4431:070259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=S3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4431 4431_SRR189835.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4431:189835.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Cell-Line=S3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4432 4432_SRR070271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Sg4:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4432.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Sg4 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR023737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23737.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR023595.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23595.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR024220.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:24220.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR023680.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23680.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR035393.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:35393.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR023828.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23828.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR023662.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23662.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4433 4433_SRR023702.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23702.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR023757.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3757.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR023712.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3712.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR029232.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:9232.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR023681.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3681.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR023674.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3674.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR029236.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:9236.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR023598.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3598.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4434 4434_SRR023548.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3548.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 30 days Developmental-Stage=Adult Female eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR023730.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3730.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR023607.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3607.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR029230.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:9230.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR023645.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3645.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR029234.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:9234.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR023651.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR023547.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3547.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4435 4435_SRR023717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3717.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female eclosion + 5 days Developmental-Stage=Adult Female eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR023678.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23678.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR023741.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23741.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR023648.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23648.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR023543.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23543.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR023664.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23664.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR035394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:35394.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4436 4436_SRR023825.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23825.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR024218.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:24218.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR023714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23714.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR023601.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23601.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR035395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:35395.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR023650.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23650.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR023823.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23823.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR023752.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23752.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4437 4437_SRR023698.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23698.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 30 days Developmental-Stage=Adult Male eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023672.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3672.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023713.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3713.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023642.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3642.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR029235.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9235.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR029231.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9231.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023605.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3605.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023679.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3679.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023606.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3606.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR029176.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9176.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023658.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3658.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR029233.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9233.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4438 4438_SRR023550.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3550.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male eclosion + 5 days Developmental-Stage=Adult Male eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR023737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23737.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR023595.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23595.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR024220.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:24220.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR023680.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23680.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR035393.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:35393.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR023828.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23828.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR023662.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23662.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4433 4433_SRR023702.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4433:23702.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 1 days Developmental-Stage=Adult Female, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR023757.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3757.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR023712.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3712.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR029232.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:9232.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR023681.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3681.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR023674.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3674.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR029236.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:9236.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR023598.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3598.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4434 4434_SRR023548.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4434:3548.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 30 days Developmental-Stage=Adult Female, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR023730.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3730.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR023607.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3607.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR029230.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:9230.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR023645.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3645.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR029234.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:9234.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR023651.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR023547.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3547.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4435 4435_SRR023717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4435:3717.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 5 days Developmental-Stage=Adult Female, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR023678.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23678.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR023741.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23741.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR023648.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23648.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR023543.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23543.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR023664.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23664.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR035394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:35394.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4436 4436_SRR023825.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-1-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4436:23825.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 1 days Developmental-Stage=Adult Male, eclosion + 1 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR024218.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:24218.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR023714.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23714.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR023601.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23601.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR035395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:35395.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR023650.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23650.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR023823.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23823.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR023752.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23752.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4437 4437_SRR023698.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-30-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4437:23698.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 30 days Developmental-Stage=Adult Male, eclosion + 30 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023672.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3672.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023713.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3713.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023642.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3642.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR029235.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9235.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR029231.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9231.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023605.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3605.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023679.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3679.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023606.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3606.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR029176.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9176.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023658.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3658.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR029233.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:9233.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4438 4438_SRR023550.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-5-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4438:3550.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 5 days Developmental-Stage=Adult Male, eclosion + 5 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4439 4439_SRR023747.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4439:23747.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4439 4439_SRR027110.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4439:27110.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4439 4439_SRR035418.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4439:35418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11011,34 +11306,34 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4452 4452_SRR023824.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4452:23824.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4452 4452_SRR023761.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4452:23761.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4452 4452_SRR035411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Larvae-L2-stage#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4452:35411.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae L2 stage Developmental-Stage=Larvae L2 stage#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4453 4453_SRR023677.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3677.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4453 4453_SRR023760.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3760.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4453 4453_SRR023731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3731.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4453 4453_SRR023649.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3649.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4453 4453_SRR023507.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3507.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4453 4453_SRR027111.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:7111.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , 12 hr post-molt stage larvae Developmental-Stage=L3 stage , 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR035413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:35413.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023546.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23546.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023697.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23697.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023638.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23638.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023758.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23758.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023608.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23608.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23726.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4454 4454_SRR023640.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23640.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage , dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR023690.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3690.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR023683.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3683.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR023692.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3692.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR023505.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3505.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR023676.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3676.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR027108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:7108.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4455 4455_SRR023742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3742.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage , light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR023865.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23865.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR023739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23739.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR023782.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23782.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR023729.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23729.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR026433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:26433.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR035219.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:35219.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4456 4456_SRR035392.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-,-clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:35392.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage , clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage , clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4453 4453_SRR023677.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3677.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4453 4453_SRR023760.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3760.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4453 4453_SRR023731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3731.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4453 4453_SRR023649.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3649.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4453 4453_SRR023507.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:3507.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4453 4453_SRR027111.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--12-hr-post-molt-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4453:7111.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage 12 hr post-molt stage larvae Developmental-Stage=L3 stage 12 hr post-molt stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR035413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:35413.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023546.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23546.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023697.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23697.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023638.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23638.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023758.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23758.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023608.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23608.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23726.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4454 4454_SRR023640.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--dark-blue-gut-PS(1-2)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4454:23640.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage dark blue gut PS(1-2) stage larvae Developmental-Stage=L3 stage dark blue gut PS(1-2) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR023690.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3690.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR023683.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3683.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR023692.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3692.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR023505.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3505.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR023676.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3676.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR027108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:7108.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4455 4455_SRR023742.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--light-blue-gut-PS(3-6)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4455:3742.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage light blue gut PS(3-6) stage larvae Developmental-Stage=L3 stage light blue gut PS(3-6) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR023865.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23865.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR023739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23739.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR023782.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23782.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR023729.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:23729.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR026433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:26433.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR035219.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:35219.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4456 4456_SRR035392.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage--clear-gut-PS(7-9)-stage-larvae#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4456:35392.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage clear gut PS(7-9) stage larvae Developmental-Stage=L3 stage clear gut PS(7-9) stage larvae#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4457 4457_SRR023689.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-12-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4457:23689.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 12 hr Developmental-Stage=White prepupae (WPP) + 12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4457 4457_SRR023544.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-12-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4457:23544.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 12 hr Developmental-Stage=White prepupae (WPP) + 12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4457 4457_SRR023647.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-12-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4457:23647.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 12 hr Developmental-Stage=White prepupae (WPP) + 12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11052,33 +11347,712 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4458 4458_SRR035415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-24-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4458:35415.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 24 hr Developmental-Stage=White prepupae (WPP) + 24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4458 4458_SRR023830.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-24-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4458:23830.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 24 hr Developmental-Stage=White prepupae (WPP) + 24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4458 4458_SRR023708.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-24-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4458:23708.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 24 hr Developmental-Stage=White prepupae (WPP) + 24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4459 4459_SRR023667.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3667.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4459 4459_SRR026431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:6431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4459 4459_SRR023829.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3829.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4459 4459_SRR023785.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3785.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4459 4459_SRR023721.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3721.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4459 4459_SRR023743.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3743.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 2 days Developmental-Stage=Pupae, White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR035391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:35391.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR035218.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:35218.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR023738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23738.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR023744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23744.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR024216.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:24216.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR023783.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23783.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR023748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23748.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4460 4460_SRR026430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:26430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 3 days Developmental-Stage=Pupae, White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR035416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:35416.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR023740.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23740.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR023609.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23609.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR023827.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23827.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR023735.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23735.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR023653.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23653.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4461 4461_SRR023723.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Pupae,-White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23723.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Pupae, White prepupae (WPP) + 4 days Developmental-Stage=Pupae, White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4462 4462_SRR026432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:26432.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4462 4462_SRR023784.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23784.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4462 4462_SRR023695.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23695.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4462 4462_SRR035217.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:35217.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4462 4462_SRR023837.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23837.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4462 4462_SRR023704.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(White-prepupae-(WPP))#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23704.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (White prepupae (WPP))#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4459 4459_SRR023667.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3667.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4459 4459_SRR026431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:6431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4459 4459_SRR023829.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3829.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4459 4459_SRR023785.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3785.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4459 4459_SRR023721.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3721.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4459 4459_SRR023743.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4459:3743.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR035391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:35391.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR035218.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:35218.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR023738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23738.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR023744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23744.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR024216.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:24216.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR023783.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23783.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR023748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:23748.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4460 4460_SRR026430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-3-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4460:26430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 3 days Developmental-Stage=White prepupae (WPP) + 3 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR035416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:35416.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR023740.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23740.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR023609.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23609.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR023827.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23827.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR023735.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23735.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR023653.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23653.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4461 4461_SRR023723.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-4-days#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4461:23723.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 4 days Developmental-Stage=White prepupae (WPP) + 4 days#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4462 4462_SRR026432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:26432.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4462 4462_SRR023784.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23784.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4462 4462_SRR023695.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23695.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4462 4462_SRR035217.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:35217.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4462 4462_SRR023837.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23837.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4462 4462_SRR023704.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4462:23704.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4493 4493_EE.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_SRR016682.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_EE.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_EE.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_EE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_EE.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_EE.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4493 4493_EE.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4493:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_SRR023536.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4494 4494_AdultSPE9.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4494:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_SRR027188.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4500 4500_DauerDAF2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4500.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_DauerDAF2-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_DauerDAF2-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_SRR360123.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_DauerDAF2-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_DauerDAF2-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_DauerDAF2-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4501 4501_DauerDAF2-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4501:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_DauerDAF2-2-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_DauerDAF2-2-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_SRR360120.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_DauerDAF2-2-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_DauerDAF2-2-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_DauerDAF2-2-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4502 4502_DauerDAF2-2-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4502:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_SRR360124.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4503 4503_DauerDAF2-5-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4503.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2_DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2_DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2_DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2_DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2_DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_SRR360120.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2_DauerDAF2-2_DauerDAF2-2-1_DauerDAF2-5-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2-2-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2-2-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:2-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4504 4504_DauerDAF2-2-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4504:2-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_SRR027190.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4505 4505_DauerEntryDAF2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4505:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_SRR358688.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4506 4506_DauerEntryDAF2-1-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4506:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_SRR124275.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4507 4507_DauerEntryDAF2-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4507:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_SRR358693.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4508 4508_DauerEntryDAF2-4-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4508:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_SRR027191.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4510 4510_DauerExitDAF2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4510:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4511 4511_DauerExitDAF2-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4511:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4511 4511_SRR089798.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4511.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4511 4511_DauerExitDAF2-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4511:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4511 4511_DauerExitDAF2-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4511:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_SRR358687.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4512 4512_DauerExitDAF2-3-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4512:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_SRR358698.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4513 4513_DauerExitDAF2-6-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4513:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_SRR089304.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4515 4515_DC-1-5.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4515:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_SRR085466.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4516 4516_DC-2-12.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4516:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_SRR316756.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_DSN-Negative-Positive.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_DSN-Negative-Positive.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_DSN-Negative-Positive.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_DSN-Negative-Positive.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_DSN-Negative-Positive.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4517 4517_DSN-Negative-Positive.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=4-cell-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4517:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA 4 cell Embryos Developmental-Stage=4 cell Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_SRR089358.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4519 4519_EF-1-24.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4519:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_SRR027904.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4520 4520_EmMalesHIM8.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4520:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_SRR125491.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4521 4521_EmMalesHIM8-2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4521:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos Developmental-Stage=Embryos#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8_EmMalesHIM8-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:2.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_SRR089797.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8_EmMalesHIM8-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:2.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8_EmMalesHIM8-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:EmMalesHIM8-2.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8_EmMalesHIM8-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:EmMalesHIM8-2.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4522 4522_EmMalesHIM8_EmMalesHIM8-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Embryos-him-8(e1480)-EmMalesHIM8-2-hr#Strain=him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4522:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Embryos him-8(e1480) Developmental-Stage=Embryos him-8(e1480) EmMalesHIM8-2 hr#Strain=him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_SRR031113.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4523 4523_Harpo.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4523:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_SRR031115.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4524 4524_HarpoEcoliCntl.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4524:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_SRR351939.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4525 4525_Hsph.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4525:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_SRR351935.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4526 4526_HsphEcoliCntl.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4526:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_SRR016679.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4527 4527_L1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4527:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_SRR137925.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4528 4528_L1LIN35-1cap1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Lin-35(n745)--mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4528:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Lin-35(n745) mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Lin-35(n745) mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1_N2_L1-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1.alignments.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1_N2_L1-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1_N2_L1-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:N2_L1-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1_N2_L1-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_SRR016679.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4529 4529_L1_N2_L1-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4529:N2_L1-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_SRR006512.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4530 4530_L2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4530:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_L2_N2_L2-4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:L2_N2_L2-4.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_N2_L2-4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:N2_L2-4.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_3528.merged.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_L2_N2_L2-4.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_L2_N2_L2-4.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_SRR125339.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_L2_N2_L2-4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:L2_N2_L2-4.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_L2_N2_L2-4.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4531 4531_N2_L2-4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L2-4-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4531:N2_L2-4.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L2-4 stage larvae Developmental-Stage=L2-4 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_SRR006519.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4532 4532_L3.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L3-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4532:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L3 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-L3 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_L3_N2_L3-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:L3_N2_L3-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_L3_N2_L3-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:L3_N2_L3-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_L3_N2_L3-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_3529.merged.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_SRR089407.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_L3_N2_L3-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_L3_N2_L3-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_N2_L3-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:N2_L3-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4533 4533_N2_L3-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L3-1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4533:N2_L3-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L3-1 stage larvae Developmental-Stage=L3-1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_L4.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_L4.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_SRR006517.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_L4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_L4.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_L4.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4534 4534_L4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4534:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_SRR023581.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4535 4535_L4b.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4535:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_L4JK1107soma.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4536 4536_SRR031123.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4536.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4537 4537_SRR089799.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4537.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4537 4537_L4JK1107soma-2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4537:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4537 4537_L4JK1107soma-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4537:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4537 4537_L4JK1107soma-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4537.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4537 4537_L4JK1107soma-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4537:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma_L4JK1107soma-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:L4JK1107soma-2.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:2.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma_L4JK1107soma-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:2.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma_L4JK1107soma-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_SRR089799.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma_L4JK1107soma-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4538 4538_L4JK1107soma_L4JK1107soma-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=L4-soma-JK1107-no-DNaseI-L4JK1107soma-2-stage-larvae#Strain=JK1107#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4538:L4JK1107soma-2.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA L4 soma JK1107 no DNaseI stage larvae Developmental-Stage=L4 soma JK1107 no DNaseI L4JK1107soma-2 stage larvae#Strain=JK1107#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_SRR016686.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4540 4540_L4MALE.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4540:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_SRR124273.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4541 4541_L4MALE5.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-30-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4541:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 30 hr post-L1 stage larvae Developmental-Stage=Male mid-L4 30 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_SRR139148.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4542 4542_L4MALE6cap2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=dpy28(y1)-him-8(e1489)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4542:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=dpy28(y1) him-8(e1489)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE_L4MALE5.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:L4MALE5.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE_L4MALE5.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_SRR124273.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE_L4MALE5.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE5.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:5.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE_L4MALE5.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:L4MALE5.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE5.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:5.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE5.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4543 4543_L4MALE_L4MALE5.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Male--mid-L4-L4MALE5-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4543:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Male mid-L4 L4MALE5 stage larvae Developmental-Stage=Male mid-L4 L4MALE5 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_SRR016677.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4544 4544_LE.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4544:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_SRR016691.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4546 4546_LIN35.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4.0-hrs-post-L1-stage-larvae#Strain=MT10430#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4546:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4.0 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4.0 hrs post-L1 stage larvae#Strain=MT10430#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_SRR089785.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4547 4547_N2_EE-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4547:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4548 4548_N2_EE-2cap5.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4548:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4548 4548_SRR089796.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4548.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4548 4548_N2_EE-2cap5.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4548:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4548 4548_N2_EE-2cap5.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4548:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4548 4548_N2_EE-2cap5.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4548:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4548 4548_N2_EE-2cap5.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4548:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Early Embryos Developmental-Stage=Early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_SRR332922.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4549 4549_N2_EE_50-0.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-0#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4549.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-0 Developmental-Stage=N2 EE 50-0#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_SRR350977.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4550 4550_N2_EE_50-120.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-120#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4550:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-120 Developmental-Stage=N2 EE 50-120#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_SRR351024.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4551 4551_N2_EE_50-150.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-150#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4551.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-150 Developmental-Stage=N2 EE 50-150#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_SRR351009.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4552 4552_N2_EE_50-180.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-180#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4552:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-180 Developmental-Stage=N2 EE 50-180#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4553 4553_SRR351029.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-210#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4553.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-210 Developmental-Stage=N2 EE 50-210#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4553 4553_N2_EE_50-210.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-210#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4553:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-210 Developmental-Stage=N2 EE 50-210#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4553 4553_N2_EE_50-210.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-210#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4553:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-210 Developmental-Stage=N2 EE 50-210#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4553 4553_N2_EE_50-210.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-210#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4553:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-210 Developmental-Stage=N2 EE 50-210#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_SRR351011.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4554 4554_N2_EE_50-240.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-240#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4554.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-240 Developmental-Stage=N2 EE 50-240#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_N2_EE_50-270.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4555 4555_SRR351030.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-270#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4555.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-270 Developmental-Stage=N2 EE 50-270#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_SRR332923.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4556 4556_N2_EE_50-30.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-30#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4556:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-30 Developmental-Stage=N2 EE 50-30#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_SRR352279.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4557 4557_N2_EE_50-300.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-300#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4557:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-300 Developmental-Stage=N2 EE 50-300#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_SRR351001.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4558 4558_N2_EE_50-330.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-330#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4558:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-330 Developmental-Stage=N2 EE 50-330#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_SRR351003.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4559 4559_N2_EE_50-360.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-360#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4559:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-360 Developmental-Stage=N2 EE 50-360#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_SRR351007.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4561 4561_N2_EE_50-420.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-420#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4561.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-420 Developmental-Stage=N2 EE 50-420#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_N2_EE_50-450.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4562 4562_SRR351035.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-450#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4562.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-450 Developmental-Stage=N2 EE 50-450#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_SRR359090.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4563 4563_N2_EE_50-480.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-480#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4563:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-480 Developmental-Stage=N2 EE 50-480#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4564 4564_N2_EE_50-510.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-510#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4564:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-510 Developmental-Stage=N2 EE 50-510#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4564 4564_SRR351039.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-510#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4564.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-510 Developmental-Stage=N2 EE 50-510#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4564 4564_N2_EE_50-510.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-510#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4564:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-510 Developmental-Stage=N2 EE 50-510#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4564 4564_N2_EE_50-510.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-510#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4564:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-510 Developmental-Stage=N2 EE 50-510#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_SRR359087.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4565 4565_N2_EE_50-540.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-540#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4565:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-540 Developmental-Stage=N2 EE 50-540#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_SRR359089.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4566 4566_N2_EE_50-570.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-570#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4566.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-570 Developmental-Stage=N2 EE 50-570#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_SRR350990.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4567 4567_N2_EE_50-600.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-600#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4567:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-600 Developmental-Stage=N2 EE 50-600#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_SRR316196.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4568 4568_N2_EE_50-60.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-60#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4568.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-60 Developmental-Stage=N2 EE 50-60#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_SRR350994.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4569 4569_N2_EE_50-630.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-630#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4569:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-630 Developmental-Stage=N2 EE 50-630#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_SRR350999.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4570 4570_N2_EE_50-660.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-660#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4570:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-660 Developmental-Stage=N2 EE 50-660#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_SRR351021.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4571 4571_N2_EE_50-690.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-690#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4571.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-690 Developmental-Stage=N2 EE 50-690#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_SRR351041.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4572 4572_N2_EE_50-720.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-720#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4572:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-720 Developmental-Stage=N2 EE 50-720#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_N2_EE_50-90.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4573 4573_SRR350958.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=N2-EE-50-90#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4573.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA N2 EE 50-90 Developmental-Stage=N2 EE 50-90#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_SRR089822.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4574 4574_N2_L1-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4574:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_SRR125339.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4575 4575_N2_L2-4.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L2-17.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4575:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L2 17.75 hr post-L1 stage larvae Developmental-Stage=Mid-L2 17.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_SRR089406.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4576 4576_N2_L3-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-N2-L3-1-26.75-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4576.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-N2 L3-1 26.75 hr post-L1 stage larvae Developmental-Stage=Mid-N2 L3-1 26.75 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_SRR136597.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4577 4577_N2_L4cap4.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4577:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_SRR136598.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4578 4578_N2_L4RRcap3.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Mid-L4-34.25-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4578:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Mid-L4 34.25 hr post-L1 stage larvae Developmental-Stage=Mid-L4 34.25 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_SRR124255.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4579 4579_N2_LE-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4579:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4580 4580_N2_LE-2cap6.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4580:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4580 4580_N2_LE-2cap6.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4580:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4580 4580_N2_LE-2cap6.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4580:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4580 4580_SRR136599.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4580.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4580 4580_N2_LE-2cap6.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4580:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4580 4580_N2_LE-2cap6.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Late-Embryonic-stage-4.5-hrs-post-early-Embryos#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4580:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Late Embryos 4.5 hr post-early Embryo Developmental-Stage=Late Embryonic stage 4.5 hrs post-early Embryos#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_SRR125482.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4581 4581_N2_Yad-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4581:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_SRR360134.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4582 4582_N2_Yad-1RR.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4582:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_SRR360129.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4583 4583_N2_YA_RZ-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4583:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_SRR089353.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4584 4584_OPDC-2-12.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=fer-15(b26)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4584:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=fer-15(b26)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_SRR316929.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.alignments.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4585 4585_PharyngealMuscle.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4585:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA PharyngealMuscle Developmental-Stage=PharyngealMuscle#Strain=OK0640#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_SRR089361.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4586 4586_PL-2-24.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4586:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SRR031119.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4591 4591_SmacDb10.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4591.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SRR031121.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4592 4592_SmacDb10EcoliCntl.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4592:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_YA.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4593 4593_SRR006516.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult-(pre-gravid)-46-hrs-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4593.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult (pre-gravid) 46 hr post-L1 stage larvae Developmental-Stage=Young Adult (pre-gravid) 46 hrs post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4594 4594_N2_Yad-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4594:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4594 4594_N2_Yad-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4594:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4594 4594_YA_N2_Yad-1.confirmed_splice_leaders.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4594:splice_leaders.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4594 4594_YA_N2_Yad-1.confirmed_introns_all.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4594:introns_all.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4594 4594_SRR125481.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4594.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4594 4594_YA_N2_Yad-1.confirmed_polya.gff3.gz C.elegans/mRNA/RNA-seq/gene-model_gff3 total-RNA:Developmental-Stage=Young-Adult#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4594:polya.gff3.gz gene-model_gff3 C. elegans mRNA RNA-seq total-RNA Young Adult Developmental-Stage=Young Adult#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4595 4595_SRR034220.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4595.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4596 4596_SRR034225.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-10-12-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4596.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 10-12 hr Developmental-Stage=Embryos 10-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4597 4597_SRR034226.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-12-14-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4597.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 12-14 hr Developmental-Stage=Embryos 12-14 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11091,53 +12065,53 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4604 4604_SRR034222.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-4-6-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4604.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 4-6 hr Developmental-Stage=Embryos 4-6 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4605 4605_SRR034223.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-6-8-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4605.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 6-8 hr Developmental-Stage=Embryos 6-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4606 4606_SRR034224.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Embryos-8-10-hr#Strain=Y-cn-bw-sp:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4606.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Embryos 8-10 hr Developmental-Stage=Embryos 8-10 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4607 4607_SRR034220.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-0-2-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4607.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 0-2 hr Developmental-Stage=Embryos 0-2 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4608 4608_SRR034225.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-0-12-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4608.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 0-12 hr Developmental-Stage=Embryos 0-12 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4609 4609_SRR034226.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-12-14-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4609.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 12-14 hr Developmental-Stage=Embryos 12-14 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4610 4610_SRR034227.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-14-16-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4610.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 14-16 hr Developmental-Stage=Embryos 14-16 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4611 4611_SRR034228.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-16-18-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4611.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 16-18 hr Developmental-Stage=Embryos 16-18 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4612 4612_SRR034229.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-18-20-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4612.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 18-20 hr Developmental-Stage=Embryos 18-20 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4613 4613_SRR034230.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-20-22-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4613.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 20-22 hr Developmental-Stage=Embryos 20-22 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4614 4614_SRR034231.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-22-24-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4614.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 22-24 hr Developmental-Stage=Embryos 22-24 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4615 4615_SRR034221.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-2-4-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4615.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 2-4 hr Developmental-Stage=Embryos 2-4 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4616 4616_SRR034222.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-4-6-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4616.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 4-6 hr Developmental-Stage=Embryos 4-6 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4617 4617_SRR034223.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-6-8-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4617.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 6-8 hr Developmental-Stage=Embryos 6-8 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4618 4618_SRR034224.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-8-10-hr#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4618.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 8-10 hr Developmental-Stage=Embryos 8-10 hr#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4642 4642_SRR100279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4642.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4642 4642_SRR070434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4642:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4642 4642_SRR070435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4642:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4643 4643_SRR116383.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4643:6383.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4643 4643_SRR070420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4643:070420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4643 4643_SRR100274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4643:100274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4643 4643_SRR111882.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4643:1882.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4644 4644_SRR070414.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4644.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4644 4644_SRR070415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4644.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4645 4645_SRR100283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4645.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4645 4645_SRR100277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4645:100277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4645 4645_SRR070431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4645:070431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4646 4646_SRR100280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4646.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4646 4646_SRR070432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4646:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4646 4646_SRR070433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4646:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 1 days Developmental-Stage=Adult Male eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4647 4647_SRR070421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4647.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 20 days Developmental-Stage=Adult Male eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4647 4647_SRR070424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4647.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 20 days Developmental-Stage=Adult Male eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4649 4649_SRR070416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4649.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4649 4649_SRR070400.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4649.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4650 4650_SRR070423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4650:070423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4650 4650_SRR100276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4650:100276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4650 4650_SRR070422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4650:070422.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4650 4650_SRR350960.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4650:350960.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4650 4650_SRR350961.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Male-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4650:350961.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Male eclosion + 4 days Developmental-Stage=Adult Male eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4651 4651_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4651 4651_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4607 4607_SRR034220.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-0-2-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4607.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 0-2 hr after egg laying Developmental-Stage=Embryos 0-2 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4608 4608_SRR034225.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-10-12-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4608.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 10-12 hr after egg laying Developmental-Stage=Embryos 10-12 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4609 4609_SRR034226.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-12-14-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4609.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 12-14 hr after egg laying Developmental-Stage=Embryos 12-14 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4610 4610_SRR034227.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-14-16-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4610.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 14-16 hr after egg laying Developmental-Stage=Embryos 14-16 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4611 4611_SRR034228.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-16-18-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4611.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 16-18 hr after egg laying Developmental-Stage=Embryos 16-18 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4612 4612_SRR034229.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-18-20-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4612.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 18-20 hr after egg laying Developmental-Stage=Embryos 18-20 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4613 4613_SRR034230.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-20-22-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4613.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 20-22 hr after egg laying Developmental-Stage=Embryos 20-22 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4614 4614_SRR034231.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-22-24-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4614.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 22-24 hr after egg laying Developmental-Stage=Embryos 22-24 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4615 4615_SRR034221.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-2-4-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4615.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 2-4 hr after egg laying Developmental-Stage=Embryos 2-4 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4616 4616_SRR034222.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-4-6-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4616.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 4-6 hr after egg laying Developmental-Stage=Embryos 4-6 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4617 4617_SRR034223.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-6-8-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4617.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 6-8 hr after egg laying Developmental-Stage=Embryos 6-8 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4618 4618_SRR034224.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Embryos-8-10-hr-after-egg-laying#Strain=Y-cn-bw-sp:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_4618.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Embryos 8-10 hr after egg laying Developmental-Stage=Embryos 8-10 hr after egg laying#Strain=Y cn bw sp Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4642 4642_SRR100279.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4642.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4642 4642_SRR070434.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4642:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4642 4642_SRR070435.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4642:5.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4643 4643_SRR116383.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4643:6383.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4643 4643_SRR070420.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4643:070420.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4643 4643_SRR100274.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4643:100274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4643 4643_SRR111882.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4643:1882.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4644 4644_SRR070414.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4644.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4644 4644_SRR070415.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4644.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4645 4645_SRR100283.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4645.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4645 4645_SRR100277.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4645:100277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4645 4645_SRR070431.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4645:070431.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4646 4646_SRR100280.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4646.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4646 4646_SRR070432.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4646:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4646 4646_SRR070433.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4646:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4647 4647_SRR070421.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4647.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4647 4647_SRR070424.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4647.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4649 4649_SRR070416.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4649.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4649 4649_SRR070400.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4649.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4650 4650_SRR070423.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4650:070423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4650 4650_SRR100276.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4650:100276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4650 4650_SRR070422.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4650:070422.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4650 4650_SRR350960.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4650:350960.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4650 4650_SRR350961.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4650:350961.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4651 4651_SRR070395.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4651 4651_SRR070399.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4651.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4652 4652_SRR070394.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4652.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4652 4652_SRR070398.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4652.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 1 days Developmental-Stage=Adult eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4653 4653_SRR070391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4653.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4653 4653_SRR070404.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4653.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4653 4653_SRR070391.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4653.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4653 4653_SRR070404.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4653.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4654 4654_SRR070403.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4654.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4654 4654_SRR111883.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4654:111883.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4654 4654_SRR070390.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4654:070390.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 20 days Developmental-Stage=Adult eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4655 4655_SRR070402.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4655.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4655 4655_SRR070387.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4655.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4655 4655_SRR070402.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4655.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4655 4655_SRR070387.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4655.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4656 4656_SRR111878.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4656:111878.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4656 4656_SRR111879.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4656:111879.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4656 4656_SRR070401.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4656.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11146,31 +12120,31 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4657 4657_SRR070412.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4657.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4658 4658_SRR070409.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4658.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4658 4658_SRR070410.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4658.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4659 4659_SRR100269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4659.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4659 4659_SRR070426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4659.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4659 4659_SRR100269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4659.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4659 4659_SRR070426.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Adult-Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4659.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Adult Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4660 4660_SRR070408.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4660.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4660 4660_SRR100268.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4660.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4661 4661_SRR070406.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4661.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4661 4661_SRR070405.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4661.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4663 4663_SRR070425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4663.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4663 4663_SRR070407.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4663.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4664 4664_SRR070437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4664:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4664 4664_SRR100281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4664.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4664 4664_SRR070436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4664:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 1 days Developmental-Stage=Adult Female eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4665 4665_SRR100275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4665:100275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4665 4665_SRR070419.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4665:070419.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4665 4665_SRR070388.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4665.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 20 days Developmental-Stage=Adult Female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4666 4666_SRR100278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4666:100278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4666 4666_SRR070430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4666:070430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4666 4666_SRR100282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-Female-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4666.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult Female eclosion + 4 days Developmental-Stage=Adult Female eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4661 4661_SRR070406.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4661.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4661 4661_SRR070405.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4661.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4663 4663_SRR070425.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4663.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4663 4663_SRR070407.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4663.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4664 4664_SRR070437.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4664:7.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4664 4664_SRR100281.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4664.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4664 4664_SRR070436.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4664:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4665 4665_SRR100275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4665:100275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4665 4665_SRR070419.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4665:070419.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4665 4665_SRR070388.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4665.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4666 4666_SRR100278.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4666:100278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4666 4666_SRR070430.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4666:070430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4666 4666_SRR100282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4666.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4667 4667_SRR070396.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-virgin-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4667.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult virgin ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4667 4667_SRR070417.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Adult-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Adult-virgin-ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4667.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Adult eclosion + 4 days Developmental-Stage=Adult eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Adult virgin ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4668 4668_SRR070413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4668.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4668 4668_SRR070429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4668.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4669 4669_SRR070428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4669.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4669 4669_SRR070411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4669.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4670 4670_SRR100270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4670.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4670 4670_SRR070427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4670.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4668 4668_SRR070413.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4668.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4668 4668_SRR070429.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=Pupae#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4668.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Pupae Developmental-Stage=Pupae#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4669 4669_SRR070428.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4669.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4669 4669_SRR070411.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4669.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4670 4670_SRR100270.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4670.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4670 4670_SRR070427.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4670.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4671 4671_SRR103726.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=10%-EtOH:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4671.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=10% EtOH Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4671 4671_SRR103727.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=10%-EtOH:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4671.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=10% EtOH Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4672 4672_SRR103731.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=2.5%-EtOH:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4672.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=2.5% EtOH Rep-2 Dmel_r5.32 Celniker, S. Gene Structure @@ -11183,16 +12157,16 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4675 4675_SRR124258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=Caffeine-2.5-mg-ml:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4675.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=Caffeine 2.5 mg/ml Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4676 4676_SRR103748.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=Caffeine-Pre-Lethal:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4676.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=Caffeine Pre Lethal Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4676 4676_SRR103747.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=Caffeine-Pre-Lethal:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4676.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=Caffeine Pre Lethal Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4677 4677_SRR103725.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05M--Cdcl2:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4677.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05M Cdcl2 Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4677 4677_SRR124260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05M--Cdcl2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4677.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05M Cdcl2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4677 4677_SRR103725.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05M-CdCl2:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4677.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05M CdCl2 Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4677 4677_SRR124260.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05M-CdCl2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4677.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05M CdCl2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4678 4678_SRR103737.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05-mM-CdCl2-salt:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4678.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05 mM CdCl2 salt Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4678 4678_SRR103736.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05-mM-CdCl2-salt:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4678.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05 mM CdCl2 salt Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4679 4679_SRR103717.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05-mM-CdCl2-salt:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4679:17.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05 mM CdCl2 salt Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4679 4679_SRR103738.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05-mM-CdCl2-salt:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4679:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05 mM CdCl2 salt Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4679 4679_SRR103739.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05-mM-CdCl2-salt:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4679:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05 mM CdCl2 salt Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4679 4679_SRR103716.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.05-mM-CdCl2-salt:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4679:16.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.05 mM CdCl2 salt Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4680 4680_SRR103745.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.1M--Cdcl2:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4680.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.1M Cdcl2 Rep-2 Dmel_r5.32 Celniker, S. Gene Structure -4680 4680_SRR103744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.1M--Cdcl2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4680.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.1M Cdcl2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4680 4680_SRR103745.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.1M-CdCl2:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4680.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.1M CdCl2 Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +4680 4680_SRR103744.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Compound=0.1M-CdCl2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4680.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Compound=0.1M CdCl2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4681 4681_SRR103709.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Temperature=:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4681.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Temperature= Rep-2 Dmel_r5.32 Celniker, S. Gene Structure 4681 4681_SRR103708.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Temperature=:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4681.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Temperature= Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4682 4682_SRR103710.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Temperature=:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4682.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Temperature= Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11238,26 +12212,58 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4692 4692_SRR027188.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4692:027188.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4692 4692_SRR360124.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4692:360124.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4692 4692_DauerDAF2-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4692:2.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure -4717 4717_Fatbody-2.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-2::Dmel_r5.32:modENCODE_4717.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Orr-Weaver_fatbody_1M_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Fatbody-1.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:1.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Fatbody-2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:2.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Fatbody-Combined.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:Combined.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Fatbody-1.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:1.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Orr-Weaver_fatbody_400K_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Orr-Weaver_fatbody_1M_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Orr-Weaver_fatbody_400K_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -4717 4717_Fatbody-Combined.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:Combined.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Midgut-Combined.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:Combined.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Orr-Weaver_252404810019_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Midgut-Combined.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:Combined.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Midgut-2.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-2::Dmel_r5.32:modENCODE_4718.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Orr-Weaver_252404810019_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Orr-Weaver_Midgut_400K_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Midgut-1.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:1.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Midgut-2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:2.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Midgut-1.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:1.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication -4718 4718_Orr-Weaver_Midgut_400K_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=midgut#whole-organism=Tissue:Midgut:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4715 4715_SRR384915.fastq.gz D.melanogaster/Histone-Modification/ChIP-seq/raw-seqfile_fastq H3K36me3:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-8:ChIP:Dmel_r5.32:modENCODE_4715.fastq.gz raw-seqfile_fastq D. melanogaster Histone Modification ChIP-seq H3K36me3 Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-8 Dmel_r5.32 White, K. Histone modification and replacement +4716 4716_SRR384915.fastq.gz D.melanogaster/Non-TF-Chromatin-binding-factor/ChIP-seq/raw-seqfile_fastq Su(Hw):Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:ChIP-seq:Rep-8:ChIP:Dmel_r5.32:modENCODE_4716.fastq.gz raw-seqfile_fastq D. melanogaster Non TF Chromatin binding factor ChIP-seq Su(Hw) Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-8 Dmel_r5.32 White, K. Other chromatin binding sites +4717 4717_Fatbody-2.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-2::Dmel_r5.32:modENCODE_4717.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Orr-Weaver_fatbody_1M_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Fatbody-1.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:1.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Fatbody-2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:2.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Fatbody-Combined.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:Combined.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Fatbody-1.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:1.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Orr-Weaver_fatbody_400K_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Orr-Weaver_fatbody_1M_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Orr-Weaver_fatbody_400K_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_4717.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4717 4717_Fatbody-Combined.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Fat-body#whole-organism=Tissue-fat-body-SC-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4717:Combined.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Fat body#whole-organism=Tissue:fat-body:SC:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Midgut-Combined.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:Combined.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Orr-Weaver_252404810019_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1:Cy3:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Midgut-Combined.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:Combined.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Midgut-2.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-2::Dmel_r5.32:modENCODE_4718.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Orr-Weaver_252404810019_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1:Cy5:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Orr-Weaver_Midgut_400K_635.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-2:Cy5:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Midgut-1.wig.gz D.melanogaster/DNA-Replication/ChIP-chip/normalized-arrayfile_wiggle Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:1.wig.gz normalized-arrayfile_wiggle D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Midgut-2.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:2.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Midgut-1.bed.gff3.gz D.melanogaster/DNA-Replication/ChIP-chip/gene-model_gff3 Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-1::Dmel_r5.32:modENCODE_4718:1.gff3.gz gene-model_gff3 D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-1 Dmel_r5.32 MacAlpine, D. Replication +4718 4718_Orr-Weaver_Midgut_400K_532.txt.gz D.melanogaster/DNA-Replication/ChIP-chip/raw-arrayfile_pair Replication-Origin:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue-Midgut-DM-1:ChIP-chip:Rep-2:Cy3:Dmel_r5.32:modENCODE_4718.pair.gz raw-arrayfile_pair D. melanogaster DNA Replication ChIP-chip Replication-Origin L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon-R#Tissue=Midgut#whole-organism=Tissue:Midgut:DM:1 Rep-2 Dmel_r5.32 MacAlpine, D. Replication +4719 4719_SRR027189.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:027189.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2_DauerEntryDAF2-2_DauerEntryDAF2-1-1_DauerEntryDAF2-4-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:DauerEntryDAF2-2_DauerEntryDAF2-1-1_DauerEntryDAF2-4-1.raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2_DauerEntryDAF2-2_DauerEntryDAF2-1-1_DauerEntryDAF2-4-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:DauerEntryDAF2-2_DauerEntryDAF2-1-1_DauerEntryDAF2-4-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358693.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358693.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:2.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-1-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:1-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358691.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358691.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358694.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358694.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:2.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2_DauerEntryDAF2-2_DauerEntryDAF2-1-1_DauerEntryDAF2-4-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:DauerEntryDAF2-2_DauerEntryDAF2-1-1_DauerEntryDAF2-4-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:2.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-4-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:4-1.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-4-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:4-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR124276.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:124276.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-1-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:1-1.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-1-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:1-1.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-1-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:1-1.raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR027190.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:027190.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-4-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:4-1.raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358690.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358690.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358692.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358692.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:.win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358689.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358689.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:2.raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR358688.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:358688.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_SRR124275.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:124275.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2-4-1.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:4-1.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:.raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4719 4719_DauerEntryDAF2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4719:.raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure 4720 4720_SRR070272.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=1182-4H:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4720.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=1182-4H Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4721 4721_SRR070282.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4721:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=CME-L1 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4721 4721_SRR070288.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4721:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=CME-L1 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11269,9 +12275,9 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4724 4724_SRR070269.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Kc167:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4724:070269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Kc167 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4724 4724_SRR070261.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Kc167:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4724:070261.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Kc167 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4724 4724_SRR111873.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Kc167:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4724:111873.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Kc167 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4725 4725_SRR111869.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4725:111869.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4725 4725_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4725:070258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure -4725 4725_SRR189833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4725:189833.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4725 4725_SRR111869.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4725:111869.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4725 4725_SRR070258.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4725:070258.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4725 4725_SRR189833.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=mbn2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4725:189833.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=mbn2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4726 4726_SRR070275.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD17-c3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4726.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=ML-DmD17-c3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4727 4727_SRR070262.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmBG2-c2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4727:070262.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=ML-DmBG2-c2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4727 4727_SRR111870.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmBG2-c2:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4727:111870.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=ML-DmBG2-c2 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure @@ -11304,6 +12310,56 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4739 4739_SRR070259.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4739:070259.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=S3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4739 4739_SRR111872.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S3:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4739:111872.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=S3 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 4740 4740_SRR070271.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Sg4:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4740.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq transfrag Cell-Line=Sg4 Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +4771 4771_Lai_S3cell_V074.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4771.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4771 4771_SRR488717.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4771:SRR488717.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4771 4771_SRR488719.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4771:SRR488719.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4771 4771_Lai_S3cell_V128.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4771:Lai_S3cell_V128.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4771 4771_SRR384915.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4771:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4771 4771_Lai_S3cell_V128.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4771.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4771 4771_Lai_S3cell_V074.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4771:Lai_S3cell_V074.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4772 4772_MK3_HeatShock_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4772.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4772 4772_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4772:38491.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4772 4772_SRR404125.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4772:40412.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4773 4773_MK5_Hypoxia_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4773.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4773 4773_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4773:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4773 4773_SRR404127.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4773:404127.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4774 4774_MK4_Juglone_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4774.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4774 4774_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4774:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4774 4774_SRR404126.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4774:404126.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4775 4775_SRR404128.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4775:404128.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4775 4775_MK6_Starvation_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4775.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4775 4775_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4775:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4776 4776_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4776:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4776 4776_SRR404130.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4776:404130.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4776 4776_MK8_RecoveryPostHS_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4776.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4777 4777_MK1_Baseline_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4777.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4777 4777_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4777:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4777 4777_SRR404123.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4777:404123.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4778 4778_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4778:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4778 4778_SRR404124.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4778:404124.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4778 4778_MK2_UntreatedCont_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4778.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4779 4779_MK7_RecoveryUntreatedCont_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4779.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4779 4779_SRR404129.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4779:404129.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4779 4779_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_4779:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +4780 4780_Lai_fGS_OSScell_V091.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=fGS-OSS#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4780:Lai_fGS_OSScell_V091.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=fGS/OSS#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4780 4780_Lai_fGS_OSScell_V091.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=fGS-OSS#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4780.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=fGS/OSS#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4780 4780_SRR384915.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=fGS-OSS#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4780:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=fGS/OSS#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4782 4782_Lai_G2cell_V127.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=G2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4782:Lai_G2cell_V127.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=G2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4782 4782_SRR384915.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=G2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4782:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=G2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4782 4782_Lai_G2cell_V127.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=G2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4782.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=G2#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4785 4785_Lai_CME_L1cell_V126.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4785.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4785 4785_SRR384915.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4785:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4785 4785_Lai_CME_L1cell_V126.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4785:Lai_CME_L1cell_V126.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4787 4787_SRR384915.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4787:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4787 4787_Lai_S1cell_V146.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4787.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4787 4787_Lai_S1cell_V146.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4787:Lai_S1cell_V146.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_SRR384915.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4788:SRR384915.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_Lai_OSCcell_M031.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4788:Lai_OSCcell_M031.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_Lai_OSCcell_V144.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4788.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_Lai_OSCcell_V144.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4788:Lai_OSCcell_V144.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_SRR514862.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_4788:SRR514862.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_Lai_OSCcell_M031.sam.gz D.melanogaster/small-RNA/RNA-seq/alignment_sam small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4788.sam.gz alignment_sam D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling +4788 4788_SRR488723.fastq.gz D.melanogaster/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_4788:SRR488723.fastq.gz raw-seqfile_fastq D. melanogaster small RNA RNA-seq small-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-2 Dmel_r5.32 Lai, E. RNA expression profiling 4815 4815_Sample_D_R2.fastq.gz C.elegans/small-RNA/RACE/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_4815:D_R2.fastq.gz raw-seqfile_fastq C. elegans small RNA RACE small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 4815 4815_Sample_A_R2.fastq.gz C.elegans/small-RNA/RACE/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_4815:A_R2.fastq.gz raw-seqfile_fastq C. elegans small RNA RACE small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 4815 4815_Sample_C_R1.fastq.gz C.elegans/small-RNA/RACE/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_4815:C_R1.fastq.gz raw-seqfile_fastq C. elegans small RNA RACE small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling @@ -11320,6 +12376,208 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 4815 4815_Sample_D_R1.fastq.gz C.elegans/small-RNA/RACE/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_4815:D_R1.fastq.gz raw-seqfile_fastq C. elegans small RNA RACE small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 4815 4815_Sample_F_R1.fastq.gz C.elegans/small-RNA/RACE/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_4815:F_R1.fastq.gz raw-seqfile_fastq C. elegans small RNA RACE small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling 4815 4815_Sample_E_R2.fastq.gz C.elegans/small-RNA/RACE/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-Population-Worms#Strain=N2#temperature=25-degree-celsius:RACE:Rep-1::Cele_WS220:modENCODE_4815:E_R2.fastq.gz raw-seqfile_fastq C. elegans small RNA RACE small-RNA Mixed Population Worms Developmental-Stage=Mixed Population Worms#Strain=N2#temperature=25 degree celsius Rep-1 Cele_WS220 Piano, F. RNA expression profiling +5268 5268_SRR384958.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5268 5268_SRR384918.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5268.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5269 5269_SRR384937.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5269 5269_SRR384938.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5269.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5270 5270_SRR384922.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5270 5270_SRR384923.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Female-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5270.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated female eclosion + 20 days Developmental-Stage=Adult mated female eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5271 5271_SRR384928.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5271.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5271 5271_SRR384962.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-mated-female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Mated-Adult-Ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5271.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult mated Female, eclosion + 4 days Developmental-Stage=Adult mated female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Mated Adult Ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5272 5272_SRR384919.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5272 5272_SRR384959.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5272.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5273 5273_SRR384939.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5273 5273_SRR384905.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5273.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5274 5274_SRR384931.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5274 5274_SRR384907.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-accessory-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5274.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5275 5275_SRR384925.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5275 5275_SRR384924.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Male-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5275.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5276 5276_SRR384930.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5276 5276_SRR384929.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Male,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Testes:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5276.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Male, eclosion + 4 days Developmental-Stage=Adult Male, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5277 5277_SRR384921.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5277 5277_SRR384909.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5277.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5278 5278_SRR384906.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5278 5278_SRR384920.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5278.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5279 5279_SRR384942.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5279 5279_SRR384910.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5279.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5280 5280_SRR384940.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5280.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5280 5280_SRR384941.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5280.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5281 5281_SRR384908.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5281.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5281 5281_SRR384934.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5281.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5282 5282_SRR384932.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5282.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5282 5282_SRR384933.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5282.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5283 5283_SRR384956.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5283.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5283 5283_SRR384955.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5283.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5284 5284_SRR384951.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5284.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5284 5284_SRR384913.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Oregon-R-modENCODE#Tissue=Central-nervous-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5284.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Oregon R-modENCODE#Tissue=Central nervous system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5285 5285_SRR384950.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5285.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5285 5285_SRR384949.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Carcass:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5285.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5286 5286_SRR384912.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5286 5286_SRR384948.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult,-eclosion-+-20-days#Strain=Oregon-R-modENCODE#Tissue=Digestive-system:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5286.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult, eclosion + 20 days Developmental-Stage=Adult, eclosion + 20 days#Strain=Oregon R-modENCODE#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5287 5287_SRR384943.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5287 5287_SRR384944.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5287.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5288 5288_SRR384945.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5288.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5288 5288_SRR384911.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=L3-stage-wandering-stage-larvae#Strain=Oregon-R-modENCODE#Tissue=Imaginal-discs:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5288.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA L3 stage wandering stage larvae Developmental-Stage=L3 stage wandering stage larvae#Strain=Oregon R-modENCODE#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5289 5289_SRR384947.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5289.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5289 5289_SRR384946.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5289.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5290 5290_SRR384917.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5290 5290_SRR384960.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5290.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5291 5291_SRR384936.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5291.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5291 5291_SRR384935.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5291.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5292 5292_SRR384916.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5292.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5292 5292_SRR384961.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Female-virgin-heads:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5292.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Female virgin heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5293 5293_SRR384927.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Virgin-adult-ovaries:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5293.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Virgin adult ovaries Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5293 5293_SRR384926.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Adult-Female,-eclosion-+-4-days#Strain=Oregon-R-modENCODE#Tissue=Virgin-adult-ovaries:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5293.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Female, eclosion + 4 days Developmental-Stage=Adult Female, eclosion + 4 days#Strain=Oregon R-modENCODE#Tissue=Virgin adult ovaries Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5294 5294_SRR384957.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5294.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5294 5294_SRR384915.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5294.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5295 5295_SRR384914.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5295.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5295 5295_SRR384954.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Fat-body:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5295.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5296 5296_SRR384952.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5296.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5296 5296_SRR384953.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=White-prepupae-(WPP)#Strain=Oregon-R-modENCODE#Tissue=Salivary-glands:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5296.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Oregon R-modENCODE#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5297 5297_AdMateF_1d_head.B81CG2ABXX_lane1.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5297.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5297 5297_SRR384958.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5297:58.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5297 5297_AdMateF_1d_head.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5297.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5297 5297_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5297:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5297 5297_SRR384918.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5297.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 1 days Developmental-Stage=Mated female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5298 5298_SRR384938.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5298:38.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5298 5298_AdMateF_20d_head.B81CG2ABXX_lane2a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5298.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5298 5298_SRR384937.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5298.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5298 5298_AdMateF_20d_head.B81CG2ABXX_lane2b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5298.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5298 5298_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5298:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 20 days Developmental-Stage=Mated female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5299 5299_SRR384923.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5299:23.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5299 5299_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5299:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5299 5299_SRR384922.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5299.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5299 5299_AdMateF_4d_head.B81CG2ABXX_lane1a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5299.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5299 5299_AdMateF_4d_head.B81CG2ABXX_lane1b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5299.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5300 5300_SRR384928.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5300.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5300 5300_AdMateF_4d_ovaries.B81CG2ABXX_lane1.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5300.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5300 5300_SRR384962.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5300:62.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5300 5300_AdMateF_4d_ovaries.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5300.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5300 5300_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5300:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated female, eclosion + 4 days Developmental-Stage=Mated female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5301 5301_AdMateM_1d_head.B81CG2ABXX_lane1.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5301.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5301 5301_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5301:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5301 5301_SRR384919.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5301.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5301 5301_AdMateM_1d_head.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5301.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5301 5301_SRR384959.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5301:59.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 1 days Developmental-Stage=Mated male, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5302 5302_AdMateM_20d_head.B81CG2ABXX_lane2.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5302.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5302 5302_SRR384905.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5302.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5302 5302_SRR384939.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5302:39.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5302 5302_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5302:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5302 5302_AdMateM_20d_head.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5302.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 20 days Developmental-Stage=Mated male, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5303 5303_SRR384907.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Accessory-glands:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5303.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5303 5303_AdMateM_4d_acc_gland.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Accessory-glands:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5303.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Accessory glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5303 5303_SRR384931.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Accessory-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5303:31.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5303 5303_AdMateM_4d_acc_gland.B81CG2ABXX_lane2.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Accessory-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5303.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5303 5303_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Accessory-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5303:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Accessory glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5304 5304_SRR384924.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5304.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5304 5304_SRR384925.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5304:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5304 5304_AdMateM_4d_head.B81CG2ABXX_lane1b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5304.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5304 5304_AdMateM_4d_head.B81CG2ABXX_lane1a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5304.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5304 5304_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Mated-Male-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5304:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Mated Male heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5305 5305_SRR384930.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Testes:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5305:30.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5305 5305_AdMateM_4d_testes.B81CG2ABXX_lane2a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Testes:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5305.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5305 5305_SRR384929.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Testes:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5305.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Testes Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5305 5305_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Testes:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5305:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5305 5305_AdMateM_4d_testes.B81CG2ABXX_lane2b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mated-male,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Testes:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5305.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mated male, eclosion + 4 days Developmental-Stage=Mated male, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Testes Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5306 5306_MixMF_1d_Carcass.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5306.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5306 5306_MixMF_1d_Carcass.B81CG2ABXX_lane1.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5306.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5306 5306_SRR384921.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5306:21.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5306 5306_SRR384909.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5306.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5306 5306_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5306:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5307 5307_MixMF_1d_dig_sys.B81CG2ABXX_lane1.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5307.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5307 5307_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5307:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5307 5307_SRR384920.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5307:20.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5307 5307_SRR384906.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-day#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5307.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 day#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5307 5307_MixMF_1d_dig_sys.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5307.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed males and females eclosion + 1 days Developmental-Stage=Mixed males and females eclosion + 1 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5308 5308_MixMF_20d_Carcass.B81CG2ABXX_lane3.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5308.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5308 5308_SRR384910.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5308.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5308 5308_SRR384942.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5308:42.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5308 5308_MixMF_20d_Carcass.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5308.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5308 5308_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5308:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5309 5309_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5309:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5309 5309_MixMF_20d_dig_sys.B81CG2ABXX_lane2.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5309.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5309 5309_SRR384941.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5309:41.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5309 5309_MixMF_20d_dig_sys.B81CG2ABXX_lane3.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5309.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5309 5309_SRR384940.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5309.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 20 days Developmental-Stage=Mixed males and females eclosion + 20 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5310 5310_MixMF_4d_Carcass.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5310.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5310 5310_SRR384908.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5310.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5310 5310_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5310:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5310 5310_SRR384934.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5310:34.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5310 5310_MixMF_4d_Carcass.B81CG2ABXX_lane2.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5310.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5311 5311_SRR384933.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5311:33.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5311 5311_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5311:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5311 5311_MixMF_4d_dig_sys.B81CG2ABXX_lane2a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5311.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5311 5311_MixMF_4d_dig_sys.B81CG2ABXX_lane2b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5311.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5311 5311_SRR384932.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Mixed-males-and-females-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5311.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Mixed Males and Females eclosion + 4 days Developmental-Stage=Mixed males and females eclosion + 4 days#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5312 5312_Pup_WPP_2d_CNS.B81CG2ABXX_lane4a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5312.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=CNS Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5312 5312_Pup_WPP_2d_CNS.B81CG2ABXX_lane4b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5312.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=CNS Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5312 5312_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5312:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=CNS Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5312 5312_SRR384955.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5312.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=CNS Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5312 5312_SRR384956.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5312:56.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=CNS Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5313 5313_L3_CNS.B81CG2ABXX_lane3.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5313.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Y cn bw sp#Tissue=CNS Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5313 5313_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5313:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Y cn bw sp#Tissue=CNS Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5313 5313_SRR384951.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5313:51.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Y cn bw sp#Tissue=CNS Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5313 5313_L3_CNS.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5313.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Y cn bw sp#Tissue=CNS Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5313 5313_SRR384913.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Late-third-instar-larvae#Strain=Y-cn-bw-sp#Tissue=CNS:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5313.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late third instar larvae Developmental-Stage=Late third instar larvae#Strain=Y cn bw sp#Tissue=CNS Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5314 5314_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5314:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5314 5314_SRR384949.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5314.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5314 5314_L3_Wand_carcas.B81CG2ABXX_lane3b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5314.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5314 5314_SRR384950.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5314:50.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Carcass Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5314 5314_L3_Wand_carcas.B81CG2ABXX_lane3a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Carcass:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5314.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Carcass Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5315 5315_SRR384912.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5315.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5315 5315_L3_Wand_dig_sys.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5315.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Digestive system Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5315 5315_L3_Wand_dig_sys.B81CG2ABXX_lane3.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5315.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5315 5315_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5315:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5315 5315_SRR384948.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Digestive-system:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5315:48.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Digestive system Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5316 5316_L3_Wand_fat.B81CG2ABXX_lane3b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5316.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5316 5316_SRR384943.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5316.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5316 5316_SRR384944.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5316:44.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5316 5316_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5316:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5316 5316_L3_Wand_fat.B81CG2ABXX_lane3a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5316.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5317 5317_L3_Wand_imag_disc.B81CG2ABXX_lane3.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Imaginal-discs:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5317.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5317 5317_SRR384945.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Imaginal-discs:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5317:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5317 5317_L3_Wand_imag_disc.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Imaginal-discs:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5317.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5317 5317_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Imaginal-discs:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5317:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Imaginal discs Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5317 5317_SRR384911.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Imaginal-discs:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5317.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Imaginal discs Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5318 5318_SRR384947.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5318:47.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5318 5318_L3_Wand_saliv.B81CG2ABXX_lane3a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5318.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5318 5318_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5318:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5318 5318_L3_Wand_saliv.B81CG2ABXX_lane3b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5318.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5318 5318_SRR384946.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Larvae-third-instar-wandering-stage#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5318.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Larvae third instar wandering stage Developmental-Stage=Larvae third instar wandering stage#Strain=Y cn bw sp#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5319 5319_SRR384917.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5319.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Virgin Female Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5319 5319_SRR384960.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5319:60.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Virgin Female Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5319 5319_AdVirF_1d_head.B81CG2ABXX_lane1.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5319.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Virgin Female Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5319 5319_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5319:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Virgin Female Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5319 5319_AdVirF_1d_head.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-1-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5319.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 1 days Developmental-Stage=Virgin female, eclosion + 1 days#Strain=Y cn bw sp#Tissue=Virgin Female Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5320 5320_SRR384936.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5320:36.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5320 5320_AdVirF_20d_head.B81CG2ABXX_lane2b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5320.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5320 5320_SRR384935.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5320.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5320 5320_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5320:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5320 5320_AdVirF_20d_head.B81CG2ABXX_lane2a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-20-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5320.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 20 days Developmental-Stage=Virgin female, eclosion + 20 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5321 5321_AdVirF_4d_head.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5321.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5321 5321_SRR384916.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5321.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5321 5321_AdVirF_4d_head.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5321.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5321 5321_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5321:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5321 5321_SRR384961.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Virgin-Female-heads:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5321:61.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Virgin Female heads Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5322 5322_AdVirF_4d_ovaries.B81CG2ABXX_lane1b.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5322.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5322 5322_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5322:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5322 5322_SRR384927.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5322:27.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5322 5322_SRR384926.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5322.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5322 5322_AdVirF_4d_ovaries.B81CG2ABXX_lane1a.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=Virgin-female,-eclosion-+-4-days#Strain=Y-cn-bw-sp#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5322.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag Virgin female, eclosion + 4 days Developmental-Stage=Virgin female, eclosion + 4 days#Strain=Y cn bw sp#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5323 5323_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=Fat:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5323:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=Fat Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5323 5323_SRR384957.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=Fat:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5323:57.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=Fat Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5323 5323_WPP_2d_fat.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=Fat:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5323.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=Fat Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5323 5323_WPP_2d_fat.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)-+-2-days#Strain=Y-cn-bw-sp#Tissue=Fat:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5323.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) + 2 days Developmental-Stage=White prepupae (WPP) + 2 days#Strain=Y cn bw sp#Tissue=Fat Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5324 5324_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5324:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5324 5324_WPP_fat.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5324.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5324 5324_WPP_fat.62GMCAAXX_lane8.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5324.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5324 5324_SRR384914.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5324.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Fat body Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5324 5324_SRR384954.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Fat-body:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5324:54.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Fat body Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5325 5325_WPP_saliv.B81CG2ABXX_lane3.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5325.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5325 5325_SRR384953.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5325:53.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5325 5325_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5325:15.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5325 5325_WPP_saliv.B81CG2ABXX_lane4.Poly_A.out.bowtie.unique.out.sam.gz D.melanogaster/mRNA/integrated-gene-model/alignment_sam transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-2::Dmel_r5.32:modENCODE_5325.sam.gz alignment_sam D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Salivary glands Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5325 5325_SRR384952.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Developmental-Stage=White-prepupae-(WPP)#Strain=Y-cn-bw-sp#Tissue=Salivary-glands:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5325.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag White prepupae (WPP) Developmental-Stage=White prepupae (WPP)#Strain=Y cn bw sp#Tissue=Salivary glands Rep-1 Dmel_r5.32 Celniker, S. Gene Structure 5326 5326_NimbHX_SOH52_80g_vs_SOH52_MT_365604_635.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Developmental-Stage=Mixed-Embryos#Strain=JJ2061:DNA-tiling-array:Rep-1:Cy5-dye:Cele_WS220:modENCODE_5326:2_80g_vs_SOH52_MT_365604_635.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=JJ2061 Rep-1 Cele_WS220 Henikoff, S. Chromatin structure 5326 5326_NimbHX_SOH53_80g_vs_SOH53_MT_365607_635.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Developmental-Stage=Mixed-Embryos#Strain=JJ2061:DNA-tiling-array:Rep-1:Cy5-dye:Cele_WS220:modENCODE_5326:3_80g_vs_SOH53_MT_365607_635.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=JJ2061 Rep-1 Cele_WS220 Henikoff, S. Chromatin structure 5326 5326_NimbHX_SOH53_80g_vs_SOH53_MT_365607_532.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Developmental-Stage=Mixed-Embryos#Strain=JJ2061:DNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_5326:3_80g_vs_SOH53_MT_365607.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=JJ2061 Rep-1 Cele_WS220 Henikoff, S. Chromatin structure @@ -11329,3 +12587,513 @@ DCC id Original Name Directory Uniform filename File Format Organism Target Tech 5326 5326_NimbHX_SOH59_80g_vs_SOH59_MT_365680-2_532.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Developmental-Stage=Mixed-Embryos#Strain=JJ2061:DNA-tiling-array:Rep-1:Cy5-dye:Cele_WS220:modENCODE_5326:9_80g_vs_SOH59_MT_365680-2_532.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=JJ2061 Rep-1 Cele_WS220 Henikoff, S. Chromatin structure 5326 5326_NimbHX_SOH59_80g_vs_SOH59_MT_365680-2_635.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Developmental-Stage=Mixed-Embryos#Strain=JJ2061:DNA-tiling-array:Rep-1:Cy5-dye:Cele_WS220:modENCODE_5326:9_80g_vs_SOH59_MT_365680-2_635.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=JJ2061 Rep-1 Cele_WS220 Henikoff, S. Chromatin structure 5326 5326_NimbHX_SOH52_80g_vs_SOH52_MT_365604_532.pair.gz C.elegans/Chromatin-Structure/DNA-tiling-array/raw-arrayfile_pair HIS-72:Developmental-Stage=Mixed-Embryos#Strain=JJ2061:DNA-tiling-array:Rep-1:Cy3-dye:Cele_WS220:modENCODE_5326:2_80g_vs_SOH52_MT_365604.pair.gz raw-arrayfile_pair C. elegans Chromatin Structure DNA-tiling-array HIS-72 Mixed Embryos Developmental-Stage=Mixed Embryos#Strain=JJ2061 Rep-1 Cele_WS220 Henikoff, S. Chromatin structure +5374 5374_Egg_s_3.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5374.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5374 5374_SRR014966.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5374:014966.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5374 5374_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5374:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5374 5374_Embryo_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5374.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5375 5375_mL1_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5375.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5375 5375_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5375:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5375 5375_L1_s_5.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5375.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5375 5375_SRR014967.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5375:014967.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5376 5376_mL2_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5376.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5376 5376_L2_s_6.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5376.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5376 5376_SRR014968.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5376:014968.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5376 5376_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5376:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5377 5377_SRR014969.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5377:014969.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5377 5377_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5377:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5377 5377_L3_s_7.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5377.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5377 5377_mL3_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5377.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5378 5378_mL4_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5378.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5378 5378_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5378:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5378 5378_SRR014970.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5378:014970.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5378 5378_L4_s_8.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5378.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5379 5379_Adult_s_1.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5379.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5379 5379_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5379:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5379 5379_SRR014971.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5379:014971.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5379 5379_yAdult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5379.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +5380 5380_Male_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5380.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +5380 5380_yMale_dpyhim_s_6.S-3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5380.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +5380 5380_SRR014972.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5380:014972.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +5380 5380_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5380:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_Day0rep_young_adult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:rep.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_spe9day0_rep_s_6.S3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:rep_s_6.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_SRR032279.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:032279.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_Day0_young_adult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_spe9day0_s_1.S3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:s_1.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5381 5381_SRR032283.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5381:032283.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5382 5382_SRR032280.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5382:032280.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5382 5382_Day5_young_adult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5382.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5382 5382_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5382:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5382 5382_spe9day5_s_2.S3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5382.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_SRR032281.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:032281.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_SRR032284.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:032284.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_Day8rep_young_adult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:rep.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_Day8_young_adult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_spe9day8_s_3.S3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:s_3.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5383 5383_spe9day8_rep_s_7.S3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5383:rep_s_7.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5384 5384_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5384:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5384 5384_Day12_young_adult_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5384.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5384 5384_SRR032282.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5384:032282.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5384 5384_spe9day12_s_5.S3.soap.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5384.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5385 5385_Control_Day1_wt_FC42B89HM_s_1_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5385.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5385 5385_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5385:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5385 5385_Day1_Cont_WT_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5385.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5385 5385_SRR077254.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5385:077254.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5386 5386_HeatShock_WT_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5386.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5386 5386_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5386:38491.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5386 5386_SRR077255.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5386:07725.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5386 5386_Heatshock_Day1_wt_FC42B89HM_s_2_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5386.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5387 5387_PA14_WT_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5387.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5387 5387_SRR077256.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5387:077256.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5387 5387_PA14_Day1_wt_FC42B89HM_s_5_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5387.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5387 5387_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5387:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5388 5388_SRR077257.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5388:077257.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5388 5388_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5388:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5388 5388_L1_arrest_FC42B89HM_s_4_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5388.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5388 5388_L1_arrest_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5388.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5389 5389_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5389:38491.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5389 5389_Heat_shock_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5389.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5389 5389_MK3_HeatShock_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5389.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5389 5389_SRR404125.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5389:40412.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5390 5390_MK5_Hypoxia_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5390.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5390 5390_SRR404127.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5390:404127.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5390 5390_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5390:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5390 5390_Hypoxia_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5390.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5391 5391_MK4_Juglone_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5391.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5391 5391_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5391:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5391 5391_SRR404126.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5391:404126.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5391 5391_Oxidation_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5391.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5392 5392_Adult_starvation_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5392.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5392 5392_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5392:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5392 5392_MK6_Starvation_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5392.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5392 5392_SRR404128.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5392:404128.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5393 5393_Heat_shock_recovery_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5393.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5393 5393_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5393:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5393 5393_SRR404130.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5393:404130.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5393 5393_MK8_RecoveryPostHS_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5393.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5394 5394_Baseline_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5394.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5394 5394_MK1_Baseline_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5394.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5394 5394_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5394:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5394 5394_SRR404123.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5394:404123.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5395 5395_Untreated_control_6hrs_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5395.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5395 5395_SRR404124.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5395:404124.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5395 5395_MK2_UntreatedCont_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5395.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5395 5395_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5395:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5396 5396_Untreated_control_12hrs_spe-9_miRNAs_miRBase18.gff3.gz C.elegans/small-RNA/integrated-gene-model/gene-model_gff3 small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5396.gff3.gz gene-model_gff3 C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5396 5396_SRR404129.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5396:404129.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5396 5396_MK7_RecoveryUntreatedCont_qseq.fastq_c_elegans.genomic.fa_SOAP_S3.soapout.sam.gz C.elegans/small-RNA/integrated-gene-model/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5396.sam.gz alignment_sam C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5396 5396_SRR384915.fastq.gz C.elegans/small-RNA/integrated-gene-model/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:integrated-gene-model:Rep-1::Cele_WS220:modENCODE_5396:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA integrated-gene-model small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +5397 5397_SRR494015.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10128#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10128#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5397 5397_SRR494014.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10128#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5397.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10128#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5398 5398_SRR494017.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5398.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5398 5398_SRR494016.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5398.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5399 5399_SRR494018.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10279#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5399.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10279#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5399 5399_SRR494019.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10279#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5399.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10279#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5400 5400_SRR494020.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10851#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5400.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10851#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5400 5400_SRR494021.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG10851#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5400.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG10851#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5401 5401_SRR494023.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG12357#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5401.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG12357#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5401 5401_SRR494022.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG12357#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5401.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG12357#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5402 5402_SRR494025.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG12749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5402.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG12749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5402 5402_SRR494024.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG12749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5402.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG12749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5403 5403_SRR494027.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG1559#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5403.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG1559#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5403 5403_SRR494026.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG1559#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5403.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG1559#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5405 5405_SRR494030.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5405.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5405 5405_SRR494028.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5405.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5405 5405_SRR494029.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-3:input:Dmel_r5.32:modENCODE_5405.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5406 5406_SRR494032.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5406.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5406 5406_SRR494033.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5406.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5406 5406_SRR494031.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-3:input:Dmel_r5.32:modENCODE_5406.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5407 5407_SRR494035.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16901#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5407.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16901#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5407 5407_SRR494034.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG16901#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5407.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG16901#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5408 5408_SRR494036.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG17136#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5408.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG17136#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5408 5408_SRR494037.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG17136#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5408.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG17136#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5409 5409_SRR494039.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG17838#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5409.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG17838#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5409 5409_SRR494038.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG17838#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5409.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG17838#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5410 5410_SRR494041.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG31716#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5410.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG31716#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5410 5410_SRR494040.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG31716#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5410.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG31716#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5412 5412_SRR494042.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG3613#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5412.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG3613#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5412 5412_SRR494043.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG3613#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5412.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG3613#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5413 5413_SRR494044.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG4262#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5413.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG4262#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5413 5413_SRR494045.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG4262#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5413.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG4262#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5414 5414_SRR494046.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-3:input:Dmel_r5.32:modENCODE_5414.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5414 5414_SRR494048.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5414.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5414 5414_SRR494047.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5414.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5415 5415_SRR494049.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG4602#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5415.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG4602#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5415 5415_SRR494050.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG4602#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5415.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG4602#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5416 5416_SRR494051.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG4816#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5416.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG4816#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5416 5416_SRR494052.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG4816#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5416.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG4816#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5417 5417_SRR494053.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG5099#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5417.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG5099#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5417 5417_SRR494054.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG5099#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5417.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG5099#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5418 5418_SRR494056.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG5442#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG5442#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5418 5418_SRR494055.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG5442#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5418.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG5442#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5421 5421_SRR494058.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-3:input:Dmel_r5.32:modENCODE_5421.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5421 5421_SRR494057.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5421.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5421 5421_SRR494059.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5421.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5422 5422_SRR494061.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6227#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5422.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6227#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5422 5422_SRR494060.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6227#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5422.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6227#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5423 5423_SRR494064.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5423 5423_SRR494062.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5423 5423_SRR494063.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-3:input:Dmel_r5.32:modENCODE_5423.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5424 5424_SRR494066.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6841#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5424.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6841#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5424 5424_SRR494065.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6841#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5424.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6841#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5425 5425_SRR494068.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6987#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5425.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6987#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5425 5425_SRR494067.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG6987#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5425.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG6987#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5426 5426_SRR494069.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG7437#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5426.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG7437#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5426 5426_SRR494070.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG7437#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5426.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG7437#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5427 5427_SRR494071.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG8636#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5427.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG8636#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5427 5427_SRR494072.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG8636#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5427.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG8636#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5428 5428_SRR494073.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG8749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5428.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG8749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5428 5428_SRR494074.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG8749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5428.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG8749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5429 5429_SRR494076.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG9998#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5429.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG9998#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5429 5429_SRR494075.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-CG9998#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5429.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-CG9998#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5430 5430_SRR494081.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-4:input:Dmel_r5.32:modENCODE_5430:1.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-4 Dmel_r5.32 Celniker, S. Gene Structure +5430 5430_SRR494083.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-4:input:Dmel_r5.32:modENCODE_5430:3.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-4 Dmel_r5.32 Celniker, S. Gene Structure +5430 5430_SRR494078.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-3:input:Dmel_r5.32:modENCODE_5430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5430 5430_SRR494077.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-2:input:Dmel_r5.32:modENCODE_5430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5430 5430_SRR494079.fastq.gz D.melanogaster/mRNA/RIP-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RIP-seq:Rep-1:input:Dmel_r5.32:modENCODE_5430.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RIP-seq total-RNA Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5438 5438_SRR494014.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10128#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5438.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10128#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5438 5438_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10128#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5438:3849.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10128#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5438 5438_SRR494015.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10128#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5438:4940.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10128#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5439 5439_SRR494016.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5439.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5439 5439_SRR494017.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5439:494017.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5439 5439_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5439:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5440 5440_SRR494018.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10279#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5440.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10279#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5440 5440_SRR494019.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10279#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5440:494019.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10279#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5440 5440_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10279#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5440:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10279#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5441 5441_SRR494021.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10851#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5441:494021.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10851#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5441 5441_SRR494020.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10851#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5441.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10851#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5441 5441_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG10851#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5441:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG10851#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5442 5442_SRR494023.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG12357#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5442:494023.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG12357#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5442 5442_SRR494022.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG12357#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5442.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG12357#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5442 5442_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG12357#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5442:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG12357#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5443 5443_SRR494024.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG12749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5443.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG12749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5443 5443_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG12749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5443:38491.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG12749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5443 5443_SRR494025.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG12749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5443:49402.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG12749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5444 5444_SRR494027.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG1559#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5444:494027.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG1559#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5444 5444_SRR494026.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG1559#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5444.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG1559#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5444 5444_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG1559#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5444:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG1559#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5446 5446_SRR494030.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5446:494030.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5446 5446_SRR494028.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5446.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5446 5446_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5446:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5446 5446_SRR494029.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16725#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5446.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16725#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5447 5447_SRR494033.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5447:494033.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5447 5447_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5447:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5447 5447_SRR494031.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5447.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5447 5447_SRR494032.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16788#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5447.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16788#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5448 5448_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16901#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5448:38491.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16901#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5448 5448_SRR494034.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16901#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5448.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16901#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5448 5448_SRR494035.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG16901#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5448:49403.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG16901#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5449 5449_SRR494036.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG17136#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5449.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG17136#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5449 5449_SRR494037.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG17136#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5449:494037.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG17136#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5449 5449_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG17136#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5449:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG17136#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5450 5450_SRR494039.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG17838#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5450:494039.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG17838#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5450 5450_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG17838#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5450:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG17838#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5450 5450_SRR494038.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG17838#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5450.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG17838#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5451 5451_SRR494041.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG31716#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5451:494041.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG31716#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5451 5451_SRR494040.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG31716#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5451.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG31716#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5451 5451_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG31716#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5451:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG31716#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5453 5453_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG3613#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5453:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG3613#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5453 5453_SRR494043.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG3613#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5453:494043.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG3613#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5453 5453_SRR494042.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG3613#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5453.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG3613#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5454 5454_SRR494045.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4262#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5454:49404.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4262#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5454 5454_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4262#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5454:38491.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4262#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5454 5454_SRR494044.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4262#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5454.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4262#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5455 5455_SRR494046.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5455.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5455 5455_SRR494048.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5455:494048.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5455 5455_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5455:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5455 5455_SRR494047.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG42670#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5455.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG42670#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5456 5456_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4602#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5456:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4602#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5456 5456_SRR494050.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4602#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5456:494050.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4602#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5456 5456_SRR494049.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4602#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5456.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4602#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5457 5457_SRR494051.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4816#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5457.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4816#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5457 5457_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4816#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5457:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4816#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5457 5457_SRR494052.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG4816#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5457:494052.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG4816#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5458 5458_SRR494053.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG5099#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5458.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG5099#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5458 5458_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG5099#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5458:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG5099#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5458 5458_SRR494054.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG5099#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5458:494054.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG5099#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5459 5459_SRR494055.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG5442#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5459.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG5442#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5459 5459_SRR494056.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG5442#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5459:494056.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG5442#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5459 5459_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG5442#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5459:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG5442#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5462 5462_SRR494058.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5462.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5462 5462_SRR494057.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5462.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5462 5462_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5462:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5462 5462_SRR494059.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6203#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5462:494059.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6203#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5463 5463_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6227#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5463:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6227#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5463 5463_SRR494060.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6227#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5463.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6227#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5463 5463_SRR494061.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6227#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5463:494061.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6227#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5464 5464_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5464:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5464 5464_SRR494062.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5464.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5464 5464_SRR494064.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5464:494064.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5464 5464_SRR494063.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6779#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5464.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6779#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5465 5465_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6841#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5465:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6841#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5465 5465_SRR494066.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6841#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5465:494066.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6841#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5465 5465_SRR494065.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6841#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5465.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6841#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5466 5466_SRR494067.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6987#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5466.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6987#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5466 5466_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6987#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5466:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6987#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5466 5466_SRR494068.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG6987#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5466:494068.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG6987#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5467 5467_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG7437#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5467:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG7437#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5467 5467_SRR494070.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG7437#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5467:494070.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG7437#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5467 5467_SRR494069.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG7437#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5467.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG7437#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5468 5468_SRR494072.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG8636#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5468:494072.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG8636#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5468 5468_SRR494071.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG8636#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5468.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG8636#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5468 5468_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG8636#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5468:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG8636#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5469 5469_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG8749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5469:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG8749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5469 5469_SRR494074.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG8749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5469:494074.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG8749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5469 5469_SRR494073.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG8749#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5469.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG8749#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5470 5470_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG9998#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5470:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG9998#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5470 5470_SRR494076.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG9998#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5470:494076.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG9998#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5470 5470_SRR494075.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-CG9998#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5470.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-CG9998#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5471 5471_SRR494077.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-1:input:Dmel_r5.32:modENCODE_5471.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5471 5471_SRR494078.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-2:input:Dmel_r5.32:modENCODE_5471.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5471 5471_SRR494083.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-4:input:Dmel_r5.32:modENCODE_5471:494083.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-4 Dmel_r5.32 Celniker, S. Gene Structure +5471 5471_SRR494081.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-4:input:Dmel_r5.32:modENCODE_5471:494081.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-4 Dmel_r5.32 Celniker, S. Gene Structure +5471 5471_SRR494079.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-3:input:Dmel_r5.32:modENCODE_5471.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-3 Dmel_r5.32 Celniker, S. Gene Structure +5471 5471_SRR384915.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=S2R+-pMK33-C-FLAG-HA-Empty-Vector#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:integrated-gene-model:Rep-4:input:Dmel_r5.32:modENCODE_5471:384915.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Late Embryos Cell-Line=S2R+-pMK33-C-FLAG-HA Empty Vector#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-4 Dmel_r5.32 Celniker, S. Gene Structure +5479 5479_BS389_AB0148ABXX_8_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5479:BS389_AB0148ABXX_8_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5479 5479_BS389_AB0148ABXX_8_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5479:BS389_AB0148ABXX_8_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5479 5479_SRR497717.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=1182-4H#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5479:SRR497717.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=1182-4H#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5480 5480_SRR497726.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5480:SRR497726.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5480 5480_BS371_62W20AAXX_1_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5480:BS371_62W20AAXX_1_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5480 5480_BS371_62W20AAXX_1_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5480:BS371_62W20AAXX_1_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5482 5482_SRR497715.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5482:SRR497715.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5482 5482_BS379_638G8AAXX_2_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5482:BS379_638G8AAXX_2_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5482 5482_BS379_AC01WMACXX_3_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5482:BS379_AC01WMACXX_3_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5482 5482_BS379_AC01WMACXX_3_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5482:BS379_AC01WMACXX_3_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5482 5482_SRR497710.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5482:SRR497710.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5482 5482_BS379_638G8AAXX_2_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5482:BS379_638G8AAXX_2_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD16-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5483 5483_SRR497725.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5483:SRR497725.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5483 5483_BS387_AB0148ABXX_6_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5483:BS387_AB0148ABXX_6_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5483 5483_BS387_AB0148ABXX_6_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5483:BS387_AB0148ABXX_6_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD17-c3#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5484 5484_BS382_62457AAXX_5_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5484:BS382_62457AAXX_5_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5484 5484_SRR497724.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5484:SRR497724.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5484 5484_BS382_62457AAXX_5_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5484:BS382_62457AAXX_5_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c2#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5486 5486_SRR497716.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5486:SRR497716.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5486 5486_BS384_62457AAXX_7_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5486:BS384_62457AAXX_7_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5486 5486_BS384_62457AAXX_7_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae-3rd-instar#Tissue=Imaginal-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5486:BS384_62457AAXX_7_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD4-c1#Developmental-Stage=Larvae 3rd instar#Tissue=Imaginal disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5487 5487_BS381_62457AAXX_4_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5487:BS381_62457AAXX_4_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5487 5487_BS381_62457AAXX_4_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5487:BS381_62457AAXX_4_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5487 5487_SRR497729.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD8#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5487:SRR497729.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD8#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5488 5488_SRR497711.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5488:SRR497711.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5488 5488_BS377_AC01WMACXX_2_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5488:BS377_AC01WMACXX_2_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5488 5488_BS377_62W20AAXX_5_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5488:BS377_62W20AAXX_5_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5488 5488_BS377_AC01WMACXX_2_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5488:BS377_AC01WMACXX_2_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5488 5488_SRR497714.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5488:SRR497714.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5488 5488_BS377_62W20AAXX_5_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD9#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5488:BS377_62W20AAXX_5_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD9#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5489 5489_BS386_A702EJABXX_2_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5489:BS386_A702EJABXX_2_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5489 5489_BS386_A702EJABXX_2_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5489:BS386_A702EJABXX_2_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5489 5489_SRR497712.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-L1#Developmental-Stage=Larvae-3rd-instar#Tissue=Ventral-prothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5489:SRR497712.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME-L1#Developmental-Stage=Larvae 3rd instar#Tissue=Ventral prothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5490 5490_BS372_AC01WMACXX_1_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5490:BS372_AC01WMACXX_1_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5490 5490_SRR497723.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5490:SRR497723.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5490 5490_SRR497718.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5490:SRR497718.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5490 5490_BS372_62W20AAXX_2_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5490:BS372_62W20AAXX_2_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5490 5490_BS372_62W20AAXX_2_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5490:BS372_62W20AAXX_2_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5490 5490_BS372_AC01WMACXX_1_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae-3rd-instar#Tissue=Antenna-disc-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5490:BS372_AC01WMACXX_1_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=ML-DmD20-c5#Developmental-Stage=Larvae 3rd instar#Tissue=Antenna disc-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5491 5491_BS383_62457AAXX_6_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5491:BS383_62457AAXX_6_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5491 5491_BS383_62457AAXX_6_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5491:BS383_62457AAXX_6_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5491 5491_SRR497713.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S1#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5491:SRR497713.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S1#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5492 5492_BS380_638G8AAXX_3_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5492:BS380_638G8AAXX_3_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5492 5492_SRR497719.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5492:SRR497719.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5492 5492_BS380_638G8AAXX_3_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5492:BS380_638G8AAXX_3_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5492 5492_SRR497722.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5492:SRR497722.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5492 5492_BS380_AC01WMACXX_4_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5492:BS380_AC01WMACXX_4_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5492 5492_BS380_AC01WMACXX_4_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S2R+#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5492:BS380_AC01WMACXX_4_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S2R+#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5493 5493_SRR497721.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5493:SRR497721.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5493 5493_BS388_AB0148ABXX_7_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5493:BS388_AB0148ABXX_7_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5493 5493_BS388_AB0148ABXX_7_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=S3#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5493:BS388_AB0148ABXX_7_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=S3#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5494 5494_SRR497720.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5494:SRR497720.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5494 5494_BS385_AB0148ABXX_5_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5494:BS385_AB0148ABXX_5_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5494 5494_BS385_AB0148ABXX_5_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=Sg4#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5494:BS385_AB0148ABXX_5_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=Sg4#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5495 5495_SRR497730.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5495:SRR497730.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5495 5495_BS378_638G8AAXX_1_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5495:BS378_638G8AAXX_1_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5495 5495_BS378_638G8AAXX_1_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=CME-W2#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5495:BS378_638G8AAXX_1_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Larvae 3rd instar Cell-Line=CME W2#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5496 5496_BS376_62W20AAXX_3_2_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5496:BS376_62W20AAXX_3_2_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5496 5496_BS376_62W20AAXX_3_1_sequence.txt.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5496:BS376_62W20AAXX_3_1_sequence.txt.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5496 5496_SRR497728.fastq.gz D.melanogaster/mRNA/DNA-seq/raw-seqfile_fastq transfrag:Cell-Line=mbn2#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryonic-larval-hemocyte:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5496:SRR497728.fastq.fastq.gz raw-seqfile_fastq D. melanogaster mRNA DNA-seq transfrag Late Embryos Cell-Line=mbn2#Developmental-Stage=Late Embryonic stage#Tissue=Embryonic/larval hemocyte Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5523 5523_KC-PE-CNV.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5523.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5523 5523_DM191.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_5523.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5523 5523_DM188.bam.gz D.melanogaster/Copy-Number-Variation/CNV-seq/alignment_sam Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5523.sam.gz alignment_sam D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5523 5523_DM188.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5523.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5523 5523_DM191.bam.gz D.melanogaster/Copy-Number-Variation/CNV-seq/alignment_sam Replication-Copy-Number:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_5523.sam.gz alignment_sam D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5524 5524_DM189.bam.gz D.melanogaster/Copy-Number-Variation/CNV-seq/alignment_sam Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5524.sam.gz alignment_sam D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5524 5524_DM192.bam.gz D.melanogaster/Copy-Number-Variation/CNV-seq/alignment_sam Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_5524.sam.gz alignment_sam D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5524 5524_S2-PE-CNV.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5524.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5524 5524_DM192.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_5524.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5524 5524_DM189.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5524.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5525 5525_DM190.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5525.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5525 5525_DM193.fastq.gz D.melanogaster/Copy-Number-Variation/CNV-seq/raw-seqfile_fastq Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_5525.fastq.gz raw-seqfile_fastq D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5525 5525_Cl8-PE-CNV.wig.gz D.melanogaster/Copy-Number-Variation/CNV-seq/coverage-graph_wiggle Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5525.wig.gz coverage-graph_wiggle D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5525 5525_DM193.bam.gz D.melanogaster/Copy-Number-Variation/CNV-seq/alignment_sam Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-2::Dmel_r5.32:modENCODE_5525.sam.gz alignment_sam D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5525 5525_DM190.bam.gz D.melanogaster/Copy-Number-Variation/CNV-seq/alignment_sam Replication-Copy-Number:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:CNV-seq:Rep-1::Dmel_r5.32:modENCODE_5525.sam.gz alignment_sam D. melanogaster Copy Number Variation CNV-seq Replication-Copy-Number Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 MacAlpine, D. Copy Number Variation +5526 5526_DM197.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:197.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm198.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:198.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM212.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:212.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm196_dm212.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:196_dm212.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm213.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:213.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm215.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:215.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm214.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:214.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm199_dm215.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:199_dm215.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM215.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:215.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm199.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:199.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM199.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:199.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm196.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:196.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM196.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:196.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM198.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:198.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm212.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:212.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM213.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:213.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm198_dm214.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:198_dm214.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_DM214.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5526:214.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm197_dm213.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:197_dm213.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5526 5526_dm197.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5526:197.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM247.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:47.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM245.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:45.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM248.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:48.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm246_dm250.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:46_dm250.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm247_dm251.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:47_dm251.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm244_dm248.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:44_dm248.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm248.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:48.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm247.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:47.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm245.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:45.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm244.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:44.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM251.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:51.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM249.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:49.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm245_dm249.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:45_dm249.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM250.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:50.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM244.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:44.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm250.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:50.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_DM246.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5527:46.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm251.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:51.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm246.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:46.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5527 5527_dm249.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5527:49.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm258.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:8.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm253.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:3.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm259.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:9.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm255_dm259.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:5_dm259.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm252_dm256.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:2_dm256.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm255.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:5.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm256.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:6.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm254.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:4.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm257.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:7.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm255.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:5.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm253.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:3.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm259.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:9.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm254.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:4.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm254_dm258.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:4_dm258.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm256.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:6.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm258.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:8.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm252.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:2.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm257.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:7.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm253_dm257.wig.gz D.melanogaster/DNA-Replication/DNA-seq/coverage-graph_wiggle Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1::Dmel_r5.32:modENCODE_5528:3_dm257.wig.gz coverage-graph_wiggle D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5528 5528_dm252.fastq.gz D.melanogaster/DNA-Replication/DNA-seq/raw-seqfile_fastq Replication-Timing:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line#base-pair=50-base-pair:DNA-seq:Rep-1:input:Dmel_r5.32:modENCODE_5528:2.fastq.gz raw-seqfile_fastq D. melanogaster DNA Replication DNA-seq Replication-Timing Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line#base pair=50 base pair Rep-1 Dmel_r5.32 MacAlpine, D. Replication +5952 5952_SRR015090.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5952:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5952 5952_SRR015088.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5952:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5952 5952_SRR015092.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5952:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5952 5952_SRR015084.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5952:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5952 5952_SRR015086.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=Kc167#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5952:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=Kc167#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5953 5953_SRR015106.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5953:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5953 5953_SRR015112.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5953:12.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5953 5953_SRR015104.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5953:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5953 5953_SRR015110.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5953:10.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5953 5953_SRR015108.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=S2-DRSC#Developmental-Stage=Late-Embryonic-stage#Tissue=Embryo-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5953:08.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Late Embryos Cell-Line=S2-DRSC#Developmental-Stage=Late Embryonic stage#Tissue=Embryo-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5954 5954_SRR015100.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5954:100.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5954 5954_SRR015098.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5954:098.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5954 5954_SRR015102.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5954:102.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5954 5954_SRR015096.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5954:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5954 5954_SRR015094.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae-3rd-instar#Tissue=CNS-derived-cell-line:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5954:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=ML-DmBG3-c2#Developmental-Stage=Larvae 3rd instar#Tissue=CNS-derived cell-line Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5955 5955_SRR015080.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5955:0.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5955 5955_SRR015074.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5955:4.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5955 5955_SRR015078.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5955:8.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5955 5955_SRR015076.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5955:6.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5955 5955_SRR015082.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae-3rd-instar#Tissue=Dorsal-mesothoracic-disc:RNA-seq:Rep-2::Dmel_r5.32:modENCODE_5955:2.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Larvae 3rd instar Cell-Line=CME-W1-Cl.8+#Developmental-Stage=Larvae 3rd instar#Tissue=Dorsal mesothoracic disc Rep-2 Dmel_r5.32 Celniker, S. Gene Structure +5964 5964_SRR500470.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5964.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5965 5965_SRR500468.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5965.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5966 5966_SRR500469.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=fGS-OSS#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5966.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Cell-Line=fGS/OSS#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5967 5967_SRR500470.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5967.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5968 5968_SRR500468.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5968.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5969 5969_SRR500469.fastq.gz D.melanogaster/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Cell-Line=fGS-OSS#Developmental-Stage=Adult-stage#Tissue=Ovary:RNA-seq:Rep-1::Dmel_r5.32:modENCODE_5969.fastq.gz raw-seqfile_fastq D. melanogaster mRNA RNA-seq total-RNA Adult Cell-Line=fGS/OSS#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5970 5970_SRR500470.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult-stage#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5970.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Adult Cell-Line=OvarySomaticSheet#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5971 5971_SRR500468.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=OvaryStemCells#Developmental-Stage=Adult-stage#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5971.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Adult Cell-Line=OvaryStemCells#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +5972 5972_SRR500469.fastq.gz D.melanogaster/mRNA/integrated-gene-model/raw-seqfile_fastq transfrag:Cell-Line=fGS-OSS#Developmental-Stage=Adult-stage#Tissue=Ovary:integrated-gene-model:Rep-1::Dmel_r5.32:modENCODE_5972.fastq.gz raw-seqfile_fastq D. melanogaster mRNA integrated-gene-model transfrag Adult Cell-Line=fGS/OSS#Developmental-Stage=Adult stage#Tissue=Ovary Rep-1 Dmel_r5.32 Celniker, S. Gene Structure +6435 6435_DauerDAF2.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6435:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6435 6435_DauerDAF2.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6435:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6435 6435_SRR027187.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6435:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6435 6435_DauerDAF2.1112.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6435.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6435 6435_DauerDAF2.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6435:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6435 6435_SRR027188.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-daf-2(e1370)-91-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6435:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer daf-2(e1370) 91 hr post-L1 stage larvae Developmental-Stage=Dauer daf-2(e1370) 91 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_SRR358692.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:92.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_DauerEntryDAF2-1-1.1112.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_SRR358691.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:91.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_DauerEntryDAF2-1-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_SRR358688.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:88.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_DauerEntryDAF2-1-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_SRR358690.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:90.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_DauerEntryDAF2-1-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6436 6436_SRR358689.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-entry-daf-2(e1370)-48-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6436:89.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer entry daf-2(e1370) 48 hr post-L1 stage larvae Developmental-Stage=Dauer entry daf-2(e1370) 48 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_SRR358687.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_DauerExitDAF2-3-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_DauerExitDAF2-3-1.1112.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_SRR358685.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_DauerExitDAF2-3-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_SRR358683.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:3.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_DauerExitDAF2-3-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_SRR358684.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:4.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6437 6437_SRR358686.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6437:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_DauerExitDAF2-6-1.raw_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:raw.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_SRR358695.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:5.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_SRR358698.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:8.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_SRR358699.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:9.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_DauerExitDAF2-6-1.raw_normalized_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:raw_normalized.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_SRR358697.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:7.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_SRR358696.fastq.gz C.elegans/mRNA/RNA-seq/raw-seqfile_fastq total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:6.fastq.gz raw-seqfile_fastq C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_DauerExitDAF2-6-1.win_covg.ws220.wig.gz C.elegans/mRNA/RNA-seq/coverage-graph_wiggle total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438:win.wig.gz coverage-graph_wiggle C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6438 6438_DauerExitDAF2-6-1.1112.sam.gz C.elegans/mRNA/RNA-seq/alignment_sam total-RNA:Developmental-Stage=Dauer-exit-daf-2(e1370)-91-hrs-15dC-12-hrs-post-L1-stage-larvae#Strain=daf-2(e1370)#temperature=25-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6438.sam.gz alignment_sam C. elegans mRNA RNA-seq total-RNA Dauer exit daf-2(e1370) 91 hr 15dC 12 hrs post-L1 stage larvae Developmental-Stage=Dauer exit daf-2(e1370) 91 hrs 15dC 12 hrs post-L1 stage larvae#Strain=daf-2(e1370)#temperature=25 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6496 6496_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6496:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6496 6496_Egg_s_3.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6496.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6496 6496_SRR014966.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mixed-stage-of-Embryos#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6496:014966.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mixed stage of Embryos Developmental-Stage=Mixed stage of Embryos#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6497 6497_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6497:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6497 6497_L1_s_5.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6497.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6497 6497_SRR014967.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L1-4-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6497:014967.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L1 4 hr post-L1 stage larvae Developmental-Stage=Mid-L1 4 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6498 6498_SRR014968.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6498:014968.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6498 6498_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6498:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6498 6498_L2_s_6.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mid-L2-14-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6498.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mid-L2 14 hr post-L1 stage larvae Developmental-Stage=Mid-L2 14 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6499 6499_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6499:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6499 6499_SRR014969.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6499:014969.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6499 6499_L3_s_7.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mid-L3-25-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6499.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mid-L3 25 hr post-L1 stage larvae Developmental-Stage=Mid-L3 25 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6500 6500_SRR014970.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6500:014970.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6500 6500_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6500:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6500 6500_L4_s_8.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Mid-L4-36-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6500.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Mid-L4 36 hr post-L1 stage larvae Developmental-Stage=Mid-L4 36 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6501 6501_SRR014971.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6501:014971.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6501 6501_Adult_s_1.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6501.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6501 6501_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-48-hrs-post-L1-stage-larvae#Strain=N2:RNA-seq:Rep-1::Cele_WS220:modENCODE_6501:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult 48 hr post-L1 stage larvae Developmental-Stage=Young adult 48 hrs post-L1 stage larvae#Strain=N2 Rep-1 Cele_WS220 Waterston, R. Gene Structure +6502 6502_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):RNA-seq:Rep-1::Cele_WS220:modENCODE_6502:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +6502 6502_SRR014972.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):RNA-seq:Rep-1::Cele_WS220:modENCODE_6502:014972.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +6502 6502_yMale_dpyhim_s_6.S-3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-Adult-Males#Strain=dpy28(y1)-him-8(e1489):RNA-seq:Rep-1::Cele_WS220:modENCODE_6502.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult Males Developmental-Stage=Young Adult Males#Strain=dpy28(y1) him-8(e1489) Rep-1 Cele_WS220 Waterston, R. Gene Structure +6503 6503_spe9day0_rep_s_6.S3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6503:rep_s_6.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6503 6503_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6503:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6503 6503_spe9day0_s_1.S3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6503:s_1.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6503 6503_SRR032279.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6503:032279.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6503 6503_SRR032283.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY0-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6503:032283.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY0 post-L4 molt stage larvae Developmental-Stage=Young adult DAY0 post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6504 6504_spe9day5_s_2.S3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6504.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6504 6504_SRR032280.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6504:032280.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6504 6504_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-5-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6504:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 5 days post-L4 stage larvae Developmental-Stage=Adult 5 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6505 6505_SRR032281.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6505:032281.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6505 6505_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6505:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6505 6505_SRR032284.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6505:032284.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6505 6505_spe9day8_s_3.S3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6505:s_3.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6505 6505_spe9day8_rep_s_7.S3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-spe-9(hc88)-8-days-post-L4-molt-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6505:rep_s_7.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult spe-9(hc88) 8 days post-L4 molt stage larvae Developmental-Stage=Adult spe-9(hc88) 8 days post-L4 molt stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6506 6506_SRR032282.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6506:032282.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6506 6506_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6506:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6506 6506_spe9day12_s_5.S3.soap.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Adult-12-days-post-L4-stage-larvae#Strain=spe-9(hc88)#temperature=23-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6506.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Adult 12 days post-L4 stage larvae Developmental-Stage=Adult 12 days post-L4 stage larvae#Strain=spe-9(hc88)#temperature=23 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6507 6507_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6507:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6507 6507_SRR077254.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6507:077254.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6507 6507_Control_Day1_wt_FC42B89HM_s_1_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6507.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6508 6508_Heatshock_Day1_wt_FC42B89HM_s_2_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6508.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6508 6508_SRR077255.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6508:07725.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6508 6508_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6508:38491.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6509 6509_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6509:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6509 6509_SRR077256.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6509:077256.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6509 6509_PA14_Day1_wt_FC42B89HM_s_5_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=Young-adult-DAY1post-L4-molt-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6509.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA Young Adult DAY1post-L4 molt stage larvae Developmental-Stage=Young adult DAY1post-L4 molt stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6510 6510_SRR077257.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6510:077257.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6510 6510_L1_arrest_FC42B89HM_s_4_elegans.dna_SOAP_S3w5.sam.gz C.elegans/small-RNA/RNA-seq/alignment_sam small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6510.sam.gz alignment_sam C. elegans small RNA RNA-seq small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure +6510 6510_SRR384915.fastq.gz C.elegans/small-RNA/RNA-seq/raw-seqfile_fastq small-RNA:Developmental-Stage=L1-arrest--24-hr-post-L1-stage-larvae#Strain=N2#temperature=20-degree-celsius:RNA-seq:Rep-1::Cele_WS220:modENCODE_6510:384915.fastq.gz raw-seqfile_fastq C. elegans small RNA RNA-seq small-RNA L1 arrest 24 hr post-L1 stage larvae Developmental-Stage=L1 arrest 24 hr post-L1 stage larvae#Strain=N2#temperature=20 degree celsius Rep-1 Cele_WS220 Waterston, R. Gene Structure diff --git a/release/metadata_mirror.csv b/release/metadata_mirror.csv index dcc100e..b2ed602 100644 --- a/release/metadata_mirror.csv +++ b/release/metadata_mirror.csv @@ -1,9 +1,239 @@ DCC id Title Data File Data Filepath Level 1 Level 2 Level 3 Level 4 Filename Filename Filename Filename Filename Filename