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Copy pathAnesthesia_DPTALIRO.m
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Anesthesia_DPTALIRO.m
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% Preparation of the data
T1 = readtable('patient1_final.xlsx');
h1 = height(T1);
w1 = width(T1);
Tableau1=zeros(h1,w1);
for colonne = 1:w1
temp = T1(:,colonne).Variables;
if colonne == 1
temp = temp/10000000000;
end
if ~iscell(temp(2))
value = 0;
for ligne = 1:h1
if (~isnan(temp(ligne)))
if temp(ligne)==0 && ligne>1
Tableau1(ligne,colonne) = value;
else
value = temp(ligne);
Tableau1(ligne,colonne) = value;
end
else
Tableau1(ligne,colonne) = value;
end
end
else
value = 0;
for ligne = 1:h1
cell=temp(ligne);
if cell{1,1}==""
Tableau1(ligne,colonne) = value;
else
value=str2double(cell{1,1});
Tableau1(ligne,colonne) = value;
end
end
end
end
T2 = readtable('patient2_final.xlsx');
h2 = height(T2);
w2 = width(T2);
Tableau2=zeros(h,w2);
for colonne = 1:w2
temp = T2(:,colonne).Variables;
if colonne == 1
temp = temp/10000000000;
end
if ~iscell(temp(2))
value = 0;
for ligne = 1:h2
if (~isnan(temp(ligne)))
if temp(ligne)==0 && ligne>1
Tableau2(ligne,colonne) = value;
else
value = temp(ligne);
Tableau2(ligne,colonne) = value;
end
else
Tableau2(ligne,colonne) = value;
end
end
else
value = 0;
for ligne = 1:h2
cell=temp(ligne);
if cell{1,1}==""
Tableau2(ligne,colonne) = value;
else
value=str2double(cell{1,1});
Tableau2(ligne,colonne) = value;
end
end
end
end
T3 = readtable('patient3_final.xlsx');
h3 = height(T3);
w3 = width(T3);
Tableau3=zeros(h3,w3);
for colonne = 1:w3
temp = T3(:,colonne).Variables;
if colonne == 1
temp = temp/10000000000;
end
if ~iscell(temp(2))
value = 0;
for ligne = 1:h3
if (~isnan(temp(ligne)))
if temp(ligne)==0 && ligne>1
Tableau3(ligne,colonne) = value;
else
value = temp(ligne);
Tableau3(ligne,colonne) = value;
end
else
Tableau3(ligne,colonne) = value;
end
end
else
value = 0;
for ligne = 1:h3
cell=temp(ligne);
if cell{1,1}==""
Tableau3(ligne,colonne) = value;
else
value=str2double(cell{1,1});
Tableau3(ligne,colonne) = value;
end
end
end
end
T4 = readtable('patient4_final.xlsx');
h4 = height(T4);
w4 = width(T4);
Tableau4=zeros(h4,w4);
for colonne = 1:w4
temp = T4(:,colonne).Variables;
if colonne == 1
temp = temp/10000000000;
end
if ~iscell(temp(2))
value = 0;
for ligne = 1:h4
if (~isnan(temp(ligne)))
if temp(ligne)==0 && ligne>1
Tableau4(ligne,colonne) = value;
else
value = temp(ligne);
Tableau4(ligne,colonne) = value;
end
else
Tableau4(ligne,colonne) = value;
end
end
else
value = 0;
for ligne = 1:h4
cell=temp(ligne);
if cell{1,1}==""
Tableau4(ligne,colonne) = value;
else
value=str2double(cell{1,1});
Tableau4(ligne,colonne) = value;
end
end
end
end
%Calculating the derivatives #BASIC
dt1 = Tableau1(2,1) - Tableau1(1,1);
Tableau1_dot_basic=zeros(h1,w1);
for colonne = 2:w1
for ligne = 1:h1-1
Tableau1_dot_basic(ligne, colonne) = (Tableau1(ligne +1,colonne) - Tableau1(ligne,colonne))/1.0;
end
end
dt2 = Tableau2(2,1) - Tableau2(1,1);
Tableau2_dot_basic=zeros(h2,w2);
for colonne = 2:w2
for ligne = 1:h2-1
Tableau2_dot_basic(ligne, colonne) = (Tableau2(ligne +1,colonne) - Tableau2(ligne,colonne))/1.0;
end
end
dt3 = Tableau3(2,1) - Tableau3(1,1);
Tableau3_dot_basic=zeros(h3,w3);
for colonne = 2:w3
for ligne = 1:h3-1
Tableau3_dot_basic(ligne, colonne) = (Tableau3(ligne +1,colonne) - Tableau3(ligne,colonne))/1.0;
end
end
dt4 = Tableau4(2,1) - Tableau4(1,1);
Tableau4_dot_basic=zeros(h4,w4);
for colonne = 2:w4
for ligne = 1:h4-1
Tableau4_dot_basic(ligne, colonne) = (Tableau4(ligne +1,colonne) - Tableau4(ligne,colonne))/1.0;
end
end
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%% Definition of seqS_basic %%%%%%%%%%%%%%%
seqS_basic1= cat(2,Tableau1(:,[2 3 4 5 6 7]),Tableau1_dot_basic(:,[2 3 4 5 6 7]));
seqS_basic2= cat(2,Tableau2(:,[2 3 4 5 6 7]),Tableau2_dot_basic(:,[2 3 4 5 6 7]));
seqS_basic3= cat(2,Tableau3(:,[2 3 4 5 6 7]),Tableau3_dot_basic(:,[2 3 4 5 6 7]));
seqS_basic4= cat(2,Tableau4(:,[2 3 4 5 6 7]),Tableau4_dot_basic(:,[2 3 4 5 6 7]));
%%%%%%%%%%%%%%%% Definition of seqT %%%%%%%%%%%%%%%
seqT1= Tableau1(:,1);
seqT2= Tableau2(:,1);
seqT3= Tableau3(:,1);
seqT4= Tableau4(:,1);
%%%%%%%%%%%%%%%% Definition of Predicates "hypotensia" %%%%%%%%%%%%%%%%
% MAP needs to be > 70
ii = 1;
preds_basic(ii).str = 'hypo1';
preds_basic(ii).A = [0 0 0 0 0 -1 0 0 0 0 0 0 ];
preds_basic(ii).b = [-70];
% Or MAP' needs to be > -20
ii = ii +1;
preds_basic(ii).str = 'hypo2';
preds_basic(ii).A = [0 0 0 0 0 0 0 0 0 0 0 -1 ];
preds_basic(ii).b = [20];
%And MAP needs to be > 65 anyways
ii = ii +1;
preds_basic(ii).str = 'hypo3';
preds_basic(ii).A = [0 0 0 0 0 -1 0 0 0 0 0 0 ];
preds_basic(ii).b = [-65];
%Definition of the MTL formula
phi_hypo = '([] ( ((hypo1)\/(hypo2)) /\ (hypo3) ))' ;
%%%%%%%%%%%%%%%% Definition of Predicates "hypertensia" %%%%%%%%%%%%%%%%
% MAP needs to be < 90
ii = ii +1;
preds_basic(ii).str = 'hyper1';
preds_basic(ii).A = [0 0 0 0 0 1 0 0 0 0 0 0 ];
preds_basic(ii).b = [90];
% Or MAP' needs to be < 20
ii = ii +1;
preds_basic(ii).str = 'hyper2';
preds_basic(ii).A = [0 0 0 0 0 0 0 0 0 0 0 1 ];
preds_basic(ii).b = [20];
%And MAP needs to be < 110 anyways
ii = ii +1;
preds_basic(ii).str = 'hyper3';
preds_basic(ii).A = [0 0 0 0 0 1 0 0 0 0 0 0 ];
preds_basic(ii).b = [110];
%Definition of the MTL formula
phi_hyper = '([] ( ((hyper1)\/(hyper2)) /\ (hyper3) ))';
%%%%%%%%%%%%%%%% Definition of Predicates "Induction of anesthesia" %%%%%%%%%%%%%%%%
%PSI e [80,100] (before)
ii = ii +1;
preds_basic(ii).str = 'depth1';
preds_basic(ii).A = [0 0 0 1 0 0 0 0 0 0 0 0 ];
preds_basic(ii).b = [100];
ii = ii +1;
preds_basic(ii).str = 'depth2';
preds_basic(ii).A = [0 0 0 -1 0 0 0 0 0 0 0 0 ];
preds_basic(ii).b = [-80];
%PSI e [25,50] (after)
ii = ii +1;
preds_basic(ii).str = 'depth3';
preds_basic(ii).A = [0 0 0 1 0 0 0 0 0 0 0 0 ];
preds_basic(ii).b = [50];
ii = ii +1;
preds_basic(ii).str = 'depth4';
preds_basic(ii).A = [0 0 0 -1 0 0 0 0 0 0 0 0 ];
preds_basic(ii).b = [-25];
%Propofol > 9 (trigger)
ii = ii +1;
preds_basic(ii).str = 'depth5';
preds_basic(ii).A = [0 -1 0 0 0 0 0 0 0 0 0 0 ];
preds_basic(ii).b = [-9];
%Definition of the MTL formula
phi_depth = '([] (depth1/\depth2) U (depth5 /\ (<>(depth1/\depth2)) ) )';
%%%%%%%%%%%%%%%% Definition of the MTL formula %%%%%%%%%%%%%%%
phi_basic = '([] ( ((hypo1)\/(hypo2)) /\ (hypo3) )) /\ ([] ( ((hyper1)\/(hyper2)) /\ (hyper3) )) /\ ([] (depth1/\depth2) U (depth5 /\ (<>(depth1/\depth2)) ) )';
rob1 = dp_taliro(phi_basic, preds_basic, seqS_basic1, seqT1);
rob2 = dp_taliro(phi_basic, preds_basic, seqS_basic2, seqT2);
rob3 = dp_taliro(phi_basic, preds_basic, seqS_basic3, seqT3);
rob4 = dp_taliro(phi_basic, preds_basic, seqS_basic4, seqT4);