diff --git a/docs/ClassDefinition/index.html b/docs/ClassDefinition/index.html
index 22cfd677..4cd67734 100644
--- a/docs/ClassDefinition/index.html
+++ b/docs/ClassDefinition/index.html
@@ -102,7 +102,7 @@
                 <h1 id="class-class_definition">Class: class_definition</h1>
 <p>the definition of a class or interface</p>
 <p>URI: <a href="https://w3id.org/linkml/ClassDefinition">linkml:ClassDefinition</a></p>
-<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotDefinition],[SchemaDefinition],[LocalName],[Extension],[Example],[Definition],[ClassRule],[ClassExpression],[ClassDefinition]&lt;apply_to%200..*-%20[ClassDefinition&#124;class_uri:uriorcurie%20%3F;subclass_of:uriorcurie%20%3F;tree_root:boolean%20%3F;slot_names_unique:boolean%20%3F;represents_relationship:boolean%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[ClassDefinition]&lt;mixins%200..*-%20[ClassDefinition],[ClassDefinition]&lt;is_a%200..1-%20[ClassDefinition],[AnonymousClassExpression]&lt;classification_rules%200..*-++[ClassDefinition],[ClassRule]&lt;rules%200..*-++[ClassDefinition],[UniqueKey]&lt;unique_keys%200..*-++[ClassDefinition],[SlotDefinition]&lt;defining_slots%200..*-%20[ClassDefinition],[ClassDefinition]&lt;union_of%200..*-%20[ClassDefinition],[SlotDefinition]&lt;attributes%200..*-++[ClassDefinition],[SlotDefinition]&lt;slot_usage%200..*-++[ClassDefinition],[SlotDefinition]&lt;slots%200..*-%20[ClassDefinition],[SchemaDefinition]++-%20classes%200..*&gt;[ClassDefinition],[SlotDefinition]-%20domain%200..1&gt;[ClassDefinition],[SlotDefinition]-%20domain_of%200..*&gt;[ClassDefinition],[ClassDefinition]uses%20-.-&gt;[ClassExpression],[Definition]^-[ClassDefinition],[AnonymousClassExpression],[Annotation],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotDefinition],[SchemaDefinition],[LocalName],[Extension],[Example],[Definition],[ClassRule],[ClassExpression],[ClassDefinition]&lt;apply_to%200..*-%20[ClassDefinition&#124;class_uri:uriorcurie%20%3F;subclass_of:uriorcurie%20%3F;tree_root:boolean%20%3F;slot_names_unique:boolean%20%3F;represents_relationship:boolean%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[ClassDefinition]&lt;mixins%200..*-%20[ClassDefinition],[ClassDefinition]&lt;is_a%200..1-%20[ClassDefinition],[AnonymousClassExpression]&lt;classification_rules%200..*-++[ClassDefinition],[ClassRule]&lt;rules%200..*-++[ClassDefinition],[UniqueKey]&lt;unique_keys%200..*-++[ClassDefinition],[SlotDefinition]&lt;defining_slots%200..*-%20[ClassDefinition],[ClassDefinition]&lt;union_of%200..*-%20[ClassDefinition],[SlotDefinition]&lt;attributes%200..*-++[ClassDefinition],[SlotDefinition]&lt;slot_usage%200..*-++[ClassDefinition],[SlotDefinition]&lt;slots%200..*-%20[ClassDefinition],[SchemaDefinition]++-%20classes%200..*&gt;[ClassDefinition],[SlotDefinition]-%20domain%200..1&gt;[ClassDefinition],[SlotDefinition]-%20domain_of%200..*&gt;[ClassDefinition],[ClassDefinition]uses%20-.-&gt;[ClassExpression],[Definition]^-[ClassDefinition],[AnonymousClassExpression],[Annotation],[AltDescription]" /></a></p>
+<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotDefinition],[SchemaDefinition],[LocalName],[Extension],[Example],[Definition],[ClassRule],[ClassExpression],[ClassDefinition]&lt;apply_to%200..*-%20[ClassDefinition&#124;class_uri:uriorcurie%20%3F;subclass_of:uriorcurie%20%3F;tree_root:boolean%20%3F;slot_names_unique:boolean%20%3F;represents_relationship:boolean%20%3F;children_are_mutually_disjoint:boolean%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[ClassDefinition]&lt;mixins%200..*-%20[ClassDefinition],[ClassDefinition]&lt;is_a%200..1-%20[ClassDefinition],[ClassDefinition]&lt;disjoint_with%200..*-%20[ClassDefinition],[AnonymousClassExpression]&lt;classification_rules%200..*-++[ClassDefinition],[ClassRule]&lt;rules%200..*-++[ClassDefinition],[UniqueKey]&lt;unique_keys%200..*-++[ClassDefinition],[SlotDefinition]&lt;defining_slots%200..*-%20[ClassDefinition],[ClassDefinition]&lt;union_of%200..*-%20[ClassDefinition],[SlotDefinition]&lt;attributes%200..*-++[ClassDefinition],[SlotDefinition]&lt;slot_usage%200..*-++[ClassDefinition],[SlotDefinition]&lt;slots%200..*-%20[ClassDefinition],[SchemaDefinition]++-%20classes%200..*&gt;[ClassDefinition],[SlotDefinition]-%20domain%200..1&gt;[ClassDefinition],[SlotDefinition]-%20domain_of%200..*&gt;[ClassDefinition],[ClassDefinition]uses%20-.-&gt;[ClassExpression],[Definition]^-[ClassDefinition],[AnonymousClassExpression],[Annotation],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotDefinition],[SchemaDefinition],[LocalName],[Extension],[Example],[Definition],[ClassRule],[ClassExpression],[ClassDefinition]&lt;apply_to%200..*-%20[ClassDefinition&#124;class_uri:uriorcurie%20%3F;subclass_of:uriorcurie%20%3F;tree_root:boolean%20%3F;slot_names_unique:boolean%20%3F;represents_relationship:boolean%20%3F;children_are_mutually_disjoint:boolean%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[ClassDefinition]&lt;mixins%200..*-%20[ClassDefinition],[ClassDefinition]&lt;is_a%200..1-%20[ClassDefinition],[ClassDefinition]&lt;disjoint_with%200..*-%20[ClassDefinition],[AnonymousClassExpression]&lt;classification_rules%200..*-++[ClassDefinition],[ClassRule]&lt;rules%200..*-++[ClassDefinition],[UniqueKey]&lt;unique_keys%200..*-++[ClassDefinition],[SlotDefinition]&lt;defining_slots%200..*-%20[ClassDefinition],[ClassDefinition]&lt;union_of%200..*-%20[ClassDefinition],[SlotDefinition]&lt;attributes%200..*-++[ClassDefinition],[SlotDefinition]&lt;slot_usage%200..*-++[ClassDefinition],[SlotDefinition]&lt;slots%200..*-%20[ClassDefinition],[SchemaDefinition]++-%20classes%200..*&gt;[ClassDefinition],[SlotDefinition]-%20domain%200..1&gt;[ClassDefinition],[SlotDefinition]-%20domain_of%200..*&gt;[ClassDefinition],[ClassDefinition]uses%20-.-&gt;[ClassExpression],[Definition]^-[ClassDefinition],[AnonymousClassExpression],[Annotation],[AltDescription]" /></a></p>
 <h2 id="parents">Parents</h2>
 <ul>
 <li>is_a: <a href="../Definition/">Definition</a> - base class for definitions</li>
@@ -114,6 +114,7 @@ <h2 id="uses-mixin">Uses Mixin</h2>
 <h2 id="referenced-by-class">Referenced by Class</h2>
 <ul>
 <li><strong><a href="./">ClassDefinition</a></strong> <em><a href="../class_definition_apply_to/">class_definition➞apply_to</a></em>  <sub>0..*</sub>  <strong><a href="./">ClassDefinition</a></strong></li>
+<li><strong><a href="./">ClassDefinition</a></strong> <em><a href="../class_definition_disjoint_with/">class_definition➞disjoint_with</a></em>  <sub>0..*</sub>  <strong><a href="./">ClassDefinition</a></strong></li>
 <li><strong><a href="./">ClassDefinition</a></strong> <em><a href="../class_definition_is_a/">class_definition➞is_a</a></em>  <sub>0..1</sub>  <strong><a href="./">ClassDefinition</a></strong></li>
 <li><strong><a href="./">ClassDefinition</a></strong> <em><a href="../class_definition_mixins/">class_definition➞mixins</a></em>  <sub>0..*</sub>  <strong><a href="./">ClassDefinition</a></strong></li>
 <li><strong><a href="../SchemaDefinition/">SchemaDefinition</a></strong> <em><a href="../classes/">classes</a></em>  <sub>0..*</sub>  <strong><a href="./">ClassDefinition</a></strong></li>
@@ -189,6 +190,16 @@ <h3 id="own">Own</h3>
 <li>Range: <a href="../Boolean/">Boolean</a></li>
 </ul>
 </li>
+<li><a href="../class_definition_disjoint_with/">class_definition➞disjoint_with</a>  <sub>0..*</sub><ul>
+<li>Description: Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances</li>
+<li>Range: <a href="./">ClassDefinition</a></li>
+</ul>
+</li>
+<li><a href="../children_are_mutually_disjoint/">children_are_mutually_disjoint</a>  <sub>0..1</sub><ul>
+<li>Description: If true then all direct is_a children are mutually disjoint and share no instances in common</li>
+<li>Range: <a href="../Boolean/">Boolean</a></li>
+</ul>
+</li>
 <li><a href="../class_definition_is_a/">class_definition➞is_a</a>  <sub>0..1</sub><ul>
 <li>Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded</li>
 <li>Range: <a href="./">ClassDefinition</a></li>
diff --git a/docs/Definition/index.html b/docs/Definition/index.html
index b052492f..3f3000c7 100644
--- a/docs/Definition/index.html
+++ b/docs/Definition/index.html
@@ -102,7 +102,7 @@
                 <h1 id="class-definition">Class: definition</h1>
 <p>base class for definitions</p>
 <p>URI: <a href="https://w3id.org/linkml/Definition">linkml:Definition</a></p>
-<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[SubsetDefinition],[SlotDefinition],[LocalName],[Extension],[Example],[Element],[Definition]&lt;apply_to%200..*-%20[Definition&#124;abstract:boolean%20%3F;mixin:boolean%20%3F;values_from:uriorcurie%20*;created_by:uriorcurie%20%3F;created_on:datetime%20%3F;last_updated_on:datetime%20%3F;modified_by:uriorcurie%20%3F;status:uriorcurie%20%3F;string_serialization:string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[Definition]&lt;mixins%200..*-%20[Definition],[Definition]&lt;is_a%200..1-%20[Definition],[SlotDefinition]-%20owner%200..1&gt;[Definition],[Definition]^-[SlotDefinition],[Definition]^-[ClassDefinition],[Element]^-[Definition],[ClassDefinition],[Annotation],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[SubsetDefinition],[SlotDefinition],[LocalName],[Extension],[Example],[Element],[Definition]&lt;apply_to%200..*-%20[Definition&#124;abstract:boolean%20%3F;mixin:boolean%20%3F;values_from:uriorcurie%20*;created_by:uriorcurie%20%3F;created_on:datetime%20%3F;last_updated_on:datetime%20%3F;modified_by:uriorcurie%20%3F;status:uriorcurie%20%3F;string_serialization:string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[Definition]&lt;mixins%200..*-%20[Definition],[Definition]&lt;is_a%200..1-%20[Definition],[SlotDefinition]-%20owner%200..1&gt;[Definition],[Definition]^-[SlotDefinition],[Definition]^-[ClassDefinition],[Element]^-[Definition],[ClassDefinition],[Annotation],[AltDescription]" /></a></p>
+<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[SubsetDefinition],[SlotDefinition],[LocalName],[Extension],[Example],[Element],[Definition]&lt;apply_to%200..*-%20[Definition&#124;abstract:boolean%20%3F;mixin:boolean%20%3F;values_from:uriorcurie%20*;created_by:uriorcurie%20%3F;created_on:datetime%20%3F;last_updated_on:datetime%20%3F;modified_by:uriorcurie%20%3F;status:uriorcurie%20%3F;string_serialization:string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[Definition]&lt;mixins%200..*-%20[Definition],[Definition]&lt;is_a%200..1-%20[Definition],[SlotDefinition]-%20disjoint_with(i)%200..*&gt;[Definition],[ClassDefinition]-%20disjoint_with(i)%200..*&gt;[Definition],[SlotDefinition]-%20owner%200..1&gt;[Definition],[Definition]^-[SlotDefinition],[Definition]^-[ClassDefinition],[Element]^-[Definition],[ClassDefinition],[Annotation],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[SubsetDefinition],[SlotDefinition],[LocalName],[Extension],[Example],[Element],[Definition]&lt;apply_to%200..*-%20[Definition&#124;abstract:boolean%20%3F;mixin:boolean%20%3F;values_from:uriorcurie%20*;created_by:uriorcurie%20%3F;created_on:datetime%20%3F;last_updated_on:datetime%20%3F;modified_by:uriorcurie%20%3F;status:uriorcurie%20%3F;string_serialization:string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[Definition]&lt;mixins%200..*-%20[Definition],[Definition]&lt;is_a%200..1-%20[Definition],[SlotDefinition]-%20disjoint_with(i)%200..*&gt;[Definition],[ClassDefinition]-%20disjoint_with(i)%200..*&gt;[Definition],[SlotDefinition]-%20owner%200..1&gt;[Definition],[Definition]^-[SlotDefinition],[Definition]^-[ClassDefinition],[Element]^-[Definition],[ClassDefinition],[Annotation],[AltDescription]" /></a></p>
 <h2 id="parents">Parents</h2>
 <ul>
 <li>is_a: <a href="../Element/">Element</a> - a named element in the model</li>
@@ -115,6 +115,7 @@ <h2 id="children">Children</h2>
 <h2 id="referenced-by-class">Referenced by Class</h2>
 <ul>
 <li><strong><a href="./">Definition</a></strong> <em><a href="../apply_to/">apply_to</a></em>  <sub>0..*</sub>  <strong><a href="./">Definition</a></strong></li>
+<li><strong><a href="./">Definition</a></strong> <em><a href="../disjoint_with/">disjoint_with</a></em>  <sub>0..*</sub>  <strong><a href="./">Definition</a></strong></li>
 <li><strong><a href="./">Definition</a></strong> <em><a href="../is_a/">is_a</a></em>  <sub>0..1</sub>  <strong><a href="./">Definition</a></strong></li>
 <li><strong><a href="./">Definition</a></strong> <em><a href="../mixins/">mixins</a></em>  <sub>0..*</sub>  <strong><a href="./">Definition</a></strong></li>
 <li><strong><a href="../SlotDefinition/">SlotDefinition</a></strong> <em><a href="../owner/">owner</a></em>  <sub>0..1</sub>  <strong><a href="./">Definition</a></strong></li>
diff --git a/docs/PermissibleValue/index.html b/docs/PermissibleValue/index.html
index ef11ba27..165ecaec 100644
--- a/docs/PermissibleValue/index.html
+++ b/docs/PermissibleValue/index.html
@@ -276,6 +276,23 @@ <h3 id="mixed-in-from-common_metadata_13">Mixed in from common_metadata:</h3>
 </ul>
 </li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>PV</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/SlotDefinition/index.html b/docs/SlotDefinition/index.html
index 87bb1451..8f449888 100644
--- a/docs/SlotDefinition/index.html
+++ b/docs/SlotDefinition/index.html
@@ -102,7 +102,7 @@
                 <h1 id="class-slot_definition">Class: slot_definition</h1>
 <p>the definition of a property or a slot</p>
 <p>URI: <a href="https://w3id.org/linkml/SlotDefinition">linkml:SlotDefinition</a></p>
-<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotExpression],[SlotDefinition]&lt;apply_to%200..*-%20[SlotDefinition&#124;singular_name:string%20%3F;slot_uri:uriorcurie%20%3F;multivalued:boolean%20%3F;inherited:boolean%20%3F;readonly:string%20%3F;ifabsent:string%20%3F;inlined:boolean%20%3F;inlined_as_list:boolean%20%3F;key:boolean%20%3F;identifier:boolean%20%3F;designates_type:boolean%20%3F;alias:string%20%3F;symmetric:boolean%20%3F;reflexive:boolean%20%3F;locally_reflexive:boolean%20%3F;irreflexive:boolean%20%3F;asymmetric:boolean%20%3F;transitive:boolean%20%3F;is_class_field:boolean%20%3F;role:string%20%3F;is_usage_slot:boolean%20%3F;usage_slot_name:string%20%3F;relational_role:relational_role_enum%20%3F;is_grouping_slot:boolean%20%3F;required:boolean%20%3F;recommended:boolean%20%3F;minimum_value:integer%20%3F;maximum_value:integer%20%3F;pattern:string%20%3F;equals_string:string%20%3F;equals_string_in:string%20*;equals_number:integer%20%3F;equals_expression:string%20%3F;minimum_cardinality:integer%20%3F;maximum_cardinality:integer%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[SlotDefinition]&lt;mixins%200..*-%20[SlotDefinition],[SlotDefinition]&lt;is_a%200..1-%20[SlotDefinition],[PathExpression]&lt;path_rule%200..1-++[SlotDefinition],[SlotDefinition]&lt;slot_group%200..1-%20[SlotDefinition],[SlotDefinition]&lt;reflexive_transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;inverse%200..1-%20[SlotDefinition],[SlotDefinition]&lt;subproperty_of%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain_of%200..*-%20[SlotDefinition],[Definition]&lt;owner%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain%200..1-%20[SlotDefinition],[SlotExpression]++-%20all_members%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20attributes%200..*&gt;[SlotDefinition],[ClassDefinition]-%20defining_slots%200..*&gt;[SlotDefinition],[ClassExpression]++-%20slot_conditions%200..*&gt;[SlotDefinition],[SchemaDefinition]++-%20slots%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20slot_usage%200..*&gt;[SlotDefinition],[ClassDefinition]-%20slots%200..*&gt;[SlotDefinition],[PathExpression]-%20traverse%200..1&gt;[SlotDefinition],[UniqueKey]-%20unique_key_slots%201..*&gt;[SlotDefinition],[SlotDefinition]uses%20-.-&gt;[SlotExpression],[Definition]^-[SlotDefinition],[SchemaDefinition],[PathExpression],[LocalName],[Extension],[Example],[Element],[Definition],[ClassExpression],[ClassDefinition],[AnonymousSlotExpression],[AnonymousClassExpression],[Annotation],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotExpression],[SlotDefinition]&lt;apply_to%200..*-%20[SlotDefinition&#124;singular_name:string%20%3F;slot_uri:uriorcurie%20%3F;multivalued:boolean%20%3F;inherited:boolean%20%3F;readonly:string%20%3F;ifabsent:string%20%3F;inlined:boolean%20%3F;inlined_as_list:boolean%20%3F;key:boolean%20%3F;identifier:boolean%20%3F;designates_type:boolean%20%3F;alias:string%20%3F;symmetric:boolean%20%3F;reflexive:boolean%20%3F;locally_reflexive:boolean%20%3F;irreflexive:boolean%20%3F;asymmetric:boolean%20%3F;transitive:boolean%20%3F;is_class_field:boolean%20%3F;role:string%20%3F;is_usage_slot:boolean%20%3F;usage_slot_name:string%20%3F;relational_role:relational_role_enum%20%3F;is_grouping_slot:boolean%20%3F;required:boolean%20%3F;recommended:boolean%20%3F;minimum_value:integer%20%3F;maximum_value:integer%20%3F;pattern:string%20%3F;equals_string:string%20%3F;equals_string_in:string%20*;equals_number:integer%20%3F;equals_expression:string%20%3F;minimum_cardinality:integer%20%3F;maximum_cardinality:integer%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[SlotDefinition]&lt;mixins%200..*-%20[SlotDefinition],[SlotDefinition]&lt;is_a%200..1-%20[SlotDefinition],[PathExpression]&lt;path_rule%200..1-++[SlotDefinition],[SlotDefinition]&lt;slot_group%200..1-%20[SlotDefinition],[SlotDefinition]&lt;reflexive_transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;inverse%200..1-%20[SlotDefinition],[SlotDefinition]&lt;subproperty_of%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain_of%200..*-%20[SlotDefinition],[Definition]&lt;owner%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain%200..1-%20[SlotDefinition],[SlotExpression]++-%20all_members%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20attributes%200..*&gt;[SlotDefinition],[ClassDefinition]-%20defining_slots%200..*&gt;[SlotDefinition],[ClassExpression]++-%20slot_conditions%200..*&gt;[SlotDefinition],[SchemaDefinition]++-%20slots%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20slot_usage%200..*&gt;[SlotDefinition],[ClassDefinition]-%20slots%200..*&gt;[SlotDefinition],[PathExpression]-%20traverse%200..1&gt;[SlotDefinition],[UniqueKey]-%20unique_key_slots%201..*&gt;[SlotDefinition],[SlotDefinition]uses%20-.-&gt;[SlotExpression],[Definition]^-[SlotDefinition],[SchemaDefinition],[PathExpression],[LocalName],[Extension],[Example],[Element],[Definition],[ClassExpression],[ClassDefinition],[AnonymousSlotExpression],[AnonymousClassExpression],[Annotation],[AltDescription]" /></a></p>
+<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotExpression],[SlotDefinition]&lt;apply_to%200..*-%20[SlotDefinition&#124;singular_name:string%20%3F;slot_uri:uriorcurie%20%3F;multivalued:boolean%20%3F;inherited:boolean%20%3F;readonly:string%20%3F;ifabsent:string%20%3F;inlined:boolean%20%3F;inlined_as_list:boolean%20%3F;key:boolean%20%3F;identifier:boolean%20%3F;designates_type:boolean%20%3F;alias:string%20%3F;symmetric:boolean%20%3F;reflexive:boolean%20%3F;locally_reflexive:boolean%20%3F;irreflexive:boolean%20%3F;asymmetric:boolean%20%3F;transitive:boolean%20%3F;is_class_field:boolean%20%3F;role:string%20%3F;is_usage_slot:boolean%20%3F;usage_slot_name:string%20%3F;relational_role:relational_role_enum%20%3F;is_grouping_slot:boolean%20%3F;children_are_mutually_disjoint:boolean%20%3F;required:boolean%20%3F;recommended:boolean%20%3F;minimum_value:integer%20%3F;maximum_value:integer%20%3F;pattern:string%20%3F;equals_string:string%20%3F;equals_string_in:string%20*;equals_number:integer%20%3F;equals_expression:string%20%3F;minimum_cardinality:integer%20%3F;maximum_cardinality:integer%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[SlotDefinition]&lt;mixins%200..*-%20[SlotDefinition],[SlotDefinition]&lt;is_a%200..1-%20[SlotDefinition],[SlotDefinition]&lt;disjoint_with%200..*-%20[SlotDefinition],[PathExpression]&lt;path_rule%200..1-++[SlotDefinition],[SlotDefinition]&lt;slot_group%200..1-%20[SlotDefinition],[SlotDefinition]&lt;reflexive_transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;inverse%200..1-%20[SlotDefinition],[SlotDefinition]&lt;subproperty_of%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain_of%200..*-%20[SlotDefinition],[Definition]&lt;owner%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain%200..1-%20[SlotDefinition],[SlotExpression]++-%20all_members%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20attributes%200..*&gt;[SlotDefinition],[ClassDefinition]-%20defining_slots%200..*&gt;[SlotDefinition],[ClassExpression]++-%20slot_conditions%200..*&gt;[SlotDefinition],[SchemaDefinition]++-%20slots%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20slot_usage%200..*&gt;[SlotDefinition],[ClassDefinition]-%20slots%200..*&gt;[SlotDefinition],[PathExpression]-%20traverse%200..1&gt;[SlotDefinition],[UniqueKey]-%20unique_key_slots%201..*&gt;[SlotDefinition],[SlotDefinition]uses%20-.-&gt;[SlotExpression],[Definition]^-[SlotDefinition],[SchemaDefinition],[PathExpression],[LocalName],[Extension],[Example],[Element],[Definition],[ClassExpression],[ClassDefinition],[AnonymousSlotExpression],[AnonymousClassExpression],[Annotation],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[UniqueKey],[SubsetDefinition],[SlotExpression],[SlotDefinition]&lt;apply_to%200..*-%20[SlotDefinition&#124;singular_name:string%20%3F;slot_uri:uriorcurie%20%3F;multivalued:boolean%20%3F;inherited:boolean%20%3F;readonly:string%20%3F;ifabsent:string%20%3F;inlined:boolean%20%3F;inlined_as_list:boolean%20%3F;key:boolean%20%3F;identifier:boolean%20%3F;designates_type:boolean%20%3F;alias:string%20%3F;symmetric:boolean%20%3F;reflexive:boolean%20%3F;locally_reflexive:boolean%20%3F;irreflexive:boolean%20%3F;asymmetric:boolean%20%3F;transitive:boolean%20%3F;is_class_field:boolean%20%3F;role:string%20%3F;is_usage_slot:boolean%20%3F;usage_slot_name:string%20%3F;relational_role:relational_role_enum%20%3F;is_grouping_slot:boolean%20%3F;children_are_mutually_disjoint:boolean%20%3F;required:boolean%20%3F;recommended:boolean%20%3F;minimum_value:integer%20%3F;maximum_value:integer%20%3F;pattern:string%20%3F;equals_string:string%20%3F;equals_string_in:string%20*;equals_number:integer%20%3F;equals_expression:string%20%3F;minimum_cardinality:integer%20%3F;maximum_cardinality:integer%20%3F;abstract(i):boolean%20%3F;mixin(i):boolean%20%3F;values_from(i):uriorcurie%20*;created_by(i):uriorcurie%20%3F;created_on(i):datetime%20%3F;last_updated_on(i):datetime%20%3F;modified_by(i):uriorcurie%20%3F;status(i):uriorcurie%20%3F;string_serialization(i):string%20%3F;name(i):string;id_prefixes(i):ncname%20*;definition_uri(i):uriorcurie%20%3F;aliases(i):string%20*;conforms_to(i):string%20%3F;mappings(i):uriorcurie%20*;exact_mappings(i):uriorcurie%20*;close_mappings(i):uriorcurie%20*;related_mappings(i):uriorcurie%20*;narrow_mappings(i):uriorcurie%20*;broad_mappings(i):uriorcurie%20*;precedence(i):integer%20%3F;description(i):string%20%3F;title(i):string%20%3F;deprecated(i):string%20%3F;todos(i):string%20*;notes(i):string%20*;comments(i):string%20*;from_schema(i):uri%20%3F;imported_from(i):string%20%3F;source(i):uriorcurie%20%3F;see_also(i):uriorcurie%20*;deprecated_element_has_exact_replacement(i):uriorcurie%20%3F;deprecated_element_has_possible_replacement(i):uriorcurie%20%3F],[SlotDefinition]&lt;mixins%200..*-%20[SlotDefinition],[SlotDefinition]&lt;is_a%200..1-%20[SlotDefinition],[SlotDefinition]&lt;disjoint_with%200..*-%20[SlotDefinition],[PathExpression]&lt;path_rule%200..1-++[SlotDefinition],[SlotDefinition]&lt;slot_group%200..1-%20[SlotDefinition],[SlotDefinition]&lt;reflexive_transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;transitive_form_of%200..1-%20[SlotDefinition],[SlotDefinition]&lt;inverse%200..1-%20[SlotDefinition],[SlotDefinition]&lt;subproperty_of%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain_of%200..*-%20[SlotDefinition],[Definition]&lt;owner%200..1-%20[SlotDefinition],[ClassDefinition]&lt;domain%200..1-%20[SlotDefinition],[SlotExpression]++-%20all_members%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20attributes%200..*&gt;[SlotDefinition],[ClassDefinition]-%20defining_slots%200..*&gt;[SlotDefinition],[ClassExpression]++-%20slot_conditions%200..*&gt;[SlotDefinition],[SchemaDefinition]++-%20slots%200..*&gt;[SlotDefinition],[ClassDefinition]++-%20slot_usage%200..*&gt;[SlotDefinition],[ClassDefinition]-%20slots%200..*&gt;[SlotDefinition],[PathExpression]-%20traverse%200..1&gt;[SlotDefinition],[UniqueKey]-%20unique_key_slots%201..*&gt;[SlotDefinition],[SlotDefinition]uses%20-.-&gt;[SlotExpression],[Definition]^-[SlotDefinition],[SchemaDefinition],[PathExpression],[LocalName],[Extension],[Example],[Element],[Definition],[ClassExpression],[ClassDefinition],[AnonymousSlotExpression],[AnonymousClassExpression],[Annotation],[AltDescription]" /></a></p>
 <h2 id="parents">Parents</h2>
 <ul>
 <li>is_a: <a href="../Definition/">Definition</a> - base class for definitions</li>
@@ -120,6 +120,7 @@ <h2 id="referenced-by-class">Referenced by Class</h2>
 <li><strong>None</strong> <em><a href="../reflexive_transitive_form_of/">reflexive_transitive_form_of</a></em>  <sub>0..1</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
 <li><strong>None</strong> <em><a href="../slot_conditions/">slot_conditions</a></em>  <sub>0..*</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
 <li><strong><a href="./">SlotDefinition</a></strong> <em><a href="../slot_definition_apply_to/">slot_definition➞apply_to</a></em>  <sub>0..*</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
+<li><strong><a href="./">SlotDefinition</a></strong> <em><a href="../slot_definition_disjoint_with/">slot_definition➞disjoint_with</a></em>  <sub>0..*</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
 <li><strong><a href="./">SlotDefinition</a></strong> <em><a href="../slot_definition_is_a/">slot_definition➞is_a</a></em>  <sub>0..1</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
 <li><strong><a href="./">SlotDefinition</a></strong> <em><a href="../slot_definition_mixins/">slot_definition➞mixins</a></em>  <sub>0..*</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
 <li><strong><a href="../SchemaDefinition/">SchemaDefinition</a></strong> <em><a href="../slot_definitions/">schema_definition➞slots</a></em>  <sub>0..*</sub>  <strong><a href="./">SlotDefinition</a></strong></li>
@@ -321,6 +322,16 @@ <h3 id="own">Own</h3>
 <li>Range: <a href="../PathExpression/">PathExpression</a></li>
 </ul>
 </li>
+<li><a href="../slot_definition_disjoint_with/">slot_definition➞disjoint_with</a>  <sub>0..*</sub><ul>
+<li>Description: Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances</li>
+<li>Range: <a href="./">SlotDefinition</a></li>
+</ul>
+</li>
+<li><a href="../children_are_mutually_disjoint/">children_are_mutually_disjoint</a>  <sub>0..1</sub><ul>
+<li>Description: If true then all direct is_a children are mutually disjoint and share no instances in common</li>
+<li>Range: <a href="../Boolean/">Boolean</a></li>
+</ul>
+</li>
 <li><a href="../slot_definition_is_a/">slot_definition➞is_a</a>  <sub>0..1</sub><ul>
 <li>Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded</li>
 <li>Range: <a href="./">SlotDefinition</a></li>
diff --git a/docs/UniqueKey/index.html b/docs/UniqueKey/index.html
index 8f9d49ff..63ef6cf4 100644
--- a/docs/UniqueKey/index.html
+++ b/docs/UniqueKey/index.html
@@ -102,7 +102,7 @@
                 <h1 id="class-unique_key">Class: unique_key</h1>
 <p>a collection of slots whose values uniquely identify an instance of a class</p>
 <p>URI: <a href="https://w3id.org/linkml/UniqueKey">linkml:UniqueKey</a></p>
-<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[SlotDefinition]&lt;unique_key_slots%201..*-%20[UniqueKey&#124;description:string%20%3F;title:string%20%3F;deprecated:string%20%3F;todos:string%20*;notes:string%20*;comments:string%20*;from_schema:uri%20%3F;imported_from:string%20%3F;source:uriorcurie%20%3F;see_also:uriorcurie%20*;deprecated_element_has_exact_replacement:uriorcurie%20%3F;deprecated_element_has_possible_replacement:uriorcurie%20%3F],[ClassDefinition]++-%20unique_keys%200..*&gt;[UniqueKey],[UniqueKey]uses%20-.-&gt;[Extensible],[UniqueKey]uses%20-.-&gt;[Annotatable],[UniqueKey]uses%20-.-&gt;[CommonMetadata],[SubsetDefinition],[SlotDefinition],[Extension],[Extensible],[Example],[CommonMetadata],[ClassDefinition],[Annotation],[Annotatable],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[SlotDefinition]&lt;unique_key_slots%201..*-%20[UniqueKey&#124;description:string%20%3F;title:string%20%3F;deprecated:string%20%3F;todos:string%20*;notes:string%20*;comments:string%20*;from_schema:uri%20%3F;imported_from:string%20%3F;source:uriorcurie%20%3F;see_also:uriorcurie%20*;deprecated_element_has_exact_replacement:uriorcurie%20%3F;deprecated_element_has_possible_replacement:uriorcurie%20%3F],[ClassDefinition]++-%20unique_keys%200..*&gt;[UniqueKey],[UniqueKey]uses%20-.-&gt;[Extensible],[UniqueKey]uses%20-.-&gt;[Annotatable],[UniqueKey]uses%20-.-&gt;[CommonMetadata],[SubsetDefinition],[SlotDefinition],[Extension],[Extensible],[Example],[CommonMetadata],[ClassDefinition],[Annotation],[Annotatable],[AltDescription]" /></a></p>
+<p><a href="https://yuml.me/diagram/nofunky;dir:TB/class/[SlotDefinition]&lt;unique_key_slots%201..*-%20[UniqueKey&#124;unique_key_name(pk):string;description:string%20%3F;title:string%20%3F;deprecated:string%20%3F;todos:string%20*;notes:string%20*;comments:string%20*;from_schema:uri%20%3F;imported_from:string%20%3F;source:uriorcurie%20%3F;see_also:uriorcurie%20*;deprecated_element_has_exact_replacement:uriorcurie%20%3F;deprecated_element_has_possible_replacement:uriorcurie%20%3F],[ClassDefinition]++-%20unique_keys%200..*&gt;[UniqueKey],[UniqueKey]uses%20-.-&gt;[Extensible],[UniqueKey]uses%20-.-&gt;[Annotatable],[UniqueKey]uses%20-.-&gt;[CommonMetadata],[SubsetDefinition],[SlotDefinition],[Extension],[Extensible],[Example],[CommonMetadata],[ClassDefinition],[Annotation],[Annotatable],[AltDescription]"><img alt="img" src="https://yuml.me/diagram/nofunky;dir:TB/class/[SlotDefinition]&lt;unique_key_slots%201..*-%20[UniqueKey&#124;unique_key_name(pk):string;description:string%20%3F;title:string%20%3F;deprecated:string%20%3F;todos:string%20*;notes:string%20*;comments:string%20*;from_schema:uri%20%3F;imported_from:string%20%3F;source:uriorcurie%20%3F;see_also:uriorcurie%20*;deprecated_element_has_exact_replacement:uriorcurie%20%3F;deprecated_element_has_possible_replacement:uriorcurie%20%3F],[ClassDefinition]++-%20unique_keys%200..*&gt;[UniqueKey],[UniqueKey]uses%20-.-&gt;[Extensible],[UniqueKey]uses%20-.-&gt;[Annotatable],[UniqueKey]uses%20-.-&gt;[CommonMetadata],[SubsetDefinition],[SlotDefinition],[Extension],[Extensible],[Example],[CommonMetadata],[ClassDefinition],[Annotation],[Annotatable],[AltDescription]" /></a></p>
 <h2 id="uses-mixin">Uses Mixin</h2>
 <ul>
 <li>mixin: <a href="../Extensible/">Extensible</a> - mixin for classes that support extension</li>
@@ -116,6 +116,11 @@ <h2 id="referenced-by-class">Referenced by Class</h2>
 <h2 id="attributes">Attributes</h2>
 <h3 id="own">Own</h3>
 <ul>
+<li><a href="../unique_key_name/">unique_key_name</a>  <sub>1..1</sub><ul>
+<li>Description: name of the unique key</li>
+<li>Range: <a href="../String/">String</a></li>
+</ul>
+</li>
 <li><a href="../unique_key_slots/">unique_key_slots</a>  <sub>1..*</sub><ul>
 <li>Description: list of slot names that form a key</li>
 <li>Range: <a href="../SlotDefinition/">SlotDefinition</a></li>
diff --git a/docs/aliases/index.html b/docs/aliases/index.html
index 4e20e7d2..9799941b 100644
--- a/docs/aliases/index.html
+++ b/docs/aliases/index.html
@@ -127,6 +127,26 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>synonyms</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>alternate names</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>alternative labels</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>designations</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>skos:altLabel</td>
diff --git a/docs/alt_descriptions/index.html b/docs/alt_descriptions/index.html
index cde36bad..08196888 100644
--- a/docs/alt_descriptions/index.html
+++ b/docs/alt_descriptions/index.html
@@ -124,6 +124,23 @@ <h2 id="used-by">Used by</h2>
 <li><a href="../TypeDefinition/">TypeDefinition</a></li>
 <li><a href="../UniqueKey/">UniqueKey</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>alternate definitions</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/asymmetric/index.html b/docs/asymmetric/index.html
index a3369c62..09ebc987 100644
--- a/docs/asymmetric/index.html
+++ b/docs/asymmetric/index.html
@@ -128,6 +128,11 @@ <h2 id="other-properties">Other properties</h2>
 <td></td>
 <td>asymmetry is the combination of antisymmetry and irreflexivity</td>
 </tr>
+<tr>
+<td><strong>Close Mappings:</strong></td>
+<td></td>
+<td>owl:AsymmetricProperty</td>
+</tr>
 </tbody>
 </table>
               
diff --git a/docs/children_are_mutually_disjoint/index.html b/docs/children_are_mutually_disjoint/index.html
new file mode 100644
index 00000000..598b4d59
--- /dev/null
+++ b/docs/children_are_mutually_disjoint/index.html
@@ -0,0 +1,155 @@
+<!DOCTYPE html>
+<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
+<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1.0">
+  
+  
+  
+  <link rel="shortcut icon" href="../img/favicon.ico">
+  <title>Slot: children_are_mutually_disjoint - LinkML Model</title>
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato:400,700|Roboto+Slab:400,700|Inconsolata:400,700" />
+
+  <link rel="stylesheet" href="../css/theme.css" />
+  <link rel="stylesheet" href="../css/theme_extra.css" />
+  <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/styles/github.min.css" />
+  
+  <script>
+    // Current page data
+    var mkdocs_page_name = "Slot: children_are_mutually_disjoint";
+    var mkdocs_page_input_path = "children_are_mutually_disjoint.md";
+    var mkdocs_page_url = null;
+  </script>
+  
+  <script src="../js/jquery-2.1.1.min.js" defer></script>
+  <script src="../js/modernizr-2.8.3.min.js" defer></script>
+  <script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/highlight.min.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script> 
+  <script async src="https://www.googletagmanager.com/gtag/js?id=G-2SYBSJVZ23"></script>
+  <script>
+    window.dataLayer = window.dataLayer || [];
+    function gtag(){dataLayer.push(arguments);}
+    gtag('js', new Date());
+
+    gtag('config', 'G-2SYBSJVZ23');
+  </script>
+</head>
+
+<body class="wy-body-for-nav" role="document">
+
+  <div class="wy-grid-for-nav">
+
+    
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side stickynav">
+    <div class="wy-side-scroll">
+      <div class="wy-side-nav-search">
+        <a href=".." class="icon icon-home"> LinkML Model</a>
+        <div role="search">
+  <form id ="rtd-search-form" class="wy-form" action="../search.html" method="get">
+      <input type="text" name="q" placeholder="Search docs" title="Type search term here" />
+  </form>
+</div>
+      </div>
+
+      <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../home/">Home</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="..">Index</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../credits/">Credits</a>
+                    </li>
+                </ul>
+      </div>
+    </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap">
+
+      
+      <nav class="wy-nav-top" role="navigation" aria-label="top navigation">
+        <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+        <a href="..">LinkML Model</a>
+      </nav>
+
+      
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="breadcrumbs navigation">
+  <ul class="wy-breadcrumbs">
+    <li><a href="..">Docs</a> &raquo;</li>
+    
+      
+    
+    <li>Slot: children_are_mutually_disjoint</li>
+    <li class="wy-breadcrumbs-aside">
+      
+    </li>
+  </ul>
+  
+  <hr/>
+</div>
+
+          <div role="main">
+            <div class="section">
+              
+                <h1 id="slot-children_are_mutually_disjoint">Slot: children_are_mutually_disjoint</h1>
+<p>If true then all direct is_a children are mutually disjoint and share no instances in common</p>
+<p>URI: <a href="https://w3id.org/linkml/children_are_mutually_disjoint">linkml:children_are_mutually_disjoint</a></p>
+<h2 id="domain-and-range">Domain and Range</h2>
+<p><a href="../Definition/">Definition</a> &#8594;  <sub>0..1</sub> <a href="../Boolean/">Boolean</a></p>
+<h2 id="parents">Parents</h2>
+<h2 id="children">Children</h2>
+<h2 id="used-by">Used by</h2>
+<ul>
+<li><a href="../ClassDefinition/">ClassDefinition</a></li>
+<li><a href="../SlotDefinition/">SlotDefinition</a></li>
+</ul>
+              
+            </div>
+          </div>
+          <footer>
+  
+
+  <hr/>
+
+  <div role="contentinfo">
+    <!-- Copyright etc -->
+    
+  </div>
+
+  Built with <a href="https://www.mkdocs.org/">MkDocs</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
+</footer>
+      
+        </div>
+      </div>
+
+    </section>
+
+  </div>
+
+  <div class="rst-versions" role="note" aria-label="versions">
+  <span class="rst-current-version" data-toggle="rst-current-version">
+    
+    
+    
+  </span>
+</div>
+    <script>var base_url = '..';</script>
+    <script src="../js/theme_extra.js" defer></script>
+    <script src="../js/theme.js" defer></script>
+      <script src="../search/main.js" defer></script>
+    <script defer>
+        window.onload = function () {
+            SphinxRtdTheme.Navigation.enable(true);
+        };
+    </script>
+
+</body>
+</html>
diff --git a/docs/class_definition_disjoint_with/index.html b/docs/class_definition_disjoint_with/index.html
new file mode 100644
index 00000000..9c349b74
--- /dev/null
+++ b/docs/class_definition_disjoint_with/index.html
@@ -0,0 +1,157 @@
+<!DOCTYPE html>
+<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
+<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1.0">
+  
+  
+  
+  <link rel="shortcut icon" href="../img/favicon.ico">
+  <title>Slot: disjoint_with - LinkML Model</title>
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato:400,700|Roboto+Slab:400,700|Inconsolata:400,700" />
+
+  <link rel="stylesheet" href="../css/theme.css" />
+  <link rel="stylesheet" href="../css/theme_extra.css" />
+  <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/styles/github.min.css" />
+  
+  <script>
+    // Current page data
+    var mkdocs_page_name = "Slot: disjoint_with";
+    var mkdocs_page_input_path = "class_definition_disjoint_with.md";
+    var mkdocs_page_url = null;
+  </script>
+  
+  <script src="../js/jquery-2.1.1.min.js" defer></script>
+  <script src="../js/modernizr-2.8.3.min.js" defer></script>
+  <script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/highlight.min.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script> 
+  <script async src="https://www.googletagmanager.com/gtag/js?id=G-2SYBSJVZ23"></script>
+  <script>
+    window.dataLayer = window.dataLayer || [];
+    function gtag(){dataLayer.push(arguments);}
+    gtag('js', new Date());
+
+    gtag('config', 'G-2SYBSJVZ23');
+  </script>
+</head>
+
+<body class="wy-body-for-nav" role="document">
+
+  <div class="wy-grid-for-nav">
+
+    
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side stickynav">
+    <div class="wy-side-scroll">
+      <div class="wy-side-nav-search">
+        <a href=".." class="icon icon-home"> LinkML Model</a>
+        <div role="search">
+  <form id ="rtd-search-form" class="wy-form" action="../search.html" method="get">
+      <input type="text" name="q" placeholder="Search docs" title="Type search term here" />
+  </form>
+</div>
+      </div>
+
+      <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../home/">Home</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="..">Index</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../credits/">Credits</a>
+                    </li>
+                </ul>
+      </div>
+    </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap">
+
+      
+      <nav class="wy-nav-top" role="navigation" aria-label="top navigation">
+        <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+        <a href="..">LinkML Model</a>
+      </nav>
+
+      
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="breadcrumbs navigation">
+  <ul class="wy-breadcrumbs">
+    <li><a href="..">Docs</a> &raquo;</li>
+    
+      
+    
+    <li>Slot: disjoint_with</li>
+    <li class="wy-breadcrumbs-aside">
+      
+    </li>
+  </ul>
+  
+  <hr/>
+</div>
+
+          <div role="main">
+            <div class="section">
+              
+                <h1 id="slot-disjoint_with">Slot: disjoint_with</h1>
+<p>Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances</p>
+<p>URI: <a href="https://w3id.org/linkml/class_definition_disjoint_with">linkml:class_definition_disjoint_with</a></p>
+<h2 id="domain-and-range">Domain and Range</h2>
+<p><a href="../ClassDefinition/">ClassDefinition</a> &#8594;  <sub>0..*</sub> <a href="../ClassDefinition/">ClassDefinition</a></p>
+<h2 id="parents">Parents</h2>
+<ul>
+<li>is_a: <a href="../disjoint_with/">disjoint_with</a></li>
+</ul>
+<h2 id="children">Children</h2>
+<h2 id="used-by">Used by</h2>
+<ul>
+<li><a href="../ClassDefinition/">ClassDefinition</a></li>
+</ul>
+              
+            </div>
+          </div>
+          <footer>
+  
+
+  <hr/>
+
+  <div role="contentinfo">
+    <!-- Copyright etc -->
+    
+  </div>
+
+  Built with <a href="https://www.mkdocs.org/">MkDocs</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
+</footer>
+      
+        </div>
+      </div>
+
+    </section>
+
+  </div>
+
+  <div class="rst-versions" role="note" aria-label="versions">
+  <span class="rst-current-version" data-toggle="rst-current-version">
+    
+    
+    
+  </span>
+</div>
+    <script>var base_url = '..';</script>
+    <script src="../js/theme_extra.js" defer></script>
+    <script src="../js/theme.js" defer></script>
+      <script src="../search/main.js" defer></script>
+    <script defer>
+        window.onload = function () {
+            SphinxRtdTheme.Navigation.enable(true);
+        };
+    </script>
+
+</body>
+</html>
diff --git a/docs/class_uri/index.html b/docs/class_uri/index.html
index 8f1c8162..d32c1c6a 100644
--- a/docs/class_uri/index.html
+++ b/docs/class_uri/index.html
@@ -110,6 +110,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../ClassDefinition/">ClassDefinition</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>public ID</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/description/index.html b/docs/description/index.html
index 4822e66a..e2696319 100644
--- a/docs/description/index.html
+++ b/docs/description/index.html
@@ -136,6 +136,11 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>definition</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>skos:definition</td>
diff --git a/docs/disjoint_with/index.html b/docs/disjoint_with/index.html
new file mode 100644
index 00000000..ae702107
--- /dev/null
+++ b/docs/disjoint_with/index.html
@@ -0,0 +1,155 @@
+<!DOCTYPE html>
+<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
+<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1.0">
+  
+  
+  
+  <link rel="shortcut icon" href="../img/favicon.ico">
+  <title>Slot: disjoint_with - LinkML Model</title>
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato:400,700|Roboto+Slab:400,700|Inconsolata:400,700" />
+
+  <link rel="stylesheet" href="../css/theme.css" />
+  <link rel="stylesheet" href="../css/theme_extra.css" />
+  <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/styles/github.min.css" />
+  
+  <script>
+    // Current page data
+    var mkdocs_page_name = "Slot: disjoint_with";
+    var mkdocs_page_input_path = "disjoint_with.md";
+    var mkdocs_page_url = null;
+  </script>
+  
+  <script src="../js/jquery-2.1.1.min.js" defer></script>
+  <script src="../js/modernizr-2.8.3.min.js" defer></script>
+  <script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/highlight.min.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script> 
+  <script async src="https://www.googletagmanager.com/gtag/js?id=G-2SYBSJVZ23"></script>
+  <script>
+    window.dataLayer = window.dataLayer || [];
+    function gtag(){dataLayer.push(arguments);}
+    gtag('js', new Date());
+
+    gtag('config', 'G-2SYBSJVZ23');
+  </script>
+</head>
+
+<body class="wy-body-for-nav" role="document">
+
+  <div class="wy-grid-for-nav">
+
+    
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side stickynav">
+    <div class="wy-side-scroll">
+      <div class="wy-side-nav-search">
+        <a href=".." class="icon icon-home"> LinkML Model</a>
+        <div role="search">
+  <form id ="rtd-search-form" class="wy-form" action="../search.html" method="get">
+      <input type="text" name="q" placeholder="Search docs" title="Type search term here" />
+  </form>
+</div>
+      </div>
+
+      <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../home/">Home</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="..">Index</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../credits/">Credits</a>
+                    </li>
+                </ul>
+      </div>
+    </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap">
+
+      
+      <nav class="wy-nav-top" role="navigation" aria-label="top navigation">
+        <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+        <a href="..">LinkML Model</a>
+      </nav>
+
+      
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="breadcrumbs navigation">
+  <ul class="wy-breadcrumbs">
+    <li><a href="..">Docs</a> &raquo;</li>
+    
+      
+    
+    <li>Slot: disjoint_with</li>
+    <li class="wy-breadcrumbs-aside">
+      
+    </li>
+  </ul>
+  
+  <hr/>
+</div>
+
+          <div role="main">
+            <div class="section">
+              
+                <h1 id="slot-disjoint_with">Slot: disjoint_with</h1>
+<p>Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances</p>
+<p>URI: <a href="https://w3id.org/linkml/disjoint_with">linkml:disjoint_with</a></p>
+<h2 id="domain-and-range">Domain and Range</h2>
+<p><a href="../Definition/">Definition</a> &#8594;  <sub>0..*</sub> <a href="../Definition/">Definition</a></p>
+<h2 id="parents">Parents</h2>
+<h2 id="children">Children</h2>
+<ul>
+<li><a href="../class_definition_disjoint_with/">class_definition➞disjoint_with</a></li>
+<li><a href="../slot_definition_disjoint_with/">slot_definition➞disjoint_with</a></li>
+</ul>
+<h2 id="used-by">Used by</h2>
+              
+            </div>
+          </div>
+          <footer>
+  
+
+  <hr/>
+
+  <div role="contentinfo">
+    <!-- Copyright etc -->
+    
+  </div>
+
+  Built with <a href="https://www.mkdocs.org/">MkDocs</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
+</footer>
+      
+        </div>
+      </div>
+
+    </section>
+
+  </div>
+
+  <div class="rst-versions" role="note" aria-label="versions">
+  <span class="rst-current-version" data-toggle="rst-current-version">
+    
+    
+    
+  </span>
+</div>
+    <script>var base_url = '..';</script>
+    <script src="../js/theme_extra.js" defer></script>
+    <script src="../js/theme.js" defer></script>
+      <script src="../search/main.js" defer></script>
+    <script defer>
+        window.onload = function () {
+            SphinxRtdTheme.Navigation.enable(true);
+        };
+    </script>
+
+</body>
+</html>
diff --git a/docs/index.html b/docs/index.html
index e3a083e4..fe635ff4 100644
--- a/docs/index.html
+++ b/docs/index.html
@@ -218,6 +218,7 @@ <h3 id="slots">Slots</h3>
 </li>
 </ul>
 </li>
+<li><a href="children_are_mutually_disjoint/">children_are_mutually_disjoint</a> - If true then all direct is_a children are mutually disjoint and share no instances in common</li>
 <li><a href="class_uri/">class_uri</a> - URI of the class in an RDF environment</li>
 <li><a href="classes/">classes</a> - class definitions</li>
 <li><a href="classification_rules/">classification_rules</a> - the collection of classification rules that apply to all members of this class</li>
@@ -239,6 +240,11 @@ <h3 id="slots">Slots</h3>
 <li><a href="deprecated_element_has_possible_replacement/">deprecated element has possible replacement</a> - When an element is deprecated, it can be potentially replaced by this uri or curie</li>
 <li><a href="description/">description</a> - a description of the element's purpose and use</li>
 <li><a href="designates_type/">designates_type</a> - True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition</li>
+<li><a href="disjoint_with/">disjoint_with</a> - Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances<ul>
+<li><a href="class_definition_disjoint_with/">class_definition➞disjoint_with</a></li>
+<li><a href="slot_definition_disjoint_with/">slot_definition➞disjoint_with</a></li>
+</ul>
+</li>
 <li><a href="domain/">domain</a> - defines the type of the subject of the slot.  Given the following slot definition</li>
 <li><a href="domain_of/">domain_of</a> - the class(es) that reference the slot in a "slots" or "slot_usage" context</li>
 <li><a href="elseconditions/">elseconditions</a> - an expression that must hold for an instance of the class, if the preconditions no not hold</li>
@@ -317,6 +323,7 @@ <h3 id="slots">Slots</h3>
 </li>
 <li><a href="notes/">notes</a> - editorial notes about an element intended for internal consumption</li>
 <li><a href="open_world/">open_world</a> - if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these</li>
+<li><a href="owned_by/">owned_by</a> - agent that owns or is the steward of the element</li>
 <li><a href="owner/">owner</a> - the "owner" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot</li>
 <li><a href="path_rule/">path_rule</a> - a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts</li>
 <li><a href="pattern/">pattern</a> - the string value of the slot must conform to this regular expression</li>
@@ -382,6 +389,7 @@ <h3 id="slots">Slots</h3>
 <li><a href="typeof/">typeof</a> - Names a parent type</li>
 <li><a href="types/">types</a> - data types used in the model</li>
 <li><a href="union_of/">union_of</a> - indicates that the domain class consists exactly of the members of the classes in the range</li>
+<li><a href="unique_key_name/">unique_key_name</a> - name of the unique key</li>
 <li><a href="unique_key_slots/">unique_key_slots</a> - list of slot names that form a key</li>
 <li><a href="unique_keys/">unique_keys</a> - Set of unique keys for this slot</li>
 <li><a href="usage_slot_name/">usage_slot_name</a> - The name of the slot referenced in the slot_usage</li>
@@ -501,5 +509,5 @@ <h4 id="defined">Defined</h4>
 
 <!--
 MkDocs version : 1.2.3
-Build Date UTC : 2021-12-28 23:38:28.775680+00:00
+Build Date UTC : 2022-01-22 01:09:01.877753+00:00
 -->
diff --git a/docs/irreflexive/index.html b/docs/irreflexive/index.html
index af4309f5..b15a3704 100644
--- a/docs/irreflexive/index.html
+++ b/docs/irreflexive/index.html
@@ -113,6 +113,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../SlotDefinition/">SlotDefinition</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Close Mappings:</strong></td>
+<td></td>
+<td>owl:IrreflexiveProperty</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/mappings/index.html b/docs/mappings/index.html
index 79c0be76..c6960471 100644
--- a/docs/mappings/index.html
+++ b/docs/mappings/index.html
@@ -135,6 +135,26 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>xrefs</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>identifiers</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>alternate identifiers</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>alternate ids</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>skos:mappingRelation</td>
diff --git a/docs/maximum_value/index.html b/docs/maximum_value/index.html
index d1041aac..48b97387 100644
--- a/docs/maximum_value/index.html
+++ b/docs/maximum_value/index.html
@@ -115,6 +115,23 @@ <h2 id="used-by">Used by</h2>
 <li><a href="../TypeDefinition/">TypeDefinition</a></li>
 <li><a href="../TypeExpression/">TypeExpression</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>high value</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/meaning/index.html b/docs/meaning/index.html
index e42ff451..cb090651 100644
--- a/docs/meaning/index.html
+++ b/docs/meaning/index.html
@@ -110,6 +110,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../PermissibleValue/">PermissibleValue</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>PV meaning</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/minimum_value/index.html b/docs/minimum_value/index.html
index 04b28fde..f8276ecc 100644
--- a/docs/minimum_value/index.html
+++ b/docs/minimum_value/index.html
@@ -115,6 +115,23 @@ <h2 id="used-by">Used by</h2>
 <li><a href="../TypeDefinition/">TypeDefinition</a></li>
 <li><a href="../TypeExpression/">TypeExpression</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>low value</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/name/index.html b/docs/name/index.html
index ceb0f7d4..3453f1ce 100644
--- a/docs/name/index.html
+++ b/docs/name/index.html
@@ -130,6 +130,16 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>short name</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>unique name</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>rdfs:label</td>
diff --git a/docs/owned_by/index.html b/docs/owned_by/index.html
new file mode 100644
index 00000000..62dab4ac
--- /dev/null
+++ b/docs/owned_by/index.html
@@ -0,0 +1,178 @@
+<!DOCTYPE html>
+<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
+<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1.0">
+  
+  
+  
+  <link rel="shortcut icon" href="../img/favicon.ico">
+  <title>Slot: owned_by - LinkML Model</title>
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato:400,700|Roboto+Slab:400,700|Inconsolata:400,700" />
+
+  <link rel="stylesheet" href="../css/theme.css" />
+  <link rel="stylesheet" href="../css/theme_extra.css" />
+  <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/styles/github.min.css" />
+  
+  <script>
+    // Current page data
+    var mkdocs_page_name = "Slot: owned_by";
+    var mkdocs_page_input_path = "owned_by.md";
+    var mkdocs_page_url = null;
+  </script>
+  
+  <script src="../js/jquery-2.1.1.min.js" defer></script>
+  <script src="../js/modernizr-2.8.3.min.js" defer></script>
+  <script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/highlight.min.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script> 
+  <script async src="https://www.googletagmanager.com/gtag/js?id=G-2SYBSJVZ23"></script>
+  <script>
+    window.dataLayer = window.dataLayer || [];
+    function gtag(){dataLayer.push(arguments);}
+    gtag('js', new Date());
+
+    gtag('config', 'G-2SYBSJVZ23');
+  </script>
+</head>
+
+<body class="wy-body-for-nav" role="document">
+
+  <div class="wy-grid-for-nav">
+
+    
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side stickynav">
+    <div class="wy-side-scroll">
+      <div class="wy-side-nav-search">
+        <a href=".." class="icon icon-home"> LinkML Model</a>
+        <div role="search">
+  <form id ="rtd-search-form" class="wy-form" action="../search.html" method="get">
+      <input type="text" name="q" placeholder="Search docs" title="Type search term here" />
+  </form>
+</div>
+      </div>
+
+      <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../home/">Home</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="..">Index</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../credits/">Credits</a>
+                    </li>
+                </ul>
+      </div>
+    </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap">
+
+      
+      <nav class="wy-nav-top" role="navigation" aria-label="top navigation">
+        <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+        <a href="..">LinkML Model</a>
+      </nav>
+
+      
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="breadcrumbs navigation">
+  <ul class="wy-breadcrumbs">
+    <li><a href="..">Docs</a> &raquo;</li>
+    
+      
+    
+    <li>Slot: owned_by</li>
+    <li class="wy-breadcrumbs-aside">
+      
+    </li>
+  </ul>
+  
+  <hr/>
+</div>
+
+          <div role="main">
+            <div class="section">
+              
+                <h1 id="slot-owned_by">Slot: owned_by</h1>
+<p>agent that owns or is the steward of the element</p>
+<p>URI: <a href="https://w3id.org/linkml/owned_by">linkml:owned_by</a></p>
+<h2 id="domain-and-range">Domain and Range</h2>
+<p><a href="../Element/">Element</a> &#8594;  <sub>0..1</sub> <a href="../Uriorcurie/">Uriorcurie</a></p>
+<h2 id="parents">Parents</h2>
+<h2 id="children">Children</h2>
+<h2 id="used-by">Used by</h2>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>steward</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>owner</td>
+</tr>
+<tr>
+<td><strong>Close Mappings:</strong></td>
+<td></td>
+<td>rdfs:isDefinedBy</td>
+</tr>
+</tbody>
+</table>
+              
+            </div>
+          </div>
+          <footer>
+  
+
+  <hr/>
+
+  <div role="contentinfo">
+    <!-- Copyright etc -->
+    
+  </div>
+
+  Built with <a href="https://www.mkdocs.org/">MkDocs</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
+</footer>
+      
+        </div>
+      </div>
+
+    </section>
+
+  </div>
+
+  <div class="rst-versions" role="note" aria-label="versions">
+  <span class="rst-current-version" data-toggle="rst-current-version">
+    
+    
+    
+  </span>
+</div>
+    <script>var base_url = '..';</script>
+    <script src="../js/theme_extra.js" defer></script>
+    <script src="../js/theme.js" defer></script>
+      <script src="../search/main.js" defer></script>
+    <script defer>
+        window.onload = function () {
+            SphinxRtdTheme.Navigation.enable(true);
+        };
+    </script>
+
+</body>
+</html>
diff --git a/docs/range/index.html b/docs/range/index.html
index cb0694e7..2f8be28c 100644
--- a/docs/range/index.html
+++ b/docs/range/index.html
@@ -130,6 +130,11 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>value domain</td>
+</tr>
+<tr>
 <td><strong>Comments:</strong></td>
 <td></td>
 <td>range is underspecified, as not all elements can appear as the range of a slot.</td>
diff --git a/docs/reflexive/index.html b/docs/reflexive/index.html
index ed2947a4..39db6e2e 100644
--- a/docs/reflexive/index.html
+++ b/docs/reflexive/index.html
@@ -128,6 +128,11 @@ <h2 id="other-properties">Other properties</h2>
 <td></td>
 <td>it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive</td>
 </tr>
+<tr>
+<td><strong>Close Mappings:</strong></td>
+<td></td>
+<td>owl:ReflexiveProperty</td>
+</tr>
 </tbody>
 </table>
               
diff --git a/docs/schema_definition_name/index.html b/docs/schema_definition_name/index.html
index c83429d2..8e14622f 100644
--- a/docs/schema_definition_name/index.html
+++ b/docs/schema_definition_name/index.html
@@ -124,6 +124,16 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>short name</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>unique name</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>rdfs:label</td>
diff --git a/docs/search/search_index.json b/docs/search/search_index.json
index 381f979c..98186d9f 100644
--- a/docs/search/search_index.json
+++ b/docs/search/search_index.json
@@ -1 +1 @@
-{"config":{"indexing":"full","lang":["en"],"min_search_length":3,"prebuild_index":false,"separator":"[\\s\\-]+"},"docs":[{"location":"","text":"meta schema A metamodel for defining linked open data schemas Classes AltDescription - an attributed description AnonymousExpression AnonymousClassExpression AnonymousSlotExpression AnonymousTypeExpression ClassLevelRule - A rule that is applied to classes ClassRule - A rule that applies to instances of a class Element - a named element in the model Definition - base class for definitions ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition. Example - usage example and description Extension - a tag/value pair used to add non-model information to an entry Annotation - a tag/value pair with the semantics of OWL Annotation LocalName - an attributed label PathExpression - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue - a permissible value, accompanied by intended text and an optional mapping to a concept URI Prefix - prefix URI tuple UniqueKey - a collection of slots whose values uniquely identify an instance of a class Mixins Annotatable - mixin for classes that support annotations ClassExpression - A boolean expression that can be used to dynamically determine membership of a class CommonMetadata - Generic metadata shared across definitions Expression - general mixin for any class that can represent some form of expression SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Extensible - mixin for classes that support extension SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Slots abstract - an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. alias - the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. aliases alt_description\u279esource - the source of an attributed description alt_description\u279edescription - text of an attributed description alt_descriptions apply_to - Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. class_definition\u279eapply_to slot_definition\u279eapply_to attributes - Inline definition of slots base - python base type that implements this type definition bidirectional - in addition to preconditions entailing postconditions, the postconditions entail the preconditions boolean_slot - A grouping of slots that expression a boolean operator over a list of operands all_of - holds if all of the expressions hold class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of any_of - holds if at least one of the expressions hold class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of exactly_one_of - holds if only one of the expressions hold class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of none_of - holds if none of the expressions hold class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of class_uri - URI of the class in an RDF environment classes - class definitions classification_rules - the collection of classification rules that apply to all members of this class code_set - the identifier of an enumeration code set. code_set_tag - the version tag of the enumeration code set code_set_version - the version identifier of the enumeration code set comments - notes and comments about an element intended for external consumption conforms_to - An established standard to which the element conforms. created_by - agent that created the element created_on - time at which the element was created deactivated - a deactivated rule is not executed by the rules engine default_curi_maps - ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables default_prefix - default and base prefix -- used for ':' identifiers, @base and @vocab default_range - default slot range to be used if range element is omitted from a slot definition defining_slots - The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom definition_uri - the \"native\" URI of the element deprecated - Description of why and when this element will no longer be used deprecated element has exact replacement - When an element is deprecated, it can be automatically replaced by this uri or curie deprecated element has possible replacement - When an element is deprecated, it can be potentially replaced by this uri or curie description - a description of the element's purpose and use designates_type - True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition domain - defines the type of the subject of the slot. Given the following slot definition domain_of - the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context elseconditions - an expression that must hold for an instance of the class, if the preconditions no not hold emit_prefixes - a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. enums - enumerated ranges examples - example usages of an element extension\u279etag - a tag associated with an extension extension\u279evalue - the actual annotation extensions - a tag/text tuple attached to an arbitrary element annotations - a collection of tag/text tuples with the semantics of OWL Annotation followed_by - in a sequential list, this indicates the next member path_expression\u279efollowed_by from_schema - id of the schema that defined the element generation_date - date and time that the schema was loaded/generated id - The official schema URI id_prefixes - the identifier of this class or slot must begin with the URIs referenced by this prefix identifier - True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container ifabsent - function that provides a default value for the slot. Possible values for this slot are defined in imported_from - the imports entry that this element was derived from. Empty means primary source imports - other schemas that are included in this schema in_subset - used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) inherited - true means that the value of a slot is inherited by subclasses inlined - True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. inlined_as_list - True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. inverse - indicates that any instance of d s r implies that there is also an instance of r s' d is_a - specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a is_class_field - indicates that any instance, i, the domain of this slot will include an assert of i s range is_grouping_slot - true if this slot is a grouping slot is_usage_slot - True means that this slot was defined in a slot_usage situation key - True means that the key slot(s) uniquely identify the container. last_updated_on - time at which the element was last updated license - license for the schema list_value_specification_constant - Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant all_members - the value of the multiavlued slot is a list where all elements conform to the specified values. equals_number_in - the slot must have range number and the value of the slot must equal one of the specified values equals_string_in - the slot must have range string and the value of the slot must equal one of the specified values has_member - the values of the slot is multivalued with at least one member satisfying the condition local_name_source - the ncname of the source of the name local_name_value - a name assigned to an element in a given ontology local_names mappings - A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. broad mappings - A list of terms from different schemas or terminology systems that have broader meaning. close mappings - A list of terms from different schemas or terminology systems that have close meaning. exact mappings - A list of terms from different schemas or terminology systems that have identical meaning. narrow mappings - A list of terms from different schemas or terminology systems that have narrower meaning. related mappings - A list of terms from different schemas or terminology systems that have related meaning. maximum_value - for slots with ranges of type number, the value must be equal to or lowe than this meaning - the value meaning (in the 11179 sense) of a permissible value metamodel_version - Version of the metamodel used to load the schema minimum_value - for slots with ranges of type number, the value must be equal to or higher than this mixin - this slot or class can only be used as a mixin. mixins - List of definitions to be mixed in. Targets may be any definition of the same type class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins modified_by - agent that modified the element multivalued - true means that slot can have more than one value name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. schema_definition\u279ename notes - editorial notes about an element intended for internal consumption open_world - if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these owner - the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot path_rule - a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts pattern - the string value of the slot must conform to this regular expression permissible_values - A list of possible values for a slot range postconditions - an expression that must hold for an instance of the class, if the preconditions hold precedence - the relative order in which the element occurs preconditions - an expression that must hold in order for the rule to be applicable to an instance prefix_prefix - the nsname (sans ':' for a given prefix) prefix_reference - A URI associated with a given prefix prefixes - prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes pv_formula - Defines the specific formula to be used to generate the permissible values. range - defines the type of the object of the slot. Given the following slot definition range_expression - A range that is described as a boolean expression combining existing ranges readonly - If present, slot is read only. Text explains why recommended - true means that the slot should be present in the loaded definition, but this is not required relational_logical_characteristic - A property of a slot that pertains to its logical properties asymmetric - If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i irreflexive - If s is irreflexive, then there exists no i such i.s=i locally_reflexive - If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i reflexive - If s is reflexive, then i.s=i for all instances i symmetric - If s is symmetric, and i.s=v, then v.s=i transitive - If s is transitive, and i.s=z, and s.s=j, then i.s=j relational_role - the role a slot on a relationship class plays, for example, the subject, object or predicate roles repr - the name of the python object that implements this type definition represents_relationship - true if this class represents a relationship rather than an entity required - true means that the slot must be present in the loaded definition reversed - true if the slot is to be inversed role - the role played by the slot range rules - the collection of rules that apply to all members of this class class_definition\u279erules see_also - a reference singular_name - a name that is used in the singular form slot_conditions - the redefinition of a slot in the context of the containing class definition. schema_definition\u279eslots - slot definitions slot_group - allows for grouping of related slots into a grouping slot that serves the role of a group slot_names_unique - if true then induced/mangled slot names are not created for class_usage and attributes slot_uri - predicate of this slot for semantic web application slot_usage - the redefinition of a slot in the context of the containing class definition. slots - list of slot names that are applicable to a class source - A related resource from which the element is derived. source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema status - status of the element string_serialization - Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. subclass_of - rdfs:subClassOf to be emitted in OWL generation subproperty_of - Ontology property which this slot is a subproperty of subsets - list of subsets referenced in this model text title - the official title of the element todos - Outstanding issue that needs resolution transitive_form_of - If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive reflexive_transitive_form_of - transitive_form_of including the reflexive case traverse - the slot to traverse tree_root - indicator that this is the root class in tree structures type_definition\u279euri - The uri that defines the possible values for the type definition typeof - Names a parent type types - data types used in the model union_of - indicates that the domain class consists exactly of the members of the classes in the range unique_key_slots - list of slot names that form a key unique_keys - Set of unique keys for this slot usage_slot_name - The name of the slot referenced in the slot_usage value - example value example\u279edescription - description of what the value is doing value_specification_constant - Grouping for metamodel slots that constrain the a slot value to equal a specified constant equals_expression - the value of the slot must equal the value of the evaluated expression equals_number - the slot must have range of a number and the value of the slot must equal the specified value equals_string - the slot must have range string and the value of the slot must equal the specified value maximum_cardinality - the maximum number of entries for a multivalued slot minimum_cardinality - the minimum number of entries for a multivalued slot value_presence - if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) values_from - the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot version - particular version of schema Enums presence_enum - enumeration of conditions by which a slot value should be set pv_formula_options - The formula used to generate the set of permissible values from the code_set values relational_role_enum - enumeration of roles a slot on a relationship class can play Subsets Owl - Set of slots that appear in the OWL representation of a model Types Built in Bool Decimal ElementIdentifier NCName NodeIdentifier URI URIorCURIE XSDDate XSDDateTime XSDTime float int str Defined Boolean ( Bool ) - A binary (true or false) value Date ( XSDDate ) - a date (year, month and day) in an idealized calendar Datetime ( XSDDateTime ) - The combination of a date and time Decimal ( Decimal ) - A real number with arbitrary precision that conforms to the xsd:decimal specification Double ( float ) - A real number that conforms to the xsd:double specification Float ( float ) - A real number that conforms to the xsd:float specification Integer ( int ) - An integer Ncname ( NCName ) - Prefix part of CURIE Nodeidentifier ( NodeIdentifier ) - A URI, CURIE or BNODE that represents a node in a model. Objectidentifier ( ElementIdentifier ) - A URI or CURIE that represents an object in the model. String ( str ) - A character string Time ( XSDTime ) - A time object represents a (local) time of day, independent of any particular day Uri ( URI ) - a complete URI Uriorcurie ( URIorCURIE ) - a URI or a CURIE","title":"Index"},{"location":"#meta-schema","text":"A metamodel for defining linked open data schemas","title":"meta schema"},{"location":"#classes","text":"AltDescription - an attributed description AnonymousExpression AnonymousClassExpression AnonymousSlotExpression AnonymousTypeExpression ClassLevelRule - A rule that is applied to classes ClassRule - A rule that applies to instances of a class Element - a named element in the model Definition - base class for definitions ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition. Example - usage example and description Extension - a tag/value pair used to add non-model information to an entry Annotation - a tag/value pair with the semantics of OWL Annotation LocalName - an attributed label PathExpression - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue - a permissible value, accompanied by intended text and an optional mapping to a concept URI Prefix - prefix URI tuple UniqueKey - a collection of slots whose values uniquely identify an instance of a class","title":"Classes"},{"location":"#mixins","text":"Annotatable - mixin for classes that support annotations ClassExpression - A boolean expression that can be used to dynamically determine membership of a class CommonMetadata - Generic metadata shared across definitions Expression - general mixin for any class that can represent some form of expression SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Extensible - mixin for classes that support extension SlotExpression - an expression that constrains the range of values a slot can take TypeExpression","title":"Mixins"},{"location":"#slots","text":"abstract - an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. alias - the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. aliases alt_description\u279esource - the source of an attributed description alt_description\u279edescription - text of an attributed description alt_descriptions apply_to - Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. class_definition\u279eapply_to slot_definition\u279eapply_to attributes - Inline definition of slots base - python base type that implements this type definition bidirectional - in addition to preconditions entailing postconditions, the postconditions entail the preconditions boolean_slot - A grouping of slots that expression a boolean operator over a list of operands all_of - holds if all of the expressions hold class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of any_of - holds if at least one of the expressions hold class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of exactly_one_of - holds if only one of the expressions hold class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of none_of - holds if none of the expressions hold class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of class_uri - URI of the class in an RDF environment classes - class definitions classification_rules - the collection of classification rules that apply to all members of this class code_set - the identifier of an enumeration code set. code_set_tag - the version tag of the enumeration code set code_set_version - the version identifier of the enumeration code set comments - notes and comments about an element intended for external consumption conforms_to - An established standard to which the element conforms. created_by - agent that created the element created_on - time at which the element was created deactivated - a deactivated rule is not executed by the rules engine default_curi_maps - ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables default_prefix - default and base prefix -- used for ':' identifiers, @base and @vocab default_range - default slot range to be used if range element is omitted from a slot definition defining_slots - The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom definition_uri - the \"native\" URI of the element deprecated - Description of why and when this element will no longer be used deprecated element has exact replacement - When an element is deprecated, it can be automatically replaced by this uri or curie deprecated element has possible replacement - When an element is deprecated, it can be potentially replaced by this uri or curie description - a description of the element's purpose and use designates_type - True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition domain - defines the type of the subject of the slot. Given the following slot definition domain_of - the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context elseconditions - an expression that must hold for an instance of the class, if the preconditions no not hold emit_prefixes - a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. enums - enumerated ranges examples - example usages of an element extension\u279etag - a tag associated with an extension extension\u279evalue - the actual annotation extensions - a tag/text tuple attached to an arbitrary element annotations - a collection of tag/text tuples with the semantics of OWL Annotation followed_by - in a sequential list, this indicates the next member path_expression\u279efollowed_by from_schema - id of the schema that defined the element generation_date - date and time that the schema was loaded/generated id - The official schema URI id_prefixes - the identifier of this class or slot must begin with the URIs referenced by this prefix identifier - True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container ifabsent - function that provides a default value for the slot. Possible values for this slot are defined in imported_from - the imports entry that this element was derived from. Empty means primary source imports - other schemas that are included in this schema in_subset - used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) inherited - true means that the value of a slot is inherited by subclasses inlined - True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. inlined_as_list - True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. inverse - indicates that any instance of d s r implies that there is also an instance of r s' d is_a - specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a is_class_field - indicates that any instance, i, the domain of this slot will include an assert of i s range is_grouping_slot - true if this slot is a grouping slot is_usage_slot - True means that this slot was defined in a slot_usage situation key - True means that the key slot(s) uniquely identify the container. last_updated_on - time at which the element was last updated license - license for the schema list_value_specification_constant - Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant all_members - the value of the multiavlued slot is a list where all elements conform to the specified values. equals_number_in - the slot must have range number and the value of the slot must equal one of the specified values equals_string_in - the slot must have range string and the value of the slot must equal one of the specified values has_member - the values of the slot is multivalued with at least one member satisfying the condition local_name_source - the ncname of the source of the name local_name_value - a name assigned to an element in a given ontology local_names mappings - A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. broad mappings - A list of terms from different schemas or terminology systems that have broader meaning. close mappings - A list of terms from different schemas or terminology systems that have close meaning. exact mappings - A list of terms from different schemas or terminology systems that have identical meaning. narrow mappings - A list of terms from different schemas or terminology systems that have narrower meaning. related mappings - A list of terms from different schemas or terminology systems that have related meaning. maximum_value - for slots with ranges of type number, the value must be equal to or lowe than this meaning - the value meaning (in the 11179 sense) of a permissible value metamodel_version - Version of the metamodel used to load the schema minimum_value - for slots with ranges of type number, the value must be equal to or higher than this mixin - this slot or class can only be used as a mixin. mixins - List of definitions to be mixed in. Targets may be any definition of the same type class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins modified_by - agent that modified the element multivalued - true means that slot can have more than one value name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. schema_definition\u279ename notes - editorial notes about an element intended for internal consumption open_world - if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these owner - the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot path_rule - a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts pattern - the string value of the slot must conform to this regular expression permissible_values - A list of possible values for a slot range postconditions - an expression that must hold for an instance of the class, if the preconditions hold precedence - the relative order in which the element occurs preconditions - an expression that must hold in order for the rule to be applicable to an instance prefix_prefix - the nsname (sans ':' for a given prefix) prefix_reference - A URI associated with a given prefix prefixes - prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes pv_formula - Defines the specific formula to be used to generate the permissible values. range - defines the type of the object of the slot. Given the following slot definition range_expression - A range that is described as a boolean expression combining existing ranges readonly - If present, slot is read only. Text explains why recommended - true means that the slot should be present in the loaded definition, but this is not required relational_logical_characteristic - A property of a slot that pertains to its logical properties asymmetric - If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i irreflexive - If s is irreflexive, then there exists no i such i.s=i locally_reflexive - If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i reflexive - If s is reflexive, then i.s=i for all instances i symmetric - If s is symmetric, and i.s=v, then v.s=i transitive - If s is transitive, and i.s=z, and s.s=j, then i.s=j relational_role - the role a slot on a relationship class plays, for example, the subject, object or predicate roles repr - the name of the python object that implements this type definition represents_relationship - true if this class represents a relationship rather than an entity required - true means that the slot must be present in the loaded definition reversed - true if the slot is to be inversed role - the role played by the slot range rules - the collection of rules that apply to all members of this class class_definition\u279erules see_also - a reference singular_name - a name that is used in the singular form slot_conditions - the redefinition of a slot in the context of the containing class definition. schema_definition\u279eslots - slot definitions slot_group - allows for grouping of related slots into a grouping slot that serves the role of a group slot_names_unique - if true then induced/mangled slot names are not created for class_usage and attributes slot_uri - predicate of this slot for semantic web application slot_usage - the redefinition of a slot in the context of the containing class definition. slots - list of slot names that are applicable to a class source - A related resource from which the element is derived. source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema status - status of the element string_serialization - Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. subclass_of - rdfs:subClassOf to be emitted in OWL generation subproperty_of - Ontology property which this slot is a subproperty of subsets - list of subsets referenced in this model text title - the official title of the element todos - Outstanding issue that needs resolution transitive_form_of - If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive reflexive_transitive_form_of - transitive_form_of including the reflexive case traverse - the slot to traverse tree_root - indicator that this is the root class in tree structures type_definition\u279euri - The uri that defines the possible values for the type definition typeof - Names a parent type types - data types used in the model union_of - indicates that the domain class consists exactly of the members of the classes in the range unique_key_slots - list of slot names that form a key unique_keys - Set of unique keys for this slot usage_slot_name - The name of the slot referenced in the slot_usage value - example value example\u279edescription - description of what the value is doing value_specification_constant - Grouping for metamodel slots that constrain the a slot value to equal a specified constant equals_expression - the value of the slot must equal the value of the evaluated expression equals_number - the slot must have range of a number and the value of the slot must equal the specified value equals_string - the slot must have range string and the value of the slot must equal the specified value maximum_cardinality - the maximum number of entries for a multivalued slot minimum_cardinality - the minimum number of entries for a multivalued slot value_presence - if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) values_from - the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot version - particular version of schema","title":"Slots"},{"location":"#enums","text":"presence_enum - enumeration of conditions by which a slot value should be set pv_formula_options - The formula used to generate the set of permissible values from the code_set values relational_role_enum - enumeration of roles a slot on a relationship class can play","title":"Enums"},{"location":"#subsets","text":"Owl - Set of slots that appear in the OWL representation of a model","title":"Subsets"},{"location":"#types","text":"","title":"Types"},{"location":"#built-in","text":"Bool Decimal ElementIdentifier NCName NodeIdentifier URI URIorCURIE XSDDate XSDDateTime XSDTime float int str","title":"Built in"},{"location":"#defined","text":"Boolean ( Bool ) - A binary (true or false) value Date ( XSDDate ) - a date (year, month and day) in an idealized calendar Datetime ( XSDDateTime ) - The combination of a date and time Decimal ( Decimal ) - A real number with arbitrary precision that conforms to the xsd:decimal specification Double ( float ) - A real number that conforms to the xsd:double specification Float ( float ) - A real number that conforms to the xsd:float specification Integer ( int ) - An integer Ncname ( NCName ) - Prefix part of CURIE Nodeidentifier ( NodeIdentifier ) - A URI, CURIE or BNODE that represents a node in a model. Objectidentifier ( ElementIdentifier ) - A URI or CURIE that represents an object in the model. String ( str ) - A character string Time ( XSDTime ) - A time object represents a (local) time of day, independent of any particular day Uri ( URI ) - a complete URI Uriorcurie ( URIorCURIE ) - a URI or a CURIE","title":"Defined"},{"location":"AltDescription/","text":"Class: alt_description an attributed description URI: linkml:AltDescription Referenced by Class Element alt_descriptions 0..* AltDescription Attributes Own alt_description\u279esource 1..1 Description: the source of an attributed description Range: String alt_description\u279edescription 1..1 Description: text of an attributed description Range: String","title":"Class: alt_description"},{"location":"AltDescription/#class-alt_description","text":"an attributed description URI: linkml:AltDescription","title":"Class: alt_description"},{"location":"AltDescription/#referenced-by-class","text":"Element alt_descriptions 0..* AltDescription","title":"Referenced by Class"},{"location":"AltDescription/#attributes","text":"","title":"Attributes"},{"location":"AltDescription/#own","text":"alt_description\u279esource 1..1 Description: the source of an attributed description Range: String alt_description\u279edescription 1..1 Description: text of an attributed description Range: String","title":"Own"},{"location":"Annotatable/","text":"Class: annotatable mixin for classes that support annotations URI: linkml:Annotatable Mixin for Annotation (mixin) - a tag/value pair with the semantics of OWL Annotation AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class Referenced by Class Attributes Own annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Class: annotatable"},{"location":"Annotatable/#class-annotatable","text":"mixin for classes that support annotations URI: linkml:Annotatable","title":"Class: annotatable"},{"location":"Annotatable/#mixin-for","text":"Annotation (mixin) - a tag/value pair with the semantics of OWL Annotation AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class","title":"Mixin for"},{"location":"Annotatable/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"Annotatable/#attributes","text":"","title":"Attributes"},{"location":"Annotatable/#own","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Own"},{"location":"Annotation/","text":"Class: annotation a tag/value pair with the semantics of OWL Annotation URI: linkml:Annotation Parents is_a: Extension - a tag/value pair used to add non-model information to an entry Uses Mixin mixin: Annotatable - mixin for classes that support annotations Referenced by Class Annotatable annotations 0..* Annotation Attributes Own annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Inherited from extension: extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Class: annotation"},{"location":"Annotation/#class-annotation","text":"a tag/value pair with the semantics of OWL Annotation URI: linkml:Annotation","title":"Class: annotation"},{"location":"Annotation/#parents","text":"is_a: Extension - a tag/value pair used to add non-model information to an entry","title":"Parents"},{"location":"Annotation/#uses-mixin","text":"mixin: Annotatable - mixin for classes that support annotations","title":"Uses Mixin"},{"location":"Annotation/#referenced-by-class","text":"Annotatable annotations 0..* Annotation","title":"Referenced by Class"},{"location":"Annotation/#attributes","text":"","title":"Attributes"},{"location":"Annotation/#own","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Own"},{"location":"Annotation/#inherited-from-extension","text":"extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Inherited from extension:"},{"location":"AnonymousClassExpression/","text":"Class: anonymous_class_expression URI: linkml:AnonymousClassExpression Parents is_a: AnonymousExpression Uses Mixin mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class Referenced by Class ClassExpression class_expression\u279eall_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eany_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eexactly_one_of 0..* AnonymousClassExpression ClassExpression class_expression\u279enone_of 0..* AnonymousClassExpression ClassDefinition classification_rules 0..* AnonymousClassExpression None elseconditions 0..1 AnonymousClassExpression None postconditions 0..1 AnonymousClassExpression None preconditions 0..1 AnonymousClassExpression SlotExpression range_expression 0..1 AnonymousClassExpression Attributes Own is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition Mixed in from class_expression: class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Class: anonymous_class_expression"},{"location":"AnonymousClassExpression/#class-anonymous_class_expression","text":"URI: linkml:AnonymousClassExpression","title":"Class: anonymous_class_expression"},{"location":"AnonymousClassExpression/#parents","text":"is_a: AnonymousExpression","title":"Parents"},{"location":"AnonymousClassExpression/#uses-mixin","text":"mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class","title":"Uses Mixin"},{"location":"AnonymousClassExpression/#referenced-by-class","text":"ClassExpression class_expression\u279eall_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eany_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eexactly_one_of 0..* AnonymousClassExpression ClassExpression class_expression\u279enone_of 0..* AnonymousClassExpression ClassDefinition classification_rules 0..* AnonymousClassExpression None elseconditions 0..1 AnonymousClassExpression None postconditions 0..1 AnonymousClassExpression None preconditions 0..1 AnonymousClassExpression SlotExpression range_expression 0..1 AnonymousClassExpression","title":"Referenced by Class"},{"location":"AnonymousClassExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousClassExpression/#own","text":"is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition","title":"Own"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression","text":"class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_1","text":"class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_2","text":"class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_3","text":"class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_4","text":"slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Mixed in from class_expression:"},{"location":"AnonymousExpression/","text":"Class: anonymous_expression URI: linkml:AnonymousExpression Uses Mixin mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Children AnonymousClassExpression AnonymousSlotExpression Referenced by Class Attributes Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: anonymous_expression"},{"location":"AnonymousExpression/#class-anonymous_expression","text":"URI: linkml:AnonymousExpression","title":"Class: anonymous_expression"},{"location":"AnonymousExpression/#uses-mixin","text":"mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"AnonymousExpression/#children","text":"AnonymousClassExpression AnonymousSlotExpression","title":"Children"},{"location":"AnonymousExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"AnonymousExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousExpression/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"AnonymousExpression/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"AnonymousSlotExpression/","text":"Class: anonymous_slot_expression URI: linkml:AnonymousSlotExpression Parents is_a: AnonymousExpression Uses Mixin mixin: SlotExpression - an expression that constrains the range of values a slot can take Referenced by Class None has_member 0..1 AnonymousSlotExpression SlotExpression slot_expression\u279eall_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eany_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eexactly_one_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279enone_of 0..* AnonymousSlotExpression Attributes Mixed in from slot_expression: range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) Mixed in from slot_expression: range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression Mixed in from slot_expression: required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean Mixed in from slot_expression: recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean Mixed in from slot_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from slot_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from slot_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from slot_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from slot_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from slot_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from slot_expression: equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String Mixed in from slot_expression: minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression Mixed in from slot_expression: all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) Mixed in from slot_expression: slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Class: anonymous_slot_expression"},{"location":"AnonymousSlotExpression/#class-anonymous_slot_expression","text":"URI: linkml:AnonymousSlotExpression","title":"Class: anonymous_slot_expression"},{"location":"AnonymousSlotExpression/#parents","text":"is_a: AnonymousExpression","title":"Parents"},{"location":"AnonymousSlotExpression/#uses-mixin","text":"mixin: SlotExpression - an expression that constrains the range of values a slot can take","title":"Uses Mixin"},{"location":"AnonymousSlotExpression/#referenced-by-class","text":"None has_member 0..1 AnonymousSlotExpression SlotExpression slot_expression\u279eall_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eany_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eexactly_one_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279enone_of 0..* AnonymousSlotExpression","title":"Referenced by Class"},{"location":"AnonymousSlotExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression","text":"range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md)","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_1","text":"range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_2","text":"required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_3","text":"recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_6","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_7","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_8","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_9","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_10","text":"equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_11","text":"minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_12","text":"maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_13","text":"has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_14","text":"all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md)","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_15","text":"slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_16","text":"slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_17","text":"slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_18","text":"slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousTypeExpression/","text":"Class: anonymous_type_expression URI: linkml:AnonymousTypeExpression Uses Mixin mixin: TypeExpression Referenced by Class TypeExpression type_expression\u279eall_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eany_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eexactly_one_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279enone_of 0..* AnonymousTypeExpression Attributes Mixed in from type_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from type_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from type_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from type_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from type_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from type_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from type_expression: type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Class: anonymous_type_expression"},{"location":"AnonymousTypeExpression/#class-anonymous_type_expression","text":"URI: linkml:AnonymousTypeExpression","title":"Class: anonymous_type_expression"},{"location":"AnonymousTypeExpression/#uses-mixin","text":"mixin: TypeExpression","title":"Uses Mixin"},{"location":"AnonymousTypeExpression/#referenced-by-class","text":"TypeExpression type_expression\u279eall_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eany_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eexactly_one_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279enone_of 0..* AnonymousTypeExpression","title":"Referenced by Class"},{"location":"AnonymousTypeExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_1","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_2","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_3","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_6","text":"type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_7","text":"type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_8","text":"type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_9","text":"type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"Boolean/","text":"Type: boolean A binary (true or false) value URI: linkml:Boolean Root (builtin) type Bool Representation bool","title":"Type: boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: linkml:Boolean Root (builtin) type Bool Representation bool","title":"Type: boolean"},{"location":"ClassDefinition/","text":"Class: class_definition the definition of a class or interface URI: linkml:ClassDefinition Parents is_a: Definition - base class for definitions Uses Mixin mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class Referenced by Class ClassDefinition class_definition\u279eapply_to 0..* ClassDefinition ClassDefinition class_definition\u279eis_a 0..1 ClassDefinition ClassDefinition class_definition\u279emixins 0..* ClassDefinition SchemaDefinition classes 0..* ClassDefinition SlotDefinition domain 0..1 ClassDefinition SlotDefinition domain_of 0..* ClassDefinition ClassDefinition union_of 0..* ClassDefinition Attributes Own slots 0..* Description: list of slot names that are applicable to a class Range: SlotDefinition slot_usage 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition attributes 0..* Description: Inline definition of slots Range: SlotDefinition class_uri 0..1 Description: URI of the class in an RDF environment Range: Uriorcurie subclass_of 0..1 Description: rdfs:subClassOf to be emitted in OWL generation Range: Uriorcurie union_of 0..* Description: indicates that the domain class consists exactly of the members of the classes in the range Range: ClassDefinition defining_slots 0..* Description: The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom Range: SlotDefinition tree_root 0..1 Description: indicator that this is the root class in tree structures Range: Boolean unique_keys 0..* Description: Set of unique keys for this slot Range: UniqueKey class_definition\u279erules 0..* Description: the collection of rules that apply to all members of this class Range: ClassRule classification_rules 0..* Description: the collection of classification rules that apply to all members of this class Range: AnonymousClassExpression slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean represents_relationship 0..1 Description: true if this class represents a relationship rather than an entity Range: Boolean class_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: ClassDefinition class_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: ClassDefinition class_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: ClassDefinition Inherited from definition: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String Mixed in from class_expression: class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition Other properties Aliases: table record template message observation Close Mappings: owl:Class","title":"Class: class_definition"},{"location":"ClassDefinition/#class-class_definition","text":"the definition of a class or interface URI: linkml:ClassDefinition","title":"Class: class_definition"},{"location":"ClassDefinition/#parents","text":"is_a: Definition - base class for definitions","title":"Parents"},{"location":"ClassDefinition/#uses-mixin","text":"mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class","title":"Uses Mixin"},{"location":"ClassDefinition/#referenced-by-class","text":"ClassDefinition class_definition\u279eapply_to 0..* ClassDefinition ClassDefinition class_definition\u279eis_a 0..1 ClassDefinition ClassDefinition class_definition\u279emixins 0..* ClassDefinition SchemaDefinition classes 0..* ClassDefinition SlotDefinition domain 0..1 ClassDefinition SlotDefinition domain_of 0..* ClassDefinition ClassDefinition union_of 0..* ClassDefinition","title":"Referenced by Class"},{"location":"ClassDefinition/#attributes","text":"","title":"Attributes"},{"location":"ClassDefinition/#own","text":"slots 0..* Description: list of slot names that are applicable to a class Range: SlotDefinition slot_usage 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition attributes 0..* Description: Inline definition of slots Range: SlotDefinition class_uri 0..1 Description: URI of the class in an RDF environment Range: Uriorcurie subclass_of 0..1 Description: rdfs:subClassOf to be emitted in OWL generation Range: Uriorcurie union_of 0..* Description: indicates that the domain class consists exactly of the members of the classes in the range Range: ClassDefinition defining_slots 0..* Description: The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom Range: SlotDefinition tree_root 0..1 Description: indicator that this is the root class in tree structures Range: Boolean unique_keys 0..* Description: Set of unique keys for this slot Range: UniqueKey class_definition\u279erules 0..* Description: the collection of rules that apply to all members of this class Range: ClassRule classification_rules 0..* Description: the collection of classification rules that apply to all members of this class Range: AnonymousClassExpression slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean represents_relationship 0..1 Description: true if this class represents a relationship rather than an entity Range: Boolean class_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: ClassDefinition class_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: ClassDefinition class_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: ClassDefinition","title":"Own"},{"location":"ClassDefinition/#inherited-from-definition","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String","title":"Inherited from definition:"},{"location":"ClassDefinition/#mixed-in-from-class_expression","text":"class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_1","text":"class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_2","text":"class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_3","text":"class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_4","text":"slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#other-properties","text":"Aliases: table record template message observation Close Mappings: owl:Class","title":"Other properties"},{"location":"ClassExpression/","text":"Class: class_expression A boolean expression that can be used to dynamically determine membership of a class URI: linkml:ClassExpression Mixin for AnonymousClassExpression (mixin) ClassDefinition (mixin) - the definition of a class or interface Referenced by Class Attributes Own class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Class: class_expression"},{"location":"ClassExpression/#class-class_expression","text":"A boolean expression that can be used to dynamically determine membership of a class URI: linkml:ClassExpression","title":"Class: class_expression"},{"location":"ClassExpression/#mixin-for","text":"AnonymousClassExpression (mixin) ClassDefinition (mixin) - the definition of a class or interface","title":"Mixin for"},{"location":"ClassExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"ClassExpression/#attributes","text":"","title":"Attributes"},{"location":"ClassExpression/#own","text":"class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Own"},{"location":"ClassLevelRule/","text":"Class: class_level_rule A rule that is applied to classes URI: linkml:ClassLevelRule Children ClassRule - A rule that applies to instances of a class Referenced by Class Attributes","title":"Class: class_level_rule"},{"location":"ClassLevelRule/#class-class_level_rule","text":"A rule that is applied to classes URI: linkml:ClassLevelRule","title":"Class: class_level_rule"},{"location":"ClassLevelRule/#children","text":"ClassRule - A rule that applies to instances of a class","title":"Children"},{"location":"ClassLevelRule/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"ClassLevelRule/#attributes","text":"","title":"Attributes"},{"location":"ClassRule/","text":"Class: class_rule A rule that applies to instances of a class URI: linkml:ClassRule Parents is_a: ClassLevelRule - A rule that is applied to classes Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class ClassDefinition class_definition\u279erules 0..* ClassRule ClassDefinition rules 0..* ClassRule Attributes Own preconditions 0..1 Description: an expression that must hold in order for the rule to be applicable to an instance Range: AnonymousClassExpression postconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions hold Range: AnonymousClassExpression elseconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions no not hold Range: AnonymousClassExpression bidirectional 0..1 Description: in addition to preconditions entailing postconditions, the postconditions entail the preconditions Range: Boolean open_world 0..1 Description: if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these Range: Boolean precedence 0..1 Description: the relative order in which the element occurs Range: Integer deactivated 0..1 Description: a deactivated rule is not executed by the rules engine Range: Boolean Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie Other properties Aliases: if rule Close Mappings: sh:TripleRule swrl:Imp","title":"Class: class_rule"},{"location":"ClassRule/#class-class_rule","text":"A rule that applies to instances of a class URI: linkml:ClassRule","title":"Class: class_rule"},{"location":"ClassRule/#parents","text":"is_a: ClassLevelRule - A rule that is applied to classes","title":"Parents"},{"location":"ClassRule/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"ClassRule/#referenced-by-class","text":"ClassDefinition class_definition\u279erules 0..* ClassRule ClassDefinition rules 0..* ClassRule","title":"Referenced by Class"},{"location":"ClassRule/#attributes","text":"","title":"Attributes"},{"location":"ClassRule/#own","text":"preconditions 0..1 Description: an expression that must hold in order for the rule to be applicable to an instance Range: AnonymousClassExpression postconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions hold Range: AnonymousClassExpression elseconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions no not hold Range: AnonymousClassExpression bidirectional 0..1 Description: in addition to preconditions entailing postconditions, the postconditions entail the preconditions Range: Boolean open_world 0..1 Description: if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these Range: Boolean precedence 0..1 Description: the relative order in which the element occurs Range: Integer deactivated 0..1 Description: a deactivated rule is not executed by the rules engine Range: Boolean","title":"Own"},{"location":"ClassRule/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"ClassRule/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"ClassRule/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#other-properties","text":"Aliases: if rule Close Mappings: sh:TripleRule swrl:Imp","title":"Other properties"},{"location":"CommonMetadata/","text":"Class: common_metadata Generic metadata shared across definitions URI: linkml:CommonMetadata Mixin for AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class Referenced by Class Attributes Own description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) alt_descriptions 0..* Range: AltDescription title 0..1 Description: the official title of the element Range: String in subsets: (owl) deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String todos 0..* Description: Outstanding issue that needs resolution Range: String notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) examples 0..* Description: example usages of an element Range: Example in subsets: (owl) in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition from_schema 0..1 Description: id of the schema that defined the element Range: Uri imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: common_metadata"},{"location":"CommonMetadata/#class-common_metadata","text":"Generic metadata shared across definitions URI: linkml:CommonMetadata","title":"Class: common_metadata"},{"location":"CommonMetadata/#mixin-for","text":"AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class","title":"Mixin for"},{"location":"CommonMetadata/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"CommonMetadata/#attributes","text":"","title":"Attributes"},{"location":"CommonMetadata/#own","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) alt_descriptions 0..* Range: AltDescription title 0..1 Description: the official title of the element Range: String in subsets: (owl) deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String todos 0..* Description: Outstanding issue that needs resolution Range: String notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) examples 0..* Description: example usages of an element Range: Example in subsets: (owl) in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition from_schema 0..1 Description: id of the schema that defined the element Range: Uri imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Own"},{"location":"Date/","text":"Type: date a date (year, month and day) in an idealized calendar URI: linkml:Date Root (builtin) type XSDDate Representation str","title":"Type: date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: linkml:Date Root (builtin) type XSDDate Representation str","title":"Type: date"},{"location":"Datetime/","text":"Type: datetime The combination of a date and time URI: linkml:Datetime Root (builtin) type XSDDateTime Representation str","title":"Type: datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: linkml:Datetime Root (builtin) type XSDDateTime Representation str","title":"Type: datetime"},{"location":"Decimal/","text":"Type: decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: linkml:Decimal Root (builtin) type Decimal","title":"Type: decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: linkml:Decimal Root (builtin) type Decimal","title":"Type: decimal"},{"location":"Definition/","text":"Class: definition base class for definitions URI: linkml:Definition Parents is_a: Element - a named element in the model Children ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot Referenced by Class Definition apply_to 0..* Definition Definition is_a 0..1 Definition Definition mixins 0..* Definition SlotDefinition owner 0..1 Definition Attributes Own is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean mixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: Definition apply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: Definition values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Other properties See also: https://en.wikipedia.org/wiki/Data_element_definition","title":"Class: definition"},{"location":"Definition/#class-definition","text":"base class for definitions URI: linkml:Definition","title":"Class: definition"},{"location":"Definition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"Definition/#children","text":"ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot","title":"Children"},{"location":"Definition/#referenced-by-class","text":"Definition apply_to 0..* Definition Definition is_a 0..1 Definition Definition mixins 0..* Definition SlotDefinition owner 0..1 Definition","title":"Referenced by Class"},{"location":"Definition/#attributes","text":"","title":"Attributes"},{"location":"Definition/#own","text":"is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean mixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: Definition apply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: Definition values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String","title":"Own"},{"location":"Definition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"Definition/#other-properties","text":"See also: https://en.wikipedia.org/wiki/Data_element_definition","title":"Other properties"},{"location":"Double/","text":"Type: double A real number that conforms to the xsd:double specification URI: linkml:Double Root (builtin) type float","title":"Type: double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: linkml:Double Root (builtin) type float","title":"Type: double"},{"location":"Element/","text":"Class: element a named element in the model URI: linkml:Element Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Children Definition - base class for definitions EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition. Referenced by Class SlotDefinition range 0..1 Element Attributes Own name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie Other properties See also: https://en.wikipedia.org/wiki/Data_element","title":"Class: element"},{"location":"Element/#class-element","text":"a named element in the model URI: linkml:Element","title":"Class: element"},{"location":"Element/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"Element/#children","text":"Definition - base class for definitions EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition.","title":"Children"},{"location":"Element/#referenced-by-class","text":"SlotDefinition range 0..1 Element","title":"Referenced by Class"},{"location":"Element/#attributes","text":"","title":"Attributes"},{"location":"Element/#own","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Own"},{"location":"Element/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"Element/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"Element/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Element/#other-properties","text":"See also: https://en.wikipedia.org/wiki/Data_element","title":"Other properties"},{"location":"EnumDefinition/","text":"Class: enum_definition List of values that constrain the range of a slot URI: linkml:EnumDefinition Parents is_a: Element - a named element in the model Referenced by Class SchemaDefinition enums 0..* EnumDefinition Attributes Own code_set 0..1 Description: the identifier of an enumeration code set. Range: Uriorcurie code_set_tag 0..1 Description: the version tag of the enumeration code set Range: String code_set_version 0..1 Description: the version identifier of the enumeration code set Range: String pv_formula 0..1 Description: Defines the specific formula to be used to generate the permissible values. Range: pv_formula_options permissible_values 0..* Description: A list of possible values for a slot range Range: PermissibleValue Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Other properties Close Mappings: qb:HierarchicalCodeList","title":"Class: enum_definition"},{"location":"EnumDefinition/#class-enum_definition","text":"List of values that constrain the range of a slot URI: linkml:EnumDefinition","title":"Class: enum_definition"},{"location":"EnumDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"EnumDefinition/#referenced-by-class","text":"SchemaDefinition enums 0..* EnumDefinition","title":"Referenced by Class"},{"location":"EnumDefinition/#attributes","text":"","title":"Attributes"},{"location":"EnumDefinition/#own","text":"code_set 0..1 Description: the identifier of an enumeration code set. Range: Uriorcurie code_set_tag 0..1 Description: the version tag of the enumeration code set Range: String code_set_version 0..1 Description: the version identifier of the enumeration code set Range: String pv_formula 0..1 Description: Defines the specific formula to be used to generate the permissible values. Range: pv_formula_options permissible_values 0..* Description: A list of possible values for a slot range Range: PermissibleValue","title":"Own"},{"location":"EnumDefinition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"EnumDefinition/#other-properties","text":"Close Mappings: qb:HierarchicalCodeList","title":"Other properties"},{"location":"Example/","text":"Class: example usage example and description URI: linkml:Example Referenced by Class Element examples 0..* Example Attributes Own value 0..1 Description: example value Range: String example\u279edescription 0..1 Description: description of what the value is doing Range: String","title":"Class: example"},{"location":"Example/#class-example","text":"usage example and description URI: linkml:Example","title":"Class: example"},{"location":"Example/#referenced-by-class","text":"Element examples 0..* Example","title":"Referenced by Class"},{"location":"Example/#attributes","text":"","title":"Attributes"},{"location":"Example/#own","text":"value 0..1 Description: example value Range: String example\u279edescription 0..1 Description: description of what the value is doing Range: String","title":"Own"},{"location":"Expression/","text":"Class: expression general mixin for any class that can represent some form of expression URI: linkml:Expression Children SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Mixin for AnonymousExpression (mixin) PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups Referenced by Class None all_of 0..* Expression None any_of 0..* Expression None boolean_slot 0..* Expression None exactly_one_of 0..* Expression None followed_by 0..1 Expression None none_of 0..* Expression Attributes","title":"Class: expression"},{"location":"Expression/#class-expression","text":"general mixin for any class that can represent some form of expression URI: linkml:Expression","title":"Class: expression"},{"location":"Expression/#children","text":"SlotExpression - an expression that constrains the range of values a slot can take TypeExpression","title":"Children"},{"location":"Expression/#mixin-for","text":"AnonymousExpression (mixin) PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups","title":"Mixin for"},{"location":"Expression/#referenced-by-class","text":"None all_of 0..* Expression None any_of 0..* Expression None boolean_slot 0..* Expression None exactly_one_of 0..* Expression None followed_by 0..1 Expression None none_of 0..* Expression","title":"Referenced by Class"},{"location":"Expression/#attributes","text":"","title":"Attributes"},{"location":"Extensible/","text":"Class: extensible mixin for classes that support extension URI: linkml:Extensible Mixin for AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class Referenced by Class Attributes Own extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Class: extensible"},{"location":"Extensible/#class-extensible","text":"mixin for classes that support extension URI: linkml:Extensible","title":"Class: extensible"},{"location":"Extensible/#mixin-for","text":"AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class","title":"Mixin for"},{"location":"Extensible/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"Extensible/#attributes","text":"","title":"Attributes"},{"location":"Extensible/#own","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Own"},{"location":"Extension/","text":"Class: extension a tag/value pair used to add non-model information to an entry URI: linkml:Extension Children Annotation - a tag/value pair with the semantics of OWL Annotation Referenced by Class Extensible extensions 0..* Extension Attributes Own extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Class: extension"},{"location":"Extension/#class-extension","text":"a tag/value pair used to add non-model information to an entry URI: linkml:Extension","title":"Class: extension"},{"location":"Extension/#children","text":"Annotation - a tag/value pair with the semantics of OWL Annotation","title":"Children"},{"location":"Extension/#referenced-by-class","text":"Extensible extensions 0..* Extension","title":"Referenced by Class"},{"location":"Extension/#attributes","text":"","title":"Attributes"},{"location":"Extension/#own","text":"extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Own"},{"location":"Float/","text":"Type: float A real number that conforms to the xsd:float specification URI: linkml:Float Root (builtin) type float","title":"Type: float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: linkml:Float Root (builtin) type float","title":"Type: float"},{"location":"Integer/","text":"Type: integer An integer URI: linkml:Integer Root (builtin) type int","title":"Type: integer"},{"location":"Integer/#type-integer","text":"An integer URI: linkml:Integer Root (builtin) type int","title":"Type: integer"},{"location":"LocalName/","text":"Class: local_name an attributed label URI: linkml:LocalName Referenced by Class Element local_names 0..* LocalName Attributes Own local_name_source 1..1 Description: the ncname of the source of the name Range: Ncname local_name_value 1..1 Description: a name assigned to an element in a given ontology Range: String","title":"Class: local_name"},{"location":"LocalName/#class-local_name","text":"an attributed label URI: linkml:LocalName","title":"Class: local_name"},{"location":"LocalName/#referenced-by-class","text":"Element local_names 0..* LocalName","title":"Referenced by Class"},{"location":"LocalName/#attributes","text":"","title":"Attributes"},{"location":"LocalName/#own","text":"local_name_source 1..1 Description: the ncname of the source of the name Range: Ncname local_name_value 1..1 Description: a name assigned to an element in a given ontology Range: String","title":"Own"},{"location":"Ncname/","text":"Type: ncname Prefix part of CURIE URI: linkml:Ncname Root (builtin) type NCName Representation str","title":"Type: ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: linkml:Ncname Root (builtin) type NCName Representation str","title":"Type: ncname"},{"location":"Nodeidentifier/","text":"Type: nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: linkml:Nodeidentifier Root (builtin) type NodeIdentifier Representation str","title":"Type: nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: linkml:Nodeidentifier Root (builtin) type NodeIdentifier Representation str","title":"Type: nodeidentifier"},{"location":"Objectidentifier/","text":"Type: objectidentifier A URI or CURIE that represents an object in the model. URI: linkml:Objectidentifier Root (builtin) type ElementIdentifier Representation str Other properties Comments: Used for inheritence and type checking","title":"Type: objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: linkml:Objectidentifier Root (builtin) type ElementIdentifier Representation str","title":"Type: objectidentifier"},{"location":"Objectidentifier/#other-properties","text":"Comments: Used for inheritence and type checking","title":"Other properties"},{"location":"Owl/","text":"Subset: owl Set of slots that appear in the OWL representation of a model URI: linkml:owl Classes Mixins Slots comments - notes and comments about an element intended for external consumption description - a description of the element's purpose and use examples - example usages of an element generation_date - date and time that the schema was loaded/generated license - license for the schema metamodel_version - Version of the metamodel used to load the schema name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. notes - editorial notes about an element intended for internal consumption schema_definition\u279ename see_also - a reference source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema title - the official title of the element version - particular version of schema Types Enums","title":"Subset: owl"},{"location":"Owl/#subset-owl","text":"Set of slots that appear in the OWL representation of a model URI: linkml:owl","title":"Subset: owl"},{"location":"Owl/#classes","text":"","title":"Classes"},{"location":"Owl/#mixins","text":"","title":"Mixins"},{"location":"Owl/#slots","text":"comments - notes and comments about an element intended for external consumption description - a description of the element's purpose and use examples - example usages of an element generation_date - date and time that the schema was loaded/generated license - license for the schema metamodel_version - Version of the metamodel used to load the schema name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. notes - editorial notes about an element intended for internal consumption schema_definition\u279ename see_also - a reference source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema title - the official title of the element version - particular version of schema","title":"Slots"},{"location":"Owl/#types","text":"","title":"Types"},{"location":"Owl/#enums","text":"","title":"Enums"},{"location":"PathExpression/","text":"Class: path_expression An expression that describes an abstract path from an object to another through a sequence of slot lookups URI: linkml:PathExpression Uses Mixin mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class PathExpression path_expression\u279eall_of 0..* PathExpression PathExpression path_expression\u279eany_of 0..* PathExpression PathExpression path_expression\u279eexactly_one_of 0..* PathExpression PathExpression path_expression\u279efollowed_by 0..1 PathExpression PathExpression path_expression\u279enone_of 0..* PathExpression SlotDefinition path_rule 0..1 PathExpression Attributes Own path_expression\u279efollowed_by 0..1 Description: in a sequential list, this indicates the next member Range: PathExpression path_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: PathExpression path_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: PathExpression path_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: PathExpression path_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: PathExpression reversed 0..1 Description: true if the slot is to be inversed Range: Boolean traverse 0..1 Description: the slot to traverse Range: SlotDefinition range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: path_expression"},{"location":"PathExpression/#class-path_expression","text":"An expression that describes an abstract path from an object to another through a sequence of slot lookups URI: linkml:PathExpression","title":"Class: path_expression"},{"location":"PathExpression/#uses-mixin","text":"mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"PathExpression/#referenced-by-class","text":"PathExpression path_expression\u279eall_of 0..* PathExpression PathExpression path_expression\u279eany_of 0..* PathExpression PathExpression path_expression\u279eexactly_one_of 0..* PathExpression PathExpression path_expression\u279efollowed_by 0..1 PathExpression PathExpression path_expression\u279enone_of 0..* PathExpression SlotDefinition path_rule 0..1 PathExpression","title":"Referenced by Class"},{"location":"PathExpression/#attributes","text":"","title":"Attributes"},{"location":"PathExpression/#own","text":"path_expression\u279efollowed_by 0..1 Description: in a sequential list, this indicates the next member Range: PathExpression path_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: PathExpression path_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: PathExpression path_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: PathExpression path_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: PathExpression reversed 0..1 Description: true if the slot is to be inversed Range: Boolean traverse 0..1 Description: the slot to traverse Range: SlotDefinition range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression","title":"Own"},{"location":"PathExpression/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"PathExpression/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"PathExpression/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/","text":"Class: permissible_value a permissible value, accompanied by intended text and an optional mapping to a concept URI URI: linkml:PermissibleValue Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class PermissibleValue permissible_value\u279eis_a 0..1 PermissibleValue PermissibleValue permissible_value\u279emixins 0..* PermissibleValue EnumDefinition permissible_values 0..* PermissibleValue Attributes Own text 1..1 Range: String description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) meaning 0..1 Description: the value meaning (in the 11179 sense) of a permissible value Range: Uriorcurie permissible_value\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: PermissibleValue permissible_value\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: PermissibleValue Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: permissible_value"},{"location":"PermissibleValue/#class-permissible_value","text":"a permissible value, accompanied by intended text and an optional mapping to a concept URI URI: linkml:PermissibleValue","title":"Class: permissible_value"},{"location":"PermissibleValue/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"PermissibleValue/#referenced-by-class","text":"PermissibleValue permissible_value\u279eis_a 0..1 PermissibleValue PermissibleValue permissible_value\u279emixins 0..* PermissibleValue EnumDefinition permissible_values 0..* PermissibleValue","title":"Referenced by Class"},{"location":"PermissibleValue/#attributes","text":"","title":"Attributes"},{"location":"PermissibleValue/#own","text":"text 1..1 Range: String description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) meaning 0..1 Description: the value meaning (in the 11179 sense) of a permissible value Range: Uriorcurie permissible_value\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: PermissibleValue permissible_value\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: PermissibleValue","title":"Own"},{"location":"PermissibleValue/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"PermissibleValue/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_1","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_2","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_3","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_4","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_5","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_6","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_7","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_8","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_9","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_10","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_11","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_12","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_13","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Prefix/","text":"Class: prefix prefix URI tuple URI: linkml:Prefix Referenced by Class SchemaDefinition prefixes 0..* Prefix Attributes Own prefix_prefix 1..1 Description: the nsname (sans ':' for a given prefix) Range: Ncname prefix_reference 1..1 Description: A URI associated with a given prefix Range: Uri","title":"Class: prefix"},{"location":"Prefix/#class-prefix","text":"prefix URI tuple URI: linkml:Prefix","title":"Class: prefix"},{"location":"Prefix/#referenced-by-class","text":"SchemaDefinition prefixes 0..* Prefix","title":"Referenced by Class"},{"location":"Prefix/#attributes","text":"","title":"Attributes"},{"location":"Prefix/#own","text":"prefix_prefix 1..1 Description: the nsname (sans ':' for a given prefix) Range: Ncname prefix_reference 1..1 Description: A URI associated with a given prefix Range: Uri","title":"Own"},{"location":"SchemaDefinition/","text":"Class: schema_definition a collection of subset, type, slot and class definitions URI: linkml:SchemaDefinition Parents is_a: Element - a named element in the model Referenced by Class Attributes Own id 1..1 Description: The official schema URI Range: Uri version 0..1 Description: particular version of schema Range: String in subsets: (owl) imports 0..* Description: other schemas that are included in this schema Range: Uriorcurie license 0..1 Description: license for the schema Range: String in subsets: (owl) prefixes 0..* Description: prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes Range: Prefix emit_prefixes 0..* Description: a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. Range: Ncname default_curi_maps 0..* Description: ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables Range: String default_prefix 0..1 Description: default and base prefix -- used for ':' identifiers, @base and @vocab Range: String default_range 0..1 Description: default slot range to be used if range element is omitted from a slot definition Range: TypeDefinition subsets 0..* Description: list of subsets referenced in this model Range: SubsetDefinition types 0..* Description: data types used in the model Range: TypeDefinition enums 0..* Description: enumerated ranges Range: EnumDefinition schema_definition\u279eslots 0..* Description: slot definitions Range: SlotDefinition classes 0..* Description: class definitions Range: ClassDefinition metamodel_version 0..1 Description: Version of the metamodel used to load the schema Range: String in subsets: (owl) source_file 0..1 Description: name, uri or description of the source of the schema Range: String in subsets: (owl) source_file_date 0..1 Description: modification date of the source of the schema Range: Datetime in subsets: (owl) source_file_size 0..1 Description: size in bytes of the source of the schema Range: Integer in subsets: (owl) generation_date 0..1 Description: date and time that the schema was loaded/generated Range: Datetime in subsets: (owl) slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean schema_definition\u279ename 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: Ncname in subsets: (owl) Inherited from element: id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Other properties Aliases: data dictionary See also: https://en.wikipedia.org/wiki/Data_dictionary","title":"Class: schema_definition"},{"location":"SchemaDefinition/#class-schema_definition","text":"a collection of subset, type, slot and class definitions URI: linkml:SchemaDefinition","title":"Class: schema_definition"},{"location":"SchemaDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"SchemaDefinition/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"SchemaDefinition/#attributes","text":"","title":"Attributes"},{"location":"SchemaDefinition/#own","text":"id 1..1 Description: The official schema URI Range: Uri version 0..1 Description: particular version of schema Range: String in subsets: (owl) imports 0..* Description: other schemas that are included in this schema Range: Uriorcurie license 0..1 Description: license for the schema Range: String in subsets: (owl) prefixes 0..* Description: prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes Range: Prefix emit_prefixes 0..* Description: a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. Range: Ncname default_curi_maps 0..* Description: ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables Range: String default_prefix 0..1 Description: default and base prefix -- used for ':' identifiers, @base and @vocab Range: String default_range 0..1 Description: default slot range to be used if range element is omitted from a slot definition Range: TypeDefinition subsets 0..* Description: list of subsets referenced in this model Range: SubsetDefinition types 0..* Description: data types used in the model Range: TypeDefinition enums 0..* Description: enumerated ranges Range: EnumDefinition schema_definition\u279eslots 0..* Description: slot definitions Range: SlotDefinition classes 0..* Description: class definitions Range: ClassDefinition metamodel_version 0..1 Description: Version of the metamodel used to load the schema Range: String in subsets: (owl) source_file 0..1 Description: name, uri or description of the source of the schema Range: String in subsets: (owl) source_file_date 0..1 Description: modification date of the source of the schema Range: Datetime in subsets: (owl) source_file_size 0..1 Description: size in bytes of the source of the schema Range: Integer in subsets: (owl) generation_date 0..1 Description: date and time that the schema was loaded/generated Range: Datetime in subsets: (owl) slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean schema_definition\u279ename 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: Ncname in subsets: (owl)","title":"Own"},{"location":"SchemaDefinition/#inherited-from-element","text":"id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"SchemaDefinition/#other-properties","text":"Aliases: data dictionary See also: https://en.wikipedia.org/wiki/Data_dictionary","title":"Other properties"},{"location":"SlotDefinition/","text":"Class: slot_definition the definition of a property or a slot URI: linkml:SlotDefinition Parents is_a: Definition - base class for definitions Uses Mixin mixin: SlotExpression - an expression that constrains the range of values a slot can take Referenced by Class None all_members 0..* SlotDefinition ClassDefinition attributes 0..* SlotDefinition ClassDefinition defining_slots 0..* SlotDefinition SlotDefinition inverse 0..1 SlotDefinition None reflexive_transitive_form_of 0..1 SlotDefinition None slot_conditions 0..* SlotDefinition SlotDefinition slot_definition\u279eapply_to 0..* SlotDefinition SlotDefinition slot_definition\u279eis_a 0..1 SlotDefinition SlotDefinition slot_definition\u279emixins 0..* SlotDefinition SchemaDefinition schema_definition\u279eslots 0..* SlotDefinition SlotDefinition slot_group 0..1 SlotDefinition ClassDefinition slot_usage 0..* SlotDefinition ClassDefinition slots 0..* SlotDefinition SlotDefinition subproperty_of 0..1 SlotDefinition None transitive_form_of 0..1 SlotDefinition None traverse 0..1 SlotDefinition UniqueKey unique_key_slots 1..* SlotDefinition Attributes Own singular_name 0..1 Description: a name that is used in the singular form Range: String domain 0..1 Description: defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 * Range: [ClassDefinition](ClassDefinition.md) slot_uri 0..1 Description: predicate of this slot for semantic web application Range: Uriorcurie multivalued 0..1 Description: true means that slot can have more than one value Range: Boolean inherited 0..1 Description: true means that the value of a slot is inherited by subclasses Range: Boolean readonly 0..1 Description: If present, slot is read only. Text explains why Range: String ifabsent 0..1 Description: function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: [Tt]rue -- boolean True [Ff]alse -- boolean False int(value) -- integer value str(value) -- string value default_range -- schema default range bnode -- blank node identifier slot_uri -- URI for the slot class_curie -- CURIE for the containing class class_uri -- URI for the containing class Range: String inlined 0..1 Description: True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. Range: Boolean inlined_as_list 0..1 Description: True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. Range: Boolean key 0..1 Description: True means that the key slot(s) uniquely identify the container. Range: Boolean identifier 0..1 Description: True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container Range: Boolean designates_type 0..1 Description: True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition Range: Boolean alias 0..1 Description: the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. Range: String owner 0..1 Description: the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot Range: Definition domain_of 0..* Description: the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context Range: ClassDefinition subproperty_of 0..1 Description: Ontology property which this slot is a subproperty of Range: SlotDefinition symmetric 0..1 Description: If s is symmetric, and i.s=v, then v.s=i Range: Boolean reflexive 0..1 Description: If s is reflexive, then i.s=i for all instances i Range: Boolean locally_reflexive 0..1 Description: If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i Range: Boolean irreflexive 0..1 Description: If s is irreflexive, then there exists no i such i.s=i Range: Boolean asymmetric 0..1 Description: If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i Range: Boolean transitive 0..1 Description: If s is transitive, and i.s=z, and s.s=j, then i.s=j Range: Boolean inverse 0..1 Description: indicates that any instance of d s r implies that there is also an instance of r s' d Range: SlotDefinition is_class_field 0..1 Description: indicates that any instance, i, the domain of this slot will include an assert of i s range Range: Boolean transitive_form_of 0..1 Description: If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive Range: SlotDefinition reflexive_transitive_form_of 0..1 Description: transitive_form_of including the reflexive case Range: SlotDefinition role 0..1 Description: the role played by the slot range Range: String is_usage_slot 0..1 Description: True means that this slot was defined in a slot_usage situation Range: Boolean usage_slot_name 0..1 Description: The name of the slot referenced in the slot_usage Range: String relational_role 0..1 Description: the role a slot on a relationship class plays, for example, the subject, object or predicate roles Range: relational_role_enum slot_group 0..1 Description: allows for grouping of related slots into a grouping slot that serves the role of a group Range: SlotDefinition is_grouping_slot 0..1 Description: true if this slot is a grouping slot Range: Boolean path_rule 0..1 Description: a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts Range: PathExpression slot_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: SlotDefinition slot_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: SlotDefinition slot_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: SlotDefinition Inherited from definition: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String Mixed in from slot_expression: range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) Mixed in from slot_expression: range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression Mixed in from slot_expression: required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean Mixed in from slot_expression: recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean Mixed in from slot_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from slot_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from slot_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from slot_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from slot_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from slot_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from slot_expression: equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String Mixed in from slot_expression: minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression Mixed in from slot_expression: all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) Mixed in from slot_expression: slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression Other properties Aliases: slot field property attribute column variable Close Mappings: rdf:Property","title":"Class: slot_definition"},{"location":"SlotDefinition/#class-slot_definition","text":"the definition of a property or a slot URI: linkml:SlotDefinition","title":"Class: slot_definition"},{"location":"SlotDefinition/#parents","text":"is_a: Definition - base class for definitions","title":"Parents"},{"location":"SlotDefinition/#uses-mixin","text":"mixin: SlotExpression - an expression that constrains the range of values a slot can take","title":"Uses Mixin"},{"location":"SlotDefinition/#referenced-by-class","text":"None all_members 0..* SlotDefinition ClassDefinition attributes 0..* SlotDefinition ClassDefinition defining_slots 0..* SlotDefinition SlotDefinition inverse 0..1 SlotDefinition None reflexive_transitive_form_of 0..1 SlotDefinition None slot_conditions 0..* SlotDefinition SlotDefinition slot_definition\u279eapply_to 0..* SlotDefinition SlotDefinition slot_definition\u279eis_a 0..1 SlotDefinition SlotDefinition slot_definition\u279emixins 0..* SlotDefinition SchemaDefinition schema_definition\u279eslots 0..* SlotDefinition SlotDefinition slot_group 0..1 SlotDefinition ClassDefinition slot_usage 0..* SlotDefinition ClassDefinition slots 0..* SlotDefinition SlotDefinition subproperty_of 0..1 SlotDefinition None transitive_form_of 0..1 SlotDefinition None traverse 0..1 SlotDefinition UniqueKey unique_key_slots 1..* SlotDefinition","title":"Referenced by Class"},{"location":"SlotDefinition/#attributes","text":"","title":"Attributes"},{"location":"SlotDefinition/#own","text":"singular_name 0..1 Description: a name that is used in the singular form Range: String domain 0..1 Description: defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 * Range: [ClassDefinition](ClassDefinition.md) slot_uri 0..1 Description: predicate of this slot for semantic web application Range: Uriorcurie multivalued 0..1 Description: true means that slot can have more than one value Range: Boolean inherited 0..1 Description: true means that the value of a slot is inherited by subclasses Range: Boolean readonly 0..1 Description: If present, slot is read only. Text explains why Range: String ifabsent 0..1 Description: function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: [Tt]rue -- boolean True [Ff]alse -- boolean False int(value) -- integer value str(value) -- string value default_range -- schema default range bnode -- blank node identifier slot_uri -- URI for the slot class_curie -- CURIE for the containing class class_uri -- URI for the containing class Range: String inlined 0..1 Description: True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. Range: Boolean inlined_as_list 0..1 Description: True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. Range: Boolean key 0..1 Description: True means that the key slot(s) uniquely identify the container. Range: Boolean identifier 0..1 Description: True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container Range: Boolean designates_type 0..1 Description: True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition Range: Boolean alias 0..1 Description: the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. Range: String owner 0..1 Description: the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot Range: Definition domain_of 0..* Description: the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context Range: ClassDefinition subproperty_of 0..1 Description: Ontology property which this slot is a subproperty of Range: SlotDefinition symmetric 0..1 Description: If s is symmetric, and i.s=v, then v.s=i Range: Boolean reflexive 0..1 Description: If s is reflexive, then i.s=i for all instances i Range: Boolean locally_reflexive 0..1 Description: If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i Range: Boolean irreflexive 0..1 Description: If s is irreflexive, then there exists no i such i.s=i Range: Boolean asymmetric 0..1 Description: If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i Range: Boolean transitive 0..1 Description: If s is transitive, and i.s=z, and s.s=j, then i.s=j Range: Boolean inverse 0..1 Description: indicates that any instance of d s r implies that there is also an instance of r s' d Range: SlotDefinition is_class_field 0..1 Description: indicates that any instance, i, the domain of this slot will include an assert of i s range Range: Boolean transitive_form_of 0..1 Description: If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive Range: SlotDefinition reflexive_transitive_form_of 0..1 Description: transitive_form_of including the reflexive case Range: SlotDefinition role 0..1 Description: the role played by the slot range Range: String is_usage_slot 0..1 Description: True means that this slot was defined in a slot_usage situation Range: Boolean usage_slot_name 0..1 Description: The name of the slot referenced in the slot_usage Range: String relational_role 0..1 Description: the role a slot on a relationship class plays, for example, the subject, object or predicate roles Range: relational_role_enum slot_group 0..1 Description: allows for grouping of related slots into a grouping slot that serves the role of a group Range: SlotDefinition is_grouping_slot 0..1 Description: true if this slot is a grouping slot Range: Boolean path_rule 0..1 Description: a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts Range: PathExpression slot_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: SlotDefinition slot_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: SlotDefinition slot_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: SlotDefinition","title":"Own"},{"location":"SlotDefinition/#inherited-from-definition","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String","title":"Inherited from definition:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression","text":"range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md)","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_1","text":"range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_2","text":"required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_3","text":"recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_6","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_7","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_8","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_9","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_10","text":"equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_11","text":"minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_12","text":"maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_13","text":"has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_14","text":"all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md)","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_15","text":"slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_16","text":"slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_17","text":"slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_18","text":"slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#other-properties","text":"Aliases: slot field property attribute column variable Close Mappings: rdf:Property","title":"Other properties"},{"location":"SlotExpression/","text":"Class: slot_expression an expression that constrains the range of values a slot can take URI: linkml:SlotExpression Parents is_a: Expression - general mixin for any class that can represent some form of expression Mixin for AnonymousSlotExpression (mixin) SlotDefinition (mixin) - the definition of a property or a slot Referenced by Class Attributes Own range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Class: slot_expression"},{"location":"SlotExpression/#class-slot_expression","text":"an expression that constrains the range of values a slot can take URI: linkml:SlotExpression","title":"Class: slot_expression"},{"location":"SlotExpression/#parents","text":"is_a: Expression - general mixin for any class that can represent some form of expression","title":"Parents"},{"location":"SlotExpression/#mixin-for","text":"AnonymousSlotExpression (mixin) SlotDefinition (mixin) - the definition of a property or a slot","title":"Mixin for"},{"location":"SlotExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"SlotExpression/#attributes","text":"","title":"Attributes"},{"location":"SlotExpression/#own","text":"range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Own"},{"location":"String/","text":"Type: string A character string URI: linkml:String Root (builtin) type str","title":"Type: string"},{"location":"String/#type-string","text":"A character string URI: linkml:String Root (builtin) type str","title":"Type: string"},{"location":"SubsetDefinition/","text":"Class: subset_definition the name and description of a subset URI: linkml:SubsetDefinition Parents is_a: Element - a named element in the model Referenced by Class Element in_subset 0..* SubsetDefinition SchemaDefinition subsets 0..* SubsetDefinition Attributes Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Class: subset_definition"},{"location":"SubsetDefinition/#class-subset_definition","text":"the name and description of a subset URI: linkml:SubsetDefinition","title":"Class: subset_definition"},{"location":"SubsetDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"SubsetDefinition/#referenced-by-class","text":"Element in_subset 0..* SubsetDefinition SchemaDefinition subsets 0..* SubsetDefinition","title":"Referenced by Class"},{"location":"SubsetDefinition/#attributes","text":"","title":"Attributes"},{"location":"SubsetDefinition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"Time/","text":"Type: time A time object represents a (local) time of day, independent of any particular day URI: linkml:Time Root (builtin) type XSDTime Representation str","title":"Type: time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: linkml:Time Root (builtin) type XSDTime Representation str","title":"Type: time"},{"location":"TypeDefinition/","text":"Class: type_definition A data type definition. URI: linkml:TypeDefinition Parents is_a: Element - a named element in the model Uses Mixin mixin: TypeExpression Referenced by Class SchemaDefinition default_range 0..1 TypeDefinition TypeDefinition typeof 0..1 TypeDefinition SchemaDefinition types 0..* TypeDefinition Attributes Own typeof 0..1 Description: Names a parent type Range: TypeDefinition base 0..1 Description: python base type that implements this type definition Range: String type_definition\u279euri 0..1 Description: The uri that defines the possible values for the type definition Range: Uriorcurie repr 0..1 Description: the name of the python object that implements this type definition Range: String Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Mixed in from type_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from type_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from type_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from type_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from type_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from type_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from type_expression: type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Class: type_definition"},{"location":"TypeDefinition/#class-type_definition","text":"A data type definition. URI: linkml:TypeDefinition","title":"Class: type_definition"},{"location":"TypeDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"TypeDefinition/#uses-mixin","text":"mixin: TypeExpression","title":"Uses Mixin"},{"location":"TypeDefinition/#referenced-by-class","text":"SchemaDefinition default_range 0..1 TypeDefinition TypeDefinition typeof 0..1 TypeDefinition SchemaDefinition types 0..* TypeDefinition","title":"Referenced by Class"},{"location":"TypeDefinition/#attributes","text":"","title":"Attributes"},{"location":"TypeDefinition/#own","text":"typeof 0..1 Description: Names a parent type Range: TypeDefinition base 0..1 Description: python base type that implements this type definition Range: String type_definition\u279euri 0..1 Description: The uri that defines the possible values for the type definition Range: Uriorcurie repr 0..1 Description: the name of the python object that implements this type definition Range: String","title":"Own"},{"location":"TypeDefinition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"TypeDefinition/#mixed-in-from-type_expression","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_1","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_2","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_3","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_6","text":"type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_7","text":"type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_8","text":"type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_9","text":"type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeExpression/","text":"Class: type_expression URI: linkml:TypeExpression Parents is_a: Expression - general mixin for any class that can represent some form of expression Mixin for AnonymousTypeExpression (mixin) TypeDefinition (mixin) - A data type definition. Referenced by Class Attributes Own pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Class: type_expression"},{"location":"TypeExpression/#class-type_expression","text":"URI: linkml:TypeExpression","title":"Class: type_expression"},{"location":"TypeExpression/#parents","text":"is_a: Expression - general mixin for any class that can represent some form of expression","title":"Parents"},{"location":"TypeExpression/#mixin-for","text":"AnonymousTypeExpression (mixin) TypeDefinition (mixin) - A data type definition.","title":"Mixin for"},{"location":"TypeExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"TypeExpression/#attributes","text":"","title":"Attributes"},{"location":"TypeExpression/#own","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Own"},{"location":"UniqueKey/","text":"Class: unique_key a collection of slots whose values uniquely identify an instance of a class URI: linkml:UniqueKey Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class ClassDefinition unique_keys 0..* UniqueKey Attributes Own unique_key_slots 1..* Description: list of slot names that form a key Range: SlotDefinition Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: unique_key"},{"location":"UniqueKey/#class-unique_key","text":"a collection of slots whose values uniquely identify an instance of a class URI: linkml:UniqueKey","title":"Class: unique_key"},{"location":"UniqueKey/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"UniqueKey/#referenced-by-class","text":"ClassDefinition unique_keys 0..* UniqueKey","title":"Referenced by Class"},{"location":"UniqueKey/#attributes","text":"","title":"Attributes"},{"location":"UniqueKey/#own","text":"unique_key_slots 1..* Description: list of slot names that form a key Range: SlotDefinition","title":"Own"},{"location":"UniqueKey/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"UniqueKey/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"UniqueKey/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Uri/","text":"Type: uri a complete URI URI: linkml:Uri Root (builtin) type URI Representation str","title":"Type: uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: linkml:Uri Root (builtin) type URI Representation str","title":"Type: uri"},{"location":"Uriorcurie/","text":"Type: uriorcurie a URI or a CURIE URI: linkml:Uriorcurie Root (builtin) type URIorCURIE Representation str","title":"Type: uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: linkml:Uriorcurie Root (builtin) type URIorCURIE Representation str","title":"Type: uriorcurie"},{"location":"abstract/","text":"Slot: abstract an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. URI: linkml:abstract Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition Definition SlotDefinition","title":"Slot: abstract"},{"location":"abstract/#slot-abstract","text":"an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. URI: linkml:abstract","title":"Slot: abstract"},{"location":"abstract/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"abstract/#parents","text":"","title":"Parents"},{"location":"abstract/#children","text":"","title":"Children"},{"location":"abstract/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"alias/","text":"Slot: alias the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. URI: linkml:alias Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition Other properties Mappings: skos:prefLabel","title":"Slot: alias"},{"location":"alias/#slot-alias","text":"the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. URI: linkml:alias","title":"Slot: alias"},{"location":"alias/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"alias/#parents","text":"","title":"Parents"},{"location":"alias/#children","text":"","title":"Children"},{"location":"alias/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"alias/#other-properties","text":"Mappings: skos:prefLabel","title":"Other properties"},{"location":"aliases/","text":"Slot: aliases URI: linkml:aliases Domain and Range Element \u2192 0..* String Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:altLabel","title":"Slot: aliases"},{"location":"aliases/#slot-aliases","text":"URI: linkml:aliases","title":"Slot: aliases"},{"location":"aliases/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"aliases/#parents","text":"","title":"Parents"},{"location":"aliases/#children","text":"","title":"Children"},{"location":"aliases/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"aliases/#other-properties","text":"Mappings: skos:altLabel","title":"Other properties"},{"location":"all_members/","text":"Slot: all_members the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 URI: linkml:all_members Domain and Range None \u2192 0..* SlotDefinition Parents is_a: list_value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: all_members"},{"location":"all_members/#slot-all_members","text":"the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 URI: linkml:all_members","title":"Slot: all_members"},{"location":"all_members/#domain-and-range","text":"None \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"all_members/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"all_members/#children","text":"","title":"Children"},{"location":"all_members/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:all_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of Used by Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:all_of","title":"Slot: all_of"},{"location":"all_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"all_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"all_of/#children","text":"class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of","title":"Children"},{"location":"all_of/#used-by","text":"","title":"Used by"},{"location":"all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"alt_description_source/","text":"Slot: source the source of an attributed description URI: linkml:alt_description_source Domain and Range AltDescription \u2192 1..1 String Parents Children Used by AltDescription","title":"Slot: source"},{"location":"alt_description_source/#slot-source","text":"the source of an attributed description URI: linkml:alt_description_source","title":"Slot: source"},{"location":"alt_description_source/#domain-and-range","text":"AltDescription \u2192 1..1 String","title":"Domain and Range"},{"location":"alt_description_source/#parents","text":"","title":"Parents"},{"location":"alt_description_source/#children","text":"","title":"Children"},{"location":"alt_description_source/#used-by","text":"AltDescription","title":"Used by"},{"location":"alt_description_text/","text":"Slot: description text of an attributed description URI: linkml:alt_description_text Domain and Range AltDescription \u2192 1..1 String Parents Children Used by AltDescription","title":"Slot: description"},{"location":"alt_description_text/#slot-description","text":"text of an attributed description URI: linkml:alt_description_text","title":"Slot: description"},{"location":"alt_description_text/#domain-and-range","text":"AltDescription \u2192 1..1 String","title":"Domain and Range"},{"location":"alt_description_text/#parents","text":"","title":"Parents"},{"location":"alt_description_text/#children","text":"","title":"Children"},{"location":"alt_description_text/#used-by","text":"AltDescription","title":"Used by"},{"location":"alt_descriptions/","text":"Slot: alt_descriptions URI: linkml:alt_descriptions Domain and Range Element \u2192 0..* AltDescription Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: alt_descriptions"},{"location":"alt_descriptions/#slot-alt_descriptions","text":"URI: linkml:alt_descriptions","title":"Slot: alt_descriptions"},{"location":"alt_descriptions/#domain-and-range","text":"Element \u2192 0..* AltDescription","title":"Domain and Range"},{"location":"alt_descriptions/#parents","text":"","title":"Parents"},{"location":"alt_descriptions/#children","text":"","title":"Children"},{"location":"alt_descriptions/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"annotations/","text":"Slot: annotations a collection of tag/text tuples with the semantics of OWL Annotation URI: linkml:annotations Domain and Range Annotatable \u2192 0..* Annotation Parents is_a: extensions Children Used by Annotatable Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: annotations"},{"location":"annotations/#slot-annotations","text":"a collection of tag/text tuples with the semantics of OWL Annotation URI: linkml:annotations","title":"Slot: annotations"},{"location":"annotations/#domain-and-range","text":"Annotatable \u2192 0..* Annotation","title":"Domain and Range"},{"location":"annotations/#parents","text":"is_a: extensions","title":"Parents"},{"location":"annotations/#children","text":"","title":"Children"},{"location":"annotations/#used-by","text":"Annotatable Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:any_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of Used by Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:any_of","title":"Slot: any_of"},{"location":"any_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"any_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"any_of/#children","text":"class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of","title":"Children"},{"location":"any_of/#used-by","text":"","title":"Used by"},{"location":"any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"apply_to/","text":"Slot: apply_to Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:apply_to Domain and Range Definition \u2192 0..* Definition Parents Children class_definition\u279eapply_to slot_definition\u279eapply_to Used by Definition","title":"Slot: apply_to"},{"location":"apply_to/#slot-apply_to","text":"Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:apply_to","title":"Slot: apply_to"},{"location":"apply_to/#domain-and-range","text":"Definition \u2192 0..* Definition","title":"Domain and Range"},{"location":"apply_to/#parents","text":"","title":"Parents"},{"location":"apply_to/#children","text":"class_definition\u279eapply_to slot_definition\u279eapply_to","title":"Children"},{"location":"apply_to/#used-by","text":"Definition","title":"Used by"},{"location":"asymmetric/","text":"Slot: asymmetric If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i URI: linkml:asymmetric Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Comments: asymmetry is the combination of antisymmetry and irreflexivity","title":"Slot: asymmetric"},{"location":"asymmetric/#slot-asymmetric","text":"If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i URI: linkml:asymmetric","title":"Slot: asymmetric"},{"location":"asymmetric/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"asymmetric/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"asymmetric/#children","text":"","title":"Children"},{"location":"asymmetric/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"asymmetric/#other-properties","text":"Comments: asymmetry is the combination of antisymmetry and irreflexivity","title":"Other properties"},{"location":"attributes/","text":"Slot: attributes Inline definition of slots URI: linkml:attributes Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition Other properties Comments: attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.","title":"Slot: attributes"},{"location":"attributes/#slot-attributes","text":"Inline definition of slots URI: linkml:attributes","title":"Slot: attributes"},{"location":"attributes/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"attributes/#parents","text":"","title":"Parents"},{"location":"attributes/#children","text":"","title":"Children"},{"location":"attributes/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"attributes/#other-properties","text":"Comments: attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.","title":"Other properties"},{"location":"base/","text":"Slot: base python base type that implements this type definition URI: linkml:base Domain and Range TypeDefinition \u2192 0..1 String Parents Children Used by TypeDefinition Other properties Comments: every root type must have a base the base is inherited by child types but may be overriden. Base compatibility is not checked.","title":"Slot: base"},{"location":"base/#slot-base","text":"python base type that implements this type definition URI: linkml:base","title":"Slot: base"},{"location":"base/#domain-and-range","text":"TypeDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"base/#parents","text":"","title":"Parents"},{"location":"base/#children","text":"","title":"Children"},{"location":"base/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"base/#other-properties","text":"Comments: every root type must have a base the base is inherited by child types but may be overriden. Base compatibility is not checked.","title":"Other properties"},{"location":"bidirectional/","text":"Slot: bidirectional in addition to preconditions entailing postconditions, the postconditions entail the preconditions URI: linkml:bidirectional Domain and Range None \u2192 0..1 Boolean Parents Children Used by ClassRule Other properties Aliases: iff if and only if","title":"Slot: bidirectional"},{"location":"bidirectional/#slot-bidirectional","text":"in addition to preconditions entailing postconditions, the postconditions entail the preconditions URI: linkml:bidirectional","title":"Slot: bidirectional"},{"location":"bidirectional/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"bidirectional/#parents","text":"","title":"Parents"},{"location":"bidirectional/#children","text":"","title":"Children"},{"location":"bidirectional/#used-by","text":"ClassRule","title":"Used by"},{"location":"bidirectional/#other-properties","text":"Aliases: iff if and only if","title":"Other properties"},{"location":"boolean_slot/","text":"Slot: boolean_slot A grouping of slots that expression a boolean operator over a list of operands URI: linkml:boolean_slot Domain and Range None \u2192 0..* Expression Parents Children all_of any_of exactly_one_of none_of Used by","title":"Slot: boolean_slot"},{"location":"boolean_slot/#slot-boolean_slot","text":"A grouping of slots that expression a boolean operator over a list of operands URI: linkml:boolean_slot","title":"Slot: boolean_slot"},{"location":"boolean_slot/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"boolean_slot/#parents","text":"","title":"Parents"},{"location":"boolean_slot/#children","text":"all_of any_of exactly_one_of none_of","title":"Children"},{"location":"boolean_slot/#used-by","text":"","title":"Used by"},{"location":"broad_mappings/","text":"Slot: broad mappings A list of terms from different schemas or terminology systems that have broader meaning. URI: linkml:broad_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:broadMatch","title":"Slot: broad mappings"},{"location":"broad_mappings/#slot-broad-mappings","text":"A list of terms from different schemas or terminology systems that have broader meaning. URI: linkml:broad_mappings","title":"Slot: broad mappings"},{"location":"broad_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"broad_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"broad_mappings/#children","text":"","title":"Children"},{"location":"broad_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"broad_mappings/#other-properties","text":"Mappings: skos:broadMatch","title":"Other properties"},{"location":"class_definition_apply_to/","text":"Slot: apply_to Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:class_definition_apply_to Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents is_a: apply_to Children Used by ClassDefinition","title":"Slot: apply_to"},{"location":"class_definition_apply_to/#slot-apply_to","text":"Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:class_definition_apply_to","title":"Slot: apply_to"},{"location":"class_definition_apply_to/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"class_definition_apply_to/#parents","text":"is_a: apply_to","title":"Parents"},{"location":"class_definition_apply_to/#children","text":"","title":"Children"},{"location":"class_definition_apply_to/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:class_definition_is_a Domain and Range ClassDefinition \u2192 0..1 ClassDefinition Parents is_a: is_a Children Used by ClassDefinition","title":"Slot: is_a"},{"location":"class_definition_is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:class_definition_is_a","title":"Slot: is_a"},{"location":"class_definition_is_a/#domain-and-range","text":"ClassDefinition \u2192 0..1 ClassDefinition","title":"Domain and Range"},{"location":"class_definition_is_a/#parents","text":"is_a: is_a","title":"Parents"},{"location":"class_definition_is_a/#children","text":"","title":"Children"},{"location":"class_definition_is_a/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:class_definition_mixins Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents is_a: mixins Children Used by ClassDefinition Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"class_definition_mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:class_definition_mixins","title":"Slot: mixins"},{"location":"class_definition_mixins/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"class_definition_mixins/#parents","text":"is_a: mixins","title":"Parents"},{"location":"class_definition_mixins/#children","text":"","title":"Children"},{"location":"class_definition_mixins/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"class_definition_rules/","text":"Slot: rules the collection of rules that apply to all members of this class URI: linkml:class_definition_rules Domain and Range ClassDefinition \u2192 0..* ClassRule Parents is_a: rules Children Used by ClassDefinition Other properties Mappings: sh:rule","title":"Slot: rules"},{"location":"class_definition_rules/#slot-rules","text":"the collection of rules that apply to all members of this class URI: linkml:class_definition_rules","title":"Slot: rules"},{"location":"class_definition_rules/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassRule","title":"Domain and Range"},{"location":"class_definition_rules/#parents","text":"is_a: rules","title":"Parents"},{"location":"class_definition_rules/#children","text":"","title":"Children"},{"location":"class_definition_rules/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_rules/#other-properties","text":"Mappings: sh:rule","title":"Other properties"},{"location":"class_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:class_expression_all_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: all_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"class_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:class_expression_all_of","title":"Slot: all_of"},{"location":"class_expression_all_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"class_expression_all_of/#children","text":"","title":"Children"},{"location":"class_expression_all_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"class_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:class_expression_any_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: any_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"class_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:class_expression_any_of","title":"Slot: any_of"},{"location":"class_expression_any_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"class_expression_any_of/#children","text":"","title":"Children"},{"location":"class_expression_any_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"class_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:class_expression_exactly_one_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: exactly_one_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"class_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:class_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"class_expression_exactly_one_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"class_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"class_expression_exactly_one_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"class_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:class_expression_none_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: none_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"class_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:class_expression_none_of","title":"Slot: none_of"},{"location":"class_expression_none_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"class_expression_none_of/#children","text":"","title":"Children"},{"location":"class_expression_none_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"class_uri/","text":"Slot: class_uri URI of the class in an RDF environment URI: linkml:class_uri Domain and Range ClassDefinition \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition","title":"Slot: class_uri"},{"location":"class_uri/#slot-class_uri","text":"URI of the class in an RDF environment URI: linkml:class_uri","title":"Slot: class_uri"},{"location":"class_uri/#domain-and-range","text":"ClassDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"class_uri/#parents","text":"","title":"Parents"},{"location":"class_uri/#children","text":"","title":"Children"},{"location":"class_uri/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"classes/","text":"Slot: classes class definitions URI: linkml:classes Domain and Range SchemaDefinition \u2192 0..* ClassDefinition Parents Children Used by SchemaDefinition","title":"Slot: classes"},{"location":"classes/#slot-classes","text":"class definitions URI: linkml:classes","title":"Slot: classes"},{"location":"classes/#domain-and-range","text":"SchemaDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"classes/#parents","text":"","title":"Parents"},{"location":"classes/#children","text":"","title":"Children"},{"location":"classes/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"classification_rules/","text":"Slot: classification_rules the collection of classification rules that apply to all members of this class URI: linkml:classification_rules Domain and Range ClassDefinition \u2192 0..* AnonymousClassExpression Parents Children Used by ClassDefinition","title":"Slot: classification_rules"},{"location":"classification_rules/#slot-classification_rules","text":"the collection of classification rules that apply to all members of this class URI: linkml:classification_rules","title":"Slot: classification_rules"},{"location":"classification_rules/#domain-and-range","text":"ClassDefinition \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"classification_rules/#parents","text":"","title":"Parents"},{"location":"classification_rules/#children","text":"","title":"Children"},{"location":"classification_rules/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"close_mappings/","text":"Slot: close mappings A list of terms from different schemas or terminology systems that have close meaning. URI: linkml:close_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:closeMatch","title":"Slot: close mappings"},{"location":"close_mappings/#slot-close-mappings","text":"A list of terms from different schemas or terminology systems that have close meaning. URI: linkml:close_mappings","title":"Slot: close mappings"},{"location":"close_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"close_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"close_mappings/#children","text":"","title":"Children"},{"location":"close_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"close_mappings/#other-properties","text":"Mappings: skos:closeMatch","title":"Other properties"},{"location":"code_set/","text":"Slot: code_set the identifier of an enumeration code set. URI: linkml:code_set Domain and Range EnumDefinition \u2192 0..1 Uriorcurie Parents Children Used by EnumDefinition","title":"Slot: code_set"},{"location":"code_set/#slot-code_set","text":"the identifier of an enumeration code set. URI: linkml:code_set","title":"Slot: code_set"},{"location":"code_set/#domain-and-range","text":"EnumDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"code_set/#parents","text":"","title":"Parents"},{"location":"code_set/#children","text":"","title":"Children"},{"location":"code_set/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"code_set_tag/","text":"Slot: code_set_tag the version tag of the enumeration code set URI: linkml:code_set_tag Domain and Range EnumDefinition \u2192 0..1 String Parents Children Used by EnumDefinition Other properties Comments: enum_definition cannot have both a code_set_tag and a code_set_version","title":"Slot: code_set_tag"},{"location":"code_set_tag/#slot-code_set_tag","text":"the version tag of the enumeration code set URI: linkml:code_set_tag","title":"Slot: code_set_tag"},{"location":"code_set_tag/#domain-and-range","text":"EnumDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"code_set_tag/#parents","text":"","title":"Parents"},{"location":"code_set_tag/#children","text":"","title":"Children"},{"location":"code_set_tag/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"code_set_tag/#other-properties","text":"Comments: enum_definition cannot have both a code_set_tag and a code_set_version","title":"Other properties"},{"location":"code_set_version/","text":"Slot: code_set_version the version identifier of the enumeration code set URI: linkml:code_set_version Domain and Range EnumDefinition \u2192 0..1 String Parents Children Used by EnumDefinition Other properties Comments: we assume that version identifiers lexically sort in temporal order. Recommend semver when possible","title":"Slot: code_set_version"},{"location":"code_set_version/#slot-code_set_version","text":"the version identifier of the enumeration code set URI: linkml:code_set_version","title":"Slot: code_set_version"},{"location":"code_set_version/#domain-and-range","text":"EnumDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"code_set_version/#parents","text":"","title":"Parents"},{"location":"code_set_version/#children","text":"","title":"Children"},{"location":"code_set_version/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"code_set_version/#other-properties","text":"Comments: we assume that version identifiers lexically sort in temporal order. Recommend semver when possible","title":"Other properties"},{"location":"comments/","text":"Slot: comments notes and comments about an element intended for external consumption URI: linkml:comments Domain and Range Element \u2192 0..* String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:note In Subsets: owl","title":"Slot: comments"},{"location":"comments/#slot-comments","text":"notes and comments about an element intended for external consumption URI: linkml:comments","title":"Slot: comments"},{"location":"comments/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"comments/#parents","text":"","title":"Parents"},{"location":"comments/#children","text":"","title":"Children"},{"location":"comments/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"comments/#other-properties","text":"Mappings: skos:note In Subsets: owl","title":"Other properties"},{"location":"conforms_to/","text":"Slot: conforms_to An established standard to which the element conforms. URI: linkml:conforms_to Domain and Range Element \u2192 0..1 String Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: dcterms:conformsTo","title":"Slot: conforms_to"},{"location":"conforms_to/#slot-conforms_to","text":"An established standard to which the element conforms. URI: linkml:conforms_to","title":"Slot: conforms_to"},{"location":"conforms_to/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"conforms_to/#parents","text":"","title":"Parents"},{"location":"conforms_to/#children","text":"","title":"Children"},{"location":"conforms_to/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"conforms_to/#other-properties","text":"Mappings: dcterms:conformsTo","title":"Other properties"},{"location":"created_by/","text":"Slot: created_by agent that created the element URI: linkml:created_by Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: pav:createdBy","title":"Slot: created_by"},{"location":"created_by/#slot-created_by","text":"agent that created the element URI: linkml:created_by","title":"Slot: created_by"},{"location":"created_by/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"created_by/#parents","text":"","title":"Parents"},{"location":"created_by/#children","text":"","title":"Children"},{"location":"created_by/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"created_by/#other-properties","text":"Mappings: pav:createdBy","title":"Other properties"},{"location":"created_on/","text":"Slot: created_on time at which the element was created URI: linkml:created_on Domain and Range Element \u2192 0..1 Datetime Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: pav:createdOn","title":"Slot: created_on"},{"location":"created_on/#slot-created_on","text":"time at which the element was created URI: linkml:created_on","title":"Slot: created_on"},{"location":"created_on/#domain-and-range","text":"Element \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"created_on/#parents","text":"","title":"Parents"},{"location":"created_on/#children","text":"","title":"Children"},{"location":"created_on/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"created_on/#other-properties","text":"Mappings: pav:createdOn","title":"Other properties"},{"location":"credits/","text":"Credits this project was made using the Link Model Language (LinkML) framework","title":"Credits"},{"location":"credits/#credits","text":"this project was made using the Link Model Language (LinkML) framework","title":"Credits"},{"location":"deactivated/","text":"Slot: deactivated a deactivated rule is not executed by the rules engine URI: linkml:deactivated Domain and Range None \u2192 0..1 Boolean Parents Children Used by ClassRule Other properties Mappings: sh:deactivated","title":"Slot: deactivated"},{"location":"deactivated/#slot-deactivated","text":"a deactivated rule is not executed by the rules engine URI: linkml:deactivated","title":"Slot: deactivated"},{"location":"deactivated/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"deactivated/#parents","text":"","title":"Parents"},{"location":"deactivated/#children","text":"","title":"Children"},{"location":"deactivated/#used-by","text":"ClassRule","title":"Used by"},{"location":"deactivated/#other-properties","text":"Mappings: sh:deactivated","title":"Other properties"},{"location":"default_curi_maps/","text":"Slot: default_curi_maps ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables URI: linkml:default_curi_maps Domain and Range SchemaDefinition \u2192 0..* String Parents Children Used by SchemaDefinition","title":"Slot: default_curi_maps"},{"location":"default_curi_maps/#slot-default_curi_maps","text":"ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables URI: linkml:default_curi_maps","title":"Slot: default_curi_maps"},{"location":"default_curi_maps/#domain-and-range","text":"SchemaDefinition \u2192 0..* String","title":"Domain and Range"},{"location":"default_curi_maps/#parents","text":"","title":"Parents"},{"location":"default_curi_maps/#children","text":"","title":"Children"},{"location":"default_curi_maps/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"default_prefix/","text":"Slot: default_prefix default and base prefix -- used for ':' identifiers, @base and @vocab URI: linkml:default_prefix Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition","title":"Slot: default_prefix"},{"location":"default_prefix/#slot-default_prefix","text":"default and base prefix -- used for ':' identifiers, @base and @vocab URI: linkml:default_prefix","title":"Slot: default_prefix"},{"location":"default_prefix/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"default_prefix/#parents","text":"","title":"Parents"},{"location":"default_prefix/#children","text":"","title":"Children"},{"location":"default_prefix/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"default_range/","text":"Slot: default_range default slot range to be used if range element is omitted from a slot definition URI: linkml:default_range Domain and Range SchemaDefinition \u2192 0..1 TypeDefinition Parents Children Used by SchemaDefinition","title":"Slot: default_range"},{"location":"default_range/#slot-default_range","text":"default slot range to be used if range element is omitted from a slot definition URI: linkml:default_range","title":"Slot: default_range"},{"location":"default_range/#domain-and-range","text":"SchemaDefinition \u2192 0..1 TypeDefinition","title":"Domain and Range"},{"location":"default_range/#parents","text":"","title":"Parents"},{"location":"default_range/#children","text":"","title":"Children"},{"location":"default_range/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"defining_slots/","text":"Slot: defining_slots The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom URI: linkml:defining_slots Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition","title":"Slot: defining_slots"},{"location":"defining_slots/#slot-defining_slots","text":"The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom URI: linkml:defining_slots","title":"Slot: defining_slots"},{"location":"defining_slots/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"defining_slots/#parents","text":"","title":"Parents"},{"location":"defining_slots/#children","text":"","title":"Children"},{"location":"defining_slots/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"definition_uri/","text":"Slot: definition_uri the \"native\" URI of the element URI: linkml:definition_uri Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Comments: Formed by combining the default_prefix with the mangled element","title":"Slot: definition_uri"},{"location":"definition_uri/#slot-definition_uri","text":"the \"native\" URI of the element URI: linkml:definition_uri","title":"Slot: definition_uri"},{"location":"definition_uri/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"definition_uri/#parents","text":"","title":"Parents"},{"location":"definition_uri/#children","text":"","title":"Children"},{"location":"definition_uri/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"definition_uri/#other-properties","text":"Comments: Formed by combining the default_prefix with the mangled element","title":"Other properties"},{"location":"deprecated/","text":"Slot: deprecated Description of why and when this element will no longer be used URI: linkml:deprecated Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: deprecated"},{"location":"deprecated/#slot-deprecated","text":"Description of why and when this element will no longer be used URI: linkml:deprecated","title":"Slot: deprecated"},{"location":"deprecated/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"deprecated/#parents","text":"","title":"Parents"},{"location":"deprecated/#children","text":"","title":"Children"},{"location":"deprecated/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"deprecated_element_has_exact_replacement/","text":"Slot: deprecated element has exact replacement When an element is deprecated, it can be automatically replaced by this uri or curie URI: linkml:deprecated_element_has_exact_replacement Domain and Range None \u2192 0..1 Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: IAO:0100001","title":"Slot: deprecated element has exact replacement"},{"location":"deprecated_element_has_exact_replacement/#slot-deprecated-element-has-exact-replacement","text":"When an element is deprecated, it can be automatically replaced by this uri or curie URI: linkml:deprecated_element_has_exact_replacement","title":"Slot: deprecated element has exact replacement"},{"location":"deprecated_element_has_exact_replacement/#domain-and-range","text":"None \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"deprecated_element_has_exact_replacement/#parents","text":"","title":"Parents"},{"location":"deprecated_element_has_exact_replacement/#children","text":"","title":"Children"},{"location":"deprecated_element_has_exact_replacement/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"deprecated_element_has_exact_replacement/#other-properties","text":"Mappings: IAO:0100001","title":"Other properties"},{"location":"deprecated_element_has_possible_replacement/","text":"Slot: deprecated element has possible replacement When an element is deprecated, it can be potentially replaced by this uri or curie URI: linkml:deprecated_element_has_possible_replacement Domain and Range None \u2192 0..1 Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: OIO:consider","title":"Slot: deprecated element has possible replacement"},{"location":"deprecated_element_has_possible_replacement/#slot-deprecated-element-has-possible-replacement","text":"When an element is deprecated, it can be potentially replaced by this uri or curie URI: linkml:deprecated_element_has_possible_replacement","title":"Slot: deprecated element has possible replacement"},{"location":"deprecated_element_has_possible_replacement/#domain-and-range","text":"None \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"deprecated_element_has_possible_replacement/#parents","text":"","title":"Parents"},{"location":"deprecated_element_has_possible_replacement/#children","text":"","title":"Children"},{"location":"deprecated_element_has_possible_replacement/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"deprecated_element_has_possible_replacement/#other-properties","text":"Mappings: OIO:consider","title":"Other properties"},{"location":"description/","text":"Slot: description a description of the element's purpose and use URI: linkml:description Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:definition In Subsets: owl","title":"Slot: description"},{"location":"description/#slot-description","text":"a description of the element's purpose and use URI: linkml:description","title":"Slot: description"},{"location":"description/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"description/#parents","text":"","title":"Parents"},{"location":"description/#children","text":"","title":"Children"},{"location":"description/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"description/#other-properties","text":"Mappings: skos:definition In Subsets: owl","title":"Other properties"},{"location":"designates_type/","text":"Slot: designates_type True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition URI: linkml:designates_type Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Aliases: type designator","title":"Slot: designates_type"},{"location":"designates_type/#slot-designates_type","text":"True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition URI: linkml:designates_type","title":"Slot: designates_type"},{"location":"designates_type/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"designates_type/#parents","text":"","title":"Parents"},{"location":"designates_type/#children","text":"","title":"Children"},{"location":"designates_type/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"designates_type/#other-properties","text":"Aliases: type designator","title":"Other properties"},{"location":"domain/","text":"Slot: domain defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 URI: linkml:domain Domain and Range SlotDefinition \u2192 0..1 ClassDefinition Parents Children Used by SlotDefinition","title":"Slot: domain"},{"location":"domain/#slot-domain","text":"defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 URI: linkml:domain","title":"Slot: domain"},{"location":"domain/#domain-and-range","text":"SlotDefinition \u2192 0..1 ClassDefinition","title":"Domain and Range"},{"location":"domain/#parents","text":"","title":"Parents"},{"location":"domain/#children","text":"","title":"Children"},{"location":"domain/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"domain_of/","text":"Slot: domain_of the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context URI: linkml:domain_of Domain and Range SlotDefinition \u2192 0..* ClassDefinition Parents Children Used by SlotDefinition","title":"Slot: domain_of"},{"location":"domain_of/#slot-domain_of","text":"the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context URI: linkml:domain_of","title":"Slot: domain_of"},{"location":"domain_of/#domain-and-range","text":"SlotDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"domain_of/#parents","text":"","title":"Parents"},{"location":"domain_of/#children","text":"","title":"Children"},{"location":"domain_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"elseconditions/","text":"Slot: elseconditions an expression that must hold for an instance of the class, if the preconditions no not hold URI: linkml:elseconditions Domain and Range None \u2192 0..1 AnonymousClassExpression Parents Children Used by ClassRule Other properties Aliases: else","title":"Slot: elseconditions"},{"location":"elseconditions/#slot-elseconditions","text":"an expression that must hold for an instance of the class, if the preconditions no not hold URI: linkml:elseconditions","title":"Slot: elseconditions"},{"location":"elseconditions/#domain-and-range","text":"None \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"elseconditions/#parents","text":"","title":"Parents"},{"location":"elseconditions/#children","text":"","title":"Children"},{"location":"elseconditions/#used-by","text":"ClassRule","title":"Used by"},{"location":"elseconditions/#other-properties","text":"Aliases: else","title":"Other properties"},{"location":"emit_prefixes/","text":"Slot: emit_prefixes a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. URI: linkml:emit_prefixes Domain and Range SchemaDefinition \u2192 0..* Ncname Parents Children Used by SchemaDefinition","title":"Slot: emit_prefixes"},{"location":"emit_prefixes/#slot-emit_prefixes","text":"a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. URI: linkml:emit_prefixes","title":"Slot: emit_prefixes"},{"location":"emit_prefixes/#domain-and-range","text":"SchemaDefinition \u2192 0..* Ncname","title":"Domain and Range"},{"location":"emit_prefixes/#parents","text":"","title":"Parents"},{"location":"emit_prefixes/#children","text":"","title":"Children"},{"location":"emit_prefixes/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"enums/","text":"Slot: enums enumerated ranges URI: linkml:enums Domain and Range SchemaDefinition \u2192 0..* EnumDefinition Parents Children Used by SchemaDefinition","title":"Slot: enums"},{"location":"enums/#slot-enums","text":"enumerated ranges URI: linkml:enums","title":"Slot: enums"},{"location":"enums/#domain-and-range","text":"SchemaDefinition \u2192 0..* EnumDefinition","title":"Domain and Range"},{"location":"enums/#parents","text":"","title":"Parents"},{"location":"enums/#children","text":"","title":"Children"},{"location":"enums/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"equals_expression/","text":"Slot: equals_expression the value of the slot must equal the value of the evaluated expression URI: linkml:equals_expression Domain and Range None \u2192 0..1 String Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Comments: for example, a 'length' slot may have an equals_expression with value '(end-start)+1' See also: https://github.com/linkml/linkml/issues/75","title":"Slot: equals_expression"},{"location":"equals_expression/#slot-equals_expression","text":"the value of the slot must equal the value of the evaluated expression URI: linkml:equals_expression","title":"Slot: equals_expression"},{"location":"equals_expression/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"equals_expression/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"equals_expression/#children","text":"","title":"Children"},{"location":"equals_expression/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"equals_expression/#other-properties","text":"Comments: for example, a 'length' slot may have an equals_expression with value '(end-start)+1' See also: https://github.com/linkml/linkml/issues/75","title":"Other properties"},{"location":"equals_number/","text":"Slot: equals_number the slot must have range of a number and the value of the slot must equal the specified value URI: linkml:equals_number Domain and Range None \u2192 0..1 Integer Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: equals_number"},{"location":"equals_number/#slot-equals_number","text":"the slot must have range of a number and the value of the slot must equal the specified value URI: linkml:equals_number","title":"Slot: equals_number"},{"location":"equals_number/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"equals_number/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"equals_number/#children","text":"","title":"Children"},{"location":"equals_number/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"equals_number_in/","text":"Slot: equals_number_in the slot must have range number and the value of the slot must equal one of the specified values URI: linkml:equals_number_in Domain and Range None \u2192 0..* Integer Parents is_a: list_value_specification_constant Children Used by","title":"Slot: equals_number_in"},{"location":"equals_number_in/#slot-equals_number_in","text":"the slot must have range number and the value of the slot must equal one of the specified values URI: linkml:equals_number_in","title":"Slot: equals_number_in"},{"location":"equals_number_in/#domain-and-range","text":"None \u2192 0..* Integer","title":"Domain and Range"},{"location":"equals_number_in/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"equals_number_in/#children","text":"","title":"Children"},{"location":"equals_number_in/#used-by","text":"","title":"Used by"},{"location":"equals_string/","text":"Slot: equals_string the slot must have range string and the value of the slot must equal the specified value URI: linkml:equals_string Domain and Range None \u2192 0..1 String Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: equals_string"},{"location":"equals_string/#slot-equals_string","text":"the slot must have range string and the value of the slot must equal the specified value URI: linkml:equals_string","title":"Slot: equals_string"},{"location":"equals_string/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"equals_string/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"equals_string/#children","text":"","title":"Children"},{"location":"equals_string/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"equals_string_in/","text":"Slot: equals_string_in the slot must have range string and the value of the slot must equal one of the specified values URI: linkml:equals_string_in Domain and Range None \u2192 0..* String Parents is_a: list_value_specification_constant Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: equals_string_in"},{"location":"equals_string_in/#slot-equals_string_in","text":"the slot must have range string and the value of the slot must equal one of the specified values URI: linkml:equals_string_in","title":"Slot: equals_string_in"},{"location":"equals_string_in/#domain-and-range","text":"None \u2192 0..* String","title":"Domain and Range"},{"location":"equals_string_in/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"equals_string_in/#children","text":"","title":"Children"},{"location":"equals_string_in/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"exact_mappings/","text":"Slot: exact mappings A list of terms from different schemas or terminology systems that have identical meaning. URI: linkml:exact_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:exactMatch","title":"Slot: exact mappings"},{"location":"exact_mappings/#slot-exact-mappings","text":"A list of terms from different schemas or terminology systems that have identical meaning. URI: linkml:exact_mappings","title":"Slot: exact mappings"},{"location":"exact_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"exact_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"exact_mappings/#children","text":"","title":"Children"},{"location":"exact_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"exact_mappings/#other-properties","text":"Mappings: skos:exactMatch","title":"Other properties"},{"location":"exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:exactly_one_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of Used by Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:exactly_one_of","title":"Slot: exactly_one_of"},{"location":"exactly_one_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"exactly_one_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"exactly_one_of/#children","text":"class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of","title":"Children"},{"location":"exactly_one_of/#used-by","text":"","title":"Used by"},{"location":"exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"examples/","text":"Slot: examples example usages of an element URI: linkml:examples Domain and Range Element \u2192 0..* Example Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties In Subsets: owl","title":"Slot: examples"},{"location":"examples/#slot-examples","text":"example usages of an element URI: linkml:examples","title":"Slot: examples"},{"location":"examples/#domain-and-range","text":"Element \u2192 0..* Example","title":"Domain and Range"},{"location":"examples/#parents","text":"","title":"Parents"},{"location":"examples/#children","text":"","title":"Children"},{"location":"examples/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"examples/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"extension_tag/","text":"Slot: tag a tag associated with an extension URI: linkml:extension_tag Domain and Range Extension \u2192 1..1 Uriorcurie Parents Children Used by Annotation Extension","title":"Slot: tag"},{"location":"extension_tag/#slot-tag","text":"a tag associated with an extension URI: linkml:extension_tag","title":"Slot: tag"},{"location":"extension_tag/#domain-and-range","text":"Extension \u2192 1..1 Uriorcurie","title":"Domain and Range"},{"location":"extension_tag/#parents","text":"","title":"Parents"},{"location":"extension_tag/#children","text":"","title":"Children"},{"location":"extension_tag/#used-by","text":"Annotation Extension","title":"Used by"},{"location":"extension_value/","text":"Slot: value the actual annotation URI: linkml:extension_value Domain and Range Extension \u2192 1..1 String Parents Children Used by Annotation Extension","title":"Slot: value"},{"location":"extension_value/#slot-value","text":"the actual annotation URI: linkml:extension_value","title":"Slot: value"},{"location":"extension_value/#domain-and-range","text":"Extension \u2192 1..1 String","title":"Domain and Range"},{"location":"extension_value/#parents","text":"","title":"Parents"},{"location":"extension_value/#children","text":"","title":"Children"},{"location":"extension_value/#used-by","text":"Annotation Extension","title":"Used by"},{"location":"extensions/","text":"Slot: extensions a tag/text tuple attached to an arbitrary element URI: linkml:extensions Domain and Range Extensible \u2192 0..* Extension Parents Children annotations Used by Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition Extensible Extension PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: extensions"},{"location":"extensions/#slot-extensions","text":"a tag/text tuple attached to an arbitrary element URI: linkml:extensions","title":"Slot: extensions"},{"location":"extensions/#domain-and-range","text":"Extensible \u2192 0..* Extension","title":"Domain and Range"},{"location":"extensions/#parents","text":"","title":"Parents"},{"location":"extensions/#children","text":"annotations","title":"Children"},{"location":"extensions/#used-by","text":"Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition Extensible Extension PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"followed_by/","text":"Slot: followed_by in a sequential list, this indicates the next member URI: linkml:followed_by Domain and Range None \u2192 0..1 Expression Parents Children path_expression\u279efollowed_by Used by","title":"Slot: followed_by"},{"location":"followed_by/#slot-followed_by","text":"in a sequential list, this indicates the next member URI: linkml:followed_by","title":"Slot: followed_by"},{"location":"followed_by/#domain-and-range","text":"None \u2192 0..1 Expression","title":"Domain and Range"},{"location":"followed_by/#parents","text":"","title":"Parents"},{"location":"followed_by/#children","text":"path_expression\u279efollowed_by","title":"Children"},{"location":"followed_by/#used-by","text":"","title":"Used by"},{"location":"from_schema/","text":"Slot: from_schema id of the schema that defined the element URI: linkml:from_schema Domain and Range Element \u2192 0..1 Uri Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:inScheme","title":"Slot: from_schema"},{"location":"from_schema/#slot-from_schema","text":"id of the schema that defined the element URI: linkml:from_schema","title":"Slot: from_schema"},{"location":"from_schema/#domain-and-range","text":"Element \u2192 0..1 Uri","title":"Domain and Range"},{"location":"from_schema/#parents","text":"","title":"Parents"},{"location":"from_schema/#children","text":"","title":"Children"},{"location":"from_schema/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"from_schema/#other-properties","text":"Mappings: skos:inScheme","title":"Other properties"},{"location":"generation_date/","text":"Slot: generation_date date and time that the schema was loaded/generated URI: linkml:generation_date Domain and Range SchemaDefinition \u2192 0..1 Datetime Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: generation_date"},{"location":"generation_date/#slot-generation_date","text":"date and time that the schema was loaded/generated URI: linkml:generation_date","title":"Slot: generation_date"},{"location":"generation_date/#domain-and-range","text":"SchemaDefinition \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"generation_date/#parents","text":"","title":"Parents"},{"location":"generation_date/#children","text":"","title":"Children"},{"location":"generation_date/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"generation_date/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"has_member/","text":"Slot: has_member the values of the slot is multivalued with at least one member satisfying the condition URI: linkml:has_member Domain and Range None \u2192 0..1 AnonymousSlotExpression Parents is_a: list_value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: has_member"},{"location":"has_member/#slot-has_member","text":"the values of the slot is multivalued with at least one member satisfying the condition URI: linkml:has_member","title":"Slot: has_member"},{"location":"has_member/#domain-and-range","text":"None \u2192 0..1 AnonymousSlotExpression","title":"Domain and Range"},{"location":"has_member/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"has_member/#children","text":"","title":"Children"},{"location":"has_member/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"home/","text":"Introduction Welcome to the LinkML metamodel reference guide. For full documentation see linkml.io/linkml/ .","title":"Home"},{"location":"home/#introduction","text":"Welcome to the LinkML metamodel reference guide. For full documentation see linkml.io/linkml/ .","title":"Introduction"},{"location":"id/","text":"Slot: id The official schema URI URI: linkml:id Domain and Range SchemaDefinition \u2192 1..1 Uri Parents Children Used by SchemaDefinition","title":"Slot: id"},{"location":"id/#slot-id","text":"The official schema URI URI: linkml:id","title":"Slot: id"},{"location":"id/#domain-and-range","text":"SchemaDefinition \u2192 1..1 Uri","title":"Domain and Range"},{"location":"id/#parents","text":"","title":"Parents"},{"location":"id/#children","text":"","title":"Children"},{"location":"id/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"id_prefixes/","text":"Slot: id_prefixes the identifier of this class or slot must begin with the URIs referenced by this prefix URI: linkml:id_prefixes Domain and Range Element \u2192 0..* Ncname Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Comments: Order of elements may be used to indicate priority order If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by : ( should start if the list is open) If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix ( should start if the list is open) See also: https://github.com/linkml/linkml/issues/194 https://github.com/linkml/linkml-model/issues/28","title":"Slot: id_prefixes"},{"location":"id_prefixes/#slot-id_prefixes","text":"the identifier of this class or slot must begin with the URIs referenced by this prefix URI: linkml:id_prefixes","title":"Slot: id_prefixes"},{"location":"id_prefixes/#domain-and-range","text":"Element \u2192 0..* Ncname","title":"Domain and Range"},{"location":"id_prefixes/#parents","text":"","title":"Parents"},{"location":"id_prefixes/#children","text":"","title":"Children"},{"location":"id_prefixes/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"id_prefixes/#other-properties","text":"Comments: Order of elements may be used to indicate priority order If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by : ( should start if the list is open) If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix ( should start if the list is open) See also: https://github.com/linkml/linkml/issues/194 https://github.com/linkml/linkml-model/issues/28","title":"Other properties"},{"location":"identifier/","text":"Slot: identifier True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container URI: linkml:identifier Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Aliases: primary key ID UID code Comments: identifier is inherited a key slot is automatically required. Identifiers cannot be optional a given domain can have at most one identifier identifiers and keys are mutually exclusive. A given domain cannot have both See also: https://en.wikipedia.org/wiki/Identifier","title":"Slot: identifier"},{"location":"identifier/#slot-identifier","text":"True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container URI: linkml:identifier","title":"Slot: identifier"},{"location":"identifier/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"identifier/#parents","text":"","title":"Parents"},{"location":"identifier/#children","text":"","title":"Children"},{"location":"identifier/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"identifier/#other-properties","text":"Aliases: primary key ID UID code Comments: identifier is inherited a key slot is automatically required. Identifiers cannot be optional a given domain can have at most one identifier identifiers and keys are mutually exclusive. A given domain cannot have both See also: https://en.wikipedia.org/wiki/Identifier","title":"Other properties"},{"location":"ifabsent/","text":"Slot: ifabsent function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: * [Tt]rue -- boolean True * [Ff]alse -- boolean False * int(value) -- integer value * str(value) -- string value * default_range -- schema default range * bnode -- blank node identifier * slot_uri -- URI for the slot * class_curie -- CURIE for the containing class * class_uri -- URI for the containing class URI: linkml:ifabsent Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition Other properties Close Mappings: sh:defaultValue","title":"Slot: ifabsent"},{"location":"ifabsent/#slot-ifabsent","text":"function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: * [Tt]rue -- boolean True * [Ff]alse -- boolean False * int(value) -- integer value * str(value) -- string value * default_range -- schema default range * bnode -- blank node identifier * slot_uri -- URI for the slot * class_curie -- CURIE for the containing class * class_uri -- URI for the containing class URI: linkml:ifabsent","title":"Slot: ifabsent"},{"location":"ifabsent/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"ifabsent/#parents","text":"","title":"Parents"},{"location":"ifabsent/#children","text":"","title":"Children"},{"location":"ifabsent/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"ifabsent/#other-properties","text":"Close Mappings: sh:defaultValue","title":"Other properties"},{"location":"imported_from/","text":"Slot: imported_from the imports entry that this element was derived from. Empty means primary source URI: linkml:imported_from Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: imported_from"},{"location":"imported_from/#slot-imported_from","text":"the imports entry that this element was derived from. Empty means primary source URI: linkml:imported_from","title":"Slot: imported_from"},{"location":"imported_from/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"imported_from/#parents","text":"","title":"Parents"},{"location":"imported_from/#children","text":"","title":"Children"},{"location":"imported_from/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"imports/","text":"Slot: imports other schemas that are included in this schema URI: linkml:imports Domain and Range SchemaDefinition \u2192 0..* Uriorcurie Parents Children Used by SchemaDefinition","title":"Slot: imports"},{"location":"imports/#slot-imports","text":"other schemas that are included in this schema URI: linkml:imports","title":"Slot: imports"},{"location":"imports/#domain-and-range","text":"SchemaDefinition \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"imports/#parents","text":"","title":"Parents"},{"location":"imports/#children","text":"","title":"Children"},{"location":"imports/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"in_subset/","text":"Slot: in_subset used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) URI: linkml:in_subset Domain and Range Element \u2192 0..* SubsetDefinition Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: OIO:inSubset","title":"Slot: in_subset"},{"location":"in_subset/#slot-in_subset","text":"used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) URI: linkml:in_subset","title":"Slot: in_subset"},{"location":"in_subset/#domain-and-range","text":"Element \u2192 0..* SubsetDefinition","title":"Domain and Range"},{"location":"in_subset/#parents","text":"","title":"Parents"},{"location":"in_subset/#children","text":"","title":"Children"},{"location":"in_subset/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"in_subset/#other-properties","text":"Mappings: OIO:inSubset","title":"Other properties"},{"location":"inherited/","text":"Slot: inherited true means that the value of a slot is inherited by subclasses URI: linkml:inherited Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: Inherited applies to slot values. Parent slots are always inherited by subclasses","title":"Slot: inherited"},{"location":"inherited/#slot-inherited","text":"true means that the value of a slot is inherited by subclasses URI: linkml:inherited","title":"Slot: inherited"},{"location":"inherited/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"inherited/#parents","text":"","title":"Parents"},{"location":"inherited/#children","text":"","title":"Children"},{"location":"inherited/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inherited/#other-properties","text":"Comments: Inherited applies to slot values. Parent slots are always inherited by subclasses","title":"Other properties"},{"location":"inlined/","text":"Slot: inlined True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. URI: linkml:inlined Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: classes without keys or identifiers are necessarily inlined as lists","title":"Slot: inlined"},{"location":"inlined/#slot-inlined","text":"True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. URI: linkml:inlined","title":"Slot: inlined"},{"location":"inlined/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"inlined/#parents","text":"","title":"Parents"},{"location":"inlined/#children","text":"","title":"Children"},{"location":"inlined/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inlined/#other-properties","text":"Comments: classes without keys or identifiers are necessarily inlined as lists","title":"Other properties"},{"location":"inlined_as_list/","text":"Slot: inlined_as_list True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. URI: linkml:inlined_as_list Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: The default loader will accept either list or dictionary form as input. This parameter controls internal representation and output. A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key is the key or identifier and whose value is the one additional element. This form is still stored according to the inlined_as_list setting.","title":"Slot: inlined_as_list"},{"location":"inlined_as_list/#slot-inlined_as_list","text":"True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. URI: linkml:inlined_as_list","title":"Slot: inlined_as_list"},{"location":"inlined_as_list/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"inlined_as_list/#parents","text":"","title":"Parents"},{"location":"inlined_as_list/#children","text":"","title":"Children"},{"location":"inlined_as_list/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inlined_as_list/#other-properties","text":"Comments: The default loader will accept either list or dictionary form as input. This parameter controls internal representation and output. A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key is the key or identifier and whose value is the one additional element. This form is still stored according to the inlined_as_list setting.","title":"Other properties"},{"location":"inverse/","text":"Slot: inverse indicates that any instance of d s r implies that there is also an instance of r s' d URI: linkml:inverse Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents Children Used by SlotDefinition Other properties Mappings: owl:inverseOf","title":"Slot: inverse"},{"location":"inverse/#slot-inverse","text":"indicates that any instance of d s r implies that there is also an instance of r s' d URI: linkml:inverse","title":"Slot: inverse"},{"location":"inverse/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"inverse/#parents","text":"","title":"Parents"},{"location":"inverse/#children","text":"","title":"Children"},{"location":"inverse/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inverse/#other-properties","text":"Mappings: owl:inverseOf","title":"Other properties"},{"location":"irreflexive/","text":"Slot: irreflexive If s is irreflexive, then there exists no i such i.s=i URI: linkml:irreflexive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition","title":"Slot: irreflexive"},{"location":"irreflexive/#slot-irreflexive","text":"If s is irreflexive, then there exists no i such i.s=i URI: linkml:irreflexive","title":"Slot: irreflexive"},{"location":"irreflexive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"irreflexive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"irreflexive/#children","text":"","title":"Children"},{"location":"irreflexive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:is_a Domain and Range Definition \u2192 0..1 Definition Parents Children class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a Used by AnonymousClassExpression Definition","title":"Slot: is_a"},{"location":"is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:is_a","title":"Slot: is_a"},{"location":"is_a/#domain-and-range","text":"Definition \u2192 0..1 Definition","title":"Domain and Range"},{"location":"is_a/#parents","text":"","title":"Parents"},{"location":"is_a/#children","text":"class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a","title":"Children"},{"location":"is_a/#used-by","text":"AnonymousClassExpression Definition","title":"Used by"},{"location":"is_class_field/","text":"Slot: is_class_field indicates that any instance, i, the domain of this slot will include an assert of i s range URI: linkml:is_class_field Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition","title":"Slot: is_class_field"},{"location":"is_class_field/#slot-is_class_field","text":"indicates that any instance, i, the domain of this slot will include an assert of i s range URI: linkml:is_class_field","title":"Slot: is_class_field"},{"location":"is_class_field/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"is_class_field/#parents","text":"","title":"Parents"},{"location":"is_class_field/#children","text":"","title":"Children"},{"location":"is_class_field/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"is_grouping_slot/","text":"Slot: is_grouping_slot true if this slot is a grouping slot URI: linkml:is_grouping_slot Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Close Mappings: sh:PropertyGroup","title":"Slot: is_grouping_slot"},{"location":"is_grouping_slot/#slot-is_grouping_slot","text":"true if this slot is a grouping slot URI: linkml:is_grouping_slot","title":"Slot: is_grouping_slot"},{"location":"is_grouping_slot/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"is_grouping_slot/#parents","text":"","title":"Parents"},{"location":"is_grouping_slot/#children","text":"","title":"Children"},{"location":"is_grouping_slot/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"is_grouping_slot/#other-properties","text":"Close Mappings: sh:PropertyGroup","title":"Other properties"},{"location":"is_usage_slot/","text":"Slot: ~~is_usage_slot~~ (deprecated) True means that this slot was defined in a slot_usage situation URI: linkml:is_usage_slot Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition","title":"Slot: ~~is_usage_slot~~ _(deprecated)_"},{"location":"is_usage_slot/#slot-is_usage_slot-deprecated","text":"True means that this slot was defined in a slot_usage situation URI: linkml:is_usage_slot","title":"Slot: ~~is_usage_slot~~ (deprecated)"},{"location":"is_usage_slot/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"is_usage_slot/#parents","text":"","title":"Parents"},{"location":"is_usage_slot/#children","text":"","title":"Children"},{"location":"is_usage_slot/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"key/","text":"Slot: key True means that the key slot(s) uniquely identify the container. URI: linkml:key Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: see also 'unique_key' key is inherited a given domain can have at most one key slot (restriction to be removed in the future) identifiers and keys are mutually exclusive. A given domain cannot have both a key slot is automatically required. Keys cannot be optional","title":"Slot: key"},{"location":"key/#slot-key","text":"True means that the key slot(s) uniquely identify the container. URI: linkml:key","title":"Slot: key"},{"location":"key/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"key/#parents","text":"","title":"Parents"},{"location":"key/#children","text":"","title":"Children"},{"location":"key/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"key/#other-properties","text":"Comments: see also 'unique_key' key is inherited a given domain can have at most one key slot (restriction to be removed in the future) identifiers and keys are mutually exclusive. A given domain cannot have both a key slot is automatically required. Keys cannot be optional","title":"Other properties"},{"location":"last_updated_on/","text":"Slot: last_updated_on time at which the element was last updated URI: linkml:last_updated_on Domain and Range Element \u2192 0..1 Datetime Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: pav:lastUpdatedOn","title":"Slot: last_updated_on"},{"location":"last_updated_on/#slot-last_updated_on","text":"time at which the element was last updated URI: linkml:last_updated_on","title":"Slot: last_updated_on"},{"location":"last_updated_on/#domain-and-range","text":"Element \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"last_updated_on/#parents","text":"","title":"Parents"},{"location":"last_updated_on/#children","text":"","title":"Children"},{"location":"last_updated_on/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"last_updated_on/#other-properties","text":"Mappings: pav:lastUpdatedOn","title":"Other properties"},{"location":"license/","text":"Slot: license license for the schema URI: linkml:license Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties Mappings: dcterms:license In Subsets: owl","title":"Slot: license"},{"location":"license/#slot-license","text":"license for the schema URI: linkml:license","title":"Slot: license"},{"location":"license/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"license/#parents","text":"","title":"Parents"},{"location":"license/#children","text":"","title":"Children"},{"location":"license/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"license/#other-properties","text":"Mappings: dcterms:license In Subsets: owl","title":"Other properties"},{"location":"list_value_specification_constant/","text":"Slot: list_value_specification_constant Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant URI: linkml:list_value_specification_constant Domain and Range None \u2192 0..1 String Parents Children all_members equals_number_in equals_string_in has_member Used by","title":"Slot: list_value_specification_constant"},{"location":"list_value_specification_constant/#slot-list_value_specification_constant","text":"Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant URI: linkml:list_value_specification_constant","title":"Slot: list_value_specification_constant"},{"location":"list_value_specification_constant/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"list_value_specification_constant/#parents","text":"","title":"Parents"},{"location":"list_value_specification_constant/#children","text":"all_members equals_number_in equals_string_in has_member","title":"Children"},{"location":"list_value_specification_constant/#used-by","text":"","title":"Used by"},{"location":"local_name_source/","text":"Slot: local_name_source the ncname of the source of the name URI: linkml:local_name_source Domain and Range LocalName \u2192 1..1 Ncname Parents Children Used by LocalName","title":"Slot: local_name_source"},{"location":"local_name_source/#slot-local_name_source","text":"the ncname of the source of the name URI: linkml:local_name_source","title":"Slot: local_name_source"},{"location":"local_name_source/#domain-and-range","text":"LocalName \u2192 1..1 Ncname","title":"Domain and Range"},{"location":"local_name_source/#parents","text":"","title":"Parents"},{"location":"local_name_source/#children","text":"","title":"Children"},{"location":"local_name_source/#used-by","text":"LocalName","title":"Used by"},{"location":"local_name_value/","text":"Slot: local_name_value a name assigned to an element in a given ontology URI: linkml:local_name_value Domain and Range LocalName \u2192 1..1 String Parents Children Used by LocalName Other properties Mappings: skos:altLabel","title":"Slot: local_name_value"},{"location":"local_name_value/#slot-local_name_value","text":"a name assigned to an element in a given ontology URI: linkml:local_name_value","title":"Slot: local_name_value"},{"location":"local_name_value/#domain-and-range","text":"LocalName \u2192 1..1 String","title":"Domain and Range"},{"location":"local_name_value/#parents","text":"","title":"Parents"},{"location":"local_name_value/#children","text":"","title":"Children"},{"location":"local_name_value/#used-by","text":"LocalName","title":"Used by"},{"location":"local_name_value/#other-properties","text":"Mappings: skos:altLabel","title":"Other properties"},{"location":"local_names/","text":"Slot: local_names URI: linkml:local_names Domain and Range Element \u2192 0..* LocalName Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Slot: local_names"},{"location":"local_names/#slot-local_names","text":"URI: linkml:local_names","title":"Slot: local_names"},{"location":"local_names/#domain-and-range","text":"Element \u2192 0..* LocalName","title":"Domain and Range"},{"location":"local_names/#parents","text":"","title":"Parents"},{"location":"local_names/#children","text":"","title":"Children"},{"location":"local_names/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"locally_reflexive/","text":"Slot: locally_reflexive If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i URI: linkml:locally_reflexive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition","title":"Slot: locally_reflexive"},{"location":"locally_reflexive/#slot-locally_reflexive","text":"If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i URI: linkml:locally_reflexive","title":"Slot: locally_reflexive"},{"location":"locally_reflexive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"locally_reflexive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"locally_reflexive/#children","text":"","title":"Children"},{"location":"locally_reflexive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"mappings/","text":"Slot: mappings A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. URI: linkml:mappings Domain and Range None \u2192 0..* Uriorcurie Parents Children broad mappings close mappings exact mappings narrow mappings related mappings Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:mappingRelation","title":"Slot: mappings"},{"location":"mappings/#slot-mappings","text":"A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. URI: linkml:mappings","title":"Slot: mappings"},{"location":"mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"mappings/#parents","text":"","title":"Parents"},{"location":"mappings/#children","text":"broad mappings close mappings exact mappings narrow mappings related mappings","title":"Children"},{"location":"mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"mappings/#other-properties","text":"Mappings: skos:mappingRelation","title":"Other properties"},{"location":"maximum_cardinality/","text":"Slot: maximum_cardinality the maximum number of entries for a multivalued slot URI: linkml:maximum_cardinality Domain and Range None \u2192 0..1 Integer Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: maximum_cardinality"},{"location":"maximum_cardinality/#slot-maximum_cardinality","text":"the maximum number of entries for a multivalued slot URI: linkml:maximum_cardinality","title":"Slot: maximum_cardinality"},{"location":"maximum_cardinality/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"maximum_cardinality/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"maximum_cardinality/#children","text":"","title":"Children"},{"location":"maximum_cardinality/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"maximum_value/","text":"Slot: maximum_value for slots with ranges of type number, the value must be equal to or lowe than this URI: linkml:maximum_value Domain and Range SlotDefinition \u2192 0..1 Integer Parents Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: maximum_value"},{"location":"maximum_value/#slot-maximum_value","text":"for slots with ranges of type number, the value must be equal to or lowe than this URI: linkml:maximum_value","title":"Slot: maximum_value"},{"location":"maximum_value/#domain-and-range","text":"SlotDefinition \u2192 0..1 Integer","title":"Domain and Range"},{"location":"maximum_value/#parents","text":"","title":"Parents"},{"location":"maximum_value/#children","text":"","title":"Children"},{"location":"maximum_value/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"meaning/","text":"Slot: meaning the value meaning (in the 11179 sense) of a permissible value URI: linkml:meaning Domain and Range PermissibleValue \u2192 0..1 Uriorcurie Parents Children Used by PermissibleValue","title":"Slot: meaning"},{"location":"meaning/#slot-meaning","text":"the value meaning (in the 11179 sense) of a permissible value URI: linkml:meaning","title":"Slot: meaning"},{"location":"meaning/#domain-and-range","text":"PermissibleValue \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"meaning/#parents","text":"","title":"Parents"},{"location":"meaning/#children","text":"","title":"Children"},{"location":"meaning/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"metamodel_version/","text":"Slot: metamodel_version Version of the metamodel used to load the schema URI: linkml:metamodel_version Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: metamodel_version"},{"location":"metamodel_version/#slot-metamodel_version","text":"Version of the metamodel used to load the schema URI: linkml:metamodel_version","title":"Slot: metamodel_version"},{"location":"metamodel_version/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"metamodel_version/#parents","text":"","title":"Parents"},{"location":"metamodel_version/#children","text":"","title":"Children"},{"location":"metamodel_version/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"metamodel_version/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"minimum_cardinality/","text":"Slot: minimum_cardinality the minimum number of entries for a multivalued slot URI: linkml:minimum_cardinality Domain and Range None \u2192 0..1 Integer Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: minimum_cardinality"},{"location":"minimum_cardinality/#slot-minimum_cardinality","text":"the minimum number of entries for a multivalued slot URI: linkml:minimum_cardinality","title":"Slot: minimum_cardinality"},{"location":"minimum_cardinality/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"minimum_cardinality/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"minimum_cardinality/#children","text":"","title":"Children"},{"location":"minimum_cardinality/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"minimum_value/","text":"Slot: minimum_value for slots with ranges of type number, the value must be equal to or higher than this URI: linkml:minimum_value Domain and Range SlotDefinition \u2192 0..1 Integer Parents Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: minimum_value"},{"location":"minimum_value/#slot-minimum_value","text":"for slots with ranges of type number, the value must be equal to or higher than this URI: linkml:minimum_value","title":"Slot: minimum_value"},{"location":"minimum_value/#domain-and-range","text":"SlotDefinition \u2192 0..1 Integer","title":"Domain and Range"},{"location":"minimum_value/#parents","text":"","title":"Parents"},{"location":"minimum_value/#children","text":"","title":"Children"},{"location":"minimum_value/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"mixin/","text":"Slot: mixin this slot or class can only be used as a mixin. URI: linkml:mixin Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Aliases: trait See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixin"},{"location":"mixin/#slot-mixin","text":"this slot or class can only be used as a mixin. URI: linkml:mixin","title":"Slot: mixin"},{"location":"mixin/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"mixin/#parents","text":"","title":"Parents"},{"location":"mixin/#children","text":"","title":"Children"},{"location":"mixin/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"mixin/#other-properties","text":"Aliases: trait See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:mixins Domain and Range Definition \u2192 0..* Definition Parents Children class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins Used by Definition Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:mixins","title":"Slot: mixins"},{"location":"mixins/#domain-and-range","text":"Definition \u2192 0..* Definition","title":"Domain and Range"},{"location":"mixins/#parents","text":"","title":"Parents"},{"location":"mixins/#children","text":"class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins","title":"Children"},{"location":"mixins/#used-by","text":"Definition","title":"Used by"},{"location":"mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"modified_by/","text":"Slot: modified_by agent that modified the element URI: linkml:modified_by Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: oslc:modifiedBy","title":"Slot: modified_by"},{"location":"modified_by/#slot-modified_by","text":"agent that modified the element URI: linkml:modified_by","title":"Slot: modified_by"},{"location":"modified_by/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"modified_by/#parents","text":"","title":"Parents"},{"location":"modified_by/#children","text":"","title":"Children"},{"location":"modified_by/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"modified_by/#other-properties","text":"Mappings: oslc:modifiedBy","title":"Other properties"},{"location":"multivalued/","text":"Slot: multivalued true means that slot can have more than one value URI: linkml:multivalued Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition","title":"Slot: multivalued"},{"location":"multivalued/#slot-multivalued","text":"true means that slot can have more than one value URI: linkml:multivalued","title":"Slot: multivalued"},{"location":"multivalued/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"multivalued/#parents","text":"","title":"Parents"},{"location":"multivalued/#children","text":"","title":"Children"},{"location":"multivalued/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"name/","text":"Slot: name the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:name Domain and Range Element \u2192 1..1 String Parents Children schema_definition\u279ename Used by ClassDefinition Definition Element EnumDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Slot: name"},{"location":"name/#slot-name","text":"the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:name","title":"Slot: name"},{"location":"name/#domain-and-range","text":"Element \u2192 1..1 String","title":"Domain and Range"},{"location":"name/#parents","text":"","title":"Parents"},{"location":"name/#children","text":"schema_definition\u279ename","title":"Children"},{"location":"name/#used-by","text":"ClassDefinition Definition Element EnumDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"name/#other-properties","text":"Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Other properties"},{"location":"narrow_mappings/","text":"Slot: narrow mappings A list of terms from different schemas or terminology systems that have narrower meaning. URI: linkml:narrow_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:narrowMatch","title":"Slot: narrow mappings"},{"location":"narrow_mappings/#slot-narrow-mappings","text":"A list of terms from different schemas or terminology systems that have narrower meaning. URI: linkml:narrow_mappings","title":"Slot: narrow mappings"},{"location":"narrow_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"narrow_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"narrow_mappings/#children","text":"","title":"Children"},{"location":"narrow_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"narrow_mappings/#other-properties","text":"Mappings: skos:narrowMatch","title":"Other properties"},{"location":"none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:none_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of Used by Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:none_of","title":"Slot: none_of"},{"location":"none_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"none_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"none_of/#children","text":"class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of","title":"Children"},{"location":"none_of/#used-by","text":"","title":"Used by"},{"location":"none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"notes/","text":"Slot: notes editorial notes about an element intended for internal consumption URI: linkml:notes Domain and Range Element \u2192 0..* String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:editorialNote In Subsets: owl","title":"Slot: notes"},{"location":"notes/#slot-notes","text":"editorial notes about an element intended for internal consumption URI: linkml:notes","title":"Slot: notes"},{"location":"notes/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"notes/#parents","text":"","title":"Parents"},{"location":"notes/#children","text":"","title":"Children"},{"location":"notes/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"notes/#other-properties","text":"Mappings: skos:editorialNote In Subsets: owl","title":"Other properties"},{"location":"open_world/","text":"Slot: open_world if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these URI: linkml:open_world Domain and Range None \u2192 0..1 Boolean Parents Children Used by ClassRule","title":"Slot: open_world"},{"location":"open_world/#slot-open_world","text":"if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these URI: linkml:open_world","title":"Slot: open_world"},{"location":"open_world/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"open_world/#parents","text":"","title":"Parents"},{"location":"open_world/#children","text":"","title":"Children"},{"location":"open_world/#used-by","text":"ClassRule","title":"Used by"},{"location":"owner/","text":"Slot: ~~owner~~ (deprecated) the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot URI: linkml:owner Domain and Range SlotDefinition \u2192 0..1 Definition Parents Children Used by SlotDefinition","title":"Slot: ~~owner~~ _(deprecated)_"},{"location":"owner/#slot-owner-deprecated","text":"the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot URI: linkml:owner","title":"Slot: ~~owner~~ (deprecated)"},{"location":"owner/#domain-and-range","text":"SlotDefinition \u2192 0..1 Definition","title":"Domain and Range"},{"location":"owner/#parents","text":"","title":"Parents"},{"location":"owner/#children","text":"","title":"Children"},{"location":"owner/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"path_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:path_expression_all_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: all_of Children Used by PathExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"path_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:path_expression_all_of","title":"Slot: all_of"},{"location":"path_expression_all_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"path_expression_all_of/#children","text":"","title":"Children"},{"location":"path_expression_all_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"path_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:path_expression_any_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: any_of Children Used by PathExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"path_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:path_expression_any_of","title":"Slot: any_of"},{"location":"path_expression_any_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"path_expression_any_of/#children","text":"","title":"Children"},{"location":"path_expression_any_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"path_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:path_expression_exactly_one_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: exactly_one_of Children Used by PathExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"path_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:path_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"path_expression_exactly_one_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"path_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"path_expression_exactly_one_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"path_expression_followed_by/","text":"Slot: followed_by in a sequential list, this indicates the next member URI: linkml:path_expression_followed_by Domain and Range PathExpression \u2192 0..1 PathExpression Parents is_a: followed_by Children Used by PathExpression","title":"Slot: followed_by"},{"location":"path_expression_followed_by/#slot-followed_by","text":"in a sequential list, this indicates the next member URI: linkml:path_expression_followed_by","title":"Slot: followed_by"},{"location":"path_expression_followed_by/#domain-and-range","text":"PathExpression \u2192 0..1 PathExpression","title":"Domain and Range"},{"location":"path_expression_followed_by/#parents","text":"is_a: followed_by","title":"Parents"},{"location":"path_expression_followed_by/#children","text":"","title":"Children"},{"location":"path_expression_followed_by/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:path_expression_none_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: none_of Children Used by PathExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"path_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:path_expression_none_of","title":"Slot: none_of"},{"location":"path_expression_none_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"path_expression_none_of/#children","text":"","title":"Children"},{"location":"path_expression_none_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"path_rule/","text":"Slot: path_rule a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts URI: linkml:path_rule Domain and Range SlotDefinition \u2192 0..1 PathExpression Parents Children Used by SlotDefinition","title":"Slot: path_rule"},{"location":"path_rule/#slot-path_rule","text":"a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts URI: linkml:path_rule","title":"Slot: path_rule"},{"location":"path_rule/#domain-and-range","text":"SlotDefinition \u2192 0..1 PathExpression","title":"Domain and Range"},{"location":"path_rule/#parents","text":"","title":"Parents"},{"location":"path_rule/#children","text":"","title":"Children"},{"location":"path_rule/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"pattern/","text":"Slot: pattern the string value of the slot must conform to this regular expression URI: linkml:pattern Domain and Range Definition \u2192 0..1 String Parents Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: pattern"},{"location":"pattern/#slot-pattern","text":"the string value of the slot must conform to this regular expression URI: linkml:pattern","title":"Slot: pattern"},{"location":"pattern/#domain-and-range","text":"Definition \u2192 0..1 String","title":"Domain and Range"},{"location":"pattern/#parents","text":"","title":"Parents"},{"location":"pattern/#children","text":"","title":"Children"},{"location":"pattern/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"permissible_value_is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:permissible_value_is_a Domain and Range PermissibleValue \u2192 0..1 PermissibleValue Parents is_a: is_a Children Used by PermissibleValue","title":"Slot: is_a"},{"location":"permissible_value_is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:permissible_value_is_a","title":"Slot: is_a"},{"location":"permissible_value_is_a/#domain-and-range","text":"PermissibleValue \u2192 0..1 PermissibleValue","title":"Domain and Range"},{"location":"permissible_value_is_a/#parents","text":"is_a: is_a","title":"Parents"},{"location":"permissible_value_is_a/#children","text":"","title":"Children"},{"location":"permissible_value_is_a/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"permissible_value_mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:permissible_value_mixins Domain and Range PermissibleValue \u2192 0..* PermissibleValue Parents is_a: mixins Children Used by PermissibleValue Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"permissible_value_mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:permissible_value_mixins","title":"Slot: mixins"},{"location":"permissible_value_mixins/#domain-and-range","text":"PermissibleValue \u2192 0..* PermissibleValue","title":"Domain and Range"},{"location":"permissible_value_mixins/#parents","text":"is_a: mixins","title":"Parents"},{"location":"permissible_value_mixins/#children","text":"","title":"Children"},{"location":"permissible_value_mixins/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"permissible_value_mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"permissible_values/","text":"Slot: permissible_values A list of possible values for a slot range URI: linkml:permissible_values Domain and Range EnumDefinition \u2192 0..* PermissibleValue Parents Children Used by EnumDefinition","title":"Slot: permissible_values"},{"location":"permissible_values/#slot-permissible_values","text":"A list of possible values for a slot range URI: linkml:permissible_values","title":"Slot: permissible_values"},{"location":"permissible_values/#domain-and-range","text":"EnumDefinition \u2192 0..* PermissibleValue","title":"Domain and Range"},{"location":"permissible_values/#parents","text":"","title":"Parents"},{"location":"permissible_values/#children","text":"","title":"Children"},{"location":"permissible_values/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"postconditions/","text":"Slot: postconditions an expression that must hold for an instance of the class, if the preconditions hold URI: linkml:postconditions Domain and Range None \u2192 0..1 AnonymousClassExpression Parents Children Used by ClassRule Other properties Aliases: then head consequents Close Mappings: swrl:body","title":"Slot: postconditions"},{"location":"postconditions/#slot-postconditions","text":"an expression that must hold for an instance of the class, if the preconditions hold URI: linkml:postconditions","title":"Slot: postconditions"},{"location":"postconditions/#domain-and-range","text":"None \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"postconditions/#parents","text":"","title":"Parents"},{"location":"postconditions/#children","text":"","title":"Children"},{"location":"postconditions/#used-by","text":"ClassRule","title":"Used by"},{"location":"postconditions/#other-properties","text":"Aliases: then head consequents Close Mappings: swrl:body","title":"Other properties"},{"location":"precedence/","text":"Slot: precedence the relative order in which the element occurs URI: linkml:precedence Domain and Range None \u2192 0..1 Integer Parents Children Used by ClassDefinition ClassRule Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: sh:order","title":"Slot: precedence"},{"location":"precedence/#slot-precedence","text":"the relative order in which the element occurs URI: linkml:precedence","title":"Slot: precedence"},{"location":"precedence/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"precedence/#parents","text":"","title":"Parents"},{"location":"precedence/#children","text":"","title":"Children"},{"location":"precedence/#used-by","text":"ClassDefinition ClassRule Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"precedence/#other-properties","text":"Mappings: sh:order","title":"Other properties"},{"location":"preconditions/","text":"Slot: preconditions an expression that must hold in order for the rule to be applicable to an instance URI: linkml:preconditions Domain and Range None \u2192 0..1 AnonymousClassExpression Parents Children Used by ClassRule Other properties Aliases: if body antecedents Mappings: sh:condition Close Mappings: swrl:body","title":"Slot: preconditions"},{"location":"preconditions/#slot-preconditions","text":"an expression that must hold in order for the rule to be applicable to an instance URI: linkml:preconditions","title":"Slot: preconditions"},{"location":"preconditions/#domain-and-range","text":"None \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"preconditions/#parents","text":"","title":"Parents"},{"location":"preconditions/#children","text":"","title":"Children"},{"location":"preconditions/#used-by","text":"ClassRule","title":"Used by"},{"location":"preconditions/#other-properties","text":"Aliases: if body antecedents Mappings: sh:condition Close Mappings: swrl:body","title":"Other properties"},{"location":"prefix_prefix/","text":"Slot: prefix_prefix the nsname (sans ':' for a given prefix) URI: linkml:prefix_prefix Domain and Range Prefix \u2192 1..1 Ncname Parents Children Used by Prefix","title":"Slot: prefix_prefix"},{"location":"prefix_prefix/#slot-prefix_prefix","text":"the nsname (sans ':' for a given prefix) URI: linkml:prefix_prefix","title":"Slot: prefix_prefix"},{"location":"prefix_prefix/#domain-and-range","text":"Prefix \u2192 1..1 Ncname","title":"Domain and Range"},{"location":"prefix_prefix/#parents","text":"","title":"Parents"},{"location":"prefix_prefix/#children","text":"","title":"Children"},{"location":"prefix_prefix/#used-by","text":"Prefix","title":"Used by"},{"location":"prefix_reference/","text":"Slot: prefix_reference A URI associated with a given prefix URI: linkml:prefix_reference Domain and Range Prefix \u2192 1..1 Uri Parents Children Used by Prefix","title":"Slot: prefix_reference"},{"location":"prefix_reference/#slot-prefix_reference","text":"A URI associated with a given prefix URI: linkml:prefix_reference","title":"Slot: prefix_reference"},{"location":"prefix_reference/#domain-and-range","text":"Prefix \u2192 1..1 Uri","title":"Domain and Range"},{"location":"prefix_reference/#parents","text":"","title":"Parents"},{"location":"prefix_reference/#children","text":"","title":"Children"},{"location":"prefix_reference/#used-by","text":"Prefix","title":"Used by"},{"location":"prefixes/","text":"Slot: prefixes prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes URI: linkml:prefixes Domain and Range SchemaDefinition \u2192 0..* Prefix Parents Children Used by SchemaDefinition","title":"Slot: prefixes"},{"location":"prefixes/#slot-prefixes","text":"prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes URI: linkml:prefixes","title":"Slot: prefixes"},{"location":"prefixes/#domain-and-range","text":"SchemaDefinition \u2192 0..* Prefix","title":"Domain and Range"},{"location":"prefixes/#parents","text":"","title":"Parents"},{"location":"prefixes/#children","text":"","title":"Children"},{"location":"prefixes/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"presence_enum/","text":"Enum: presence_enum enumeration of conditions by which a slot value should be set URI: linkml:presence_enum Other properties Permissible Values Text Description Meaning Other Information UNCOMMITTED PRESENT ABSENT","title":"Enum: presence_enum"},{"location":"presence_enum/#enum-presence_enum","text":"enumeration of conditions by which a slot value should be set URI: linkml:presence_enum","title":"Enum: presence_enum"},{"location":"presence_enum/#other-properties","text":"","title":"Other properties"},{"location":"presence_enum/#permissible-values","text":"Text Description Meaning Other Information UNCOMMITTED PRESENT ABSENT","title":"Permissible Values"},{"location":"pv_formula/","text":"Slot: pv_formula Defines the specific formula to be used to generate the permissible values. URI: linkml:pv_formula Domain and Range EnumDefinition \u2192 0..1 pv_formula_options Parents Children Used by EnumDefinition Other properties Comments: you cannot have BOTH the permissible_values and permissible_value_formula tag code_set must be supplied for this to be valid","title":"Slot: pv_formula"},{"location":"pv_formula/#slot-pv_formula","text":"Defines the specific formula to be used to generate the permissible values. URI: linkml:pv_formula","title":"Slot: pv_formula"},{"location":"pv_formula/#domain-and-range","text":"EnumDefinition \u2192 0..1 pv_formula_options","title":"Domain and Range"},{"location":"pv_formula/#parents","text":"","title":"Parents"},{"location":"pv_formula/#children","text":"","title":"Children"},{"location":"pv_formula/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"pv_formula/#other-properties","text":"Comments: you cannot have BOTH the permissible_values and permissible_value_formula tag code_set must be supplied for this to be valid","title":"Other properties"},{"location":"pv_formula_options/","text":"Enum: pv_formula_options The formula used to generate the set of permissible values from the code_set values URI: linkml:pv_formula_options Other properties Permissible Values Text Description Meaning Other Information CODE The permissible values are the set of possible codes in the code set CURIE The permissible values are the set of CURIES in the code set URI The permissible values are the set of code URIs in the code set FHIR_CODING The permissible values are the set of FHIR coding elements derived from the code set","title":"Enum: pv_formula_options"},{"location":"pv_formula_options/#enum-pv_formula_options","text":"The formula used to generate the set of permissible values from the code_set values URI: linkml:pv_formula_options","title":"Enum: pv_formula_options"},{"location":"pv_formula_options/#other-properties","text":"","title":"Other properties"},{"location":"pv_formula_options/#permissible-values","text":"Text Description Meaning Other Information CODE The permissible values are the set of possible codes in the code set CURIE The permissible values are the set of CURIES in the code set URI The permissible values are the set of code URIs in the code set FHIR_CODING The permissible values are the set of FHIR coding elements derived from the code set","title":"Permissible Values"},{"location":"range/","text":"Slot: range defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 URI: linkml:range Domain and Range SlotDefinition \u2192 0..1 Element Parents Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Comments: range is underspecified, as not all elements can appear as the range of a slot.","title":"Slot: range"},{"location":"range/#slot-range","text":"defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 URI: linkml:range","title":"Slot: range"},{"location":"range/#domain-and-range","text":"SlotDefinition \u2192 0..1 Element","title":"Domain and Range"},{"location":"range/#parents","text":"","title":"Parents"},{"location":"range/#children","text":"","title":"Children"},{"location":"range/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"range/#other-properties","text":"Comments: range is underspecified, as not all elements can appear as the range of a slot.","title":"Other properties"},{"location":"range_expression/","text":"Slot: range_expression A range that is described as a boolean expression combining existing ranges URI: linkml:range_expression Domain and Range SlotExpression \u2192 0..1 AnonymousClassExpression Parents Children Used by AnonymousSlotExpression PathExpression SlotDefinition SlotExpression Other properties Comments: one use for this is being able to describe a range using any_of expressions, for example to combine two enums","title":"Slot: range_expression"},{"location":"range_expression/#slot-range_expression","text":"A range that is described as a boolean expression combining existing ranges URI: linkml:range_expression","title":"Slot: range_expression"},{"location":"range_expression/#domain-and-range","text":"SlotExpression \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"range_expression/#parents","text":"","title":"Parents"},{"location":"range_expression/#children","text":"","title":"Children"},{"location":"range_expression/#used-by","text":"AnonymousSlotExpression PathExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"range_expression/#other-properties","text":"Comments: one use for this is being able to describe a range using any_of expressions, for example to combine two enums","title":"Other properties"},{"location":"readonly/","text":"Slot: readonly If present, slot is read only. Text explains why URI: linkml:readonly Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition","title":"Slot: readonly"},{"location":"readonly/#slot-readonly","text":"If present, slot is read only. Text explains why URI: linkml:readonly","title":"Slot: readonly"},{"location":"readonly/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"readonly/#parents","text":"","title":"Parents"},{"location":"readonly/#children","text":"","title":"Children"},{"location":"readonly/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"recommended/","text":"Slot: recommended true means that the slot should be present in the loaded definition, but this is not required URI: linkml:recommended Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Comments: This is to be used where not all data is expected to conform to having a required field If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data See also: https://github.com/linkml/linkml/issues/177","title":"Slot: recommended"},{"location":"recommended/#slot-recommended","text":"true means that the slot should be present in the loaded definition, but this is not required URI: linkml:recommended","title":"Slot: recommended"},{"location":"recommended/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"recommended/#parents","text":"","title":"Parents"},{"location":"recommended/#children","text":"","title":"Children"},{"location":"recommended/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"recommended/#other-properties","text":"Comments: This is to be used where not all data is expected to conform to having a required field If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data See also: https://github.com/linkml/linkml/issues/177","title":"Other properties"},{"location":"reflexive/","text":"Slot: reflexive If s is reflexive, then i.s=i for all instances i URI: linkml:reflexive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Comments: it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive","title":"Slot: reflexive"},{"location":"reflexive/#slot-reflexive","text":"If s is reflexive, then i.s=i for all instances i URI: linkml:reflexive","title":"Slot: reflexive"},{"location":"reflexive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"reflexive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"reflexive/#children","text":"","title":"Children"},{"location":"reflexive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"reflexive/#other-properties","text":"Comments: it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive","title":"Other properties"},{"location":"reflexive_transitive_form_of/","text":"Slot: reflexive_transitive_form_of transitive_form_of including the reflexive case URI: linkml:reflexive_transitive_form_of Domain and Range None \u2192 0..1 SlotDefinition Parents is_a: transitive_form_of Children Used by SlotDefinition","title":"Slot: reflexive_transitive_form_of"},{"location":"reflexive_transitive_form_of/#slot-reflexive_transitive_form_of","text":"transitive_form_of including the reflexive case URI: linkml:reflexive_transitive_form_of","title":"Slot: reflexive_transitive_form_of"},{"location":"reflexive_transitive_form_of/#domain-and-range","text":"None \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"reflexive_transitive_form_of/#parents","text":"is_a: transitive_form_of","title":"Parents"},{"location":"reflexive_transitive_form_of/#children","text":"","title":"Children"},{"location":"reflexive_transitive_form_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"related_mappings/","text":"Slot: related mappings A list of terms from different schemas or terminology systems that have related meaning. URI: linkml:related_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:relatedMatch","title":"Slot: related mappings"},{"location":"related_mappings/#slot-related-mappings","text":"A list of terms from different schemas or terminology systems that have related meaning. URI: linkml:related_mappings","title":"Slot: related mappings"},{"location":"related_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"related_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"related_mappings/#children","text":"","title":"Children"},{"location":"related_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"related_mappings/#other-properties","text":"Mappings: skos:relatedMatch","title":"Other properties"},{"location":"relational_logical_characteristic/","text":"Slot: relational_logical_characteristic A property of a slot that pertains to its logical properties URI: linkml:relational_logical_characteristic Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children asymmetric irreflexive locally_reflexive reflexive symmetric transitive Used by","title":"Slot: relational_logical_characteristic"},{"location":"relational_logical_characteristic/#slot-relational_logical_characteristic","text":"A property of a slot that pertains to its logical properties URI: linkml:relational_logical_characteristic","title":"Slot: relational_logical_characteristic"},{"location":"relational_logical_characteristic/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"relational_logical_characteristic/#parents","text":"","title":"Parents"},{"location":"relational_logical_characteristic/#children","text":"asymmetric irreflexive locally_reflexive reflexive symmetric transitive","title":"Children"},{"location":"relational_logical_characteristic/#used-by","text":"","title":"Used by"},{"location":"relational_role/","text":"Slot: relational_role the role a slot on a relationship class plays, for example, the subject, object or predicate roles URI: linkml:relational_role Domain and Range SlotDefinition \u2192 0..1 relational_role_enum Parents Children Used by SlotDefinition Other properties Aliases: reification_role Comments: this should only be used on slots that are applicable to class that represent relationships in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes","title":"Slot: relational_role"},{"location":"relational_role/#slot-relational_role","text":"the role a slot on a relationship class plays, for example, the subject, object or predicate roles URI: linkml:relational_role","title":"Slot: relational_role"},{"location":"relational_role/#domain-and-range","text":"SlotDefinition \u2192 0..1 relational_role_enum","title":"Domain and Range"},{"location":"relational_role/#parents","text":"","title":"Parents"},{"location":"relational_role/#children","text":"","title":"Children"},{"location":"relational_role/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"relational_role/#other-properties","text":"Aliases: reification_role Comments: this should only be used on slots that are applicable to class that represent relationships in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes","title":"Other properties"},{"location":"relational_role_enum/","text":"Enum: relational_role_enum enumeration of roles a slot on a relationship class can play URI: linkml:relational_role_enum Other properties Permissible Values Text Description Meaning Other Information SUBJECT a slot with this role connects a relationship to its subject/source node rdf:subject OBJECT a slot with this role connects a relationship to its object/target node rdf:object PREDICATE a slot with this role connects a relationship to its predicate/property rdf:predicate NODE a slot with this role connects a symmetric relationship to a node that represents either subject or object node OTHER_ROLE a slot with this role connects a relationship to a node that is not subject/object/predicate","title":"Enum: relational_role_enum"},{"location":"relational_role_enum/#enum-relational_role_enum","text":"enumeration of roles a slot on a relationship class can play URI: linkml:relational_role_enum","title":"Enum: relational_role_enum"},{"location":"relational_role_enum/#other-properties","text":"","title":"Other properties"},{"location":"relational_role_enum/#permissible-values","text":"Text Description Meaning Other Information SUBJECT a slot with this role connects a relationship to its subject/source node rdf:subject OBJECT a slot with this role connects a relationship to its object/target node rdf:object PREDICATE a slot with this role connects a relationship to its predicate/property rdf:predicate NODE a slot with this role connects a symmetric relationship to a node that represents either subject or object node OTHER_ROLE a slot with this role connects a relationship to a node that is not subject/object/predicate","title":"Permissible Values"},{"location":"repr/","text":"Slot: repr the name of the python object that implements this type definition URI: linkml:repr Domain and Range TypeDefinition \u2192 0..1 String Parents Children Used by TypeDefinition","title":"Slot: repr"},{"location":"repr/#slot-repr","text":"the name of the python object that implements this type definition URI: linkml:repr","title":"Slot: repr"},{"location":"repr/#domain-and-range","text":"TypeDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"repr/#parents","text":"","title":"Parents"},{"location":"repr/#children","text":"","title":"Children"},{"location":"repr/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"represents_relationship/","text":"Slot: represents_relationship true if this class represents a relationship rather than an entity URI: linkml:represents_relationship Domain and Range ClassDefinition \u2192 0..1 Boolean Parents Children Used by ClassDefinition Other properties Aliases: is_reified Comments: in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond in the context of RDF, this should be used when instances of the class are rdf:Statement s in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes See also: rdf:Statement https://patterns.dataincubator.org/book/qualified-relation.html","title":"Slot: represents_relationship"},{"location":"represents_relationship/#slot-represents_relationship","text":"true if this class represents a relationship rather than an entity URI: linkml:represents_relationship","title":"Slot: represents_relationship"},{"location":"represents_relationship/#domain-and-range","text":"ClassDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"represents_relationship/#parents","text":"","title":"Parents"},{"location":"represents_relationship/#children","text":"","title":"Children"},{"location":"represents_relationship/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"represents_relationship/#other-properties","text":"Aliases: is_reified Comments: in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond in the context of RDF, this should be used when instances of the class are rdf:Statement s in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes See also: rdf:Statement https://patterns.dataincubator.org/book/qualified-relation.html","title":"Other properties"},{"location":"required/","text":"Slot: required true means that the slot must be present in the loaded definition URI: linkml:required Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: required"},{"location":"required/#slot-required","text":"true means that the slot must be present in the loaded definition URI: linkml:required","title":"Slot: required"},{"location":"required/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"required/#parents","text":"","title":"Parents"},{"location":"required/#children","text":"","title":"Children"},{"location":"required/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"reversed/","text":"Slot: reversed true if the slot is to be inversed URI: linkml:reversed Domain and Range None \u2192 0..1 Boolean Parents Children Used by PathExpression","title":"Slot: reversed"},{"location":"reversed/#slot-reversed","text":"true if the slot is to be inversed URI: linkml:reversed","title":"Slot: reversed"},{"location":"reversed/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"reversed/#parents","text":"","title":"Parents"},{"location":"reversed/#children","text":"","title":"Children"},{"location":"reversed/#used-by","text":"PathExpression","title":"Used by"},{"location":"role/","text":"Slot: role the role played by the slot range URI: linkml:role Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition","title":"Slot: role"},{"location":"role/#slot-role","text":"the role played by the slot range URI: linkml:role","title":"Slot: role"},{"location":"role/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"role/#parents","text":"","title":"Parents"},{"location":"role/#children","text":"","title":"Children"},{"location":"role/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"rules/","text":"Slot: rules the collection of rules that apply to all members of this class URI: linkml:rules Domain and Range ClassDefinition \u2192 0..* ClassRule Parents Children class_definition\u279erules Used by Other properties Mappings: sh:rule","title":"Slot: rules"},{"location":"rules/#slot-rules","text":"the collection of rules that apply to all members of this class URI: linkml:rules","title":"Slot: rules"},{"location":"rules/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassRule","title":"Domain and Range"},{"location":"rules/#parents","text":"","title":"Parents"},{"location":"rules/#children","text":"class_definition\u279erules","title":"Children"},{"location":"rules/#used-by","text":"","title":"Used by"},{"location":"rules/#other-properties","text":"Mappings: sh:rule","title":"Other properties"},{"location":"schema_definition_name/","text":"Slot: name the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:schema_definition_name Domain and Range SchemaDefinition \u2192 1..1 Ncname Parents is_a: name Children Used by SchemaDefinition Other properties Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Slot: name"},{"location":"schema_definition_name/#slot-name","text":"the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:schema_definition_name","title":"Slot: name"},{"location":"schema_definition_name/#domain-and-range","text":"SchemaDefinition \u2192 1..1 Ncname","title":"Domain and Range"},{"location":"schema_definition_name/#parents","text":"is_a: name","title":"Parents"},{"location":"schema_definition_name/#children","text":"","title":"Children"},{"location":"schema_definition_name/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"schema_definition_name/#other-properties","text":"Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Other properties"},{"location":"see_also/","text":"Slot: see_also a reference URI: linkml:see_also Domain and Range Element \u2192 0..* Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: rdfs:seeAlso In Subsets: owl","title":"Slot: see_also"},{"location":"see_also/#slot-see_also","text":"a reference URI: linkml:see_also","title":"Slot: see_also"},{"location":"see_also/#domain-and-range","text":"Element \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"see_also/#parents","text":"","title":"Parents"},{"location":"see_also/#children","text":"","title":"Children"},{"location":"see_also/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"see_also/#other-properties","text":"Mappings: rdfs:seeAlso In Subsets: owl","title":"Other properties"},{"location":"singular_name/","text":"Slot: singular_name a name that is used in the singular form URI: linkml:singular_name Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition Other properties Mappings: skos:altLabel","title":"Slot: singular_name"},{"location":"singular_name/#slot-singular_name","text":"a name that is used in the singular form URI: linkml:singular_name","title":"Slot: singular_name"},{"location":"singular_name/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"singular_name/#parents","text":"","title":"Parents"},{"location":"singular_name/#children","text":"","title":"Children"},{"location":"singular_name/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"singular_name/#other-properties","text":"Mappings: skos:altLabel","title":"Other properties"},{"location":"slot_conditions/","text":"Slot: slot_conditions the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_conditions Domain and Range None \u2192 0..* SlotDefinition Parents Children Used by AnonymousClassExpression ClassDefinition ClassExpression","title":"Slot: slot_conditions"},{"location":"slot_conditions/#slot-slot_conditions","text":"the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_conditions","title":"Slot: slot_conditions"},{"location":"slot_conditions/#domain-and-range","text":"None \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_conditions/#parents","text":"","title":"Parents"},{"location":"slot_conditions/#children","text":"","title":"Children"},{"location":"slot_conditions/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"slot_definition_apply_to/","text":"Slot: apply_to Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:slot_definition_apply_to Domain and Range SlotDefinition \u2192 0..* SlotDefinition Parents is_a: apply_to Children Used by SlotDefinition","title":"Slot: apply_to"},{"location":"slot_definition_apply_to/#slot-apply_to","text":"Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:slot_definition_apply_to","title":"Slot: apply_to"},{"location":"slot_definition_apply_to/#domain-and-range","text":"SlotDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_apply_to/#parents","text":"is_a: apply_to","title":"Parents"},{"location":"slot_definition_apply_to/#children","text":"","title":"Children"},{"location":"slot_definition_apply_to/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:slot_definition_is_a Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents is_a: is_a Children Used by SlotDefinition","title":"Slot: is_a"},{"location":"slot_definition_is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:slot_definition_is_a","title":"Slot: is_a"},{"location":"slot_definition_is_a/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_is_a/#parents","text":"is_a: is_a","title":"Parents"},{"location":"slot_definition_is_a/#children","text":"","title":"Children"},{"location":"slot_definition_is_a/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:slot_definition_mixins Domain and Range SlotDefinition \u2192 0..* SlotDefinition Parents is_a: mixins Children Used by SlotDefinition Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"slot_definition_mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:slot_definition_mixins","title":"Slot: mixins"},{"location":"slot_definition_mixins/#domain-and-range","text":"SlotDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_mixins/#parents","text":"is_a: mixins","title":"Parents"},{"location":"slot_definition_mixins/#children","text":"","title":"Children"},{"location":"slot_definition_mixins/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"slot_definitions/","text":"Slot: slots slot definitions URI: linkml:slot_definitions Domain and Range SchemaDefinition \u2192 0..* SlotDefinition Parents Children Used by SchemaDefinition","title":"Slot: slots"},{"location":"slot_definitions/#slot-slots","text":"slot definitions URI: linkml:slot_definitions","title":"Slot: slots"},{"location":"slot_definitions/#domain-and-range","text":"SchemaDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definitions/#parents","text":"","title":"Parents"},{"location":"slot_definitions/#children","text":"","title":"Children"},{"location":"slot_definitions/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"slot_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:slot_expression_all_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: all_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"slot_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:slot_expression_all_of","title":"Slot: all_of"},{"location":"slot_expression_all_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"slot_expression_all_of/#children","text":"","title":"Children"},{"location":"slot_expression_all_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"slot_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:slot_expression_any_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: any_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"slot_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:slot_expression_any_of","title":"Slot: any_of"},{"location":"slot_expression_any_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"slot_expression_any_of/#children","text":"","title":"Children"},{"location":"slot_expression_any_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"slot_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:slot_expression_exactly_one_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: exactly_one_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"slot_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:slot_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"slot_expression_exactly_one_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"slot_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"slot_expression_exactly_one_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"slot_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:slot_expression_none_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: none_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"slot_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:slot_expression_none_of","title":"Slot: none_of"},{"location":"slot_expression_none_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"slot_expression_none_of/#children","text":"","title":"Children"},{"location":"slot_expression_none_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"slot_group/","text":"Slot: slot_group allows for grouping of related slots into a grouping slot that serves the role of a group URI: linkml:slot_group Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents Children Used by SlotDefinition Other properties Mappings: sh:group","title":"Slot: slot_group"},{"location":"slot_group/#slot-slot_group","text":"allows for grouping of related slots into a grouping slot that serves the role of a group URI: linkml:slot_group","title":"Slot: slot_group"},{"location":"slot_group/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"slot_group/#parents","text":"","title":"Parents"},{"location":"slot_group/#children","text":"","title":"Children"},{"location":"slot_group/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_group/#other-properties","text":"Mappings: sh:group","title":"Other properties"},{"location":"slot_names_unique/","text":"Slot: slot_names_unique if true then induced/mangled slot names are not created for class_usage and attributes URI: linkml:slot_names_unique Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition SchemaDefinition","title":"Slot: slot_names_unique"},{"location":"slot_names_unique/#slot-slot_names_unique","text":"if true then induced/mangled slot names are not created for class_usage and attributes URI: linkml:slot_names_unique","title":"Slot: slot_names_unique"},{"location":"slot_names_unique/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"slot_names_unique/#parents","text":"","title":"Parents"},{"location":"slot_names_unique/#children","text":"","title":"Children"},{"location":"slot_names_unique/#used-by","text":"ClassDefinition SchemaDefinition","title":"Used by"},{"location":"slot_uri/","text":"Slot: slot_uri predicate of this slot for semantic web application URI: linkml:slot_uri Domain and Range SlotDefinition \u2192 0..1 Uriorcurie Parents Children Used by SlotDefinition","title":"Slot: slot_uri"},{"location":"slot_uri/#slot-slot_uri","text":"predicate of this slot for semantic web application URI: linkml:slot_uri","title":"Slot: slot_uri"},{"location":"slot_uri/#domain-and-range","text":"SlotDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"slot_uri/#parents","text":"","title":"Parents"},{"location":"slot_uri/#children","text":"","title":"Children"},{"location":"slot_uri/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_usage/","text":"Slot: slot_usage the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_usage Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition Other properties Comments: Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints","title":"Slot: slot_usage"},{"location":"slot_usage/#slot-slot_usage","text":"the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_usage","title":"Slot: slot_usage"},{"location":"slot_usage/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_usage/#parents","text":"","title":"Parents"},{"location":"slot_usage/#children","text":"","title":"Children"},{"location":"slot_usage/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"slot_usage/#other-properties","text":"Comments: Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints","title":"Other properties"},{"location":"slots/","text":"Slot: slots list of slot names that are applicable to a class URI: linkml:slots Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition Other properties Comments: This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries. Formally,","title":"Slot: slots"},{"location":"slots/#slot-slots","text":"list of slot names that are applicable to a class URI: linkml:slots","title":"Slot: slots"},{"location":"slots/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slots/#parents","text":"","title":"Parents"},{"location":"slots/#children","text":"","title":"Children"},{"location":"slots/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"slots/#other-properties","text":"Comments: This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries. Formally,","title":"Other properties"},{"location":"source/","text":"Slot: source A related resource from which the element is derived. URI: linkml:source Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: dcterms:source Comments: The described resource may be derived from the related resource in whole or in part Close Mappings: prov:wasDerivedFrom schema:isBasedOn","title":"Slot: source"},{"location":"source/#slot-source","text":"A related resource from which the element is derived. URI: linkml:source","title":"Slot: source"},{"location":"source/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"source/#parents","text":"","title":"Parents"},{"location":"source/#children","text":"","title":"Children"},{"location":"source/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"source/#other-properties","text":"Mappings: dcterms:source Comments: The described resource may be derived from the related resource in whole or in part Close Mappings: prov:wasDerivedFrom schema:isBasedOn","title":"Other properties"},{"location":"source_file/","text":"Slot: source_file name, uri or description of the source of the schema URI: linkml:source_file Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: source_file"},{"location":"source_file/#slot-source_file","text":"name, uri or description of the source of the schema URI: linkml:source_file","title":"Slot: source_file"},{"location":"source_file/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"source_file/#parents","text":"","title":"Parents"},{"location":"source_file/#children","text":"","title":"Children"},{"location":"source_file/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"source_file/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"source_file_date/","text":"Slot: source_file_date modification date of the source of the schema URI: linkml:source_file_date Domain and Range SchemaDefinition \u2192 0..1 Datetime Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: source_file_date"},{"location":"source_file_date/#slot-source_file_date","text":"modification date of the source of the schema URI: linkml:source_file_date","title":"Slot: source_file_date"},{"location":"source_file_date/#domain-and-range","text":"SchemaDefinition \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"source_file_date/#parents","text":"","title":"Parents"},{"location":"source_file_date/#children","text":"","title":"Children"},{"location":"source_file_date/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"source_file_date/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"source_file_size/","text":"Slot: source_file_size size in bytes of the source of the schema URI: linkml:source_file_size Domain and Range SchemaDefinition \u2192 0..1 Integer Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: source_file_size"},{"location":"source_file_size/#slot-source_file_size","text":"size in bytes of the source of the schema URI: linkml:source_file_size","title":"Slot: source_file_size"},{"location":"source_file_size/#domain-and-range","text":"SchemaDefinition \u2192 0..1 Integer","title":"Domain and Range"},{"location":"source_file_size/#parents","text":"","title":"Parents"},{"location":"source_file_size/#children","text":"","title":"Children"},{"location":"source_file_size/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"source_file_size/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"status/","text":"Slot: status status of the element URI: linkml:status Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: bibo:status Examples: Example(value='bibo:draft', description=None)","title":"Slot: status"},{"location":"status/#slot-status","text":"status of the element URI: linkml:status","title":"Slot: status"},{"location":"status/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"status/#parents","text":"","title":"Parents"},{"location":"status/#children","text":"","title":"Children"},{"location":"status/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"status/#other-properties","text":"Mappings: bibo:status Examples: Example(value='bibo:draft', description=None)","title":"Other properties"},{"location":"string_serialization/","text":"Slot: string_serialization Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm URI: linkml:string_serialization Domain and Range Definition \u2192 0..1 String Parents Children Used by ClassDefinition Definition SlotDefinition Other properties See also: https://github.com/linkml/issues/128","title":"Slot: string_serialization"},{"location":"string_serialization/#slot-string_serialization","text":"Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm URI: linkml:string_serialization","title":"Slot: string_serialization"},{"location":"string_serialization/#domain-and-range","text":"Definition \u2192 0..1 String","title":"Domain and Range"},{"location":"string_serialization/#parents","text":"","title":"Parents"},{"location":"string_serialization/#children","text":"","title":"Children"},{"location":"string_serialization/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"string_serialization/#other-properties","text":"See also: https://github.com/linkml/issues/128","title":"Other properties"},{"location":"subclass_of/","text":"Slot: subclass_of rdfs:subClassOf to be emitted in OWL generation URI: linkml:subclass_of Domain and Range ClassDefinition \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Other properties Mappings: rdfs:subClassOf","title":"Slot: subclass_of"},{"location":"subclass_of/#slot-subclass_of","text":"rdfs:subClassOf to be emitted in OWL generation URI: linkml:subclass_of","title":"Slot: subclass_of"},{"location":"subclass_of/#domain-and-range","text":"ClassDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"subclass_of/#parents","text":"","title":"Parents"},{"location":"subclass_of/#children","text":"","title":"Children"},{"location":"subclass_of/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"subclass_of/#other-properties","text":"Mappings: rdfs:subClassOf","title":"Other properties"},{"location":"subproperty_of/","text":"Slot: subproperty_of Ontology property which this slot is a subproperty of URI: linkml:subproperty_of Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents Children Used by SlotDefinition Other properties Mappings: rdfs:subPropertyOf","title":"Slot: subproperty_of"},{"location":"subproperty_of/#slot-subproperty_of","text":"Ontology property which this slot is a subproperty of URI: linkml:subproperty_of","title":"Slot: subproperty_of"},{"location":"subproperty_of/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"subproperty_of/#parents","text":"","title":"Parents"},{"location":"subproperty_of/#children","text":"","title":"Children"},{"location":"subproperty_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"subproperty_of/#other-properties","text":"Mappings: rdfs:subPropertyOf","title":"Other properties"},{"location":"subsets/","text":"Slot: subsets list of subsets referenced in this model URI: linkml:subsets Domain and Range SchemaDefinition \u2192 0..* SubsetDefinition Parents Children Used by SchemaDefinition","title":"Slot: subsets"},{"location":"subsets/#slot-subsets","text":"list of subsets referenced in this model URI: linkml:subsets","title":"Slot: subsets"},{"location":"subsets/#domain-and-range","text":"SchemaDefinition \u2192 0..* SubsetDefinition","title":"Domain and Range"},{"location":"subsets/#parents","text":"","title":"Parents"},{"location":"subsets/#children","text":"","title":"Children"},{"location":"subsets/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"symmetric/","text":"Slot: symmetric If s is symmetric, and i.s=v, then v.s=i URI: linkml:symmetric Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition","title":"Slot: symmetric"},{"location":"symmetric/#slot-symmetric","text":"If s is symmetric, and i.s=v, then v.s=i URI: linkml:symmetric","title":"Slot: symmetric"},{"location":"symmetric/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"symmetric/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"symmetric/#children","text":"","title":"Children"},{"location":"symmetric/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"text/","text":"Slot: text URI: linkml:text Domain and Range PermissibleValue \u2192 1..1 String Parents Children Used by PermissibleValue","title":"Slot: text"},{"location":"text/#slot-text","text":"URI: linkml:text","title":"Slot: text"},{"location":"text/#domain-and-range","text":"PermissibleValue \u2192 1..1 String","title":"Domain and Range"},{"location":"text/#parents","text":"","title":"Parents"},{"location":"text/#children","text":"","title":"Children"},{"location":"text/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"title/","text":"Slot: title the official title of the element URI: linkml:title Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: dcterms:title In Subsets: owl","title":"Slot: title"},{"location":"title/#slot-title","text":"the official title of the element URI: linkml:title","title":"Slot: title"},{"location":"title/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"title/#parents","text":"","title":"Parents"},{"location":"title/#children","text":"","title":"Children"},{"location":"title/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"title/#other-properties","text":"Mappings: dcterms:title In Subsets: owl","title":"Other properties"},{"location":"todos/","text":"Slot: todos Outstanding issue that needs resolution URI: linkml:todos Domain and Range Element \u2192 0..* String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: todos"},{"location":"todos/#slot-todos","text":"Outstanding issue that needs resolution URI: linkml:todos","title":"Slot: todos"},{"location":"todos/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"todos/#parents","text":"","title":"Parents"},{"location":"todos/#children","text":"","title":"Children"},{"location":"todos/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"transitive/","text":"Slot: transitive If s is transitive, and i.s=z, and s.s=j, then i.s=j URI: linkml:transitive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition","title":"Slot: transitive"},{"location":"transitive/#slot-transitive","text":"If s is transitive, and i.s=z, and s.s=j, then i.s=j URI: linkml:transitive","title":"Slot: transitive"},{"location":"transitive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"transitive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"transitive/#children","text":"","title":"Children"},{"location":"transitive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"transitive_form_of/","text":"Slot: transitive_form_of If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive URI: linkml:transitive_form_of Domain and Range None \u2192 0..1 SlotDefinition Parents Children reflexive_transitive_form_of Used by SlotDefinition Other properties Comments: {'Example': 'ancestor_of is the transitive_form_of parent_of'}","title":"Slot: transitive_form_of"},{"location":"transitive_form_of/#slot-transitive_form_of","text":"If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive URI: linkml:transitive_form_of","title":"Slot: transitive_form_of"},{"location":"transitive_form_of/#domain-and-range","text":"None \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"transitive_form_of/#parents","text":"","title":"Parents"},{"location":"transitive_form_of/#children","text":"reflexive_transitive_form_of","title":"Children"},{"location":"transitive_form_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"transitive_form_of/#other-properties","text":"Comments: {'Example': 'ancestor_of is the transitive_form_of parent_of'}","title":"Other properties"},{"location":"traverse/","text":"Slot: traverse the slot to traverse URI: linkml:traverse Domain and Range None \u2192 0..1 SlotDefinition Parents Children Used by PathExpression","title":"Slot: traverse"},{"location":"traverse/#slot-traverse","text":"the slot to traverse URI: linkml:traverse","title":"Slot: traverse"},{"location":"traverse/#domain-and-range","text":"None \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"traverse/#parents","text":"","title":"Parents"},{"location":"traverse/#children","text":"","title":"Children"},{"location":"traverse/#used-by","text":"PathExpression","title":"Used by"},{"location":"tree_root/","text":"Slot: tree_root indicator that this is the root class in tree structures URI: linkml:tree_root Domain and Range ClassDefinition \u2192 0..1 Boolean Parents Children Used by ClassDefinition","title":"Slot: tree_root"},{"location":"tree_root/#slot-tree_root","text":"indicator that this is the root class in tree structures URI: linkml:tree_root","title":"Slot: tree_root"},{"location":"tree_root/#domain-and-range","text":"ClassDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"tree_root/#parents","text":"","title":"Parents"},{"location":"tree_root/#children","text":"","title":"Children"},{"location":"tree_root/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"type_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:type_expression_all_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: all_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"type_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:type_expression_all_of","title":"Slot: all_of"},{"location":"type_expression_all_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"type_expression_all_of/#children","text":"","title":"Children"},{"location":"type_expression_all_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"type_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:type_expression_any_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: any_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"type_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:type_expression_any_of","title":"Slot: any_of"},{"location":"type_expression_any_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"type_expression_any_of/#children","text":"","title":"Children"},{"location":"type_expression_any_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"type_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:type_expression_exactly_one_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: exactly_one_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"type_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:type_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"type_expression_exactly_one_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"type_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"type_expression_exactly_one_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"type_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:type_expression_none_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: none_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"type_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:type_expression_none_of","title":"Slot: none_of"},{"location":"type_expression_none_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"type_expression_none_of/#children","text":"","title":"Children"},{"location":"type_expression_none_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"type_uri/","text":"Slot: uri The uri that defines the possible values for the type definition URI: linkml:type_uri Domain and Range TypeDefinition \u2192 0..1 Uriorcurie Parents Children Used by TypeDefinition Other properties Comments: uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps) every root type must have a type uri","title":"Slot: uri"},{"location":"type_uri/#slot-uri","text":"The uri that defines the possible values for the type definition URI: linkml:type_uri","title":"Slot: uri"},{"location":"type_uri/#domain-and-range","text":"TypeDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"type_uri/#parents","text":"","title":"Parents"},{"location":"type_uri/#children","text":"","title":"Children"},{"location":"type_uri/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"type_uri/#other-properties","text":"Comments: uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps) every root type must have a type uri","title":"Other properties"},{"location":"typeof/","text":"Slot: typeof Names a parent type URI: linkml:typeof Domain and Range TypeDefinition \u2192 0..1 TypeDefinition Parents Children Used by TypeDefinition Other properties Comments: the target type definition of the typeof slot is referred to as the \"parent type\" the type definition containing the typeof slot is referred to as the \"child type\" type definitions without a typeof slot are referred to as a \"root type\"","title":"Slot: typeof"},{"location":"typeof/#slot-typeof","text":"Names a parent type URI: linkml:typeof","title":"Slot: typeof"},{"location":"typeof/#domain-and-range","text":"TypeDefinition \u2192 0..1 TypeDefinition","title":"Domain and Range"},{"location":"typeof/#parents","text":"","title":"Parents"},{"location":"typeof/#children","text":"","title":"Children"},{"location":"typeof/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"typeof/#other-properties","text":"Comments: the target type definition of the typeof slot is referred to as the \"parent type\" the type definition containing the typeof slot is referred to as the \"child type\" type definitions without a typeof slot are referred to as a \"root type\"","title":"Other properties"},{"location":"types/","text":"Slot: types data types used in the model URI: linkml:types Domain and Range SchemaDefinition \u2192 0..* TypeDefinition Parents Children Used by SchemaDefinition","title":"Slot: types"},{"location":"types/#slot-types","text":"data types used in the model URI: linkml:types","title":"Slot: types"},{"location":"types/#domain-and-range","text":"SchemaDefinition \u2192 0..* TypeDefinition","title":"Domain and Range"},{"location":"types/#parents","text":"","title":"Parents"},{"location":"types/#children","text":"","title":"Children"},{"location":"types/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"union_of/","text":"Slot: union_of indicates that the domain class consists exactly of the members of the classes in the range URI: linkml:union_of Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents Children Used by ClassDefinition","title":"Slot: union_of"},{"location":"union_of/#slot-union_of","text":"indicates that the domain class consists exactly of the members of the classes in the range URI: linkml:union_of","title":"Slot: union_of"},{"location":"union_of/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"union_of/#parents","text":"","title":"Parents"},{"location":"union_of/#children","text":"","title":"Children"},{"location":"union_of/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"unique_key_slots/","text":"Slot: unique_key_slots list of slot names that form a key URI: linkml:unique_key_slots Domain and Range UniqueKey \u2192 1..* SlotDefinition Parents Children Used by UniqueKey","title":"Slot: unique_key_slots"},{"location":"unique_key_slots/#slot-unique_key_slots","text":"list of slot names that form a key URI: linkml:unique_key_slots","title":"Slot: unique_key_slots"},{"location":"unique_key_slots/#domain-and-range","text":"UniqueKey \u2192 1..* SlotDefinition","title":"Domain and Range"},{"location":"unique_key_slots/#parents","text":"","title":"Parents"},{"location":"unique_key_slots/#children","text":"","title":"Children"},{"location":"unique_key_slots/#used-by","text":"UniqueKey","title":"Used by"},{"location":"unique_keys/","text":"Slot: unique_keys Set of unique keys for this slot URI: linkml:unique_keys Domain and Range ClassDefinition \u2192 0..* UniqueKey Parents Children Used by ClassDefinition Other properties Exact Mappings: owl:hasKey","title":"Slot: unique_keys"},{"location":"unique_keys/#slot-unique_keys","text":"Set of unique keys for this slot URI: linkml:unique_keys","title":"Slot: unique_keys"},{"location":"unique_keys/#domain-and-range","text":"ClassDefinition \u2192 0..* UniqueKey","title":"Domain and Range"},{"location":"unique_keys/#parents","text":"","title":"Parents"},{"location":"unique_keys/#children","text":"","title":"Children"},{"location":"unique_keys/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"unique_keys/#other-properties","text":"Exact Mappings: owl:hasKey","title":"Other properties"},{"location":"usage_slot_name/","text":"Slot: usage_slot_name The name of the slot referenced in the slot_usage URI: linkml:usage_slot_name Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition","title":"Slot: usage_slot_name"},{"location":"usage_slot_name/#slot-usage_slot_name","text":"The name of the slot referenced in the slot_usage URI: linkml:usage_slot_name","title":"Slot: usage_slot_name"},{"location":"usage_slot_name/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"usage_slot_name/#parents","text":"","title":"Parents"},{"location":"usage_slot_name/#children","text":"","title":"Children"},{"location":"usage_slot_name/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"value/","text":"Slot: value example value URI: linkml:value Domain and Range Example \u2192 0..1 String Parents Children Used by Example Other properties Mappings: skos:example","title":"Slot: value"},{"location":"value/#slot-value","text":"example value URI: linkml:value","title":"Slot: value"},{"location":"value/#domain-and-range","text":"Example \u2192 0..1 String","title":"Domain and Range"},{"location":"value/#parents","text":"","title":"Parents"},{"location":"value/#children","text":"","title":"Children"},{"location":"value/#used-by","text":"Example","title":"Used by"},{"location":"value/#other-properties","text":"Mappings: skos:example","title":"Other properties"},{"location":"value_description/","text":"Slot: description description of what the value is doing URI: linkml:value_description Domain and Range Example \u2192 0..1 String Parents Children Used by Example","title":"Slot: description"},{"location":"value_description/#slot-description","text":"description of what the value is doing URI: linkml:value_description","title":"Slot: description"},{"location":"value_description/#domain-and-range","text":"Example \u2192 0..1 String","title":"Domain and Range"},{"location":"value_description/#parents","text":"","title":"Parents"},{"location":"value_description/#children","text":"","title":"Children"},{"location":"value_description/#used-by","text":"Example","title":"Used by"},{"location":"value_presence/","text":"Slot: value_presence if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) URI: linkml:value_presence Domain and Range SlotDefinition \u2192 0..1 presence_enum Parents is_a: value_specification_constant Children Used by Other properties Comments: if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present","title":"Slot: value_presence"},{"location":"value_presence/#slot-value_presence","text":"if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) URI: linkml:value_presence","title":"Slot: value_presence"},{"location":"value_presence/#domain-and-range","text":"SlotDefinition \u2192 0..1 presence_enum","title":"Domain and Range"},{"location":"value_presence/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"value_presence/#children","text":"","title":"Children"},{"location":"value_presence/#used-by","text":"","title":"Used by"},{"location":"value_presence/#other-properties","text":"Comments: if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present","title":"Other properties"},{"location":"value_specification_constant/","text":"Slot: value_specification_constant Grouping for metamodel slots that constrain the a slot value to equal a specified constant URI: linkml:value_specification_constant Domain and Range None \u2192 0..1 String Parents Children equals_expression equals_number equals_string maximum_cardinality minimum_cardinality value_presence Used by","title":"Slot: value_specification_constant"},{"location":"value_specification_constant/#slot-value_specification_constant","text":"Grouping for metamodel slots that constrain the a slot value to equal a specified constant URI: linkml:value_specification_constant","title":"Slot: value_specification_constant"},{"location":"value_specification_constant/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"value_specification_constant/#parents","text":"","title":"Parents"},{"location":"value_specification_constant/#children","text":"equals_expression equals_number equals_string maximum_cardinality minimum_cardinality value_presence","title":"Children"},{"location":"value_specification_constant/#used-by","text":"","title":"Used by"},{"location":"values_from/","text":"Slot: values_from the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot URI: linkml:values_from Domain and Range Definition \u2192 0..* Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition","title":"Slot: values_from"},{"location":"values_from/#slot-values_from","text":"the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot URI: linkml:values_from","title":"Slot: values_from"},{"location":"values_from/#domain-and-range","text":"Definition \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"values_from/#parents","text":"","title":"Parents"},{"location":"values_from/#children","text":"","title":"Children"},{"location":"values_from/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"version/","text":"Slot: version particular version of schema URI: linkml:version Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties Mappings: pav:version In Subsets: owl Exact Mappings: schema:schemaVersion","title":"Slot: version"},{"location":"version/#slot-version","text":"particular version of schema URI: linkml:version","title":"Slot: version"},{"location":"version/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"version/#parents","text":"","title":"Parents"},{"location":"version/#children","text":"","title":"Children"},{"location":"version/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"version/#other-properties","text":"Mappings: pav:version In Subsets: owl Exact Mappings: schema:schemaVersion","title":"Other properties"}]}
\ No newline at end of file
+{"config":{"indexing":"full","lang":["en"],"min_search_length":3,"prebuild_index":false,"separator":"[\\s\\-]+"},"docs":[{"location":"","text":"meta schema A metamodel for defining linked open data schemas Classes AltDescription - an attributed description AnonymousExpression AnonymousClassExpression AnonymousSlotExpression AnonymousTypeExpression ClassLevelRule - A rule that is applied to classes ClassRule - A rule that applies to instances of a class Element - a named element in the model Definition - base class for definitions ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition. Example - usage example and description Extension - a tag/value pair used to add non-model information to an entry Annotation - a tag/value pair with the semantics of OWL Annotation LocalName - an attributed label PathExpression - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue - a permissible value, accompanied by intended text and an optional mapping to a concept URI Prefix - prefix URI tuple UniqueKey - a collection of slots whose values uniquely identify an instance of a class Mixins Annotatable - mixin for classes that support annotations ClassExpression - A boolean expression that can be used to dynamically determine membership of a class CommonMetadata - Generic metadata shared across definitions Expression - general mixin for any class that can represent some form of expression SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Extensible - mixin for classes that support extension SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Slots abstract - an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. alias - the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. aliases alt_description\u279esource - the source of an attributed description alt_description\u279edescription - text of an attributed description alt_descriptions apply_to - Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. class_definition\u279eapply_to slot_definition\u279eapply_to attributes - Inline definition of slots base - python base type that implements this type definition bidirectional - in addition to preconditions entailing postconditions, the postconditions entail the preconditions boolean_slot - A grouping of slots that expression a boolean operator over a list of operands all_of - holds if all of the expressions hold class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of any_of - holds if at least one of the expressions hold class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of exactly_one_of - holds if only one of the expressions hold class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of none_of - holds if none of the expressions hold class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of children_are_mutually_disjoint - If true then all direct is_a children are mutually disjoint and share no instances in common class_uri - URI of the class in an RDF environment classes - class definitions classification_rules - the collection of classification rules that apply to all members of this class code_set - the identifier of an enumeration code set. code_set_tag - the version tag of the enumeration code set code_set_version - the version identifier of the enumeration code set comments - notes and comments about an element intended for external consumption conforms_to - An established standard to which the element conforms. created_by - agent that created the element created_on - time at which the element was created deactivated - a deactivated rule is not executed by the rules engine default_curi_maps - ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables default_prefix - default and base prefix -- used for ':' identifiers, @base and @vocab default_range - default slot range to be used if range element is omitted from a slot definition defining_slots - The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom definition_uri - the \"native\" URI of the element deprecated - Description of why and when this element will no longer be used deprecated element has exact replacement - When an element is deprecated, it can be automatically replaced by this uri or curie deprecated element has possible replacement - When an element is deprecated, it can be potentially replaced by this uri or curie description - a description of the element's purpose and use designates_type - True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition disjoint_with - Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances class_definition\u279edisjoint_with slot_definition\u279edisjoint_with domain - defines the type of the subject of the slot. Given the following slot definition domain_of - the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context elseconditions - an expression that must hold for an instance of the class, if the preconditions no not hold emit_prefixes - a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. enums - enumerated ranges examples - example usages of an element extension\u279etag - a tag associated with an extension extension\u279evalue - the actual annotation extensions - a tag/text tuple attached to an arbitrary element annotations - a collection of tag/text tuples with the semantics of OWL Annotation followed_by - in a sequential list, this indicates the next member path_expression\u279efollowed_by from_schema - id of the schema that defined the element generation_date - date and time that the schema was loaded/generated id - The official schema URI id_prefixes - the identifier of this class or slot must begin with the URIs referenced by this prefix identifier - True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container ifabsent - function that provides a default value for the slot. Possible values for this slot are defined in imported_from - the imports entry that this element was derived from. Empty means primary source imports - other schemas that are included in this schema in_subset - used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) inherited - true means that the value of a slot is inherited by subclasses inlined - True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. inlined_as_list - True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. inverse - indicates that any instance of d s r implies that there is also an instance of r s' d is_a - specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a is_class_field - indicates that any instance, i, the domain of this slot will include an assert of i s range is_grouping_slot - true if this slot is a grouping slot is_usage_slot - True means that this slot was defined in a slot_usage situation key - True means that the key slot(s) uniquely identify the container. last_updated_on - time at which the element was last updated license - license for the schema list_value_specification_constant - Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant all_members - the value of the multiavlued slot is a list where all elements conform to the specified values. equals_number_in - the slot must have range number and the value of the slot must equal one of the specified values equals_string_in - the slot must have range string and the value of the slot must equal one of the specified values has_member - the values of the slot is multivalued with at least one member satisfying the condition local_name_source - the ncname of the source of the name local_name_value - a name assigned to an element in a given ontology local_names mappings - A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. broad mappings - A list of terms from different schemas or terminology systems that have broader meaning. close mappings - A list of terms from different schemas or terminology systems that have close meaning. exact mappings - A list of terms from different schemas or terminology systems that have identical meaning. narrow mappings - A list of terms from different schemas or terminology systems that have narrower meaning. related mappings - A list of terms from different schemas or terminology systems that have related meaning. maximum_value - for slots with ranges of type number, the value must be equal to or lowe than this meaning - the value meaning (in the 11179 sense) of a permissible value metamodel_version - Version of the metamodel used to load the schema minimum_value - for slots with ranges of type number, the value must be equal to or higher than this mixin - this slot or class can only be used as a mixin. mixins - List of definitions to be mixed in. Targets may be any definition of the same type class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins modified_by - agent that modified the element multivalued - true means that slot can have more than one value name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. schema_definition\u279ename notes - editorial notes about an element intended for internal consumption open_world - if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these owned_by - agent that owns or is the steward of the element owner - the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot path_rule - a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts pattern - the string value of the slot must conform to this regular expression permissible_values - A list of possible values for a slot range postconditions - an expression that must hold for an instance of the class, if the preconditions hold precedence - the relative order in which the element occurs preconditions - an expression that must hold in order for the rule to be applicable to an instance prefix_prefix - the nsname (sans ':' for a given prefix) prefix_reference - A URI associated with a given prefix prefixes - prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes pv_formula - Defines the specific formula to be used to generate the permissible values. range - defines the type of the object of the slot. Given the following slot definition range_expression - A range that is described as a boolean expression combining existing ranges readonly - If present, slot is read only. Text explains why recommended - true means that the slot should be present in the loaded definition, but this is not required relational_logical_characteristic - A property of a slot that pertains to its logical properties asymmetric - If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i irreflexive - If s is irreflexive, then there exists no i such i.s=i locally_reflexive - If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i reflexive - If s is reflexive, then i.s=i for all instances i symmetric - If s is symmetric, and i.s=v, then v.s=i transitive - If s is transitive, and i.s=z, and s.s=j, then i.s=j relational_role - the role a slot on a relationship class plays, for example, the subject, object or predicate roles repr - the name of the python object that implements this type definition represents_relationship - true if this class represents a relationship rather than an entity required - true means that the slot must be present in the loaded definition reversed - true if the slot is to be inversed role - the role played by the slot range rules - the collection of rules that apply to all members of this class class_definition\u279erules see_also - a reference singular_name - a name that is used in the singular form slot_conditions - the redefinition of a slot in the context of the containing class definition. schema_definition\u279eslots - slot definitions slot_group - allows for grouping of related slots into a grouping slot that serves the role of a group slot_names_unique - if true then induced/mangled slot names are not created for class_usage and attributes slot_uri - predicate of this slot for semantic web application slot_usage - the redefinition of a slot in the context of the containing class definition. slots - list of slot names that are applicable to a class source - A related resource from which the element is derived. source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema status - status of the element string_serialization - Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. subclass_of - rdfs:subClassOf to be emitted in OWL generation subproperty_of - Ontology property which this slot is a subproperty of subsets - list of subsets referenced in this model text title - the official title of the element todos - Outstanding issue that needs resolution transitive_form_of - If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive reflexive_transitive_form_of - transitive_form_of including the reflexive case traverse - the slot to traverse tree_root - indicator that this is the root class in tree structures type_definition\u279euri - The uri that defines the possible values for the type definition typeof - Names a parent type types - data types used in the model union_of - indicates that the domain class consists exactly of the members of the classes in the range unique_key_name - name of the unique key unique_key_slots - list of slot names that form a key unique_keys - Set of unique keys for this slot usage_slot_name - The name of the slot referenced in the slot_usage value - example value example\u279edescription - description of what the value is doing value_specification_constant - Grouping for metamodel slots that constrain the a slot value to equal a specified constant equals_expression - the value of the slot must equal the value of the evaluated expression equals_number - the slot must have range of a number and the value of the slot must equal the specified value equals_string - the slot must have range string and the value of the slot must equal the specified value maximum_cardinality - the maximum number of entries for a multivalued slot minimum_cardinality - the minimum number of entries for a multivalued slot value_presence - if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) values_from - the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot version - particular version of schema Enums presence_enum - enumeration of conditions by which a slot value should be set pv_formula_options - The formula used to generate the set of permissible values from the code_set values relational_role_enum - enumeration of roles a slot on a relationship class can play Subsets Owl - Set of slots that appear in the OWL representation of a model Types Built in Bool Decimal ElementIdentifier NCName NodeIdentifier URI URIorCURIE XSDDate XSDDateTime XSDTime float int str Defined Boolean ( Bool ) - A binary (true or false) value Date ( XSDDate ) - a date (year, month and day) in an idealized calendar Datetime ( XSDDateTime ) - The combination of a date and time Decimal ( Decimal ) - A real number with arbitrary precision that conforms to the xsd:decimal specification Double ( float ) - A real number that conforms to the xsd:double specification Float ( float ) - A real number that conforms to the xsd:float specification Integer ( int ) - An integer Ncname ( NCName ) - Prefix part of CURIE Nodeidentifier ( NodeIdentifier ) - A URI, CURIE or BNODE that represents a node in a model. Objectidentifier ( ElementIdentifier ) - A URI or CURIE that represents an object in the model. String ( str ) - A character string Time ( XSDTime ) - A time object represents a (local) time of day, independent of any particular day Uri ( URI ) - a complete URI Uriorcurie ( URIorCURIE ) - a URI or a CURIE","title":"Index"},{"location":"#meta-schema","text":"A metamodel for defining linked open data schemas","title":"meta schema"},{"location":"#classes","text":"AltDescription - an attributed description AnonymousExpression AnonymousClassExpression AnonymousSlotExpression AnonymousTypeExpression ClassLevelRule - A rule that is applied to classes ClassRule - A rule that applies to instances of a class Element - a named element in the model Definition - base class for definitions ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition. Example - usage example and description Extension - a tag/value pair used to add non-model information to an entry Annotation - a tag/value pair with the semantics of OWL Annotation LocalName - an attributed label PathExpression - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue - a permissible value, accompanied by intended text and an optional mapping to a concept URI Prefix - prefix URI tuple UniqueKey - a collection of slots whose values uniquely identify an instance of a class","title":"Classes"},{"location":"#mixins","text":"Annotatable - mixin for classes that support annotations ClassExpression - A boolean expression that can be used to dynamically determine membership of a class CommonMetadata - Generic metadata shared across definitions Expression - general mixin for any class that can represent some form of expression SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Extensible - mixin for classes that support extension SlotExpression - an expression that constrains the range of values a slot can take TypeExpression","title":"Mixins"},{"location":"#slots","text":"abstract - an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. alias - the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. aliases alt_description\u279esource - the source of an attributed description alt_description\u279edescription - text of an attributed description alt_descriptions apply_to - Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. class_definition\u279eapply_to slot_definition\u279eapply_to attributes - Inline definition of slots base - python base type that implements this type definition bidirectional - in addition to preconditions entailing postconditions, the postconditions entail the preconditions boolean_slot - A grouping of slots that expression a boolean operator over a list of operands all_of - holds if all of the expressions hold class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of any_of - holds if at least one of the expressions hold class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of exactly_one_of - holds if only one of the expressions hold class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of none_of - holds if none of the expressions hold class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of children_are_mutually_disjoint - If true then all direct is_a children are mutually disjoint and share no instances in common class_uri - URI of the class in an RDF environment classes - class definitions classification_rules - the collection of classification rules that apply to all members of this class code_set - the identifier of an enumeration code set. code_set_tag - the version tag of the enumeration code set code_set_version - the version identifier of the enumeration code set comments - notes and comments about an element intended for external consumption conforms_to - An established standard to which the element conforms. created_by - agent that created the element created_on - time at which the element was created deactivated - a deactivated rule is not executed by the rules engine default_curi_maps - ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables default_prefix - default and base prefix -- used for ':' identifiers, @base and @vocab default_range - default slot range to be used if range element is omitted from a slot definition defining_slots - The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom definition_uri - the \"native\" URI of the element deprecated - Description of why and when this element will no longer be used deprecated element has exact replacement - When an element is deprecated, it can be automatically replaced by this uri or curie deprecated element has possible replacement - When an element is deprecated, it can be potentially replaced by this uri or curie description - a description of the element's purpose and use designates_type - True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition disjoint_with - Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances class_definition\u279edisjoint_with slot_definition\u279edisjoint_with domain - defines the type of the subject of the slot. Given the following slot definition domain_of - the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context elseconditions - an expression that must hold for an instance of the class, if the preconditions no not hold emit_prefixes - a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. enums - enumerated ranges examples - example usages of an element extension\u279etag - a tag associated with an extension extension\u279evalue - the actual annotation extensions - a tag/text tuple attached to an arbitrary element annotations - a collection of tag/text tuples with the semantics of OWL Annotation followed_by - in a sequential list, this indicates the next member path_expression\u279efollowed_by from_schema - id of the schema that defined the element generation_date - date and time that the schema was loaded/generated id - The official schema URI id_prefixes - the identifier of this class or slot must begin with the URIs referenced by this prefix identifier - True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container ifabsent - function that provides a default value for the slot. Possible values for this slot are defined in imported_from - the imports entry that this element was derived from. Empty means primary source imports - other schemas that are included in this schema in_subset - used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) inherited - true means that the value of a slot is inherited by subclasses inlined - True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. inlined_as_list - True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. inverse - indicates that any instance of d s r implies that there is also an instance of r s' d is_a - specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a is_class_field - indicates that any instance, i, the domain of this slot will include an assert of i s range is_grouping_slot - true if this slot is a grouping slot is_usage_slot - True means that this slot was defined in a slot_usage situation key - True means that the key slot(s) uniquely identify the container. last_updated_on - time at which the element was last updated license - license for the schema list_value_specification_constant - Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant all_members - the value of the multiavlued slot is a list where all elements conform to the specified values. equals_number_in - the slot must have range number and the value of the slot must equal one of the specified values equals_string_in - the slot must have range string and the value of the slot must equal one of the specified values has_member - the values of the slot is multivalued with at least one member satisfying the condition local_name_source - the ncname of the source of the name local_name_value - a name assigned to an element in a given ontology local_names mappings - A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. broad mappings - A list of terms from different schemas or terminology systems that have broader meaning. close mappings - A list of terms from different schemas or terminology systems that have close meaning. exact mappings - A list of terms from different schemas or terminology systems that have identical meaning. narrow mappings - A list of terms from different schemas or terminology systems that have narrower meaning. related mappings - A list of terms from different schemas or terminology systems that have related meaning. maximum_value - for slots with ranges of type number, the value must be equal to or lowe than this meaning - the value meaning (in the 11179 sense) of a permissible value metamodel_version - Version of the metamodel used to load the schema minimum_value - for slots with ranges of type number, the value must be equal to or higher than this mixin - this slot or class can only be used as a mixin. mixins - List of definitions to be mixed in. Targets may be any definition of the same type class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins modified_by - agent that modified the element multivalued - true means that slot can have more than one value name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. schema_definition\u279ename notes - editorial notes about an element intended for internal consumption open_world - if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these owned_by - agent that owns or is the steward of the element owner - the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot path_rule - a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts pattern - the string value of the slot must conform to this regular expression permissible_values - A list of possible values for a slot range postconditions - an expression that must hold for an instance of the class, if the preconditions hold precedence - the relative order in which the element occurs preconditions - an expression that must hold in order for the rule to be applicable to an instance prefix_prefix - the nsname (sans ':' for a given prefix) prefix_reference - A URI associated with a given prefix prefixes - prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes pv_formula - Defines the specific formula to be used to generate the permissible values. range - defines the type of the object of the slot. Given the following slot definition range_expression - A range that is described as a boolean expression combining existing ranges readonly - If present, slot is read only. Text explains why recommended - true means that the slot should be present in the loaded definition, but this is not required relational_logical_characteristic - A property of a slot that pertains to its logical properties asymmetric - If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i irreflexive - If s is irreflexive, then there exists no i such i.s=i locally_reflexive - If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i reflexive - If s is reflexive, then i.s=i for all instances i symmetric - If s is symmetric, and i.s=v, then v.s=i transitive - If s is transitive, and i.s=z, and s.s=j, then i.s=j relational_role - the role a slot on a relationship class plays, for example, the subject, object or predicate roles repr - the name of the python object that implements this type definition represents_relationship - true if this class represents a relationship rather than an entity required - true means that the slot must be present in the loaded definition reversed - true if the slot is to be inversed role - the role played by the slot range rules - the collection of rules that apply to all members of this class class_definition\u279erules see_also - a reference singular_name - a name that is used in the singular form slot_conditions - the redefinition of a slot in the context of the containing class definition. schema_definition\u279eslots - slot definitions slot_group - allows for grouping of related slots into a grouping slot that serves the role of a group slot_names_unique - if true then induced/mangled slot names are not created for class_usage and attributes slot_uri - predicate of this slot for semantic web application slot_usage - the redefinition of a slot in the context of the containing class definition. slots - list of slot names that are applicable to a class source - A related resource from which the element is derived. source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema status - status of the element string_serialization - Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. subclass_of - rdfs:subClassOf to be emitted in OWL generation subproperty_of - Ontology property which this slot is a subproperty of subsets - list of subsets referenced in this model text title - the official title of the element todos - Outstanding issue that needs resolution transitive_form_of - If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive reflexive_transitive_form_of - transitive_form_of including the reflexive case traverse - the slot to traverse tree_root - indicator that this is the root class in tree structures type_definition\u279euri - The uri that defines the possible values for the type definition typeof - Names a parent type types - data types used in the model union_of - indicates that the domain class consists exactly of the members of the classes in the range unique_key_name - name of the unique key unique_key_slots - list of slot names that form a key unique_keys - Set of unique keys for this slot usage_slot_name - The name of the slot referenced in the slot_usage value - example value example\u279edescription - description of what the value is doing value_specification_constant - Grouping for metamodel slots that constrain the a slot value to equal a specified constant equals_expression - the value of the slot must equal the value of the evaluated expression equals_number - the slot must have range of a number and the value of the slot must equal the specified value equals_string - the slot must have range string and the value of the slot must equal the specified value maximum_cardinality - the maximum number of entries for a multivalued slot minimum_cardinality - the minimum number of entries for a multivalued slot value_presence - if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) values_from - the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot version - particular version of schema","title":"Slots"},{"location":"#enums","text":"presence_enum - enumeration of conditions by which a slot value should be set pv_formula_options - The formula used to generate the set of permissible values from the code_set values relational_role_enum - enumeration of roles a slot on a relationship class can play","title":"Enums"},{"location":"#subsets","text":"Owl - Set of slots that appear in the OWL representation of a model","title":"Subsets"},{"location":"#types","text":"","title":"Types"},{"location":"#built-in","text":"Bool Decimal ElementIdentifier NCName NodeIdentifier URI URIorCURIE XSDDate XSDDateTime XSDTime float int str","title":"Built in"},{"location":"#defined","text":"Boolean ( Bool ) - A binary (true or false) value Date ( XSDDate ) - a date (year, month and day) in an idealized calendar Datetime ( XSDDateTime ) - The combination of a date and time Decimal ( Decimal ) - A real number with arbitrary precision that conforms to the xsd:decimal specification Double ( float ) - A real number that conforms to the xsd:double specification Float ( float ) - A real number that conforms to the xsd:float specification Integer ( int ) - An integer Ncname ( NCName ) - Prefix part of CURIE Nodeidentifier ( NodeIdentifier ) - A URI, CURIE or BNODE that represents a node in a model. Objectidentifier ( ElementIdentifier ) - A URI or CURIE that represents an object in the model. String ( str ) - A character string Time ( XSDTime ) - A time object represents a (local) time of day, independent of any particular day Uri ( URI ) - a complete URI Uriorcurie ( URIorCURIE ) - a URI or a CURIE","title":"Defined"},{"location":"AltDescription/","text":"Class: alt_description an attributed description URI: linkml:AltDescription Referenced by Class Element alt_descriptions 0..* AltDescription Attributes Own alt_description\u279esource 1..1 Description: the source of an attributed description Range: String alt_description\u279edescription 1..1 Description: text of an attributed description Range: String","title":"Class: alt_description"},{"location":"AltDescription/#class-alt_description","text":"an attributed description URI: linkml:AltDescription","title":"Class: alt_description"},{"location":"AltDescription/#referenced-by-class","text":"Element alt_descriptions 0..* AltDescription","title":"Referenced by Class"},{"location":"AltDescription/#attributes","text":"","title":"Attributes"},{"location":"AltDescription/#own","text":"alt_description\u279esource 1..1 Description: the source of an attributed description Range: String alt_description\u279edescription 1..1 Description: text of an attributed description Range: String","title":"Own"},{"location":"Annotatable/","text":"Class: annotatable mixin for classes that support annotations URI: linkml:Annotatable Mixin for Annotation (mixin) - a tag/value pair with the semantics of OWL Annotation AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class Referenced by Class Attributes Own annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Class: annotatable"},{"location":"Annotatable/#class-annotatable","text":"mixin for classes that support annotations URI: linkml:Annotatable","title":"Class: annotatable"},{"location":"Annotatable/#mixin-for","text":"Annotation (mixin) - a tag/value pair with the semantics of OWL Annotation AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class","title":"Mixin for"},{"location":"Annotatable/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"Annotatable/#attributes","text":"","title":"Attributes"},{"location":"Annotatable/#own","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Own"},{"location":"Annotation/","text":"Class: annotation a tag/value pair with the semantics of OWL Annotation URI: linkml:Annotation Parents is_a: Extension - a tag/value pair used to add non-model information to an entry Uses Mixin mixin: Annotatable - mixin for classes that support annotations Referenced by Class Annotatable annotations 0..* Annotation Attributes Own annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Inherited from extension: extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Class: annotation"},{"location":"Annotation/#class-annotation","text":"a tag/value pair with the semantics of OWL Annotation URI: linkml:Annotation","title":"Class: annotation"},{"location":"Annotation/#parents","text":"is_a: Extension - a tag/value pair used to add non-model information to an entry","title":"Parents"},{"location":"Annotation/#uses-mixin","text":"mixin: Annotatable - mixin for classes that support annotations","title":"Uses Mixin"},{"location":"Annotation/#referenced-by-class","text":"Annotatable annotations 0..* Annotation","title":"Referenced by Class"},{"location":"Annotation/#attributes","text":"","title":"Attributes"},{"location":"Annotation/#own","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Own"},{"location":"Annotation/#inherited-from-extension","text":"extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Inherited from extension:"},{"location":"AnonymousClassExpression/","text":"Class: anonymous_class_expression URI: linkml:AnonymousClassExpression Parents is_a: AnonymousExpression Uses Mixin mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class Referenced by Class ClassExpression class_expression\u279eall_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eany_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eexactly_one_of 0..* AnonymousClassExpression ClassExpression class_expression\u279enone_of 0..* AnonymousClassExpression ClassDefinition classification_rules 0..* AnonymousClassExpression None elseconditions 0..1 AnonymousClassExpression None postconditions 0..1 AnonymousClassExpression None preconditions 0..1 AnonymousClassExpression SlotExpression range_expression 0..1 AnonymousClassExpression Attributes Own is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition Mixed in from class_expression: class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Class: anonymous_class_expression"},{"location":"AnonymousClassExpression/#class-anonymous_class_expression","text":"URI: linkml:AnonymousClassExpression","title":"Class: anonymous_class_expression"},{"location":"AnonymousClassExpression/#parents","text":"is_a: AnonymousExpression","title":"Parents"},{"location":"AnonymousClassExpression/#uses-mixin","text":"mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class","title":"Uses Mixin"},{"location":"AnonymousClassExpression/#referenced-by-class","text":"ClassExpression class_expression\u279eall_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eany_of 0..* AnonymousClassExpression ClassExpression class_expression\u279eexactly_one_of 0..* AnonymousClassExpression ClassExpression class_expression\u279enone_of 0..* AnonymousClassExpression ClassDefinition classification_rules 0..* AnonymousClassExpression None elseconditions 0..1 AnonymousClassExpression None postconditions 0..1 AnonymousClassExpression None preconditions 0..1 AnonymousClassExpression SlotExpression range_expression 0..1 AnonymousClassExpression","title":"Referenced by Class"},{"location":"AnonymousClassExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousClassExpression/#own","text":"is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition","title":"Own"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression","text":"class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_1","text":"class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_2","text":"class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_3","text":"class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"AnonymousClassExpression/#mixed-in-from-class_expression_4","text":"slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Mixed in from class_expression:"},{"location":"AnonymousExpression/","text":"Class: anonymous_expression URI: linkml:AnonymousExpression Uses Mixin mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Children AnonymousClassExpression AnonymousSlotExpression Referenced by Class Attributes Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: anonymous_expression"},{"location":"AnonymousExpression/#class-anonymous_expression","text":"URI: linkml:AnonymousExpression","title":"Class: anonymous_expression"},{"location":"AnonymousExpression/#uses-mixin","text":"mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"AnonymousExpression/#children","text":"AnonymousClassExpression AnonymousSlotExpression","title":"Children"},{"location":"AnonymousExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"AnonymousExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousExpression/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"AnonymousExpression/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"AnonymousExpression/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"AnonymousSlotExpression/","text":"Class: anonymous_slot_expression URI: linkml:AnonymousSlotExpression Parents is_a: AnonymousExpression Uses Mixin mixin: SlotExpression - an expression that constrains the range of values a slot can take Referenced by Class None has_member 0..1 AnonymousSlotExpression SlotExpression slot_expression\u279eall_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eany_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eexactly_one_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279enone_of 0..* AnonymousSlotExpression Attributes Mixed in from slot_expression: range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) Mixed in from slot_expression: range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression Mixed in from slot_expression: required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean Mixed in from slot_expression: recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean Mixed in from slot_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from slot_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from slot_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from slot_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from slot_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from slot_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from slot_expression: equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String Mixed in from slot_expression: minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression Mixed in from slot_expression: all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) Mixed in from slot_expression: slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Class: anonymous_slot_expression"},{"location":"AnonymousSlotExpression/#class-anonymous_slot_expression","text":"URI: linkml:AnonymousSlotExpression","title":"Class: anonymous_slot_expression"},{"location":"AnonymousSlotExpression/#parents","text":"is_a: AnonymousExpression","title":"Parents"},{"location":"AnonymousSlotExpression/#uses-mixin","text":"mixin: SlotExpression - an expression that constrains the range of values a slot can take","title":"Uses Mixin"},{"location":"AnonymousSlotExpression/#referenced-by-class","text":"None has_member 0..1 AnonymousSlotExpression SlotExpression slot_expression\u279eall_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eany_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279eexactly_one_of 0..* AnonymousSlotExpression SlotExpression slot_expression\u279enone_of 0..* AnonymousSlotExpression","title":"Referenced by Class"},{"location":"AnonymousSlotExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression","text":"range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md)","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_1","text":"range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_2","text":"required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_3","text":"recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_6","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_7","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_8","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_9","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_10","text":"equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_11","text":"minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_12","text":"maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_13","text":"has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_14","text":"all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md)","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_15","text":"slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_16","text":"slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_17","text":"slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousSlotExpression/#mixed-in-from-slot_expression_18","text":"slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"AnonymousTypeExpression/","text":"Class: anonymous_type_expression URI: linkml:AnonymousTypeExpression Uses Mixin mixin: TypeExpression Referenced by Class TypeExpression type_expression\u279eall_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eany_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eexactly_one_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279enone_of 0..* AnonymousTypeExpression Attributes Mixed in from type_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from type_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from type_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from type_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from type_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from type_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from type_expression: type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Class: anonymous_type_expression"},{"location":"AnonymousTypeExpression/#class-anonymous_type_expression","text":"URI: linkml:AnonymousTypeExpression","title":"Class: anonymous_type_expression"},{"location":"AnonymousTypeExpression/#uses-mixin","text":"mixin: TypeExpression","title":"Uses Mixin"},{"location":"AnonymousTypeExpression/#referenced-by-class","text":"TypeExpression type_expression\u279eall_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eany_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279eexactly_one_of 0..* AnonymousTypeExpression TypeExpression type_expression\u279enone_of 0..* AnonymousTypeExpression","title":"Referenced by Class"},{"location":"AnonymousTypeExpression/#attributes","text":"","title":"Attributes"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_1","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_2","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_3","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_6","text":"type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_7","text":"type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_8","text":"type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"AnonymousTypeExpression/#mixed-in-from-type_expression_9","text":"type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"Boolean/","text":"Type: boolean A binary (true or false) value URI: linkml:Boolean Root (builtin) type Bool Representation bool","title":"Type: boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: linkml:Boolean Root (builtin) type Bool Representation bool","title":"Type: boolean"},{"location":"ClassDefinition/","text":"Class: class_definition the definition of a class or interface URI: linkml:ClassDefinition Parents is_a: Definition - base class for definitions Uses Mixin mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class Referenced by Class ClassDefinition class_definition\u279eapply_to 0..* ClassDefinition ClassDefinition class_definition\u279edisjoint_with 0..* ClassDefinition ClassDefinition class_definition\u279eis_a 0..1 ClassDefinition ClassDefinition class_definition\u279emixins 0..* ClassDefinition SchemaDefinition classes 0..* ClassDefinition SlotDefinition domain 0..1 ClassDefinition SlotDefinition domain_of 0..* ClassDefinition ClassDefinition union_of 0..* ClassDefinition Attributes Own slots 0..* Description: list of slot names that are applicable to a class Range: SlotDefinition slot_usage 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition attributes 0..* Description: Inline definition of slots Range: SlotDefinition class_uri 0..1 Description: URI of the class in an RDF environment Range: Uriorcurie subclass_of 0..1 Description: rdfs:subClassOf to be emitted in OWL generation Range: Uriorcurie union_of 0..* Description: indicates that the domain class consists exactly of the members of the classes in the range Range: ClassDefinition defining_slots 0..* Description: The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom Range: SlotDefinition tree_root 0..1 Description: indicator that this is the root class in tree structures Range: Boolean unique_keys 0..* Description: Set of unique keys for this slot Range: UniqueKey class_definition\u279erules 0..* Description: the collection of rules that apply to all members of this class Range: ClassRule classification_rules 0..* Description: the collection of classification rules that apply to all members of this class Range: AnonymousClassExpression slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean represents_relationship 0..1 Description: true if this class represents a relationship rather than an entity Range: Boolean class_definition\u279edisjoint_with 0..* Description: Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances Range: ClassDefinition children_are_mutually_disjoint 0..1 Description: If true then all direct is_a children are mutually disjoint and share no instances in common Range: Boolean class_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: ClassDefinition class_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: ClassDefinition class_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: ClassDefinition Inherited from definition: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String Mixed in from class_expression: class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression Mixed in from class_expression: slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition Other properties Aliases: table record template message observation Close Mappings: owl:Class","title":"Class: class_definition"},{"location":"ClassDefinition/#class-class_definition","text":"the definition of a class or interface URI: linkml:ClassDefinition","title":"Class: class_definition"},{"location":"ClassDefinition/#parents","text":"is_a: Definition - base class for definitions","title":"Parents"},{"location":"ClassDefinition/#uses-mixin","text":"mixin: ClassExpression - A boolean expression that can be used to dynamically determine membership of a class","title":"Uses Mixin"},{"location":"ClassDefinition/#referenced-by-class","text":"ClassDefinition class_definition\u279eapply_to 0..* ClassDefinition ClassDefinition class_definition\u279edisjoint_with 0..* ClassDefinition ClassDefinition class_definition\u279eis_a 0..1 ClassDefinition ClassDefinition class_definition\u279emixins 0..* ClassDefinition SchemaDefinition classes 0..* ClassDefinition SlotDefinition domain 0..1 ClassDefinition SlotDefinition domain_of 0..* ClassDefinition ClassDefinition union_of 0..* ClassDefinition","title":"Referenced by Class"},{"location":"ClassDefinition/#attributes","text":"","title":"Attributes"},{"location":"ClassDefinition/#own","text":"slots 0..* Description: list of slot names that are applicable to a class Range: SlotDefinition slot_usage 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition attributes 0..* Description: Inline definition of slots Range: SlotDefinition class_uri 0..1 Description: URI of the class in an RDF environment Range: Uriorcurie subclass_of 0..1 Description: rdfs:subClassOf to be emitted in OWL generation Range: Uriorcurie union_of 0..* Description: indicates that the domain class consists exactly of the members of the classes in the range Range: ClassDefinition defining_slots 0..* Description: The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom Range: SlotDefinition tree_root 0..1 Description: indicator that this is the root class in tree structures Range: Boolean unique_keys 0..* Description: Set of unique keys for this slot Range: UniqueKey class_definition\u279erules 0..* Description: the collection of rules that apply to all members of this class Range: ClassRule classification_rules 0..* Description: the collection of classification rules that apply to all members of this class Range: AnonymousClassExpression slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean represents_relationship 0..1 Description: true if this class represents a relationship rather than an entity Range: Boolean class_definition\u279edisjoint_with 0..* Description: Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances Range: ClassDefinition children_are_mutually_disjoint 0..1 Description: If true then all direct is_a children are mutually disjoint and share no instances in common Range: Boolean class_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: ClassDefinition class_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: ClassDefinition class_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: ClassDefinition","title":"Own"},{"location":"ClassDefinition/#inherited-from-definition","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String","title":"Inherited from definition:"},{"location":"ClassDefinition/#mixed-in-from-class_expression","text":"class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_1","text":"class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_2","text":"class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_3","text":"class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#mixed-in-from-class_expression_4","text":"slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Mixed in from class_expression:"},{"location":"ClassDefinition/#other-properties","text":"Aliases: table record template message observation Close Mappings: owl:Class","title":"Other properties"},{"location":"ClassExpression/","text":"Class: class_expression A boolean expression that can be used to dynamically determine membership of a class URI: linkml:ClassExpression Mixin for AnonymousClassExpression (mixin) ClassDefinition (mixin) - the definition of a class or interface Referenced by Class Attributes Own class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Class: class_expression"},{"location":"ClassExpression/#class-class_expression","text":"A boolean expression that can be used to dynamically determine membership of a class URI: linkml:ClassExpression","title":"Class: class_expression"},{"location":"ClassExpression/#mixin-for","text":"AnonymousClassExpression (mixin) ClassDefinition (mixin) - the definition of a class or interface","title":"Mixin for"},{"location":"ClassExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"ClassExpression/#attributes","text":"","title":"Attributes"},{"location":"ClassExpression/#own","text":"class_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousClassExpression class_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousClassExpression class_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousClassExpression class_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousClassExpression slot_conditions 0..* Description: the redefinition of a slot in the context of the containing class definition. Range: SlotDefinition","title":"Own"},{"location":"ClassLevelRule/","text":"Class: class_level_rule A rule that is applied to classes URI: linkml:ClassLevelRule Children ClassRule - A rule that applies to instances of a class Referenced by Class Attributes","title":"Class: class_level_rule"},{"location":"ClassLevelRule/#class-class_level_rule","text":"A rule that is applied to classes URI: linkml:ClassLevelRule","title":"Class: class_level_rule"},{"location":"ClassLevelRule/#children","text":"ClassRule - A rule that applies to instances of a class","title":"Children"},{"location":"ClassLevelRule/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"ClassLevelRule/#attributes","text":"","title":"Attributes"},{"location":"ClassRule/","text":"Class: class_rule A rule that applies to instances of a class URI: linkml:ClassRule Parents is_a: ClassLevelRule - A rule that is applied to classes Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class ClassDefinition class_definition\u279erules 0..* ClassRule ClassDefinition rules 0..* ClassRule Attributes Own preconditions 0..1 Description: an expression that must hold in order for the rule to be applicable to an instance Range: AnonymousClassExpression postconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions hold Range: AnonymousClassExpression elseconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions no not hold Range: AnonymousClassExpression bidirectional 0..1 Description: in addition to preconditions entailing postconditions, the postconditions entail the preconditions Range: Boolean open_world 0..1 Description: if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these Range: Boolean precedence 0..1 Description: the relative order in which the element occurs Range: Integer deactivated 0..1 Description: a deactivated rule is not executed by the rules engine Range: Boolean Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie Other properties Aliases: if rule Close Mappings: sh:TripleRule swrl:Imp","title":"Class: class_rule"},{"location":"ClassRule/#class-class_rule","text":"A rule that applies to instances of a class URI: linkml:ClassRule","title":"Class: class_rule"},{"location":"ClassRule/#parents","text":"is_a: ClassLevelRule - A rule that is applied to classes","title":"Parents"},{"location":"ClassRule/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"ClassRule/#referenced-by-class","text":"ClassDefinition class_definition\u279erules 0..* ClassRule ClassDefinition rules 0..* ClassRule","title":"Referenced by Class"},{"location":"ClassRule/#attributes","text":"","title":"Attributes"},{"location":"ClassRule/#own","text":"preconditions 0..1 Description: an expression that must hold in order for the rule to be applicable to an instance Range: AnonymousClassExpression postconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions hold Range: AnonymousClassExpression elseconditions 0..1 Description: an expression that must hold for an instance of the class, if the preconditions no not hold Range: AnonymousClassExpression bidirectional 0..1 Description: in addition to preconditions entailing postconditions, the postconditions entail the preconditions Range: Boolean open_world 0..1 Description: if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these Range: Boolean precedence 0..1 Description: the relative order in which the element occurs Range: Integer deactivated 0..1 Description: a deactivated rule is not executed by the rules engine Range: Boolean","title":"Own"},{"location":"ClassRule/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"ClassRule/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"ClassRule/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"ClassRule/#other-properties","text":"Aliases: if rule Close Mappings: sh:TripleRule swrl:Imp","title":"Other properties"},{"location":"CommonMetadata/","text":"Class: common_metadata Generic metadata shared across definitions URI: linkml:CommonMetadata Mixin for AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class Referenced by Class Attributes Own description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) alt_descriptions 0..* Range: AltDescription title 0..1 Description: the official title of the element Range: String in subsets: (owl) deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String todos 0..* Description: Outstanding issue that needs resolution Range: String notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) examples 0..* Description: example usages of an element Range: Example in subsets: (owl) in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition from_schema 0..1 Description: id of the schema that defined the element Range: Uri imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: common_metadata"},{"location":"CommonMetadata/#class-common_metadata","text":"Generic metadata shared across definitions URI: linkml:CommonMetadata","title":"Class: common_metadata"},{"location":"CommonMetadata/#mixin-for","text":"AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class","title":"Mixin for"},{"location":"CommonMetadata/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"CommonMetadata/#attributes","text":"","title":"Attributes"},{"location":"CommonMetadata/#own","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) alt_descriptions 0..* Range: AltDescription title 0..1 Description: the official title of the element Range: String in subsets: (owl) deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String todos 0..* Description: Outstanding issue that needs resolution Range: String notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) examples 0..* Description: example usages of an element Range: Example in subsets: (owl) in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition from_schema 0..1 Description: id of the schema that defined the element Range: Uri imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Own"},{"location":"Date/","text":"Type: date a date (year, month and day) in an idealized calendar URI: linkml:Date Root (builtin) type XSDDate Representation str","title":"Type: date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: linkml:Date Root (builtin) type XSDDate Representation str","title":"Type: date"},{"location":"Datetime/","text":"Type: datetime The combination of a date and time URI: linkml:Datetime Root (builtin) type XSDDateTime Representation str","title":"Type: datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: linkml:Datetime Root (builtin) type XSDDateTime Representation str","title":"Type: datetime"},{"location":"Decimal/","text":"Type: decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: linkml:Decimal Root (builtin) type Decimal","title":"Type: decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: linkml:Decimal Root (builtin) type Decimal","title":"Type: decimal"},{"location":"Definition/","text":"Class: definition base class for definitions URI: linkml:Definition Parents is_a: Element - a named element in the model Children ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot Referenced by Class Definition apply_to 0..* Definition Definition disjoint_with 0..* Definition Definition is_a 0..1 Definition Definition mixins 0..* Definition SlotDefinition owner 0..1 Definition Attributes Own is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean mixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: Definition apply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: Definition values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Other properties See also: https://en.wikipedia.org/wiki/Data_element_definition","title":"Class: definition"},{"location":"Definition/#class-definition","text":"base class for definitions URI: linkml:Definition","title":"Class: definition"},{"location":"Definition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"Definition/#children","text":"ClassDefinition - the definition of a class or interface SlotDefinition - the definition of a property or a slot","title":"Children"},{"location":"Definition/#referenced-by-class","text":"Definition apply_to 0..* Definition Definition disjoint_with 0..* Definition Definition is_a 0..1 Definition Definition mixins 0..* Definition SlotDefinition owner 0..1 Definition","title":"Referenced by Class"},{"location":"Definition/#attributes","text":"","title":"Attributes"},{"location":"Definition/#own","text":"is_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: Definition abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean mixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: Definition apply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: Definition values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String","title":"Own"},{"location":"Definition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"Definition/#other-properties","text":"See also: https://en.wikipedia.org/wiki/Data_element_definition","title":"Other properties"},{"location":"Double/","text":"Type: double A real number that conforms to the xsd:double specification URI: linkml:Double Root (builtin) type float","title":"Type: double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: linkml:Double Root (builtin) type float","title":"Type: double"},{"location":"Element/","text":"Class: element a named element in the model URI: linkml:Element Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Children Definition - base class for definitions EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition. Referenced by Class SlotDefinition range 0..1 Element Attributes Own name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie Other properties See also: https://en.wikipedia.org/wiki/Data_element","title":"Class: element"},{"location":"Element/#class-element","text":"a named element in the model URI: linkml:Element","title":"Class: element"},{"location":"Element/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"Element/#children","text":"Definition - base class for definitions EnumDefinition - List of values that constrain the range of a slot SchemaDefinition - a collection of subset, type, slot and class definitions SubsetDefinition - the name and description of a subset TypeDefinition - A data type definition.","title":"Children"},{"location":"Element/#referenced-by-class","text":"SlotDefinition range 0..1 Element","title":"Referenced by Class"},{"location":"Element/#attributes","text":"","title":"Attributes"},{"location":"Element/#own","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Own"},{"location":"Element/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"Element/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"Element/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Element/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Element/#other-properties","text":"See also: https://en.wikipedia.org/wiki/Data_element","title":"Other properties"},{"location":"EnumDefinition/","text":"Class: enum_definition List of values that constrain the range of a slot URI: linkml:EnumDefinition Parents is_a: Element - a named element in the model Referenced by Class SchemaDefinition enums 0..* EnumDefinition Attributes Own code_set 0..1 Description: the identifier of an enumeration code set. Range: Uriorcurie code_set_tag 0..1 Description: the version tag of the enumeration code set Range: String code_set_version 0..1 Description: the version identifier of the enumeration code set Range: String pv_formula 0..1 Description: Defines the specific formula to be used to generate the permissible values. Range: pv_formula_options permissible_values 0..* Description: A list of possible values for a slot range Range: PermissibleValue Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Other properties Close Mappings: qb:HierarchicalCodeList","title":"Class: enum_definition"},{"location":"EnumDefinition/#class-enum_definition","text":"List of values that constrain the range of a slot URI: linkml:EnumDefinition","title":"Class: enum_definition"},{"location":"EnumDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"EnumDefinition/#referenced-by-class","text":"SchemaDefinition enums 0..* EnumDefinition","title":"Referenced by Class"},{"location":"EnumDefinition/#attributes","text":"","title":"Attributes"},{"location":"EnumDefinition/#own","text":"code_set 0..1 Description: the identifier of an enumeration code set. Range: Uriorcurie code_set_tag 0..1 Description: the version tag of the enumeration code set Range: String code_set_version 0..1 Description: the version identifier of the enumeration code set Range: String pv_formula 0..1 Description: Defines the specific formula to be used to generate the permissible values. Range: pv_formula_options permissible_values 0..* Description: A list of possible values for a slot range Range: PermissibleValue","title":"Own"},{"location":"EnumDefinition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"EnumDefinition/#other-properties","text":"Close Mappings: qb:HierarchicalCodeList","title":"Other properties"},{"location":"Example/","text":"Class: example usage example and description URI: linkml:Example Referenced by Class Element examples 0..* Example Attributes Own value 0..1 Description: example value Range: String example\u279edescription 0..1 Description: description of what the value is doing Range: String","title":"Class: example"},{"location":"Example/#class-example","text":"usage example and description URI: linkml:Example","title":"Class: example"},{"location":"Example/#referenced-by-class","text":"Element examples 0..* Example","title":"Referenced by Class"},{"location":"Example/#attributes","text":"","title":"Attributes"},{"location":"Example/#own","text":"value 0..1 Description: example value Range: String example\u279edescription 0..1 Description: description of what the value is doing Range: String","title":"Own"},{"location":"Expression/","text":"Class: expression general mixin for any class that can represent some form of expression URI: linkml:Expression Children SlotExpression - an expression that constrains the range of values a slot can take TypeExpression Mixin for AnonymousExpression (mixin) PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups Referenced by Class None all_of 0..* Expression None any_of 0..* Expression None boolean_slot 0..* Expression None exactly_one_of 0..* Expression None followed_by 0..1 Expression None none_of 0..* Expression Attributes","title":"Class: expression"},{"location":"Expression/#class-expression","text":"general mixin for any class that can represent some form of expression URI: linkml:Expression","title":"Class: expression"},{"location":"Expression/#children","text":"SlotExpression - an expression that constrains the range of values a slot can take TypeExpression","title":"Children"},{"location":"Expression/#mixin-for","text":"AnonymousExpression (mixin) PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups","title":"Mixin for"},{"location":"Expression/#referenced-by-class","text":"None all_of 0..* Expression None any_of 0..* Expression None boolean_slot 0..* Expression None exactly_one_of 0..* Expression None followed_by 0..1 Expression None none_of 0..* Expression","title":"Referenced by Class"},{"location":"Expression/#attributes","text":"","title":"Attributes"},{"location":"Extensible/","text":"Class: extensible mixin for classes that support extension URI: linkml:Extensible Mixin for AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class Referenced by Class Attributes Own extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Class: extensible"},{"location":"Extensible/#class-extensible","text":"mixin for classes that support extension URI: linkml:Extensible","title":"Class: extensible"},{"location":"Extensible/#mixin-for","text":"AnonymousExpression (mixin) ClassRule (mixin) - A rule that applies to instances of a class Element (mixin) - a named element in the model PathExpression (mixin) - An expression that describes an abstract path from an object to another through a sequence of slot lookups PermissibleValue (mixin) - a permissible value, accompanied by intended text and an optional mapping to a concept URI UniqueKey (mixin) - a collection of slots whose values uniquely identify an instance of a class","title":"Mixin for"},{"location":"Extensible/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"Extensible/#attributes","text":"","title":"Attributes"},{"location":"Extensible/#own","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Own"},{"location":"Extension/","text":"Class: extension a tag/value pair used to add non-model information to an entry URI: linkml:Extension Children Annotation - a tag/value pair with the semantics of OWL Annotation Referenced by Class Extensible extensions 0..* Extension Attributes Own extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Class: extension"},{"location":"Extension/#class-extension","text":"a tag/value pair used to add non-model information to an entry URI: linkml:Extension","title":"Class: extension"},{"location":"Extension/#children","text":"Annotation - a tag/value pair with the semantics of OWL Annotation","title":"Children"},{"location":"Extension/#referenced-by-class","text":"Extensible extensions 0..* Extension","title":"Referenced by Class"},{"location":"Extension/#attributes","text":"","title":"Attributes"},{"location":"Extension/#own","text":"extension\u279etag 1..1 Description: a tag associated with an extension Range: Uriorcurie extension\u279evalue 1..1 Description: the actual annotation Range: String extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Own"},{"location":"Float/","text":"Type: float A real number that conforms to the xsd:float specification URI: linkml:Float Root (builtin) type float","title":"Type: float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: linkml:Float Root (builtin) type float","title":"Type: float"},{"location":"Integer/","text":"Type: integer An integer URI: linkml:Integer Root (builtin) type int","title":"Type: integer"},{"location":"Integer/#type-integer","text":"An integer URI: linkml:Integer Root (builtin) type int","title":"Type: integer"},{"location":"LocalName/","text":"Class: local_name an attributed label URI: linkml:LocalName Referenced by Class Element local_names 0..* LocalName Attributes Own local_name_source 1..1 Description: the ncname of the source of the name Range: Ncname local_name_value 1..1 Description: a name assigned to an element in a given ontology Range: String","title":"Class: local_name"},{"location":"LocalName/#class-local_name","text":"an attributed label URI: linkml:LocalName","title":"Class: local_name"},{"location":"LocalName/#referenced-by-class","text":"Element local_names 0..* LocalName","title":"Referenced by Class"},{"location":"LocalName/#attributes","text":"","title":"Attributes"},{"location":"LocalName/#own","text":"local_name_source 1..1 Description: the ncname of the source of the name Range: Ncname local_name_value 1..1 Description: a name assigned to an element in a given ontology Range: String","title":"Own"},{"location":"Ncname/","text":"Type: ncname Prefix part of CURIE URI: linkml:Ncname Root (builtin) type NCName Representation str","title":"Type: ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: linkml:Ncname Root (builtin) type NCName Representation str","title":"Type: ncname"},{"location":"Nodeidentifier/","text":"Type: nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: linkml:Nodeidentifier Root (builtin) type NodeIdentifier Representation str","title":"Type: nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: linkml:Nodeidentifier Root (builtin) type NodeIdentifier Representation str","title":"Type: nodeidentifier"},{"location":"Objectidentifier/","text":"Type: objectidentifier A URI or CURIE that represents an object in the model. URI: linkml:Objectidentifier Root (builtin) type ElementIdentifier Representation str Other properties Comments: Used for inheritence and type checking","title":"Type: objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: linkml:Objectidentifier Root (builtin) type ElementIdentifier Representation str","title":"Type: objectidentifier"},{"location":"Objectidentifier/#other-properties","text":"Comments: Used for inheritence and type checking","title":"Other properties"},{"location":"Owl/","text":"Subset: owl Set of slots that appear in the OWL representation of a model URI: linkml:owl Classes Mixins Slots comments - notes and comments about an element intended for external consumption description - a description of the element's purpose and use examples - example usages of an element generation_date - date and time that the schema was loaded/generated license - license for the schema metamodel_version - Version of the metamodel used to load the schema name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. notes - editorial notes about an element intended for internal consumption schema_definition\u279ename see_also - a reference source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema title - the official title of the element version - particular version of schema Types Enums","title":"Subset: owl"},{"location":"Owl/#subset-owl","text":"Set of slots that appear in the OWL representation of a model URI: linkml:owl","title":"Subset: owl"},{"location":"Owl/#classes","text":"","title":"Classes"},{"location":"Owl/#mixins","text":"","title":"Mixins"},{"location":"Owl/#slots","text":"comments - notes and comments about an element intended for external consumption description - a description of the element's purpose and use examples - example usages of an element generation_date - date and time that the schema was loaded/generated license - license for the schema metamodel_version - Version of the metamodel used to load the schema name - the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. notes - editorial notes about an element intended for internal consumption schema_definition\u279ename see_also - a reference source_file - name, uri or description of the source of the schema source_file_date - modification date of the source of the schema source_file_size - size in bytes of the source of the schema title - the official title of the element version - particular version of schema","title":"Slots"},{"location":"Owl/#types","text":"","title":"Types"},{"location":"Owl/#enums","text":"","title":"Enums"},{"location":"PathExpression/","text":"Class: path_expression An expression that describes an abstract path from an object to another through a sequence of slot lookups URI: linkml:PathExpression Uses Mixin mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class PathExpression path_expression\u279eall_of 0..* PathExpression PathExpression path_expression\u279eany_of 0..* PathExpression PathExpression path_expression\u279eexactly_one_of 0..* PathExpression PathExpression path_expression\u279efollowed_by 0..1 PathExpression PathExpression path_expression\u279enone_of 0..* PathExpression SlotDefinition path_rule 0..1 PathExpression Attributes Own path_expression\u279efollowed_by 0..1 Description: in a sequential list, this indicates the next member Range: PathExpression path_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: PathExpression path_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: PathExpression path_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: PathExpression path_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: PathExpression reversed 0..1 Description: true if the slot is to be inversed Range: Boolean traverse 0..1 Description: the slot to traverse Range: SlotDefinition range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: path_expression"},{"location":"PathExpression/#class-path_expression","text":"An expression that describes an abstract path from an object to another through a sequence of slot lookups URI: linkml:PathExpression","title":"Class: path_expression"},{"location":"PathExpression/#uses-mixin","text":"mixin: Expression - general mixin for any class that can represent some form of expression mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"PathExpression/#referenced-by-class","text":"PathExpression path_expression\u279eall_of 0..* PathExpression PathExpression path_expression\u279eany_of 0..* PathExpression PathExpression path_expression\u279eexactly_one_of 0..* PathExpression PathExpression path_expression\u279efollowed_by 0..1 PathExpression PathExpression path_expression\u279enone_of 0..* PathExpression SlotDefinition path_rule 0..1 PathExpression","title":"Referenced by Class"},{"location":"PathExpression/#attributes","text":"","title":"Attributes"},{"location":"PathExpression/#own","text":"path_expression\u279efollowed_by 0..1 Description: in a sequential list, this indicates the next member Range: PathExpression path_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: PathExpression path_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: PathExpression path_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: PathExpression path_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: PathExpression reversed 0..1 Description: true if the slot is to be inversed Range: Boolean traverse 0..1 Description: the slot to traverse Range: SlotDefinition range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression","title":"Own"},{"location":"PathExpression/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"PathExpression/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"PathExpression/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PathExpression/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/","text":"Class: permissible_value a permissible value, accompanied by intended text and an optional mapping to a concept URI URI: linkml:PermissibleValue Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class PermissibleValue permissible_value\u279eis_a 0..1 PermissibleValue PermissibleValue permissible_value\u279emixins 0..* PermissibleValue EnumDefinition permissible_values 0..* PermissibleValue Attributes Own text 1..1 Range: String description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) meaning 0..1 Description: the value meaning (in the 11179 sense) of a permissible value Range: Uriorcurie permissible_value\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: PermissibleValue permissible_value\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: PermissibleValue Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie Other properties Aliases: PV","title":"Class: permissible_value"},{"location":"PermissibleValue/#class-permissible_value","text":"a permissible value, accompanied by intended text and an optional mapping to a concept URI URI: linkml:PermissibleValue","title":"Class: permissible_value"},{"location":"PermissibleValue/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"PermissibleValue/#referenced-by-class","text":"PermissibleValue permissible_value\u279eis_a 0..1 PermissibleValue PermissibleValue permissible_value\u279emixins 0..* PermissibleValue EnumDefinition permissible_values 0..* PermissibleValue","title":"Referenced by Class"},{"location":"PermissibleValue/#attributes","text":"","title":"Attributes"},{"location":"PermissibleValue/#own","text":"text 1..1 Range: String description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) meaning 0..1 Description: the value meaning (in the 11179 sense) of a permissible value Range: Uriorcurie permissible_value\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: PermissibleValue permissible_value\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: PermissibleValue","title":"Own"},{"location":"PermissibleValue/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"PermissibleValue/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_1","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_2","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_3","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_4","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_5","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_6","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_7","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_8","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_9","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_10","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_11","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_12","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#mixed-in-from-common_metadata_13","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"PermissibleValue/#other-properties","text":"Aliases: PV","title":"Other properties"},{"location":"Prefix/","text":"Class: prefix prefix URI tuple URI: linkml:Prefix Referenced by Class SchemaDefinition prefixes 0..* Prefix Attributes Own prefix_prefix 1..1 Description: the nsname (sans ':' for a given prefix) Range: Ncname prefix_reference 1..1 Description: A URI associated with a given prefix Range: Uri","title":"Class: prefix"},{"location":"Prefix/#class-prefix","text":"prefix URI tuple URI: linkml:Prefix","title":"Class: prefix"},{"location":"Prefix/#referenced-by-class","text":"SchemaDefinition prefixes 0..* Prefix","title":"Referenced by Class"},{"location":"Prefix/#attributes","text":"","title":"Attributes"},{"location":"Prefix/#own","text":"prefix_prefix 1..1 Description: the nsname (sans ':' for a given prefix) Range: Ncname prefix_reference 1..1 Description: A URI associated with a given prefix Range: Uri","title":"Own"},{"location":"SchemaDefinition/","text":"Class: schema_definition a collection of subset, type, slot and class definitions URI: linkml:SchemaDefinition Parents is_a: Element - a named element in the model Referenced by Class Attributes Own id 1..1 Description: The official schema URI Range: Uri version 0..1 Description: particular version of schema Range: String in subsets: (owl) imports 0..* Description: other schemas that are included in this schema Range: Uriorcurie license 0..1 Description: license for the schema Range: String in subsets: (owl) prefixes 0..* Description: prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes Range: Prefix emit_prefixes 0..* Description: a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. Range: Ncname default_curi_maps 0..* Description: ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables Range: String default_prefix 0..1 Description: default and base prefix -- used for ':' identifiers, @base and @vocab Range: String default_range 0..1 Description: default slot range to be used if range element is omitted from a slot definition Range: TypeDefinition subsets 0..* Description: list of subsets referenced in this model Range: SubsetDefinition types 0..* Description: data types used in the model Range: TypeDefinition enums 0..* Description: enumerated ranges Range: EnumDefinition schema_definition\u279eslots 0..* Description: slot definitions Range: SlotDefinition classes 0..* Description: class definitions Range: ClassDefinition metamodel_version 0..1 Description: Version of the metamodel used to load the schema Range: String in subsets: (owl) source_file 0..1 Description: name, uri or description of the source of the schema Range: String in subsets: (owl) source_file_date 0..1 Description: modification date of the source of the schema Range: Datetime in subsets: (owl) source_file_size 0..1 Description: size in bytes of the source of the schema Range: Integer in subsets: (owl) generation_date 0..1 Description: date and time that the schema was loaded/generated Range: Datetime in subsets: (owl) slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean schema_definition\u279ename 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: Ncname in subsets: (owl) Inherited from element: id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Other properties Aliases: data dictionary See also: https://en.wikipedia.org/wiki/Data_dictionary","title":"Class: schema_definition"},{"location":"SchemaDefinition/#class-schema_definition","text":"a collection of subset, type, slot and class definitions URI: linkml:SchemaDefinition","title":"Class: schema_definition"},{"location":"SchemaDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"SchemaDefinition/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"SchemaDefinition/#attributes","text":"","title":"Attributes"},{"location":"SchemaDefinition/#own","text":"id 1..1 Description: The official schema URI Range: Uri version 0..1 Description: particular version of schema Range: String in subsets: (owl) imports 0..* Description: other schemas that are included in this schema Range: Uriorcurie license 0..1 Description: license for the schema Range: String in subsets: (owl) prefixes 0..* Description: prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes Range: Prefix emit_prefixes 0..* Description: a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. Range: Ncname default_curi_maps 0..* Description: ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables Range: String default_prefix 0..1 Description: default and base prefix -- used for ':' identifiers, @base and @vocab Range: String default_range 0..1 Description: default slot range to be used if range element is omitted from a slot definition Range: TypeDefinition subsets 0..* Description: list of subsets referenced in this model Range: SubsetDefinition types 0..* Description: data types used in the model Range: TypeDefinition enums 0..* Description: enumerated ranges Range: EnumDefinition schema_definition\u279eslots 0..* Description: slot definitions Range: SlotDefinition classes 0..* Description: class definitions Range: ClassDefinition metamodel_version 0..1 Description: Version of the metamodel used to load the schema Range: String in subsets: (owl) source_file 0..1 Description: name, uri or description of the source of the schema Range: String in subsets: (owl) source_file_date 0..1 Description: modification date of the source of the schema Range: Datetime in subsets: (owl) source_file_size 0..1 Description: size in bytes of the source of the schema Range: Integer in subsets: (owl) generation_date 0..1 Description: date and time that the schema was loaded/generated Range: Datetime in subsets: (owl) slot_names_unique 0..1 Description: if true then induced/mangled slot names are not created for class_usage and attributes Range: Boolean schema_definition\u279ename 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: Ncname in subsets: (owl)","title":"Own"},{"location":"SchemaDefinition/#inherited-from-element","text":"id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"SchemaDefinition/#other-properties","text":"Aliases: data dictionary See also: https://en.wikipedia.org/wiki/Data_dictionary","title":"Other properties"},{"location":"SlotDefinition/","text":"Class: slot_definition the definition of a property or a slot URI: linkml:SlotDefinition Parents is_a: Definition - base class for definitions Uses Mixin mixin: SlotExpression - an expression that constrains the range of values a slot can take Referenced by Class None all_members 0..* SlotDefinition ClassDefinition attributes 0..* SlotDefinition ClassDefinition defining_slots 0..* SlotDefinition SlotDefinition inverse 0..1 SlotDefinition None reflexive_transitive_form_of 0..1 SlotDefinition None slot_conditions 0..* SlotDefinition SlotDefinition slot_definition\u279eapply_to 0..* SlotDefinition SlotDefinition slot_definition\u279edisjoint_with 0..* SlotDefinition SlotDefinition slot_definition\u279eis_a 0..1 SlotDefinition SlotDefinition slot_definition\u279emixins 0..* SlotDefinition SchemaDefinition schema_definition\u279eslots 0..* SlotDefinition SlotDefinition slot_group 0..1 SlotDefinition ClassDefinition slot_usage 0..* SlotDefinition ClassDefinition slots 0..* SlotDefinition SlotDefinition subproperty_of 0..1 SlotDefinition None transitive_form_of 0..1 SlotDefinition None traverse 0..1 SlotDefinition UniqueKey unique_key_slots 1..* SlotDefinition Attributes Own singular_name 0..1 Description: a name that is used in the singular form Range: String domain 0..1 Description: defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 * Range: [ClassDefinition](ClassDefinition.md) slot_uri 0..1 Description: predicate of this slot for semantic web application Range: Uriorcurie multivalued 0..1 Description: true means that slot can have more than one value Range: Boolean inherited 0..1 Description: true means that the value of a slot is inherited by subclasses Range: Boolean readonly 0..1 Description: If present, slot is read only. Text explains why Range: String ifabsent 0..1 Description: function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: [Tt]rue -- boolean True [Ff]alse -- boolean False int(value) -- integer value str(value) -- string value default_range -- schema default range bnode -- blank node identifier slot_uri -- URI for the slot class_curie -- CURIE for the containing class class_uri -- URI for the containing class Range: String inlined 0..1 Description: True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. Range: Boolean inlined_as_list 0..1 Description: True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. Range: Boolean key 0..1 Description: True means that the key slot(s) uniquely identify the container. Range: Boolean identifier 0..1 Description: True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container Range: Boolean designates_type 0..1 Description: True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition Range: Boolean alias 0..1 Description: the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. Range: String owner 0..1 Description: the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot Range: Definition domain_of 0..* Description: the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context Range: ClassDefinition subproperty_of 0..1 Description: Ontology property which this slot is a subproperty of Range: SlotDefinition symmetric 0..1 Description: If s is symmetric, and i.s=v, then v.s=i Range: Boolean reflexive 0..1 Description: If s is reflexive, then i.s=i for all instances i Range: Boolean locally_reflexive 0..1 Description: If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i Range: Boolean irreflexive 0..1 Description: If s is irreflexive, then there exists no i such i.s=i Range: Boolean asymmetric 0..1 Description: If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i Range: Boolean transitive 0..1 Description: If s is transitive, and i.s=z, and s.s=j, then i.s=j Range: Boolean inverse 0..1 Description: indicates that any instance of d s r implies that there is also an instance of r s' d Range: SlotDefinition is_class_field 0..1 Description: indicates that any instance, i, the domain of this slot will include an assert of i s range Range: Boolean transitive_form_of 0..1 Description: If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive Range: SlotDefinition reflexive_transitive_form_of 0..1 Description: transitive_form_of including the reflexive case Range: SlotDefinition role 0..1 Description: the role played by the slot range Range: String is_usage_slot 0..1 Description: True means that this slot was defined in a slot_usage situation Range: Boolean usage_slot_name 0..1 Description: The name of the slot referenced in the slot_usage Range: String relational_role 0..1 Description: the role a slot on a relationship class plays, for example, the subject, object or predicate roles Range: relational_role_enum slot_group 0..1 Description: allows for grouping of related slots into a grouping slot that serves the role of a group Range: SlotDefinition is_grouping_slot 0..1 Description: true if this slot is a grouping slot Range: Boolean path_rule 0..1 Description: a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts Range: PathExpression slot_definition\u279edisjoint_with 0..* Description: Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances Range: SlotDefinition children_are_mutually_disjoint 0..1 Description: If true then all direct is_a children are mutually disjoint and share no instances in common Range: Boolean slot_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: SlotDefinition slot_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: SlotDefinition slot_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: SlotDefinition Inherited from definition: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String Mixed in from slot_expression: range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) Mixed in from slot_expression: range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression Mixed in from slot_expression: required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean Mixed in from slot_expression: recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean Mixed in from slot_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from slot_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from slot_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from slot_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from slot_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from slot_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from slot_expression: equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String Mixed in from slot_expression: minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer Mixed in from slot_expression: has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression Mixed in from slot_expression: all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) Mixed in from slot_expression: slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression Mixed in from slot_expression: slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression Other properties Aliases: slot field property attribute column variable Close Mappings: rdf:Property","title":"Class: slot_definition"},{"location":"SlotDefinition/#class-slot_definition","text":"the definition of a property or a slot URI: linkml:SlotDefinition","title":"Class: slot_definition"},{"location":"SlotDefinition/#parents","text":"is_a: Definition - base class for definitions","title":"Parents"},{"location":"SlotDefinition/#uses-mixin","text":"mixin: SlotExpression - an expression that constrains the range of values a slot can take","title":"Uses Mixin"},{"location":"SlotDefinition/#referenced-by-class","text":"None all_members 0..* SlotDefinition ClassDefinition attributes 0..* SlotDefinition ClassDefinition defining_slots 0..* SlotDefinition SlotDefinition inverse 0..1 SlotDefinition None reflexive_transitive_form_of 0..1 SlotDefinition None slot_conditions 0..* SlotDefinition SlotDefinition slot_definition\u279eapply_to 0..* SlotDefinition SlotDefinition slot_definition\u279edisjoint_with 0..* SlotDefinition SlotDefinition slot_definition\u279eis_a 0..1 SlotDefinition SlotDefinition slot_definition\u279emixins 0..* SlotDefinition SchemaDefinition schema_definition\u279eslots 0..* SlotDefinition SlotDefinition slot_group 0..1 SlotDefinition ClassDefinition slot_usage 0..* SlotDefinition ClassDefinition slots 0..* SlotDefinition SlotDefinition subproperty_of 0..1 SlotDefinition None transitive_form_of 0..1 SlotDefinition None traverse 0..1 SlotDefinition UniqueKey unique_key_slots 1..* SlotDefinition","title":"Referenced by Class"},{"location":"SlotDefinition/#attributes","text":"","title":"Attributes"},{"location":"SlotDefinition/#own","text":"singular_name 0..1 Description: a name that is used in the singular form Range: String domain 0..1 Description: defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 * Range: [ClassDefinition](ClassDefinition.md) slot_uri 0..1 Description: predicate of this slot for semantic web application Range: Uriorcurie multivalued 0..1 Description: true means that slot can have more than one value Range: Boolean inherited 0..1 Description: true means that the value of a slot is inherited by subclasses Range: Boolean readonly 0..1 Description: If present, slot is read only. Text explains why Range: String ifabsent 0..1 Description: function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: [Tt]rue -- boolean True [Ff]alse -- boolean False int(value) -- integer value str(value) -- string value default_range -- schema default range bnode -- blank node identifier slot_uri -- URI for the slot class_curie -- CURIE for the containing class class_uri -- URI for the containing class Range: String inlined 0..1 Description: True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. Range: Boolean inlined_as_list 0..1 Description: True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. Range: Boolean key 0..1 Description: True means that the key slot(s) uniquely identify the container. Range: Boolean identifier 0..1 Description: True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container Range: Boolean designates_type 0..1 Description: True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition Range: Boolean alias 0..1 Description: the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. Range: String owner 0..1 Description: the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot Range: Definition domain_of 0..* Description: the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context Range: ClassDefinition subproperty_of 0..1 Description: Ontology property which this slot is a subproperty of Range: SlotDefinition symmetric 0..1 Description: If s is symmetric, and i.s=v, then v.s=i Range: Boolean reflexive 0..1 Description: If s is reflexive, then i.s=i for all instances i Range: Boolean locally_reflexive 0..1 Description: If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i Range: Boolean irreflexive 0..1 Description: If s is irreflexive, then there exists no i such i.s=i Range: Boolean asymmetric 0..1 Description: If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i Range: Boolean transitive 0..1 Description: If s is transitive, and i.s=z, and s.s=j, then i.s=j Range: Boolean inverse 0..1 Description: indicates that any instance of d s r implies that there is also an instance of r s' d Range: SlotDefinition is_class_field 0..1 Description: indicates that any instance, i, the domain of this slot will include an assert of i s range Range: Boolean transitive_form_of 0..1 Description: If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive Range: SlotDefinition reflexive_transitive_form_of 0..1 Description: transitive_form_of including the reflexive case Range: SlotDefinition role 0..1 Description: the role played by the slot range Range: String is_usage_slot 0..1 Description: True means that this slot was defined in a slot_usage situation Range: Boolean usage_slot_name 0..1 Description: The name of the slot referenced in the slot_usage Range: String relational_role 0..1 Description: the role a slot on a relationship class plays, for example, the subject, object or predicate roles Range: relational_role_enum slot_group 0..1 Description: allows for grouping of related slots into a grouping slot that serves the role of a group Range: SlotDefinition is_grouping_slot 0..1 Description: true if this slot is a grouping slot Range: Boolean path_rule 0..1 Description: a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts Range: PathExpression slot_definition\u279edisjoint_with 0..* Description: Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances Range: SlotDefinition children_are_mutually_disjoint 0..1 Description: If true then all direct is_a children are mutually disjoint and share no instances in common Range: Boolean slot_definition\u279eis_a 0..1 Description: specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded Range: SlotDefinition slot_definition\u279emixins 0..* Description: List of definitions to be mixed in. Targets may be any definition of the same type Range: SlotDefinition slot_definition\u279eapply_to 0..* Description: Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. Range: SlotDefinition","title":"Own"},{"location":"SlotDefinition/#inherited-from-definition","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer abstract 0..1 Description: an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. Range: Boolean mixin 0..1 Description: this slot or class can only be used as a mixin. Range: Boolean values_from 0..* Description: the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot Range: Uriorcurie created_by 0..1 Description: agent that created the element Range: Uriorcurie created_on 0..1 Description: time at which the element was created Range: Datetime last_updated_on 0..1 Description: time at which the element was last updated Range: Datetime modified_by 0..1 Description: agent that modified the element Range: Uriorcurie status 0..1 Description: status of the element Range: Uriorcurie Example: bibo:draft None string_serialization 0..1 Description: Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm Range: String","title":"Inherited from definition:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression","text":"range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md)","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_1","text":"range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_2","text":"required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_3","text":"recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_6","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_7","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_8","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_9","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_10","text":"equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_11","text":"minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_12","text":"maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_13","text":"has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_14","text":"all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md)","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_15","text":"slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_16","text":"slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_17","text":"slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#mixed-in-from-slot_expression_18","text":"slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Mixed in from slot_expression:"},{"location":"SlotDefinition/#other-properties","text":"Aliases: slot field property attribute column variable Close Mappings: rdf:Property","title":"Other properties"},{"location":"SlotExpression/","text":"Class: slot_expression an expression that constrains the range of values a slot can take URI: linkml:SlotExpression Parents is_a: Expression - general mixin for any class that can represent some form of expression Mixin for AnonymousSlotExpression (mixin) SlotDefinition (mixin) - the definition of a property or a slot Referenced by Class Attributes Own range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Class: slot_expression"},{"location":"SlotExpression/#class-slot_expression","text":"an expression that constrains the range of values a slot can take URI: linkml:SlotExpression","title":"Class: slot_expression"},{"location":"SlotExpression/#parents","text":"is_a: Expression - general mixin for any class that can represent some form of expression","title":"Parents"},{"location":"SlotExpression/#mixin-for","text":"AnonymousSlotExpression (mixin) SlotDefinition (mixin) - the definition of a property or a slot","title":"Mixin for"},{"location":"SlotExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"SlotExpression/#attributes","text":"","title":"Attributes"},{"location":"SlotExpression/#own","text":"range 0..1 Description: defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 * Range: [Element](Element.md) range_expression 0..1 Description: A range that is described as a boolean expression combining existing ranges Range: AnonymousClassExpression required 0..1 Description: true means that the slot must be present in the loaded definition Range: Boolean recommended 0..1 Description: true means that the slot should be present in the loaded definition, but this is not required Range: Boolean minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer equals_expression 0..1 Description: the value of the slot must equal the value of the evaluated expression Range: String minimum_cardinality 0..1 Description: the minimum number of entries for a multivalued slot Range: Integer maximum_cardinality 0..1 Description: the maximum number of entries for a multivalued slot Range: Integer has_member 0..1 Description: the values of the slot is multivalued with at least one member satisfying the condition Range: AnonymousSlotExpression all_members 0..* Description: the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 * Range: [SlotDefinition](SlotDefinition.md) slot_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousSlotExpression slot_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousSlotExpression","title":"Own"},{"location":"String/","text":"Type: string A character string URI: linkml:String Root (builtin) type str","title":"Type: string"},{"location":"String/#type-string","text":"A character string URI: linkml:String Root (builtin) type str","title":"Type: string"},{"location":"SubsetDefinition/","text":"Class: subset_definition the name and description of a subset URI: linkml:SubsetDefinition Parents is_a: Element - a named element in the model Referenced by Class Element in_subset 0..* SubsetDefinition SchemaDefinition subsets 0..* SubsetDefinition Attributes Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Class: subset_definition"},{"location":"SubsetDefinition/#class-subset_definition","text":"the name and description of a subset URI: linkml:SubsetDefinition","title":"Class: subset_definition"},{"location":"SubsetDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"SubsetDefinition/#referenced-by-class","text":"Element in_subset 0..* SubsetDefinition SchemaDefinition subsets 0..* SubsetDefinition","title":"Referenced by Class"},{"location":"SubsetDefinition/#attributes","text":"","title":"Attributes"},{"location":"SubsetDefinition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"Time/","text":"Type: time A time object represents a (local) time of day, independent of any particular day URI: linkml:Time Root (builtin) type XSDTime Representation str","title":"Type: time"},{"location":"Time/#type-time","text":"A time object represents a (local) time of day, independent of any particular day URI: linkml:Time Root (builtin) type XSDTime Representation str","title":"Type: time"},{"location":"TypeDefinition/","text":"Class: type_definition A data type definition. URI: linkml:TypeDefinition Parents is_a: Element - a named element in the model Uses Mixin mixin: TypeExpression Referenced by Class SchemaDefinition default_range 0..1 TypeDefinition TypeDefinition typeof 0..1 TypeDefinition SchemaDefinition types 0..* TypeDefinition Attributes Own typeof 0..1 Description: Names a parent type Range: TypeDefinition base 0..1 Description: python base type that implements this type definition Range: String type_definition\u279euri 0..1 Description: The uri that defines the possible values for the type definition Range: Uriorcurie repr 0..1 Description: the name of the python object that implements this type definition Range: String Inherited from element: name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer Mixed in from type_expression: pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String Mixed in from type_expression: equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String Mixed in from type_expression: equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String Mixed in from type_expression: equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer Mixed in from type_expression: minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer Mixed in from type_expression: maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer Mixed in from type_expression: type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression Mixed in from type_expression: type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Class: type_definition"},{"location":"TypeDefinition/#class-type_definition","text":"A data type definition. URI: linkml:TypeDefinition","title":"Class: type_definition"},{"location":"TypeDefinition/#parents","text":"is_a: Element - a named element in the model","title":"Parents"},{"location":"TypeDefinition/#uses-mixin","text":"mixin: TypeExpression","title":"Uses Mixin"},{"location":"TypeDefinition/#referenced-by-class","text":"SchemaDefinition default_range 0..1 TypeDefinition TypeDefinition typeof 0..1 TypeDefinition SchemaDefinition types 0..* TypeDefinition","title":"Referenced by Class"},{"location":"TypeDefinition/#attributes","text":"","title":"Attributes"},{"location":"TypeDefinition/#own","text":"typeof 0..1 Description: Names a parent type Range: TypeDefinition base 0..1 Description: python base type that implements this type definition Range: String type_definition\u279euri 0..1 Description: The uri that defines the possible values for the type definition Range: Uriorcurie repr 0..1 Description: the name of the python object that implements this type definition Range: String","title":"Own"},{"location":"TypeDefinition/#inherited-from-element","text":"name 1..1 Description: the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. Range: String in subsets: (owl) id_prefixes 0..* Description: the identifier of this class or slot must begin with the URIs referenced by this prefix Range: Ncname definition_uri 0..1 Description: the \"native\" URI of the element Range: Uriorcurie aliases 0..* Range: String local_names 0..* Range: LocalName conforms_to 0..1 Description: An established standard to which the element conforms. Range: String mappings 0..* Description: A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. Range: Uriorcurie exact mappings 0..* Description: A list of terms from different schemas or terminology systems that have identical meaning. Range: Uriorcurie close mappings 0..* Description: A list of terms from different schemas or terminology systems that have close meaning. Range: Uriorcurie related mappings 0..* Description: A list of terms from different schemas or terminology systems that have related meaning. Range: Uriorcurie narrow mappings 0..* Description: A list of terms from different schemas or terminology systems that have narrower meaning. Range: Uriorcurie broad mappings 0..* Description: A list of terms from different schemas or terminology systems that have broader meaning. Range: Uriorcurie precedence 0..1 Description: the relative order in which the element occurs Range: Integer","title":"Inherited from element:"},{"location":"TypeDefinition/#mixed-in-from-type_expression","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_1","text":"equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_2","text":"equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_3","text":"equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_4","text":"minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_5","text":"maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_6","text":"type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_7","text":"type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_8","text":"type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeDefinition/#mixed-in-from-type_expression_9","text":"type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Mixed in from type_expression:"},{"location":"TypeExpression/","text":"Class: type_expression URI: linkml:TypeExpression Parents is_a: Expression - general mixin for any class that can represent some form of expression Mixin for AnonymousTypeExpression (mixin) TypeDefinition (mixin) - A data type definition. Referenced by Class Attributes Own pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Class: type_expression"},{"location":"TypeExpression/#class-type_expression","text":"URI: linkml:TypeExpression","title":"Class: type_expression"},{"location":"TypeExpression/#parents","text":"is_a: Expression - general mixin for any class that can represent some form of expression","title":"Parents"},{"location":"TypeExpression/#mixin-for","text":"AnonymousTypeExpression (mixin) TypeDefinition (mixin) - A data type definition.","title":"Mixin for"},{"location":"TypeExpression/#referenced-by-class","text":"","title":"Referenced by Class"},{"location":"TypeExpression/#attributes","text":"","title":"Attributes"},{"location":"TypeExpression/#own","text":"pattern 0..1 Description: the string value of the slot must conform to this regular expression Range: String equals_string 0..1 Description: the slot must have range string and the value of the slot must equal the specified value Range: String equals_string_in 0..* Description: the slot must have range string and the value of the slot must equal one of the specified values Range: String equals_number 0..1 Description: the slot must have range of a number and the value of the slot must equal the specified value Range: Integer minimum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or higher than this Range: Integer maximum_value 0..1 Description: for slots with ranges of type number, the value must be equal to or lowe than this Range: Integer type_expression\u279enone_of 0..* Description: holds if none of the expressions hold Range: AnonymousTypeExpression type_expression\u279eexactly_one_of 0..* Description: holds if only one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eany_of 0..* Description: holds if at least one of the expressions hold Range: AnonymousTypeExpression type_expression\u279eall_of 0..* Description: holds if all of the expressions hold Range: AnonymousTypeExpression","title":"Own"},{"location":"UniqueKey/","text":"Class: unique_key a collection of slots whose values uniquely identify an instance of a class URI: linkml:UniqueKey Uses Mixin mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions Referenced by Class ClassDefinition unique_keys 0..* UniqueKey Attributes Own unique_key_name 1..1 Description: name of the unique key Range: String unique_key_slots 1..* Description: list of slot names that form a key Range: SlotDefinition Mixed in from extensible: extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension Mixed in from annotatable: annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation Mixed in from common_metadata: description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl) Mixed in from common_metadata: alt_descriptions 0..* Range: AltDescription Mixed in from common_metadata: title 0..1 Description: the official title of the element Range: String in subsets: (owl) Mixed in from common_metadata: deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String Mixed in from common_metadata: todos 0..* Description: Outstanding issue that needs resolution Range: String Mixed in from common_metadata: notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl) Mixed in from common_metadata: comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl) Mixed in from common_metadata: examples 0..* Description: example usages of an element Range: Example in subsets: (owl) Mixed in from common_metadata: in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition Mixed in from common_metadata: from_schema 0..1 Description: id of the schema that defined the element Range: Uri Mixed in from common_metadata: imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String Mixed in from common_metadata: source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie Mixed in from common_metadata: see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl) Mixed in from common_metadata: deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie Mixed in from common_metadata: deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Class: unique_key"},{"location":"UniqueKey/#class-unique_key","text":"a collection of slots whose values uniquely identify an instance of a class URI: linkml:UniqueKey","title":"Class: unique_key"},{"location":"UniqueKey/#uses-mixin","text":"mixin: Extensible - mixin for classes that support extension mixin: Annotatable - mixin for classes that support annotations mixin: CommonMetadata - Generic metadata shared across definitions","title":"Uses Mixin"},{"location":"UniqueKey/#referenced-by-class","text":"ClassDefinition unique_keys 0..* UniqueKey","title":"Referenced by Class"},{"location":"UniqueKey/#attributes","text":"","title":"Attributes"},{"location":"UniqueKey/#own","text":"unique_key_name 1..1 Description: name of the unique key Range: String unique_key_slots 1..* Description: list of slot names that form a key Range: SlotDefinition","title":"Own"},{"location":"UniqueKey/#mixed-in-from-extensible","text":"extensions 0..* Description: a tag/text tuple attached to an arbitrary element Range: Extension","title":"Mixed in from extensible:"},{"location":"UniqueKey/#mixed-in-from-annotatable","text":"annotations 0..* Description: a collection of tag/text tuples with the semantics of OWL Annotation Range: Annotation","title":"Mixed in from annotatable:"},{"location":"UniqueKey/#mixed-in-from-common_metadata","text":"description 0..1 Description: a description of the element's purpose and use Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_1","text":"alt_descriptions 0..* Range: AltDescription","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_2","text":"title 0..1 Description: the official title of the element Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_3","text":"deprecated 0..1 Description: Description of why and when this element will no longer be used Range: String","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_4","text":"todos 0..* Description: Outstanding issue that needs resolution Range: String","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_5","text":"notes 0..* Description: editorial notes about an element intended for internal consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_6","text":"comments 0..* Description: notes and comments about an element intended for external consumption Range: String in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_7","text":"examples 0..* Description: example usages of an element Range: Example in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_8","text":"in_subset 0..* Description: used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) Range: SubsetDefinition","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_9","text":"from_schema 0..1 Description: id of the schema that defined the element Range: Uri","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_10","text":"imported_from 0..1 Description: the imports entry that this element was derived from. Empty means primary source Range: String","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_11","text":"source 0..1 Description: A related resource from which the element is derived. Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_12","text":"see_also 0..* Description: a reference Range: Uriorcurie in subsets: (owl)","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_13","text":"deprecated element has exact replacement 0..1 Description: When an element is deprecated, it can be automatically replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"UniqueKey/#mixed-in-from-common_metadata_14","text":"deprecated element has possible replacement 0..1 Description: When an element is deprecated, it can be potentially replaced by this uri or curie Range: Uriorcurie","title":"Mixed in from common_metadata:"},{"location":"Uri/","text":"Type: uri a complete URI URI: linkml:Uri Root (builtin) type URI Representation str","title":"Type: uri"},{"location":"Uri/#type-uri","text":"a complete URI URI: linkml:Uri Root (builtin) type URI Representation str","title":"Type: uri"},{"location":"Uriorcurie/","text":"Type: uriorcurie a URI or a CURIE URI: linkml:Uriorcurie Root (builtin) type URIorCURIE Representation str","title":"Type: uriorcurie"},{"location":"Uriorcurie/#type-uriorcurie","text":"a URI or a CURIE URI: linkml:Uriorcurie Root (builtin) type URIorCURIE Representation str","title":"Type: uriorcurie"},{"location":"abstract/","text":"Slot: abstract an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. URI: linkml:abstract Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition Definition SlotDefinition","title":"Slot: abstract"},{"location":"abstract/#slot-abstract","text":"an abstract class is a high level class or slot that is typically used to group common slots together and cannot be directly instantiated. URI: linkml:abstract","title":"Slot: abstract"},{"location":"abstract/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"abstract/#parents","text":"","title":"Parents"},{"location":"abstract/#children","text":"","title":"Children"},{"location":"abstract/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"alias/","text":"Slot: alias the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. URI: linkml:alias Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition Other properties Mappings: skos:prefLabel","title":"Slot: alias"},{"location":"alias/#slot-alias","text":"the name used for a slot in the context of its owning class. If present, this is used instead of the actual slot name. URI: linkml:alias","title":"Slot: alias"},{"location":"alias/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"alias/#parents","text":"","title":"Parents"},{"location":"alias/#children","text":"","title":"Children"},{"location":"alias/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"alias/#other-properties","text":"Mappings: skos:prefLabel","title":"Other properties"},{"location":"aliases/","text":"Slot: aliases URI: linkml:aliases Domain and Range Element \u2192 0..* String Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Aliases: synonyms alternate names alternative labels designations Mappings: skos:altLabel","title":"Slot: aliases"},{"location":"aliases/#slot-aliases","text":"URI: linkml:aliases","title":"Slot: aliases"},{"location":"aliases/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"aliases/#parents","text":"","title":"Parents"},{"location":"aliases/#children","text":"","title":"Children"},{"location":"aliases/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"aliases/#other-properties","text":"Aliases: synonyms alternate names alternative labels designations Mappings: skos:altLabel","title":"Other properties"},{"location":"all_members/","text":"Slot: all_members the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 URI: linkml:all_members Domain and Range None \u2192 0..* SlotDefinition Parents is_a: list_value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: all_members"},{"location":"all_members/#slot-all_members","text":"the value of the multiavlued slot is a list where all elements conform to the specified values. this defines a dynamic class with named slots according to matching constraints E.g to state that all members of a list are between 1 and 10 all_members: x: range: integer minimum_value: 10 maximum_value: 10 URI: linkml:all_members","title":"Slot: all_members"},{"location":"all_members/#domain-and-range","text":"None \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"all_members/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"all_members/#children","text":"","title":"Children"},{"location":"all_members/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:all_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of Used by Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:all_of","title":"Slot: all_of"},{"location":"all_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"all_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"all_of/#children","text":"class_expression\u279eall_of path_expression\u279eall_of slot_expression\u279eall_of type_expression\u279eall_of","title":"Children"},{"location":"all_of/#used-by","text":"","title":"Used by"},{"location":"all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"alt_description_source/","text":"Slot: source the source of an attributed description URI: linkml:alt_description_source Domain and Range AltDescription \u2192 1..1 String Parents Children Used by AltDescription","title":"Slot: source"},{"location":"alt_description_source/#slot-source","text":"the source of an attributed description URI: linkml:alt_description_source","title":"Slot: source"},{"location":"alt_description_source/#domain-and-range","text":"AltDescription \u2192 1..1 String","title":"Domain and Range"},{"location":"alt_description_source/#parents","text":"","title":"Parents"},{"location":"alt_description_source/#children","text":"","title":"Children"},{"location":"alt_description_source/#used-by","text":"AltDescription","title":"Used by"},{"location":"alt_description_text/","text":"Slot: description text of an attributed description URI: linkml:alt_description_text Domain and Range AltDescription \u2192 1..1 String Parents Children Used by AltDescription","title":"Slot: description"},{"location":"alt_description_text/#slot-description","text":"text of an attributed description URI: linkml:alt_description_text","title":"Slot: description"},{"location":"alt_description_text/#domain-and-range","text":"AltDescription \u2192 1..1 String","title":"Domain and Range"},{"location":"alt_description_text/#parents","text":"","title":"Parents"},{"location":"alt_description_text/#children","text":"","title":"Children"},{"location":"alt_description_text/#used-by","text":"AltDescription","title":"Used by"},{"location":"alt_descriptions/","text":"Slot: alt_descriptions URI: linkml:alt_descriptions Domain and Range Element \u2192 0..* AltDescription Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Aliases: alternate definitions","title":"Slot: alt_descriptions"},{"location":"alt_descriptions/#slot-alt_descriptions","text":"URI: linkml:alt_descriptions","title":"Slot: alt_descriptions"},{"location":"alt_descriptions/#domain-and-range","text":"Element \u2192 0..* AltDescription","title":"Domain and Range"},{"location":"alt_descriptions/#parents","text":"","title":"Parents"},{"location":"alt_descriptions/#children","text":"","title":"Children"},{"location":"alt_descriptions/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"alt_descriptions/#other-properties","text":"Aliases: alternate definitions","title":"Other properties"},{"location":"annotations/","text":"Slot: annotations a collection of tag/text tuples with the semantics of OWL Annotation URI: linkml:annotations Domain and Range Annotatable \u2192 0..* Annotation Parents is_a: extensions Children Used by Annotatable Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: annotations"},{"location":"annotations/#slot-annotations","text":"a collection of tag/text tuples with the semantics of OWL Annotation URI: linkml:annotations","title":"Slot: annotations"},{"location":"annotations/#domain-and-range","text":"Annotatable \u2192 0..* Annotation","title":"Domain and Range"},{"location":"annotations/#parents","text":"is_a: extensions","title":"Parents"},{"location":"annotations/#children","text":"","title":"Children"},{"location":"annotations/#used-by","text":"Annotatable Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:any_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of Used by Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:any_of","title":"Slot: any_of"},{"location":"any_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"any_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"any_of/#children","text":"class_expression\u279eany_of path_expression\u279eany_of slot_expression\u279eany_of type_expression\u279eany_of","title":"Children"},{"location":"any_of/#used-by","text":"","title":"Used by"},{"location":"any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"apply_to/","text":"Slot: apply_to Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:apply_to Domain and Range Definition \u2192 0..* Definition Parents Children class_definition\u279eapply_to slot_definition\u279eapply_to Used by Definition","title":"Slot: apply_to"},{"location":"apply_to/#slot-apply_to","text":"Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:apply_to","title":"Slot: apply_to"},{"location":"apply_to/#domain-and-range","text":"Definition \u2192 0..* Definition","title":"Domain and Range"},{"location":"apply_to/#parents","text":"","title":"Parents"},{"location":"apply_to/#children","text":"class_definition\u279eapply_to slot_definition\u279eapply_to","title":"Children"},{"location":"apply_to/#used-by","text":"Definition","title":"Used by"},{"location":"asymmetric/","text":"Slot: asymmetric If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i URI: linkml:asymmetric Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Comments: asymmetry is the combination of antisymmetry and irreflexivity Close Mappings: owl:AsymmetricProperty","title":"Slot: asymmetric"},{"location":"asymmetric/#slot-asymmetric","text":"If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i URI: linkml:asymmetric","title":"Slot: asymmetric"},{"location":"asymmetric/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"asymmetric/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"asymmetric/#children","text":"","title":"Children"},{"location":"asymmetric/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"asymmetric/#other-properties","text":"Comments: asymmetry is the combination of antisymmetry and irreflexivity Close Mappings: owl:AsymmetricProperty","title":"Other properties"},{"location":"attributes/","text":"Slot: attributes Inline definition of slots URI: linkml:attributes Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition Other properties Comments: attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.","title":"Slot: attributes"},{"location":"attributes/#slot-attributes","text":"Inline definition of slots URI: linkml:attributes","title":"Slot: attributes"},{"location":"attributes/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"attributes/#parents","text":"","title":"Parents"},{"location":"attributes/#children","text":"","title":"Children"},{"location":"attributes/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"attributes/#other-properties","text":"Comments: attributes are an alternative way of defining new slots. An attribute adds a slot to the global space in the form __ (lower case, double underscores). Attributes can be specialized via slot_usage.","title":"Other properties"},{"location":"base/","text":"Slot: base python base type that implements this type definition URI: linkml:base Domain and Range TypeDefinition \u2192 0..1 String Parents Children Used by TypeDefinition Other properties Comments: every root type must have a base the base is inherited by child types but may be overriden. Base compatibility is not checked.","title":"Slot: base"},{"location":"base/#slot-base","text":"python base type that implements this type definition URI: linkml:base","title":"Slot: base"},{"location":"base/#domain-and-range","text":"TypeDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"base/#parents","text":"","title":"Parents"},{"location":"base/#children","text":"","title":"Children"},{"location":"base/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"base/#other-properties","text":"Comments: every root type must have a base the base is inherited by child types but may be overriden. Base compatibility is not checked.","title":"Other properties"},{"location":"bidirectional/","text":"Slot: bidirectional in addition to preconditions entailing postconditions, the postconditions entail the preconditions URI: linkml:bidirectional Domain and Range None \u2192 0..1 Boolean Parents Children Used by ClassRule Other properties Aliases: iff if and only if","title":"Slot: bidirectional"},{"location":"bidirectional/#slot-bidirectional","text":"in addition to preconditions entailing postconditions, the postconditions entail the preconditions URI: linkml:bidirectional","title":"Slot: bidirectional"},{"location":"bidirectional/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"bidirectional/#parents","text":"","title":"Parents"},{"location":"bidirectional/#children","text":"","title":"Children"},{"location":"bidirectional/#used-by","text":"ClassRule","title":"Used by"},{"location":"bidirectional/#other-properties","text":"Aliases: iff if and only if","title":"Other properties"},{"location":"boolean_slot/","text":"Slot: boolean_slot A grouping of slots that expression a boolean operator over a list of operands URI: linkml:boolean_slot Domain and Range None \u2192 0..* Expression Parents Children all_of any_of exactly_one_of none_of Used by","title":"Slot: boolean_slot"},{"location":"boolean_slot/#slot-boolean_slot","text":"A grouping of slots that expression a boolean operator over a list of operands URI: linkml:boolean_slot","title":"Slot: boolean_slot"},{"location":"boolean_slot/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"boolean_slot/#parents","text":"","title":"Parents"},{"location":"boolean_slot/#children","text":"all_of any_of exactly_one_of none_of","title":"Children"},{"location":"boolean_slot/#used-by","text":"","title":"Used by"},{"location":"broad_mappings/","text":"Slot: broad mappings A list of terms from different schemas or terminology systems that have broader meaning. URI: linkml:broad_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:broadMatch","title":"Slot: broad mappings"},{"location":"broad_mappings/#slot-broad-mappings","text":"A list of terms from different schemas or terminology systems that have broader meaning. URI: linkml:broad_mappings","title":"Slot: broad mappings"},{"location":"broad_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"broad_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"broad_mappings/#children","text":"","title":"Children"},{"location":"broad_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"broad_mappings/#other-properties","text":"Mappings: skos:broadMatch","title":"Other properties"},{"location":"children_are_mutually_disjoint/","text":"Slot: children_are_mutually_disjoint If true then all direct is_a children are mutually disjoint and share no instances in common URI: linkml:children_are_mutually_disjoint Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition SlotDefinition","title":"Slot: children_are_mutually_disjoint"},{"location":"children_are_mutually_disjoint/#slot-children_are_mutually_disjoint","text":"If true then all direct is_a children are mutually disjoint and share no instances in common URI: linkml:children_are_mutually_disjoint","title":"Slot: children_are_mutually_disjoint"},{"location":"children_are_mutually_disjoint/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"children_are_mutually_disjoint/#parents","text":"","title":"Parents"},{"location":"children_are_mutually_disjoint/#children","text":"","title":"Children"},{"location":"children_are_mutually_disjoint/#used-by","text":"ClassDefinition SlotDefinition","title":"Used by"},{"location":"class_definition_apply_to/","text":"Slot: apply_to Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:class_definition_apply_to Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents is_a: apply_to Children Used by ClassDefinition","title":"Slot: apply_to"},{"location":"class_definition_apply_to/#slot-apply_to","text":"Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:class_definition_apply_to","title":"Slot: apply_to"},{"location":"class_definition_apply_to/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"class_definition_apply_to/#parents","text":"is_a: apply_to","title":"Parents"},{"location":"class_definition_apply_to/#children","text":"","title":"Children"},{"location":"class_definition_apply_to/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_disjoint_with/","text":"Slot: disjoint_with Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances URI: linkml:class_definition_disjoint_with Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents is_a: disjoint_with Children Used by ClassDefinition","title":"Slot: disjoint_with"},{"location":"class_definition_disjoint_with/#slot-disjoint_with","text":"Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances URI: linkml:class_definition_disjoint_with","title":"Slot: disjoint_with"},{"location":"class_definition_disjoint_with/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"class_definition_disjoint_with/#parents","text":"is_a: disjoint_with","title":"Parents"},{"location":"class_definition_disjoint_with/#children","text":"","title":"Children"},{"location":"class_definition_disjoint_with/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:class_definition_is_a Domain and Range ClassDefinition \u2192 0..1 ClassDefinition Parents is_a: is_a Children Used by ClassDefinition","title":"Slot: is_a"},{"location":"class_definition_is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:class_definition_is_a","title":"Slot: is_a"},{"location":"class_definition_is_a/#domain-and-range","text":"ClassDefinition \u2192 0..1 ClassDefinition","title":"Domain and Range"},{"location":"class_definition_is_a/#parents","text":"is_a: is_a","title":"Parents"},{"location":"class_definition_is_a/#children","text":"","title":"Children"},{"location":"class_definition_is_a/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:class_definition_mixins Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents is_a: mixins Children Used by ClassDefinition Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"class_definition_mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:class_definition_mixins","title":"Slot: mixins"},{"location":"class_definition_mixins/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"class_definition_mixins/#parents","text":"is_a: mixins","title":"Parents"},{"location":"class_definition_mixins/#children","text":"","title":"Children"},{"location":"class_definition_mixins/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"class_definition_rules/","text":"Slot: rules the collection of rules that apply to all members of this class URI: linkml:class_definition_rules Domain and Range ClassDefinition \u2192 0..* ClassRule Parents is_a: rules Children Used by ClassDefinition Other properties Mappings: sh:rule","title":"Slot: rules"},{"location":"class_definition_rules/#slot-rules","text":"the collection of rules that apply to all members of this class URI: linkml:class_definition_rules","title":"Slot: rules"},{"location":"class_definition_rules/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassRule","title":"Domain and Range"},{"location":"class_definition_rules/#parents","text":"is_a: rules","title":"Parents"},{"location":"class_definition_rules/#children","text":"","title":"Children"},{"location":"class_definition_rules/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_definition_rules/#other-properties","text":"Mappings: sh:rule","title":"Other properties"},{"location":"class_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:class_expression_all_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: all_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"class_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:class_expression_all_of","title":"Slot: all_of"},{"location":"class_expression_all_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"class_expression_all_of/#children","text":"","title":"Children"},{"location":"class_expression_all_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"class_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:class_expression_any_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: any_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"class_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:class_expression_any_of","title":"Slot: any_of"},{"location":"class_expression_any_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"class_expression_any_of/#children","text":"","title":"Children"},{"location":"class_expression_any_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"class_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:class_expression_exactly_one_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: exactly_one_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"class_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:class_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"class_expression_exactly_one_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"class_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"class_expression_exactly_one_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"class_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:class_expression_none_of Domain and Range ClassExpression \u2192 0..* AnonymousClassExpression Parents is_a: none_of Children Used by AnonymousClassExpression ClassDefinition ClassExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"class_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:class_expression_none_of","title":"Slot: none_of"},{"location":"class_expression_none_of/#domain-and-range","text":"ClassExpression \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"class_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"class_expression_none_of/#children","text":"","title":"Children"},{"location":"class_expression_none_of/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"class_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"class_uri/","text":"Slot: class_uri URI of the class in an RDF environment URI: linkml:class_uri Domain and Range ClassDefinition \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Other properties Aliases: public ID","title":"Slot: class_uri"},{"location":"class_uri/#slot-class_uri","text":"URI of the class in an RDF environment URI: linkml:class_uri","title":"Slot: class_uri"},{"location":"class_uri/#domain-and-range","text":"ClassDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"class_uri/#parents","text":"","title":"Parents"},{"location":"class_uri/#children","text":"","title":"Children"},{"location":"class_uri/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"class_uri/#other-properties","text":"Aliases: public ID","title":"Other properties"},{"location":"classes/","text":"Slot: classes class definitions URI: linkml:classes Domain and Range SchemaDefinition \u2192 0..* ClassDefinition Parents Children Used by SchemaDefinition","title":"Slot: classes"},{"location":"classes/#slot-classes","text":"class definitions URI: linkml:classes","title":"Slot: classes"},{"location":"classes/#domain-and-range","text":"SchemaDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"classes/#parents","text":"","title":"Parents"},{"location":"classes/#children","text":"","title":"Children"},{"location":"classes/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"classification_rules/","text":"Slot: classification_rules the collection of classification rules that apply to all members of this class URI: linkml:classification_rules Domain and Range ClassDefinition \u2192 0..* AnonymousClassExpression Parents Children Used by ClassDefinition","title":"Slot: classification_rules"},{"location":"classification_rules/#slot-classification_rules","text":"the collection of classification rules that apply to all members of this class URI: linkml:classification_rules","title":"Slot: classification_rules"},{"location":"classification_rules/#domain-and-range","text":"ClassDefinition \u2192 0..* AnonymousClassExpression","title":"Domain and Range"},{"location":"classification_rules/#parents","text":"","title":"Parents"},{"location":"classification_rules/#children","text":"","title":"Children"},{"location":"classification_rules/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"close_mappings/","text":"Slot: close mappings A list of terms from different schemas or terminology systems that have close meaning. URI: linkml:close_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:closeMatch","title":"Slot: close mappings"},{"location":"close_mappings/#slot-close-mappings","text":"A list of terms from different schemas or terminology systems that have close meaning. URI: linkml:close_mappings","title":"Slot: close mappings"},{"location":"close_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"close_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"close_mappings/#children","text":"","title":"Children"},{"location":"close_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"close_mappings/#other-properties","text":"Mappings: skos:closeMatch","title":"Other properties"},{"location":"code_set/","text":"Slot: code_set the identifier of an enumeration code set. URI: linkml:code_set Domain and Range EnumDefinition \u2192 0..1 Uriorcurie Parents Children Used by EnumDefinition","title":"Slot: code_set"},{"location":"code_set/#slot-code_set","text":"the identifier of an enumeration code set. URI: linkml:code_set","title":"Slot: code_set"},{"location":"code_set/#domain-and-range","text":"EnumDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"code_set/#parents","text":"","title":"Parents"},{"location":"code_set/#children","text":"","title":"Children"},{"location":"code_set/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"code_set_tag/","text":"Slot: code_set_tag the version tag of the enumeration code set URI: linkml:code_set_tag Domain and Range EnumDefinition \u2192 0..1 String Parents Children Used by EnumDefinition Other properties Comments: enum_definition cannot have both a code_set_tag and a code_set_version","title":"Slot: code_set_tag"},{"location":"code_set_tag/#slot-code_set_tag","text":"the version tag of the enumeration code set URI: linkml:code_set_tag","title":"Slot: code_set_tag"},{"location":"code_set_tag/#domain-and-range","text":"EnumDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"code_set_tag/#parents","text":"","title":"Parents"},{"location":"code_set_tag/#children","text":"","title":"Children"},{"location":"code_set_tag/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"code_set_tag/#other-properties","text":"Comments: enum_definition cannot have both a code_set_tag and a code_set_version","title":"Other properties"},{"location":"code_set_version/","text":"Slot: code_set_version the version identifier of the enumeration code set URI: linkml:code_set_version Domain and Range EnumDefinition \u2192 0..1 String Parents Children Used by EnumDefinition Other properties Comments: we assume that version identifiers lexically sort in temporal order. Recommend semver when possible","title":"Slot: code_set_version"},{"location":"code_set_version/#slot-code_set_version","text":"the version identifier of the enumeration code set URI: linkml:code_set_version","title":"Slot: code_set_version"},{"location":"code_set_version/#domain-and-range","text":"EnumDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"code_set_version/#parents","text":"","title":"Parents"},{"location":"code_set_version/#children","text":"","title":"Children"},{"location":"code_set_version/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"code_set_version/#other-properties","text":"Comments: we assume that version identifiers lexically sort in temporal order. Recommend semver when possible","title":"Other properties"},{"location":"comments/","text":"Slot: comments notes and comments about an element intended for external consumption URI: linkml:comments Domain and Range Element \u2192 0..* String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:note In Subsets: owl","title":"Slot: comments"},{"location":"comments/#slot-comments","text":"notes and comments about an element intended for external consumption URI: linkml:comments","title":"Slot: comments"},{"location":"comments/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"comments/#parents","text":"","title":"Parents"},{"location":"comments/#children","text":"","title":"Children"},{"location":"comments/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"comments/#other-properties","text":"Mappings: skos:note In Subsets: owl","title":"Other properties"},{"location":"conforms_to/","text":"Slot: conforms_to An established standard to which the element conforms. URI: linkml:conforms_to Domain and Range Element \u2192 0..1 String Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: dcterms:conformsTo","title":"Slot: conforms_to"},{"location":"conforms_to/#slot-conforms_to","text":"An established standard to which the element conforms. URI: linkml:conforms_to","title":"Slot: conforms_to"},{"location":"conforms_to/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"conforms_to/#parents","text":"","title":"Parents"},{"location":"conforms_to/#children","text":"","title":"Children"},{"location":"conforms_to/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"conforms_to/#other-properties","text":"Mappings: dcterms:conformsTo","title":"Other properties"},{"location":"created_by/","text":"Slot: created_by agent that created the element URI: linkml:created_by Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: pav:createdBy","title":"Slot: created_by"},{"location":"created_by/#slot-created_by","text":"agent that created the element URI: linkml:created_by","title":"Slot: created_by"},{"location":"created_by/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"created_by/#parents","text":"","title":"Parents"},{"location":"created_by/#children","text":"","title":"Children"},{"location":"created_by/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"created_by/#other-properties","text":"Mappings: pav:createdBy","title":"Other properties"},{"location":"created_on/","text":"Slot: created_on time at which the element was created URI: linkml:created_on Domain and Range Element \u2192 0..1 Datetime Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: pav:createdOn","title":"Slot: created_on"},{"location":"created_on/#slot-created_on","text":"time at which the element was created URI: linkml:created_on","title":"Slot: created_on"},{"location":"created_on/#domain-and-range","text":"Element \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"created_on/#parents","text":"","title":"Parents"},{"location":"created_on/#children","text":"","title":"Children"},{"location":"created_on/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"created_on/#other-properties","text":"Mappings: pav:createdOn","title":"Other properties"},{"location":"credits/","text":"Credits this project was made using the Link Model Language (LinkML) framework","title":"Credits"},{"location":"credits/#credits","text":"this project was made using the Link Model Language (LinkML) framework","title":"Credits"},{"location":"deactivated/","text":"Slot: deactivated a deactivated rule is not executed by the rules engine URI: linkml:deactivated Domain and Range None \u2192 0..1 Boolean Parents Children Used by ClassRule Other properties Mappings: sh:deactivated","title":"Slot: deactivated"},{"location":"deactivated/#slot-deactivated","text":"a deactivated rule is not executed by the rules engine URI: linkml:deactivated","title":"Slot: deactivated"},{"location":"deactivated/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"deactivated/#parents","text":"","title":"Parents"},{"location":"deactivated/#children","text":"","title":"Children"},{"location":"deactivated/#used-by","text":"ClassRule","title":"Used by"},{"location":"deactivated/#other-properties","text":"Mappings: sh:deactivated","title":"Other properties"},{"location":"default_curi_maps/","text":"Slot: default_curi_maps ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables URI: linkml:default_curi_maps Domain and Range SchemaDefinition \u2192 0..* String Parents Children Used by SchemaDefinition","title":"Slot: default_curi_maps"},{"location":"default_curi_maps/#slot-default_curi_maps","text":"ordered list of prefixcommon biocontexts to be fetched to resolve id prefixes and inline prefix variables URI: linkml:default_curi_maps","title":"Slot: default_curi_maps"},{"location":"default_curi_maps/#domain-and-range","text":"SchemaDefinition \u2192 0..* String","title":"Domain and Range"},{"location":"default_curi_maps/#parents","text":"","title":"Parents"},{"location":"default_curi_maps/#children","text":"","title":"Children"},{"location":"default_curi_maps/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"default_prefix/","text":"Slot: default_prefix default and base prefix -- used for ':' identifiers, @base and @vocab URI: linkml:default_prefix Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition","title":"Slot: default_prefix"},{"location":"default_prefix/#slot-default_prefix","text":"default and base prefix -- used for ':' identifiers, @base and @vocab URI: linkml:default_prefix","title":"Slot: default_prefix"},{"location":"default_prefix/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"default_prefix/#parents","text":"","title":"Parents"},{"location":"default_prefix/#children","text":"","title":"Children"},{"location":"default_prefix/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"default_range/","text":"Slot: default_range default slot range to be used if range element is omitted from a slot definition URI: linkml:default_range Domain and Range SchemaDefinition \u2192 0..1 TypeDefinition Parents Children Used by SchemaDefinition","title":"Slot: default_range"},{"location":"default_range/#slot-default_range","text":"default slot range to be used if range element is omitted from a slot definition URI: linkml:default_range","title":"Slot: default_range"},{"location":"default_range/#domain-and-range","text":"SchemaDefinition \u2192 0..1 TypeDefinition","title":"Domain and Range"},{"location":"default_range/#parents","text":"","title":"Parents"},{"location":"default_range/#children","text":"","title":"Children"},{"location":"default_range/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"defining_slots/","text":"Slot: defining_slots The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom URI: linkml:defining_slots Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition","title":"Slot: defining_slots"},{"location":"defining_slots/#slot-defining_slots","text":"The combination of is a plus defining slots form a genus-differentia definition, or the set of necessary and sufficient conditions that can be transformed into an OWL equivalence axiom URI: linkml:defining_slots","title":"Slot: defining_slots"},{"location":"defining_slots/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"defining_slots/#parents","text":"","title":"Parents"},{"location":"defining_slots/#children","text":"","title":"Children"},{"location":"defining_slots/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"definition_uri/","text":"Slot: definition_uri the \"native\" URI of the element URI: linkml:definition_uri Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Comments: Formed by combining the default_prefix with the mangled element","title":"Slot: definition_uri"},{"location":"definition_uri/#slot-definition_uri","text":"the \"native\" URI of the element URI: linkml:definition_uri","title":"Slot: definition_uri"},{"location":"definition_uri/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"definition_uri/#parents","text":"","title":"Parents"},{"location":"definition_uri/#children","text":"","title":"Children"},{"location":"definition_uri/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"definition_uri/#other-properties","text":"Comments: Formed by combining the default_prefix with the mangled element","title":"Other properties"},{"location":"deprecated/","text":"Slot: deprecated Description of why and when this element will no longer be used URI: linkml:deprecated Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: deprecated"},{"location":"deprecated/#slot-deprecated","text":"Description of why and when this element will no longer be used URI: linkml:deprecated","title":"Slot: deprecated"},{"location":"deprecated/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"deprecated/#parents","text":"","title":"Parents"},{"location":"deprecated/#children","text":"","title":"Children"},{"location":"deprecated/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"deprecated_element_has_exact_replacement/","text":"Slot: deprecated element has exact replacement When an element is deprecated, it can be automatically replaced by this uri or curie URI: linkml:deprecated_element_has_exact_replacement Domain and Range None \u2192 0..1 Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: IAO:0100001","title":"Slot: deprecated element has exact replacement"},{"location":"deprecated_element_has_exact_replacement/#slot-deprecated-element-has-exact-replacement","text":"When an element is deprecated, it can be automatically replaced by this uri or curie URI: linkml:deprecated_element_has_exact_replacement","title":"Slot: deprecated element has exact replacement"},{"location":"deprecated_element_has_exact_replacement/#domain-and-range","text":"None \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"deprecated_element_has_exact_replacement/#parents","text":"","title":"Parents"},{"location":"deprecated_element_has_exact_replacement/#children","text":"","title":"Children"},{"location":"deprecated_element_has_exact_replacement/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"deprecated_element_has_exact_replacement/#other-properties","text":"Mappings: IAO:0100001","title":"Other properties"},{"location":"deprecated_element_has_possible_replacement/","text":"Slot: deprecated element has possible replacement When an element is deprecated, it can be potentially replaced by this uri or curie URI: linkml:deprecated_element_has_possible_replacement Domain and Range None \u2192 0..1 Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: OIO:consider","title":"Slot: deprecated element has possible replacement"},{"location":"deprecated_element_has_possible_replacement/#slot-deprecated-element-has-possible-replacement","text":"When an element is deprecated, it can be potentially replaced by this uri or curie URI: linkml:deprecated_element_has_possible_replacement","title":"Slot: deprecated element has possible replacement"},{"location":"deprecated_element_has_possible_replacement/#domain-and-range","text":"None \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"deprecated_element_has_possible_replacement/#parents","text":"","title":"Parents"},{"location":"deprecated_element_has_possible_replacement/#children","text":"","title":"Children"},{"location":"deprecated_element_has_possible_replacement/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"deprecated_element_has_possible_replacement/#other-properties","text":"Mappings: OIO:consider","title":"Other properties"},{"location":"description/","text":"Slot: description a description of the element's purpose and use URI: linkml:description Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Aliases: definition Mappings: skos:definition In Subsets: owl","title":"Slot: description"},{"location":"description/#slot-description","text":"a description of the element's purpose and use URI: linkml:description","title":"Slot: description"},{"location":"description/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"description/#parents","text":"","title":"Parents"},{"location":"description/#children","text":"","title":"Children"},{"location":"description/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"description/#other-properties","text":"Aliases: definition Mappings: skos:definition In Subsets: owl","title":"Other properties"},{"location":"designates_type/","text":"Slot: designates_type True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition URI: linkml:designates_type Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Aliases: type designator","title":"Slot: designates_type"},{"location":"designates_type/#slot-designates_type","text":"True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition URI: linkml:designates_type","title":"Slot: designates_type"},{"location":"designates_type/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"designates_type/#parents","text":"","title":"Parents"},{"location":"designates_type/#children","text":"","title":"Children"},{"location":"designates_type/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"designates_type/#other-properties","text":"Aliases: type designator","title":"Other properties"},{"location":"disjoint_with/","text":"Slot: disjoint_with Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances URI: linkml:disjoint_with Domain and Range Definition \u2192 0..* Definition Parents Children class_definition\u279edisjoint_with slot_definition\u279edisjoint_with Used by","title":"Slot: disjoint_with"},{"location":"disjoint_with/#slot-disjoint_with","text":"Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances URI: linkml:disjoint_with","title":"Slot: disjoint_with"},{"location":"disjoint_with/#domain-and-range","text":"Definition \u2192 0..* Definition","title":"Domain and Range"},{"location":"disjoint_with/#parents","text":"","title":"Parents"},{"location":"disjoint_with/#children","text":"class_definition\u279edisjoint_with slot_definition\u279edisjoint_with","title":"Children"},{"location":"disjoint_with/#used-by","text":"","title":"Used by"},{"location":"domain/","text":"Slot: domain defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 URI: linkml:domain Domain and Range SlotDefinition \u2192 0..1 ClassDefinition Parents Children Used by SlotDefinition","title":"Slot: domain"},{"location":"domain/#slot-domain","text":"defines the type of the subject of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts that X is an instance of C1 URI: linkml:domain","title":"Slot: domain"},{"location":"domain/#domain-and-range","text":"SlotDefinition \u2192 0..1 ClassDefinition","title":"Domain and Range"},{"location":"domain/#parents","text":"","title":"Parents"},{"location":"domain/#children","text":"","title":"Children"},{"location":"domain/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"domain_of/","text":"Slot: domain_of the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context URI: linkml:domain_of Domain and Range SlotDefinition \u2192 0..* ClassDefinition Parents Children Used by SlotDefinition","title":"Slot: domain_of"},{"location":"domain_of/#slot-domain_of","text":"the class(es) that reference the slot in a \"slots\" or \"slot_usage\" context URI: linkml:domain_of","title":"Slot: domain_of"},{"location":"domain_of/#domain-and-range","text":"SlotDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"domain_of/#parents","text":"","title":"Parents"},{"location":"domain_of/#children","text":"","title":"Children"},{"location":"domain_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"elseconditions/","text":"Slot: elseconditions an expression that must hold for an instance of the class, if the preconditions no not hold URI: linkml:elseconditions Domain and Range None \u2192 0..1 AnonymousClassExpression Parents Children Used by ClassRule Other properties Aliases: else","title":"Slot: elseconditions"},{"location":"elseconditions/#slot-elseconditions","text":"an expression that must hold for an instance of the class, if the preconditions no not hold URI: linkml:elseconditions","title":"Slot: elseconditions"},{"location":"elseconditions/#domain-and-range","text":"None \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"elseconditions/#parents","text":"","title":"Parents"},{"location":"elseconditions/#children","text":"","title":"Children"},{"location":"elseconditions/#used-by","text":"ClassRule","title":"Used by"},{"location":"elseconditions/#other-properties","text":"Aliases: else","title":"Other properties"},{"location":"emit_prefixes/","text":"Slot: emit_prefixes a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. URI: linkml:emit_prefixes Domain and Range SchemaDefinition \u2192 0..* Ncname Parents Children Used by SchemaDefinition","title":"Slot: emit_prefixes"},{"location":"emit_prefixes/#slot-emit_prefixes","text":"a list of Curie prefixes that are used in the representation of instances of the model. All prefixes in this list are added to the prefix sections of the target models. URI: linkml:emit_prefixes","title":"Slot: emit_prefixes"},{"location":"emit_prefixes/#domain-and-range","text":"SchemaDefinition \u2192 0..* Ncname","title":"Domain and Range"},{"location":"emit_prefixes/#parents","text":"","title":"Parents"},{"location":"emit_prefixes/#children","text":"","title":"Children"},{"location":"emit_prefixes/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"enums/","text":"Slot: enums enumerated ranges URI: linkml:enums Domain and Range SchemaDefinition \u2192 0..* EnumDefinition Parents Children Used by SchemaDefinition","title":"Slot: enums"},{"location":"enums/#slot-enums","text":"enumerated ranges URI: linkml:enums","title":"Slot: enums"},{"location":"enums/#domain-and-range","text":"SchemaDefinition \u2192 0..* EnumDefinition","title":"Domain and Range"},{"location":"enums/#parents","text":"","title":"Parents"},{"location":"enums/#children","text":"","title":"Children"},{"location":"enums/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"equals_expression/","text":"Slot: equals_expression the value of the slot must equal the value of the evaluated expression URI: linkml:equals_expression Domain and Range None \u2192 0..1 String Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Comments: for example, a 'length' slot may have an equals_expression with value '(end-start)+1' See also: https://github.com/linkml/linkml/issues/75","title":"Slot: equals_expression"},{"location":"equals_expression/#slot-equals_expression","text":"the value of the slot must equal the value of the evaluated expression URI: linkml:equals_expression","title":"Slot: equals_expression"},{"location":"equals_expression/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"equals_expression/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"equals_expression/#children","text":"","title":"Children"},{"location":"equals_expression/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"equals_expression/#other-properties","text":"Comments: for example, a 'length' slot may have an equals_expression with value '(end-start)+1' See also: https://github.com/linkml/linkml/issues/75","title":"Other properties"},{"location":"equals_number/","text":"Slot: equals_number the slot must have range of a number and the value of the slot must equal the specified value URI: linkml:equals_number Domain and Range None \u2192 0..1 Integer Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: equals_number"},{"location":"equals_number/#slot-equals_number","text":"the slot must have range of a number and the value of the slot must equal the specified value URI: linkml:equals_number","title":"Slot: equals_number"},{"location":"equals_number/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"equals_number/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"equals_number/#children","text":"","title":"Children"},{"location":"equals_number/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"equals_number_in/","text":"Slot: equals_number_in the slot must have range number and the value of the slot must equal one of the specified values URI: linkml:equals_number_in Domain and Range None \u2192 0..* Integer Parents is_a: list_value_specification_constant Children Used by","title":"Slot: equals_number_in"},{"location":"equals_number_in/#slot-equals_number_in","text":"the slot must have range number and the value of the slot must equal one of the specified values URI: linkml:equals_number_in","title":"Slot: equals_number_in"},{"location":"equals_number_in/#domain-and-range","text":"None \u2192 0..* Integer","title":"Domain and Range"},{"location":"equals_number_in/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"equals_number_in/#children","text":"","title":"Children"},{"location":"equals_number_in/#used-by","text":"","title":"Used by"},{"location":"equals_string/","text":"Slot: equals_string the slot must have range string and the value of the slot must equal the specified value URI: linkml:equals_string Domain and Range None \u2192 0..1 String Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: equals_string"},{"location":"equals_string/#slot-equals_string","text":"the slot must have range string and the value of the slot must equal the specified value URI: linkml:equals_string","title":"Slot: equals_string"},{"location":"equals_string/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"equals_string/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"equals_string/#children","text":"","title":"Children"},{"location":"equals_string/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"equals_string_in/","text":"Slot: equals_string_in the slot must have range string and the value of the slot must equal one of the specified values URI: linkml:equals_string_in Domain and Range None \u2192 0..* String Parents is_a: list_value_specification_constant Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: equals_string_in"},{"location":"equals_string_in/#slot-equals_string_in","text":"the slot must have range string and the value of the slot must equal one of the specified values URI: linkml:equals_string_in","title":"Slot: equals_string_in"},{"location":"equals_string_in/#domain-and-range","text":"None \u2192 0..* String","title":"Domain and Range"},{"location":"equals_string_in/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"equals_string_in/#children","text":"","title":"Children"},{"location":"equals_string_in/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"exact_mappings/","text":"Slot: exact mappings A list of terms from different schemas or terminology systems that have identical meaning. URI: linkml:exact_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:exactMatch","title":"Slot: exact mappings"},{"location":"exact_mappings/#slot-exact-mappings","text":"A list of terms from different schemas or terminology systems that have identical meaning. URI: linkml:exact_mappings","title":"Slot: exact mappings"},{"location":"exact_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"exact_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"exact_mappings/#children","text":"","title":"Children"},{"location":"exact_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"exact_mappings/#other-properties","text":"Mappings: skos:exactMatch","title":"Other properties"},{"location":"exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:exactly_one_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of Used by Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:exactly_one_of","title":"Slot: exactly_one_of"},{"location":"exactly_one_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"exactly_one_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"exactly_one_of/#children","text":"class_expression\u279eexactly_one_of path_expression\u279eexactly_one_of slot_expression\u279eexactly_one_of type_expression\u279eexactly_one_of","title":"Children"},{"location":"exactly_one_of/#used-by","text":"","title":"Used by"},{"location":"exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"examples/","text":"Slot: examples example usages of an element URI: linkml:examples Domain and Range Element \u2192 0..* Example Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties In Subsets: owl","title":"Slot: examples"},{"location":"examples/#slot-examples","text":"example usages of an element URI: linkml:examples","title":"Slot: examples"},{"location":"examples/#domain-and-range","text":"Element \u2192 0..* Example","title":"Domain and Range"},{"location":"examples/#parents","text":"","title":"Parents"},{"location":"examples/#children","text":"","title":"Children"},{"location":"examples/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"examples/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"extension_tag/","text":"Slot: tag a tag associated with an extension URI: linkml:extension_tag Domain and Range Extension \u2192 1..1 Uriorcurie Parents Children Used by Annotation Extension","title":"Slot: tag"},{"location":"extension_tag/#slot-tag","text":"a tag associated with an extension URI: linkml:extension_tag","title":"Slot: tag"},{"location":"extension_tag/#domain-and-range","text":"Extension \u2192 1..1 Uriorcurie","title":"Domain and Range"},{"location":"extension_tag/#parents","text":"","title":"Parents"},{"location":"extension_tag/#children","text":"","title":"Children"},{"location":"extension_tag/#used-by","text":"Annotation Extension","title":"Used by"},{"location":"extension_value/","text":"Slot: value the actual annotation URI: linkml:extension_value Domain and Range Extension \u2192 1..1 String Parents Children Used by Annotation Extension","title":"Slot: value"},{"location":"extension_value/#slot-value","text":"the actual annotation URI: linkml:extension_value","title":"Slot: value"},{"location":"extension_value/#domain-and-range","text":"Extension \u2192 1..1 String","title":"Domain and Range"},{"location":"extension_value/#parents","text":"","title":"Parents"},{"location":"extension_value/#children","text":"","title":"Children"},{"location":"extension_value/#used-by","text":"Annotation Extension","title":"Used by"},{"location":"extensions/","text":"Slot: extensions a tag/text tuple attached to an arbitrary element URI: linkml:extensions Domain and Range Extensible \u2192 0..* Extension Parents Children annotations Used by Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition Extensible Extension PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: extensions"},{"location":"extensions/#slot-extensions","text":"a tag/text tuple attached to an arbitrary element URI: linkml:extensions","title":"Slot: extensions"},{"location":"extensions/#domain-and-range","text":"Extensible \u2192 0..* Extension","title":"Domain and Range"},{"location":"extensions/#parents","text":"","title":"Parents"},{"location":"extensions/#children","text":"annotations","title":"Children"},{"location":"extensions/#used-by","text":"Annotation AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule Definition Element EnumDefinition Extensible Extension PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"followed_by/","text":"Slot: followed_by in a sequential list, this indicates the next member URI: linkml:followed_by Domain and Range None \u2192 0..1 Expression Parents Children path_expression\u279efollowed_by Used by","title":"Slot: followed_by"},{"location":"followed_by/#slot-followed_by","text":"in a sequential list, this indicates the next member URI: linkml:followed_by","title":"Slot: followed_by"},{"location":"followed_by/#domain-and-range","text":"None \u2192 0..1 Expression","title":"Domain and Range"},{"location":"followed_by/#parents","text":"","title":"Parents"},{"location":"followed_by/#children","text":"path_expression\u279efollowed_by","title":"Children"},{"location":"followed_by/#used-by","text":"","title":"Used by"},{"location":"from_schema/","text":"Slot: from_schema id of the schema that defined the element URI: linkml:from_schema Domain and Range Element \u2192 0..1 Uri Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:inScheme","title":"Slot: from_schema"},{"location":"from_schema/#slot-from_schema","text":"id of the schema that defined the element URI: linkml:from_schema","title":"Slot: from_schema"},{"location":"from_schema/#domain-and-range","text":"Element \u2192 0..1 Uri","title":"Domain and Range"},{"location":"from_schema/#parents","text":"","title":"Parents"},{"location":"from_schema/#children","text":"","title":"Children"},{"location":"from_schema/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"from_schema/#other-properties","text":"Mappings: skos:inScheme","title":"Other properties"},{"location":"generation_date/","text":"Slot: generation_date date and time that the schema was loaded/generated URI: linkml:generation_date Domain and Range SchemaDefinition \u2192 0..1 Datetime Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: generation_date"},{"location":"generation_date/#slot-generation_date","text":"date and time that the schema was loaded/generated URI: linkml:generation_date","title":"Slot: generation_date"},{"location":"generation_date/#domain-and-range","text":"SchemaDefinition \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"generation_date/#parents","text":"","title":"Parents"},{"location":"generation_date/#children","text":"","title":"Children"},{"location":"generation_date/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"generation_date/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"has_member/","text":"Slot: has_member the values of the slot is multivalued with at least one member satisfying the condition URI: linkml:has_member Domain and Range None \u2192 0..1 AnonymousSlotExpression Parents is_a: list_value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: has_member"},{"location":"has_member/#slot-has_member","text":"the values of the slot is multivalued with at least one member satisfying the condition URI: linkml:has_member","title":"Slot: has_member"},{"location":"has_member/#domain-and-range","text":"None \u2192 0..1 AnonymousSlotExpression","title":"Domain and Range"},{"location":"has_member/#parents","text":"is_a: list_value_specification_constant","title":"Parents"},{"location":"has_member/#children","text":"","title":"Children"},{"location":"has_member/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"home/","text":"Introduction Welcome to the LinkML metamodel reference guide. For full documentation see linkml.io/linkml/ .","title":"Home"},{"location":"home/#introduction","text":"Welcome to the LinkML metamodel reference guide. For full documentation see linkml.io/linkml/ .","title":"Introduction"},{"location":"id/","text":"Slot: id The official schema URI URI: linkml:id Domain and Range SchemaDefinition \u2192 1..1 Uri Parents Children Used by SchemaDefinition","title":"Slot: id"},{"location":"id/#slot-id","text":"The official schema URI URI: linkml:id","title":"Slot: id"},{"location":"id/#domain-and-range","text":"SchemaDefinition \u2192 1..1 Uri","title":"Domain and Range"},{"location":"id/#parents","text":"","title":"Parents"},{"location":"id/#children","text":"","title":"Children"},{"location":"id/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"id_prefixes/","text":"Slot: id_prefixes the identifier of this class or slot must begin with the URIs referenced by this prefix URI: linkml:id_prefixes Domain and Range Element \u2192 0..* Ncname Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Comments: Order of elements may be used to indicate priority order If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by : ( should start if the list is open) If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix ( should start if the list is open) See also: https://github.com/linkml/linkml/issues/194 https://github.com/linkml/linkml-model/issues/28","title":"Slot: id_prefixes"},{"location":"id_prefixes/#slot-id_prefixes","text":"the identifier of this class or slot must begin with the URIs referenced by this prefix URI: linkml:id_prefixes","title":"Slot: id_prefixes"},{"location":"id_prefixes/#domain-and-range","text":"Element \u2192 0..* Ncname","title":"Domain and Range"},{"location":"id_prefixes/#parents","text":"","title":"Parents"},{"location":"id_prefixes/#children","text":"","title":"Children"},{"location":"id_prefixes/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"id_prefixes/#other-properties","text":"Comments: Order of elements may be used to indicate priority order If identifiers are treated as CURIEs, then the CURIE must start with one of the indicated prefixes followed by : ( should start if the list is open) If identifiers are treated as URIs, then the URI string must start with the expanded for of the prefix ( should start if the list is open) See also: https://github.com/linkml/linkml/issues/194 https://github.com/linkml/linkml-model/issues/28","title":"Other properties"},{"location":"identifier/","text":"Slot: identifier True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container URI: linkml:identifier Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Aliases: primary key ID UID code Comments: identifier is inherited a key slot is automatically required. Identifiers cannot be optional a given domain can have at most one identifier identifiers and keys are mutually exclusive. A given domain cannot have both See also: https://en.wikipedia.org/wiki/Identifier","title":"Slot: identifier"},{"location":"identifier/#slot-identifier","text":"True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container URI: linkml:identifier","title":"Slot: identifier"},{"location":"identifier/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"identifier/#parents","text":"","title":"Parents"},{"location":"identifier/#children","text":"","title":"Children"},{"location":"identifier/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"identifier/#other-properties","text":"Aliases: primary key ID UID code Comments: identifier is inherited a key slot is automatically required. Identifiers cannot be optional a given domain can have at most one identifier identifiers and keys are mutually exclusive. A given domain cannot have both See also: https://en.wikipedia.org/wiki/Identifier","title":"Other properties"},{"location":"ifabsent/","text":"Slot: ifabsent function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: * [Tt]rue -- boolean True * [Ff]alse -- boolean False * int(value) -- integer value * str(value) -- string value * default_range -- schema default range * bnode -- blank node identifier * slot_uri -- URI for the slot * class_curie -- CURIE for the containing class * class_uri -- URI for the containing class URI: linkml:ifabsent Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition Other properties Close Mappings: sh:defaultValue","title":"Slot: ifabsent"},{"location":"ifabsent/#slot-ifabsent","text":"function that provides a default value for the slot. Possible values for this slot are defined in biolink.utils.ifabsent_functions.default_library: * [Tt]rue -- boolean True * [Ff]alse -- boolean False * int(value) -- integer value * str(value) -- string value * default_range -- schema default range * bnode -- blank node identifier * slot_uri -- URI for the slot * class_curie -- CURIE for the containing class * class_uri -- URI for the containing class URI: linkml:ifabsent","title":"Slot: ifabsent"},{"location":"ifabsent/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"ifabsent/#parents","text":"","title":"Parents"},{"location":"ifabsent/#children","text":"","title":"Children"},{"location":"ifabsent/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"ifabsent/#other-properties","text":"Close Mappings: sh:defaultValue","title":"Other properties"},{"location":"imported_from/","text":"Slot: imported_from the imports entry that this element was derived from. Empty means primary source URI: linkml:imported_from Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: imported_from"},{"location":"imported_from/#slot-imported_from","text":"the imports entry that this element was derived from. Empty means primary source URI: linkml:imported_from","title":"Slot: imported_from"},{"location":"imported_from/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"imported_from/#parents","text":"","title":"Parents"},{"location":"imported_from/#children","text":"","title":"Children"},{"location":"imported_from/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"imports/","text":"Slot: imports other schemas that are included in this schema URI: linkml:imports Domain and Range SchemaDefinition \u2192 0..* Uriorcurie Parents Children Used by SchemaDefinition","title":"Slot: imports"},{"location":"imports/#slot-imports","text":"other schemas that are included in this schema URI: linkml:imports","title":"Slot: imports"},{"location":"imports/#domain-and-range","text":"SchemaDefinition \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"imports/#parents","text":"","title":"Parents"},{"location":"imports/#children","text":"","title":"Children"},{"location":"imports/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"in_subset/","text":"Slot: in_subset used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) URI: linkml:in_subset Domain and Range Element \u2192 0..* SubsetDefinition Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: OIO:inSubset","title":"Slot: in_subset"},{"location":"in_subset/#slot-in_subset","text":"used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph) URI: linkml:in_subset","title":"Slot: in_subset"},{"location":"in_subset/#domain-and-range","text":"Element \u2192 0..* SubsetDefinition","title":"Domain and Range"},{"location":"in_subset/#parents","text":"","title":"Parents"},{"location":"in_subset/#children","text":"","title":"Children"},{"location":"in_subset/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"in_subset/#other-properties","text":"Mappings: OIO:inSubset","title":"Other properties"},{"location":"inherited/","text":"Slot: inherited true means that the value of a slot is inherited by subclasses URI: linkml:inherited Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: Inherited applies to slot values. Parent slots are always inherited by subclasses","title":"Slot: inherited"},{"location":"inherited/#slot-inherited","text":"true means that the value of a slot is inherited by subclasses URI: linkml:inherited","title":"Slot: inherited"},{"location":"inherited/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"inherited/#parents","text":"","title":"Parents"},{"location":"inherited/#children","text":"","title":"Children"},{"location":"inherited/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inherited/#other-properties","text":"Comments: Inherited applies to slot values. Parent slots are always inherited by subclasses","title":"Other properties"},{"location":"inlined/","text":"Slot: inlined True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. URI: linkml:inlined Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: classes without keys or identifiers are necessarily inlined as lists","title":"Slot: inlined"},{"location":"inlined/#slot-inlined","text":"True means that keyed or identified slot appears in an outer structure by value. False means that only the key or identifier for the slot appears within the domain, referencing a structure that appears elsewhere. URI: linkml:inlined","title":"Slot: inlined"},{"location":"inlined/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"inlined/#parents","text":"","title":"Parents"},{"location":"inlined/#children","text":"","title":"Children"},{"location":"inlined/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inlined/#other-properties","text":"Comments: classes without keys or identifiers are necessarily inlined as lists","title":"Other properties"},{"location":"inlined_as_list/","text":"Slot: inlined_as_list True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. URI: linkml:inlined_as_list Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: The default loader will accept either list or dictionary form as input. This parameter controls internal representation and output. A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key is the key or identifier and whose value is the one additional element. This form is still stored according to the inlined_as_list setting.","title":"Slot: inlined_as_list"},{"location":"inlined_as_list/#slot-inlined_as_list","text":"True means that an inlined slot is represented as a list of range instances. False means that an inlined slot is represented as a dictionary, whose key is the slot key or identifier and whose value is the range instance. URI: linkml:inlined_as_list","title":"Slot: inlined_as_list"},{"location":"inlined_as_list/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"inlined_as_list/#parents","text":"","title":"Parents"},{"location":"inlined_as_list/#children","text":"","title":"Children"},{"location":"inlined_as_list/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inlined_as_list/#other-properties","text":"Comments: The default loader will accept either list or dictionary form as input. This parameter controls internal representation and output. A keyed or identified class with one additional slot can be input in a third form, a dictionary whose key is the key or identifier and whose value is the one additional element. This form is still stored according to the inlined_as_list setting.","title":"Other properties"},{"location":"inverse/","text":"Slot: inverse indicates that any instance of d s r implies that there is also an instance of r s' d URI: linkml:inverse Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents Children Used by SlotDefinition Other properties Mappings: owl:inverseOf","title":"Slot: inverse"},{"location":"inverse/#slot-inverse","text":"indicates that any instance of d s r implies that there is also an instance of r s' d URI: linkml:inverse","title":"Slot: inverse"},{"location":"inverse/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"inverse/#parents","text":"","title":"Parents"},{"location":"inverse/#children","text":"","title":"Children"},{"location":"inverse/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"inverse/#other-properties","text":"Mappings: owl:inverseOf","title":"Other properties"},{"location":"irreflexive/","text":"Slot: irreflexive If s is irreflexive, then there exists no i such i.s=i URI: linkml:irreflexive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Close Mappings: owl:IrreflexiveProperty","title":"Slot: irreflexive"},{"location":"irreflexive/#slot-irreflexive","text":"If s is irreflexive, then there exists no i such i.s=i URI: linkml:irreflexive","title":"Slot: irreflexive"},{"location":"irreflexive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"irreflexive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"irreflexive/#children","text":"","title":"Children"},{"location":"irreflexive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"irreflexive/#other-properties","text":"Close Mappings: owl:IrreflexiveProperty","title":"Other properties"},{"location":"is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:is_a Domain and Range Definition \u2192 0..1 Definition Parents Children class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a Used by AnonymousClassExpression Definition","title":"Slot: is_a"},{"location":"is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:is_a","title":"Slot: is_a"},{"location":"is_a/#domain-and-range","text":"Definition \u2192 0..1 Definition","title":"Domain and Range"},{"location":"is_a/#parents","text":"","title":"Parents"},{"location":"is_a/#children","text":"class_definition\u279eis_a permissible_value\u279eis_a slot_definition\u279eis_a","title":"Children"},{"location":"is_a/#used-by","text":"AnonymousClassExpression Definition","title":"Used by"},{"location":"is_class_field/","text":"Slot: is_class_field indicates that any instance, i, the domain of this slot will include an assert of i s range URI: linkml:is_class_field Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition","title":"Slot: is_class_field"},{"location":"is_class_field/#slot-is_class_field","text":"indicates that any instance, i, the domain of this slot will include an assert of i s range URI: linkml:is_class_field","title":"Slot: is_class_field"},{"location":"is_class_field/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"is_class_field/#parents","text":"","title":"Parents"},{"location":"is_class_field/#children","text":"","title":"Children"},{"location":"is_class_field/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"is_grouping_slot/","text":"Slot: is_grouping_slot true if this slot is a grouping slot URI: linkml:is_grouping_slot Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Close Mappings: sh:PropertyGroup","title":"Slot: is_grouping_slot"},{"location":"is_grouping_slot/#slot-is_grouping_slot","text":"true if this slot is a grouping slot URI: linkml:is_grouping_slot","title":"Slot: is_grouping_slot"},{"location":"is_grouping_slot/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"is_grouping_slot/#parents","text":"","title":"Parents"},{"location":"is_grouping_slot/#children","text":"","title":"Children"},{"location":"is_grouping_slot/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"is_grouping_slot/#other-properties","text":"Close Mappings: sh:PropertyGroup","title":"Other properties"},{"location":"is_usage_slot/","text":"Slot: ~~is_usage_slot~~ (deprecated) True means that this slot was defined in a slot_usage situation URI: linkml:is_usage_slot Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition","title":"Slot: ~~is_usage_slot~~ _(deprecated)_"},{"location":"is_usage_slot/#slot-is_usage_slot-deprecated","text":"True means that this slot was defined in a slot_usage situation URI: linkml:is_usage_slot","title":"Slot: ~~is_usage_slot~~ (deprecated)"},{"location":"is_usage_slot/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"is_usage_slot/#parents","text":"","title":"Parents"},{"location":"is_usage_slot/#children","text":"","title":"Children"},{"location":"is_usage_slot/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"key/","text":"Slot: key True means that the key slot(s) uniquely identify the container. URI: linkml:key Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition Other properties Comments: see also 'unique_key' key is inherited a given domain can have at most one key slot (restriction to be removed in the future) identifiers and keys are mutually exclusive. A given domain cannot have both a key slot is automatically required. Keys cannot be optional","title":"Slot: key"},{"location":"key/#slot-key","text":"True means that the key slot(s) uniquely identify the container. URI: linkml:key","title":"Slot: key"},{"location":"key/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"key/#parents","text":"","title":"Parents"},{"location":"key/#children","text":"","title":"Children"},{"location":"key/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"key/#other-properties","text":"Comments: see also 'unique_key' key is inherited a given domain can have at most one key slot (restriction to be removed in the future) identifiers and keys are mutually exclusive. A given domain cannot have both a key slot is automatically required. Keys cannot be optional","title":"Other properties"},{"location":"last_updated_on/","text":"Slot: last_updated_on time at which the element was last updated URI: linkml:last_updated_on Domain and Range Element \u2192 0..1 Datetime Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: pav:lastUpdatedOn","title":"Slot: last_updated_on"},{"location":"last_updated_on/#slot-last_updated_on","text":"time at which the element was last updated URI: linkml:last_updated_on","title":"Slot: last_updated_on"},{"location":"last_updated_on/#domain-and-range","text":"Element \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"last_updated_on/#parents","text":"","title":"Parents"},{"location":"last_updated_on/#children","text":"","title":"Children"},{"location":"last_updated_on/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"last_updated_on/#other-properties","text":"Mappings: pav:lastUpdatedOn","title":"Other properties"},{"location":"license/","text":"Slot: license license for the schema URI: linkml:license Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties Mappings: dcterms:license In Subsets: owl","title":"Slot: license"},{"location":"license/#slot-license","text":"license for the schema URI: linkml:license","title":"Slot: license"},{"location":"license/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"license/#parents","text":"","title":"Parents"},{"location":"license/#children","text":"","title":"Children"},{"location":"license/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"license/#other-properties","text":"Mappings: dcterms:license In Subsets: owl","title":"Other properties"},{"location":"list_value_specification_constant/","text":"Slot: list_value_specification_constant Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant URI: linkml:list_value_specification_constant Domain and Range None \u2192 0..1 String Parents Children all_members equals_number_in equals_string_in has_member Used by","title":"Slot: list_value_specification_constant"},{"location":"list_value_specification_constant/#slot-list_value_specification_constant","text":"Grouping for metamodel slots that constrain members of a multivalued slot value to equal a specified constant URI: linkml:list_value_specification_constant","title":"Slot: list_value_specification_constant"},{"location":"list_value_specification_constant/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"list_value_specification_constant/#parents","text":"","title":"Parents"},{"location":"list_value_specification_constant/#children","text":"all_members equals_number_in equals_string_in has_member","title":"Children"},{"location":"list_value_specification_constant/#used-by","text":"","title":"Used by"},{"location":"local_name_source/","text":"Slot: local_name_source the ncname of the source of the name URI: linkml:local_name_source Domain and Range LocalName \u2192 1..1 Ncname Parents Children Used by LocalName","title":"Slot: local_name_source"},{"location":"local_name_source/#slot-local_name_source","text":"the ncname of the source of the name URI: linkml:local_name_source","title":"Slot: local_name_source"},{"location":"local_name_source/#domain-and-range","text":"LocalName \u2192 1..1 Ncname","title":"Domain and Range"},{"location":"local_name_source/#parents","text":"","title":"Parents"},{"location":"local_name_source/#children","text":"","title":"Children"},{"location":"local_name_source/#used-by","text":"LocalName","title":"Used by"},{"location":"local_name_value/","text":"Slot: local_name_value a name assigned to an element in a given ontology URI: linkml:local_name_value Domain and Range LocalName \u2192 1..1 String Parents Children Used by LocalName Other properties Mappings: skos:altLabel","title":"Slot: local_name_value"},{"location":"local_name_value/#slot-local_name_value","text":"a name assigned to an element in a given ontology URI: linkml:local_name_value","title":"Slot: local_name_value"},{"location":"local_name_value/#domain-and-range","text":"LocalName \u2192 1..1 String","title":"Domain and Range"},{"location":"local_name_value/#parents","text":"","title":"Parents"},{"location":"local_name_value/#children","text":"","title":"Children"},{"location":"local_name_value/#used-by","text":"LocalName","title":"Used by"},{"location":"local_name_value/#other-properties","text":"Mappings: skos:altLabel","title":"Other properties"},{"location":"local_names/","text":"Slot: local_names URI: linkml:local_names Domain and Range Element \u2192 0..* LocalName Parents Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Slot: local_names"},{"location":"local_names/#slot-local_names","text":"URI: linkml:local_names","title":"Slot: local_names"},{"location":"local_names/#domain-and-range","text":"Element \u2192 0..* LocalName","title":"Domain and Range"},{"location":"local_names/#parents","text":"","title":"Parents"},{"location":"local_names/#children","text":"","title":"Children"},{"location":"local_names/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"locally_reflexive/","text":"Slot: locally_reflexive If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i URI: linkml:locally_reflexive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition","title":"Slot: locally_reflexive"},{"location":"locally_reflexive/#slot-locally_reflexive","text":"If s is locally_reflexive, then i.s=i for all instances i where s if a class slot for the type of i URI: linkml:locally_reflexive","title":"Slot: locally_reflexive"},{"location":"locally_reflexive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"locally_reflexive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"locally_reflexive/#children","text":"","title":"Children"},{"location":"locally_reflexive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"mappings/","text":"Slot: mappings A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. URI: linkml:mappings Domain and Range None \u2192 0..* Uriorcurie Parents Children broad mappings close mappings exact mappings narrow mappings related mappings Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Aliases: xrefs identifiers alternate identifiers alternate ids Mappings: skos:mappingRelation","title":"Slot: mappings"},{"location":"mappings/#slot-mappings","text":"A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective. URI: linkml:mappings","title":"Slot: mappings"},{"location":"mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"mappings/#parents","text":"","title":"Parents"},{"location":"mappings/#children","text":"broad mappings close mappings exact mappings narrow mappings related mappings","title":"Children"},{"location":"mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"mappings/#other-properties","text":"Aliases: xrefs identifiers alternate identifiers alternate ids Mappings: skos:mappingRelation","title":"Other properties"},{"location":"maximum_cardinality/","text":"Slot: maximum_cardinality the maximum number of entries for a multivalued slot URI: linkml:maximum_cardinality Domain and Range None \u2192 0..1 Integer Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: maximum_cardinality"},{"location":"maximum_cardinality/#slot-maximum_cardinality","text":"the maximum number of entries for a multivalued slot URI: linkml:maximum_cardinality","title":"Slot: maximum_cardinality"},{"location":"maximum_cardinality/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"maximum_cardinality/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"maximum_cardinality/#children","text":"","title":"Children"},{"location":"maximum_cardinality/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"maximum_value/","text":"Slot: maximum_value for slots with ranges of type number, the value must be equal to or lowe than this URI: linkml:maximum_value Domain and Range SlotDefinition \u2192 0..1 Integer Parents Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression Other properties Aliases: high value","title":"Slot: maximum_value"},{"location":"maximum_value/#slot-maximum_value","text":"for slots with ranges of type number, the value must be equal to or lowe than this URI: linkml:maximum_value","title":"Slot: maximum_value"},{"location":"maximum_value/#domain-and-range","text":"SlotDefinition \u2192 0..1 Integer","title":"Domain and Range"},{"location":"maximum_value/#parents","text":"","title":"Parents"},{"location":"maximum_value/#children","text":"","title":"Children"},{"location":"maximum_value/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"maximum_value/#other-properties","text":"Aliases: high value","title":"Other properties"},{"location":"meaning/","text":"Slot: meaning the value meaning (in the 11179 sense) of a permissible value URI: linkml:meaning Domain and Range PermissibleValue \u2192 0..1 Uriorcurie Parents Children Used by PermissibleValue Other properties Aliases: PV meaning","title":"Slot: meaning"},{"location":"meaning/#slot-meaning","text":"the value meaning (in the 11179 sense) of a permissible value URI: linkml:meaning","title":"Slot: meaning"},{"location":"meaning/#domain-and-range","text":"PermissibleValue \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"meaning/#parents","text":"","title":"Parents"},{"location":"meaning/#children","text":"","title":"Children"},{"location":"meaning/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"meaning/#other-properties","text":"Aliases: PV meaning","title":"Other properties"},{"location":"metamodel_version/","text":"Slot: metamodel_version Version of the metamodel used to load the schema URI: linkml:metamodel_version Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: metamodel_version"},{"location":"metamodel_version/#slot-metamodel_version","text":"Version of the metamodel used to load the schema URI: linkml:metamodel_version","title":"Slot: metamodel_version"},{"location":"metamodel_version/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"metamodel_version/#parents","text":"","title":"Parents"},{"location":"metamodel_version/#children","text":"","title":"Children"},{"location":"metamodel_version/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"metamodel_version/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"minimum_cardinality/","text":"Slot: minimum_cardinality the minimum number of entries for a multivalued slot URI: linkml:minimum_cardinality Domain and Range None \u2192 0..1 Integer Parents is_a: value_specification_constant Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: minimum_cardinality"},{"location":"minimum_cardinality/#slot-minimum_cardinality","text":"the minimum number of entries for a multivalued slot URI: linkml:minimum_cardinality","title":"Slot: minimum_cardinality"},{"location":"minimum_cardinality/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"minimum_cardinality/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"minimum_cardinality/#children","text":"","title":"Children"},{"location":"minimum_cardinality/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"minimum_value/","text":"Slot: minimum_value for slots with ranges of type number, the value must be equal to or higher than this URI: linkml:minimum_value Domain and Range SlotDefinition \u2192 0..1 Integer Parents Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression Other properties Aliases: low value","title":"Slot: minimum_value"},{"location":"minimum_value/#slot-minimum_value","text":"for slots with ranges of type number, the value must be equal to or higher than this URI: linkml:minimum_value","title":"Slot: minimum_value"},{"location":"minimum_value/#domain-and-range","text":"SlotDefinition \u2192 0..1 Integer","title":"Domain and Range"},{"location":"minimum_value/#parents","text":"","title":"Parents"},{"location":"minimum_value/#children","text":"","title":"Children"},{"location":"minimum_value/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"minimum_value/#other-properties","text":"Aliases: low value","title":"Other properties"},{"location":"mixin/","text":"Slot: mixin this slot or class can only be used as a mixin. URI: linkml:mixin Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Aliases: trait See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixin"},{"location":"mixin/#slot-mixin","text":"this slot or class can only be used as a mixin. URI: linkml:mixin","title":"Slot: mixin"},{"location":"mixin/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"mixin/#parents","text":"","title":"Parents"},{"location":"mixin/#children","text":"","title":"Children"},{"location":"mixin/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"mixin/#other-properties","text":"Aliases: trait See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:mixins Domain and Range Definition \u2192 0..* Definition Parents Children class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins Used by Definition Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:mixins","title":"Slot: mixins"},{"location":"mixins/#domain-and-range","text":"Definition \u2192 0..* Definition","title":"Domain and Range"},{"location":"mixins/#parents","text":"","title":"Parents"},{"location":"mixins/#children","text":"class_definition\u279emixins permissible_value\u279emixins slot_definition\u279emixins","title":"Children"},{"location":"mixins/#used-by","text":"Definition","title":"Used by"},{"location":"mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"modified_by/","text":"Slot: modified_by agent that modified the element URI: linkml:modified_by Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Mappings: oslc:modifiedBy","title":"Slot: modified_by"},{"location":"modified_by/#slot-modified_by","text":"agent that modified the element URI: linkml:modified_by","title":"Slot: modified_by"},{"location":"modified_by/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"modified_by/#parents","text":"","title":"Parents"},{"location":"modified_by/#children","text":"","title":"Children"},{"location":"modified_by/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"modified_by/#other-properties","text":"Mappings: oslc:modifiedBy","title":"Other properties"},{"location":"multivalued/","text":"Slot: multivalued true means that slot can have more than one value URI: linkml:multivalued Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by SlotDefinition","title":"Slot: multivalued"},{"location":"multivalued/#slot-multivalued","text":"true means that slot can have more than one value URI: linkml:multivalued","title":"Slot: multivalued"},{"location":"multivalued/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"multivalued/#parents","text":"","title":"Parents"},{"location":"multivalued/#children","text":"","title":"Children"},{"location":"multivalued/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"name/","text":"Slot: name the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:name Domain and Range Element \u2192 1..1 String Parents Children schema_definition\u279ename Used by ClassDefinition Definition Element EnumDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Aliases: short name unique name Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Slot: name"},{"location":"name/#slot-name","text":"the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:name","title":"Slot: name"},{"location":"name/#domain-and-range","text":"Element \u2192 1..1 String","title":"Domain and Range"},{"location":"name/#parents","text":"","title":"Parents"},{"location":"name/#children","text":"schema_definition\u279ename","title":"Children"},{"location":"name/#used-by","text":"ClassDefinition Definition Element EnumDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"name/#other-properties","text":"Aliases: short name unique name Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Other properties"},{"location":"narrow_mappings/","text":"Slot: narrow mappings A list of terms from different schemas or terminology systems that have narrower meaning. URI: linkml:narrow_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:narrowMatch","title":"Slot: narrow mappings"},{"location":"narrow_mappings/#slot-narrow-mappings","text":"A list of terms from different schemas or terminology systems that have narrower meaning. URI: linkml:narrow_mappings","title":"Slot: narrow mappings"},{"location":"narrow_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"narrow_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"narrow_mappings/#children","text":"","title":"Children"},{"location":"narrow_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"narrow_mappings/#other-properties","text":"Mappings: skos:narrowMatch","title":"Other properties"},{"location":"none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:none_of Domain and Range None \u2192 0..* Expression Parents is_a: boolean_slot Children class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of Used by Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:none_of","title":"Slot: none_of"},{"location":"none_of/#domain-and-range","text":"None \u2192 0..* Expression","title":"Domain and Range"},{"location":"none_of/#parents","text":"is_a: boolean_slot","title":"Parents"},{"location":"none_of/#children","text":"class_expression\u279enone_of path_expression\u279enone_of slot_expression\u279enone_of type_expression\u279enone_of","title":"Children"},{"location":"none_of/#used-by","text":"","title":"Used by"},{"location":"none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"notes/","text":"Slot: notes editorial notes about an element intended for internal consumption URI: linkml:notes Domain and Range Element \u2192 0..* String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: skos:editorialNote In Subsets: owl","title":"Slot: notes"},{"location":"notes/#slot-notes","text":"editorial notes about an element intended for internal consumption URI: linkml:notes","title":"Slot: notes"},{"location":"notes/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"notes/#parents","text":"","title":"Parents"},{"location":"notes/#children","text":"","title":"Children"},{"location":"notes/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"notes/#other-properties","text":"Mappings: skos:editorialNote In Subsets: owl","title":"Other properties"},{"location":"open_world/","text":"Slot: open_world if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these URI: linkml:open_world Domain and Range None \u2192 0..1 Boolean Parents Children Used by ClassRule","title":"Slot: open_world"},{"location":"open_world/#slot-open_world","text":"if true, the the postconditions may be omitted in instance data, but it is valid for an inference engine to add these URI: linkml:open_world","title":"Slot: open_world"},{"location":"open_world/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"open_world/#parents","text":"","title":"Parents"},{"location":"open_world/#children","text":"","title":"Children"},{"location":"open_world/#used-by","text":"ClassRule","title":"Used by"},{"location":"owned_by/","text":"Slot: owned_by agent that owns or is the steward of the element URI: linkml:owned_by Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by Other properties Aliases: steward owner Close Mappings: rdfs:isDefinedBy","title":"Slot: owned_by"},{"location":"owned_by/#slot-owned_by","text":"agent that owns or is the steward of the element URI: linkml:owned_by","title":"Slot: owned_by"},{"location":"owned_by/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"owned_by/#parents","text":"","title":"Parents"},{"location":"owned_by/#children","text":"","title":"Children"},{"location":"owned_by/#used-by","text":"","title":"Used by"},{"location":"owned_by/#other-properties","text":"Aliases: steward owner Close Mappings: rdfs:isDefinedBy","title":"Other properties"},{"location":"owner/","text":"Slot: ~~owner~~ (deprecated) the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot URI: linkml:owner Domain and Range SlotDefinition \u2192 0..1 Definition Parents Children Used by SlotDefinition","title":"Slot: ~~owner~~ _(deprecated)_"},{"location":"owner/#slot-owner-deprecated","text":"the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot URI: linkml:owner","title":"Slot: ~~owner~~ (deprecated)"},{"location":"owner/#domain-and-range","text":"SlotDefinition \u2192 0..1 Definition","title":"Domain and Range"},{"location":"owner/#parents","text":"","title":"Parents"},{"location":"owner/#children","text":"","title":"Children"},{"location":"owner/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"path_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:path_expression_all_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: all_of Children Used by PathExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"path_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:path_expression_all_of","title":"Slot: all_of"},{"location":"path_expression_all_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"path_expression_all_of/#children","text":"","title":"Children"},{"location":"path_expression_all_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"path_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:path_expression_any_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: any_of Children Used by PathExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"path_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:path_expression_any_of","title":"Slot: any_of"},{"location":"path_expression_any_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"path_expression_any_of/#children","text":"","title":"Children"},{"location":"path_expression_any_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"path_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:path_expression_exactly_one_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: exactly_one_of Children Used by PathExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"path_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:path_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"path_expression_exactly_one_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"path_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"path_expression_exactly_one_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"path_expression_followed_by/","text":"Slot: followed_by in a sequential list, this indicates the next member URI: linkml:path_expression_followed_by Domain and Range PathExpression \u2192 0..1 PathExpression Parents is_a: followed_by Children Used by PathExpression","title":"Slot: followed_by"},{"location":"path_expression_followed_by/#slot-followed_by","text":"in a sequential list, this indicates the next member URI: linkml:path_expression_followed_by","title":"Slot: followed_by"},{"location":"path_expression_followed_by/#domain-and-range","text":"PathExpression \u2192 0..1 PathExpression","title":"Domain and Range"},{"location":"path_expression_followed_by/#parents","text":"is_a: followed_by","title":"Parents"},{"location":"path_expression_followed_by/#children","text":"","title":"Children"},{"location":"path_expression_followed_by/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:path_expression_none_of Domain and Range PathExpression \u2192 0..* PathExpression Parents is_a: none_of Children Used by PathExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"path_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:path_expression_none_of","title":"Slot: none_of"},{"location":"path_expression_none_of/#domain-and-range","text":"PathExpression \u2192 0..* PathExpression","title":"Domain and Range"},{"location":"path_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"path_expression_none_of/#children","text":"","title":"Children"},{"location":"path_expression_none_of/#used-by","text":"PathExpression","title":"Used by"},{"location":"path_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"path_rule/","text":"Slot: path_rule a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts URI: linkml:path_rule Domain and Range SlotDefinition \u2192 0..1 PathExpression Parents Children Used by SlotDefinition","title":"Slot: path_rule"},{"location":"path_rule/#slot-path_rule","text":"a rule for inferring a slot assignment based on evaluating a path through a sequence of slot assignemnts URI: linkml:path_rule","title":"Slot: path_rule"},{"location":"path_rule/#domain-and-range","text":"SlotDefinition \u2192 0..1 PathExpression","title":"Domain and Range"},{"location":"path_rule/#parents","text":"","title":"Parents"},{"location":"path_rule/#children","text":"","title":"Children"},{"location":"path_rule/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"pattern/","text":"Slot: pattern the string value of the slot must conform to this regular expression URI: linkml:pattern Domain and Range Definition \u2192 0..1 String Parents Children Used by AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Slot: pattern"},{"location":"pattern/#slot-pattern","text":"the string value of the slot must conform to this regular expression URI: linkml:pattern","title":"Slot: pattern"},{"location":"pattern/#domain-and-range","text":"Definition \u2192 0..1 String","title":"Domain and Range"},{"location":"pattern/#parents","text":"","title":"Parents"},{"location":"pattern/#children","text":"","title":"Children"},{"location":"pattern/#used-by","text":"AnonymousSlotExpression AnonymousTypeExpression SlotDefinition SlotExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"permissible_value_is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:permissible_value_is_a Domain and Range PermissibleValue \u2192 0..1 PermissibleValue Parents is_a: is_a Children Used by PermissibleValue","title":"Slot: is_a"},{"location":"permissible_value_is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:permissible_value_is_a","title":"Slot: is_a"},{"location":"permissible_value_is_a/#domain-and-range","text":"PermissibleValue \u2192 0..1 PermissibleValue","title":"Domain and Range"},{"location":"permissible_value_is_a/#parents","text":"is_a: is_a","title":"Parents"},{"location":"permissible_value_is_a/#children","text":"","title":"Children"},{"location":"permissible_value_is_a/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"permissible_value_mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:permissible_value_mixins Domain and Range PermissibleValue \u2192 0..* PermissibleValue Parents is_a: mixins Children Used by PermissibleValue Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"permissible_value_mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:permissible_value_mixins","title":"Slot: mixins"},{"location":"permissible_value_mixins/#domain-and-range","text":"PermissibleValue \u2192 0..* PermissibleValue","title":"Domain and Range"},{"location":"permissible_value_mixins/#parents","text":"is_a: mixins","title":"Parents"},{"location":"permissible_value_mixins/#children","text":"","title":"Children"},{"location":"permissible_value_mixins/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"permissible_value_mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"permissible_values/","text":"Slot: permissible_values A list of possible values for a slot range URI: linkml:permissible_values Domain and Range EnumDefinition \u2192 0..* PermissibleValue Parents Children Used by EnumDefinition","title":"Slot: permissible_values"},{"location":"permissible_values/#slot-permissible_values","text":"A list of possible values for a slot range URI: linkml:permissible_values","title":"Slot: permissible_values"},{"location":"permissible_values/#domain-and-range","text":"EnumDefinition \u2192 0..* PermissibleValue","title":"Domain and Range"},{"location":"permissible_values/#parents","text":"","title":"Parents"},{"location":"permissible_values/#children","text":"","title":"Children"},{"location":"permissible_values/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"postconditions/","text":"Slot: postconditions an expression that must hold for an instance of the class, if the preconditions hold URI: linkml:postconditions Domain and Range None \u2192 0..1 AnonymousClassExpression Parents Children Used by ClassRule Other properties Aliases: then head consequents Close Mappings: swrl:body","title":"Slot: postconditions"},{"location":"postconditions/#slot-postconditions","text":"an expression that must hold for an instance of the class, if the preconditions hold URI: linkml:postconditions","title":"Slot: postconditions"},{"location":"postconditions/#domain-and-range","text":"None \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"postconditions/#parents","text":"","title":"Parents"},{"location":"postconditions/#children","text":"","title":"Children"},{"location":"postconditions/#used-by","text":"ClassRule","title":"Used by"},{"location":"postconditions/#other-properties","text":"Aliases: then head consequents Close Mappings: swrl:body","title":"Other properties"},{"location":"precedence/","text":"Slot: precedence the relative order in which the element occurs URI: linkml:precedence Domain and Range None \u2192 0..1 Integer Parents Children Used by ClassDefinition ClassRule Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: sh:order","title":"Slot: precedence"},{"location":"precedence/#slot-precedence","text":"the relative order in which the element occurs URI: linkml:precedence","title":"Slot: precedence"},{"location":"precedence/#domain-and-range","text":"None \u2192 0..1 Integer","title":"Domain and Range"},{"location":"precedence/#parents","text":"","title":"Parents"},{"location":"precedence/#children","text":"","title":"Children"},{"location":"precedence/#used-by","text":"ClassDefinition ClassRule Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"precedence/#other-properties","text":"Mappings: sh:order","title":"Other properties"},{"location":"preconditions/","text":"Slot: preconditions an expression that must hold in order for the rule to be applicable to an instance URI: linkml:preconditions Domain and Range None \u2192 0..1 AnonymousClassExpression Parents Children Used by ClassRule Other properties Aliases: if body antecedents Mappings: sh:condition Close Mappings: swrl:body","title":"Slot: preconditions"},{"location":"preconditions/#slot-preconditions","text":"an expression that must hold in order for the rule to be applicable to an instance URI: linkml:preconditions","title":"Slot: preconditions"},{"location":"preconditions/#domain-and-range","text":"None \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"preconditions/#parents","text":"","title":"Parents"},{"location":"preconditions/#children","text":"","title":"Children"},{"location":"preconditions/#used-by","text":"ClassRule","title":"Used by"},{"location":"preconditions/#other-properties","text":"Aliases: if body antecedents Mappings: sh:condition Close Mappings: swrl:body","title":"Other properties"},{"location":"prefix_prefix/","text":"Slot: prefix_prefix the nsname (sans ':' for a given prefix) URI: linkml:prefix_prefix Domain and Range Prefix \u2192 1..1 Ncname Parents Children Used by Prefix","title":"Slot: prefix_prefix"},{"location":"prefix_prefix/#slot-prefix_prefix","text":"the nsname (sans ':' for a given prefix) URI: linkml:prefix_prefix","title":"Slot: prefix_prefix"},{"location":"prefix_prefix/#domain-and-range","text":"Prefix \u2192 1..1 Ncname","title":"Domain and Range"},{"location":"prefix_prefix/#parents","text":"","title":"Parents"},{"location":"prefix_prefix/#children","text":"","title":"Children"},{"location":"prefix_prefix/#used-by","text":"Prefix","title":"Used by"},{"location":"prefix_reference/","text":"Slot: prefix_reference A URI associated with a given prefix URI: linkml:prefix_reference Domain and Range Prefix \u2192 1..1 Uri Parents Children Used by Prefix","title":"Slot: prefix_reference"},{"location":"prefix_reference/#slot-prefix_reference","text":"A URI associated with a given prefix URI: linkml:prefix_reference","title":"Slot: prefix_reference"},{"location":"prefix_reference/#domain-and-range","text":"Prefix \u2192 1..1 Uri","title":"Domain and Range"},{"location":"prefix_reference/#parents","text":"","title":"Parents"},{"location":"prefix_reference/#children","text":"","title":"Children"},{"location":"prefix_reference/#used-by","text":"Prefix","title":"Used by"},{"location":"prefixes/","text":"Slot: prefixes prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes URI: linkml:prefixes Domain and Range SchemaDefinition \u2192 0..* Prefix Parents Children Used by SchemaDefinition","title":"Slot: prefixes"},{"location":"prefixes/#slot-prefixes","text":"prefix / URI definitions to be added to the context beyond those fetched from prefixcommons in id prefixes URI: linkml:prefixes","title":"Slot: prefixes"},{"location":"prefixes/#domain-and-range","text":"SchemaDefinition \u2192 0..* Prefix","title":"Domain and Range"},{"location":"prefixes/#parents","text":"","title":"Parents"},{"location":"prefixes/#children","text":"","title":"Children"},{"location":"prefixes/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"presence_enum/","text":"Enum: presence_enum enumeration of conditions by which a slot value should be set URI: linkml:presence_enum Other properties Permissible Values Text Description Meaning Other Information UNCOMMITTED PRESENT ABSENT","title":"Enum: presence_enum"},{"location":"presence_enum/#enum-presence_enum","text":"enumeration of conditions by which a slot value should be set URI: linkml:presence_enum","title":"Enum: presence_enum"},{"location":"presence_enum/#other-properties","text":"","title":"Other properties"},{"location":"presence_enum/#permissible-values","text":"Text Description Meaning Other Information UNCOMMITTED PRESENT ABSENT","title":"Permissible Values"},{"location":"pv_formula/","text":"Slot: pv_formula Defines the specific formula to be used to generate the permissible values. URI: linkml:pv_formula Domain and Range EnumDefinition \u2192 0..1 pv_formula_options Parents Children Used by EnumDefinition Other properties Comments: you cannot have BOTH the permissible_values and permissible_value_formula tag code_set must be supplied for this to be valid","title":"Slot: pv_formula"},{"location":"pv_formula/#slot-pv_formula","text":"Defines the specific formula to be used to generate the permissible values. URI: linkml:pv_formula","title":"Slot: pv_formula"},{"location":"pv_formula/#domain-and-range","text":"EnumDefinition \u2192 0..1 pv_formula_options","title":"Domain and Range"},{"location":"pv_formula/#parents","text":"","title":"Parents"},{"location":"pv_formula/#children","text":"","title":"Children"},{"location":"pv_formula/#used-by","text":"EnumDefinition","title":"Used by"},{"location":"pv_formula/#other-properties","text":"Comments: you cannot have BOTH the permissible_values and permissible_value_formula tag code_set must be supplied for this to be valid","title":"Other properties"},{"location":"pv_formula_options/","text":"Enum: pv_formula_options The formula used to generate the set of permissible values from the code_set values URI: linkml:pv_formula_options Other properties Permissible Values Text Description Meaning Other Information CODE The permissible values are the set of possible codes in the code set CURIE The permissible values are the set of CURIES in the code set URI The permissible values are the set of code URIs in the code set FHIR_CODING The permissible values are the set of FHIR coding elements derived from the code set","title":"Enum: pv_formula_options"},{"location":"pv_formula_options/#enum-pv_formula_options","text":"The formula used to generate the set of permissible values from the code_set values URI: linkml:pv_formula_options","title":"Enum: pv_formula_options"},{"location":"pv_formula_options/#other-properties","text":"","title":"Other properties"},{"location":"pv_formula_options/#permissible-values","text":"Text Description Meaning Other Information CODE The permissible values are the set of possible codes in the code set CURIE The permissible values are the set of CURIES in the code set URI The permissible values are the set of code URIs in the code set FHIR_CODING The permissible values are the set of FHIR coding elements derived from the code set","title":"Permissible Values"},{"location":"range/","text":"Slot: range defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 URI: linkml:range Domain and Range SlotDefinition \u2192 0..1 Element Parents Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Aliases: value domain Comments: range is underspecified, as not all elements can appear as the range of a slot.","title":"Slot: range"},{"location":"range/#slot-range","text":"defines the type of the object of the slot. Given the following slot definition S1: domain: C1 range: C2 the declaration X: S1: Y implicitly asserts Y is an instance of C2 URI: linkml:range","title":"Slot: range"},{"location":"range/#domain-and-range","text":"SlotDefinition \u2192 0..1 Element","title":"Domain and Range"},{"location":"range/#parents","text":"","title":"Parents"},{"location":"range/#children","text":"","title":"Children"},{"location":"range/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"range/#other-properties","text":"Aliases: value domain Comments: range is underspecified, as not all elements can appear as the range of a slot.","title":"Other properties"},{"location":"range_expression/","text":"Slot: range_expression A range that is described as a boolean expression combining existing ranges URI: linkml:range_expression Domain and Range SlotExpression \u2192 0..1 AnonymousClassExpression Parents Children Used by AnonymousSlotExpression PathExpression SlotDefinition SlotExpression Other properties Comments: one use for this is being able to describe a range using any_of expressions, for example to combine two enums","title":"Slot: range_expression"},{"location":"range_expression/#slot-range_expression","text":"A range that is described as a boolean expression combining existing ranges URI: linkml:range_expression","title":"Slot: range_expression"},{"location":"range_expression/#domain-and-range","text":"SlotExpression \u2192 0..1 AnonymousClassExpression","title":"Domain and Range"},{"location":"range_expression/#parents","text":"","title":"Parents"},{"location":"range_expression/#children","text":"","title":"Children"},{"location":"range_expression/#used-by","text":"AnonymousSlotExpression PathExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"range_expression/#other-properties","text":"Comments: one use for this is being able to describe a range using any_of expressions, for example to combine two enums","title":"Other properties"},{"location":"readonly/","text":"Slot: readonly If present, slot is read only. Text explains why URI: linkml:readonly Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition","title":"Slot: readonly"},{"location":"readonly/#slot-readonly","text":"If present, slot is read only. Text explains why URI: linkml:readonly","title":"Slot: readonly"},{"location":"readonly/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"readonly/#parents","text":"","title":"Parents"},{"location":"readonly/#children","text":"","title":"Children"},{"location":"readonly/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"recommended/","text":"Slot: recommended true means that the slot should be present in the loaded definition, but this is not required URI: linkml:recommended Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Comments: This is to be used where not all data is expected to conform to having a required field If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data See also: https://github.com/linkml/linkml/issues/177","title":"Slot: recommended"},{"location":"recommended/#slot-recommended","text":"true means that the slot should be present in the loaded definition, but this is not required URI: linkml:recommended","title":"Slot: recommended"},{"location":"recommended/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"recommended/#parents","text":"","title":"Parents"},{"location":"recommended/#children","text":"","title":"Children"},{"location":"recommended/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"recommended/#other-properties","text":"Comments: This is to be used where not all data is expected to conform to having a required field If a slot is recommended, and it is not populated, applications must not treat this as an error. Applications may use this to inform the user of missing data See also: https://github.com/linkml/linkml/issues/177","title":"Other properties"},{"location":"reflexive/","text":"Slot: reflexive If s is reflexive, then i.s=i for all instances i URI: linkml:reflexive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Comments: it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive Close Mappings: owl:ReflexiveProperty","title":"Slot: reflexive"},{"location":"reflexive/#slot-reflexive","text":"If s is reflexive, then i.s=i for all instances i URI: linkml:reflexive","title":"Slot: reflexive"},{"location":"reflexive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"reflexive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"reflexive/#children","text":"","title":"Children"},{"location":"reflexive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"reflexive/#other-properties","text":"Comments: it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive Close Mappings: owl:ReflexiveProperty","title":"Other properties"},{"location":"reflexive_transitive_form_of/","text":"Slot: reflexive_transitive_form_of transitive_form_of including the reflexive case URI: linkml:reflexive_transitive_form_of Domain and Range None \u2192 0..1 SlotDefinition Parents is_a: transitive_form_of Children Used by SlotDefinition","title":"Slot: reflexive_transitive_form_of"},{"location":"reflexive_transitive_form_of/#slot-reflexive_transitive_form_of","text":"transitive_form_of including the reflexive case URI: linkml:reflexive_transitive_form_of","title":"Slot: reflexive_transitive_form_of"},{"location":"reflexive_transitive_form_of/#domain-and-range","text":"None \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"reflexive_transitive_form_of/#parents","text":"is_a: transitive_form_of","title":"Parents"},{"location":"reflexive_transitive_form_of/#children","text":"","title":"Children"},{"location":"reflexive_transitive_form_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"related_mappings/","text":"Slot: related mappings A list of terms from different schemas or terminology systems that have related meaning. URI: linkml:related_mappings Domain and Range None \u2192 0..* Uriorcurie Parents is_a: mappings Children Used by ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition Other properties Mappings: skos:relatedMatch","title":"Slot: related mappings"},{"location":"related_mappings/#slot-related-mappings","text":"A list of terms from different schemas or terminology systems that have related meaning. URI: linkml:related_mappings","title":"Slot: related mappings"},{"location":"related_mappings/#domain-and-range","text":"None \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"related_mappings/#parents","text":"is_a: mappings","title":"Parents"},{"location":"related_mappings/#children","text":"","title":"Children"},{"location":"related_mappings/#used-by","text":"ClassDefinition Definition Element EnumDefinition SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition","title":"Used by"},{"location":"related_mappings/#other-properties","text":"Mappings: skos:relatedMatch","title":"Other properties"},{"location":"relational_logical_characteristic/","text":"Slot: relational_logical_characteristic A property of a slot that pertains to its logical properties URI: linkml:relational_logical_characteristic Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children asymmetric irreflexive locally_reflexive reflexive symmetric transitive Used by","title":"Slot: relational_logical_characteristic"},{"location":"relational_logical_characteristic/#slot-relational_logical_characteristic","text":"A property of a slot that pertains to its logical properties URI: linkml:relational_logical_characteristic","title":"Slot: relational_logical_characteristic"},{"location":"relational_logical_characteristic/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"relational_logical_characteristic/#parents","text":"","title":"Parents"},{"location":"relational_logical_characteristic/#children","text":"asymmetric irreflexive locally_reflexive reflexive symmetric transitive","title":"Children"},{"location":"relational_logical_characteristic/#used-by","text":"","title":"Used by"},{"location":"relational_role/","text":"Slot: relational_role the role a slot on a relationship class plays, for example, the subject, object or predicate roles URI: linkml:relational_role Domain and Range SlotDefinition \u2192 0..1 relational_role_enum Parents Children Used by SlotDefinition Other properties Aliases: reification_role Comments: this should only be used on slots that are applicable to class that represent relationships in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes","title":"Slot: relational_role"},{"location":"relational_role/#slot-relational_role","text":"the role a slot on a relationship class plays, for example, the subject, object or predicate roles URI: linkml:relational_role","title":"Slot: relational_role"},{"location":"relational_role/#domain-and-range","text":"SlotDefinition \u2192 0..1 relational_role_enum","title":"Domain and Range"},{"location":"relational_role/#parents","text":"","title":"Parents"},{"location":"relational_role/#children","text":"","title":"Children"},{"location":"relational_role/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"relational_role/#other-properties","text":"Aliases: reification_role Comments: this should only be used on slots that are applicable to class that represent relationships in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes","title":"Other properties"},{"location":"relational_role_enum/","text":"Enum: relational_role_enum enumeration of roles a slot on a relationship class can play URI: linkml:relational_role_enum Other properties Permissible Values Text Description Meaning Other Information SUBJECT a slot with this role connects a relationship to its subject/source node rdf:subject OBJECT a slot with this role connects a relationship to its object/target node rdf:object PREDICATE a slot with this role connects a relationship to its predicate/property rdf:predicate NODE a slot with this role connects a symmetric relationship to a node that represents either subject or object node OTHER_ROLE a slot with this role connects a relationship to a node that is not subject/object/predicate","title":"Enum: relational_role_enum"},{"location":"relational_role_enum/#enum-relational_role_enum","text":"enumeration of roles a slot on a relationship class can play URI: linkml:relational_role_enum","title":"Enum: relational_role_enum"},{"location":"relational_role_enum/#other-properties","text":"","title":"Other properties"},{"location":"relational_role_enum/#permissible-values","text":"Text Description Meaning Other Information SUBJECT a slot with this role connects a relationship to its subject/source node rdf:subject OBJECT a slot with this role connects a relationship to its object/target node rdf:object PREDICATE a slot with this role connects a relationship to its predicate/property rdf:predicate NODE a slot with this role connects a symmetric relationship to a node that represents either subject or object node OTHER_ROLE a slot with this role connects a relationship to a node that is not subject/object/predicate","title":"Permissible Values"},{"location":"repr/","text":"Slot: repr the name of the python object that implements this type definition URI: linkml:repr Domain and Range TypeDefinition \u2192 0..1 String Parents Children Used by TypeDefinition","title":"Slot: repr"},{"location":"repr/#slot-repr","text":"the name of the python object that implements this type definition URI: linkml:repr","title":"Slot: repr"},{"location":"repr/#domain-and-range","text":"TypeDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"repr/#parents","text":"","title":"Parents"},{"location":"repr/#children","text":"","title":"Children"},{"location":"repr/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"represents_relationship/","text":"Slot: represents_relationship true if this class represents a relationship rather than an entity URI: linkml:represents_relationship Domain and Range ClassDefinition \u2192 0..1 Boolean Parents Children Used by ClassDefinition Other properties Aliases: is_reified Comments: in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond in the context of RDF, this should be used when instances of the class are rdf:Statement s in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes See also: rdf:Statement https://patterns.dataincubator.org/book/qualified-relation.html","title":"Slot: represents_relationship"},{"location":"represents_relationship/#slot-represents_relationship","text":"true if this class represents a relationship rather than an entity URI: linkml:represents_relationship","title":"Slot: represents_relationship"},{"location":"represents_relationship/#domain-and-range","text":"ClassDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"represents_relationship/#parents","text":"","title":"Parents"},{"location":"represents_relationship/#children","text":"","title":"Children"},{"location":"represents_relationship/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"represents_relationship/#other-properties","text":"Aliases: is_reified Comments: in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond in the context of RDF, this should be used when instances of the class are rdf:Statement s in the context of property graphs, this should be used when a class is used to represent an edge that connects nodes See also: rdf:Statement https://patterns.dataincubator.org/book/qualified-relation.html","title":"Other properties"},{"location":"required/","text":"Slot: required true means that the slot must be present in the loaded definition URI: linkml:required Domain and Range SlotDefinition \u2192 0..1 Boolean Parents Children Used by AnonymousSlotExpression SlotDefinition SlotExpression","title":"Slot: required"},{"location":"required/#slot-required","text":"true means that the slot must be present in the loaded definition URI: linkml:required","title":"Slot: required"},{"location":"required/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"required/#parents","text":"","title":"Parents"},{"location":"required/#children","text":"","title":"Children"},{"location":"required/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"reversed/","text":"Slot: reversed true if the slot is to be inversed URI: linkml:reversed Domain and Range None \u2192 0..1 Boolean Parents Children Used by PathExpression","title":"Slot: reversed"},{"location":"reversed/#slot-reversed","text":"true if the slot is to be inversed URI: linkml:reversed","title":"Slot: reversed"},{"location":"reversed/#domain-and-range","text":"None \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"reversed/#parents","text":"","title":"Parents"},{"location":"reversed/#children","text":"","title":"Children"},{"location":"reversed/#used-by","text":"PathExpression","title":"Used by"},{"location":"role/","text":"Slot: role the role played by the slot range URI: linkml:role Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition","title":"Slot: role"},{"location":"role/#slot-role","text":"the role played by the slot range URI: linkml:role","title":"Slot: role"},{"location":"role/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"role/#parents","text":"","title":"Parents"},{"location":"role/#children","text":"","title":"Children"},{"location":"role/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"rules/","text":"Slot: rules the collection of rules that apply to all members of this class URI: linkml:rules Domain and Range ClassDefinition \u2192 0..* ClassRule Parents Children class_definition\u279erules Used by Other properties Mappings: sh:rule","title":"Slot: rules"},{"location":"rules/#slot-rules","text":"the collection of rules that apply to all members of this class URI: linkml:rules","title":"Slot: rules"},{"location":"rules/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassRule","title":"Domain and Range"},{"location":"rules/#parents","text":"","title":"Parents"},{"location":"rules/#children","text":"class_definition\u279erules","title":"Children"},{"location":"rules/#used-by","text":"","title":"Used by"},{"location":"rules/#other-properties","text":"Mappings: sh:rule","title":"Other properties"},{"location":"schema_definition_name/","text":"Slot: name the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:schema_definition_name Domain and Range SchemaDefinition \u2192 1..1 Ncname Parents is_a: name Children Used by SchemaDefinition Other properties Aliases: short name unique name Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Slot: name"},{"location":"schema_definition_name/#slot-name","text":"the unique name of the element within the context of the schema. Name is combined with the default prefix to form the globally unique subject of the target class. URI: linkml:schema_definition_name","title":"Slot: name"},{"location":"schema_definition_name/#domain-and-range","text":"SchemaDefinition \u2192 1..1 Ncname","title":"Domain and Range"},{"location":"schema_definition_name/#parents","text":"is_a: name","title":"Parents"},{"location":"schema_definition_name/#children","text":"","title":"Children"},{"location":"schema_definition_name/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"schema_definition_name/#other-properties","text":"Aliases: short name unique name Mappings: rdfs:label In Subsets: owl See also: https://en.wikipedia.org/wiki/Data_element_name Exact Mappings: schema:name","title":"Other properties"},{"location":"see_also/","text":"Slot: see_also a reference URI: linkml:see_also Domain and Range Element \u2192 0..* Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Mappings: rdfs:seeAlso In Subsets: owl","title":"Slot: see_also"},{"location":"see_also/#slot-see_also","text":"a reference URI: linkml:see_also","title":"Slot: see_also"},{"location":"see_also/#domain-and-range","text":"Element \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"see_also/#parents","text":"","title":"Parents"},{"location":"see_also/#children","text":"","title":"Children"},{"location":"see_also/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"see_also/#other-properties","text":"Mappings: rdfs:seeAlso In Subsets: owl","title":"Other properties"},{"location":"singular_name/","text":"Slot: singular_name a name that is used in the singular form URI: linkml:singular_name Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition Other properties Mappings: skos:altLabel","title":"Slot: singular_name"},{"location":"singular_name/#slot-singular_name","text":"a name that is used in the singular form URI: linkml:singular_name","title":"Slot: singular_name"},{"location":"singular_name/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"singular_name/#parents","text":"","title":"Parents"},{"location":"singular_name/#children","text":"","title":"Children"},{"location":"singular_name/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"singular_name/#other-properties","text":"Mappings: skos:altLabel","title":"Other properties"},{"location":"slot_conditions/","text":"Slot: slot_conditions the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_conditions Domain and Range None \u2192 0..* SlotDefinition Parents Children Used by AnonymousClassExpression ClassDefinition ClassExpression","title":"Slot: slot_conditions"},{"location":"slot_conditions/#slot-slot_conditions","text":"the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_conditions","title":"Slot: slot_conditions"},{"location":"slot_conditions/#domain-and-range","text":"None \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_conditions/#parents","text":"","title":"Parents"},{"location":"slot_conditions/#children","text":"","title":"Children"},{"location":"slot_conditions/#used-by","text":"AnonymousClassExpression ClassDefinition ClassExpression","title":"Used by"},{"location":"slot_definition_apply_to/","text":"Slot: apply_to Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:slot_definition_apply_to Domain and Range SlotDefinition \u2192 0..* SlotDefinition Parents is_a: apply_to Children Used by SlotDefinition","title":"Slot: apply_to"},{"location":"slot_definition_apply_to/#slot-apply_to","text":"Used to extend class or slot definitions. For example, if we have a core schema where a gene has two slots for identifier and symbol, and we have a specialized schema for my_organism where we wish to add a slot systematic_name, we can avoid subclassing by defining a class gene_my_organism, adding the slot to this class, and then adding an apply_to pointing to the gene class. The new slot will be 'injected into' the gene class. URI: linkml:slot_definition_apply_to","title":"Slot: apply_to"},{"location":"slot_definition_apply_to/#domain-and-range","text":"SlotDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_apply_to/#parents","text":"is_a: apply_to","title":"Parents"},{"location":"slot_definition_apply_to/#children","text":"","title":"Children"},{"location":"slot_definition_apply_to/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_disjoint_with/","text":"Slot: disjoint_with Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances URI: linkml:slot_definition_disjoint_with Domain and Range SlotDefinition \u2192 0..* SlotDefinition Parents is_a: disjoint_with Children Used by SlotDefinition","title":"Slot: disjoint_with"},{"location":"slot_definition_disjoint_with/#slot-disjoint_with","text":"Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances URI: linkml:slot_definition_disjoint_with","title":"Slot: disjoint_with"},{"location":"slot_definition_disjoint_with/#domain-and-range","text":"SlotDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_disjoint_with/#parents","text":"is_a: disjoint_with","title":"Parents"},{"location":"slot_definition_disjoint_with/#children","text":"","title":"Children"},{"location":"slot_definition_disjoint_with/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_is_a/","text":"Slot: is_a specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:slot_definition_is_a Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents is_a: is_a Children Used by SlotDefinition","title":"Slot: is_a"},{"location":"slot_definition_is_a/#slot-is_a","text":"specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded URI: linkml:slot_definition_is_a","title":"Slot: is_a"},{"location":"slot_definition_is_a/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_is_a/#parents","text":"is_a: is_a","title":"Parents"},{"location":"slot_definition_is_a/#children","text":"","title":"Children"},{"location":"slot_definition_is_a/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_mixins/","text":"Slot: mixins List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:slot_definition_mixins Domain and Range SlotDefinition \u2192 0..* SlotDefinition Parents is_a: mixins Children Used by SlotDefinition Other properties Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Slot: mixins"},{"location":"slot_definition_mixins/#slot-mixins","text":"List of definitions to be mixed in. Targets may be any definition of the same type URI: linkml:slot_definition_mixins","title":"Slot: mixins"},{"location":"slot_definition_mixins/#domain-and-range","text":"SlotDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definition_mixins/#parents","text":"is_a: mixins","title":"Parents"},{"location":"slot_definition_mixins/#children","text":"","title":"Children"},{"location":"slot_definition_mixins/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_definition_mixins/#other-properties","text":"Aliases: traits Comments: mixins act in the same way as parents (is_a). They allow a model to have a primary strict hierachy, while keeping the benefits of multiple inheritance See also: https://en.wikipedia.org/wiki/Mixin","title":"Other properties"},{"location":"slot_definitions/","text":"Slot: slots slot definitions URI: linkml:slot_definitions Domain and Range SchemaDefinition \u2192 0..* SlotDefinition Parents Children Used by SchemaDefinition","title":"Slot: slots"},{"location":"slot_definitions/#slot-slots","text":"slot definitions URI: linkml:slot_definitions","title":"Slot: slots"},{"location":"slot_definitions/#domain-and-range","text":"SchemaDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_definitions/#parents","text":"","title":"Parents"},{"location":"slot_definitions/#children","text":"","title":"Children"},{"location":"slot_definitions/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"slot_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:slot_expression_all_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: all_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"slot_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:slot_expression_all_of","title":"Slot: all_of"},{"location":"slot_expression_all_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"slot_expression_all_of/#children","text":"","title":"Children"},{"location":"slot_expression_all_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"slot_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:slot_expression_any_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: any_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"slot_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:slot_expression_any_of","title":"Slot: any_of"},{"location":"slot_expression_any_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"slot_expression_any_of/#children","text":"","title":"Children"},{"location":"slot_expression_any_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"slot_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:slot_expression_exactly_one_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: exactly_one_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"slot_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:slot_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"slot_expression_exactly_one_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"slot_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"slot_expression_exactly_one_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"slot_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:slot_expression_none_of Domain and Range SlotExpression \u2192 0..* AnonymousSlotExpression Parents is_a: none_of Children Used by AnonymousSlotExpression SlotDefinition SlotExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"slot_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:slot_expression_none_of","title":"Slot: none_of"},{"location":"slot_expression_none_of/#domain-and-range","text":"SlotExpression \u2192 0..* AnonymousSlotExpression","title":"Domain and Range"},{"location":"slot_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"slot_expression_none_of/#children","text":"","title":"Children"},{"location":"slot_expression_none_of/#used-by","text":"AnonymousSlotExpression SlotDefinition SlotExpression","title":"Used by"},{"location":"slot_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"slot_group/","text":"Slot: slot_group allows for grouping of related slots into a grouping slot that serves the role of a group URI: linkml:slot_group Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents Children Used by SlotDefinition Other properties Mappings: sh:group","title":"Slot: slot_group"},{"location":"slot_group/#slot-slot_group","text":"allows for grouping of related slots into a grouping slot that serves the role of a group URI: linkml:slot_group","title":"Slot: slot_group"},{"location":"slot_group/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"slot_group/#parents","text":"","title":"Parents"},{"location":"slot_group/#children","text":"","title":"Children"},{"location":"slot_group/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_group/#other-properties","text":"Mappings: sh:group","title":"Other properties"},{"location":"slot_names_unique/","text":"Slot: slot_names_unique if true then induced/mangled slot names are not created for class_usage and attributes URI: linkml:slot_names_unique Domain and Range Definition \u2192 0..1 Boolean Parents Children Used by ClassDefinition SchemaDefinition","title":"Slot: slot_names_unique"},{"location":"slot_names_unique/#slot-slot_names_unique","text":"if true then induced/mangled slot names are not created for class_usage and attributes URI: linkml:slot_names_unique","title":"Slot: slot_names_unique"},{"location":"slot_names_unique/#domain-and-range","text":"Definition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"slot_names_unique/#parents","text":"","title":"Parents"},{"location":"slot_names_unique/#children","text":"","title":"Children"},{"location":"slot_names_unique/#used-by","text":"ClassDefinition SchemaDefinition","title":"Used by"},{"location":"slot_uri/","text":"Slot: slot_uri predicate of this slot for semantic web application URI: linkml:slot_uri Domain and Range SlotDefinition \u2192 0..1 Uriorcurie Parents Children Used by SlotDefinition Other properties Aliases: public ID","title":"Slot: slot_uri"},{"location":"slot_uri/#slot-slot_uri","text":"predicate of this slot for semantic web application URI: linkml:slot_uri","title":"Slot: slot_uri"},{"location":"slot_uri/#domain-and-range","text":"SlotDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"slot_uri/#parents","text":"","title":"Parents"},{"location":"slot_uri/#children","text":"","title":"Children"},{"location":"slot_uri/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"slot_uri/#other-properties","text":"Aliases: public ID","title":"Other properties"},{"location":"slot_usage/","text":"Slot: slot_usage the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_usage Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition Other properties Comments: Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints","title":"Slot: slot_usage"},{"location":"slot_usage/#slot-slot_usage","text":"the redefinition of a slot in the context of the containing class definition. URI: linkml:slot_usage","title":"Slot: slot_usage"},{"location":"slot_usage/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slot_usage/#parents","text":"","title":"Parents"},{"location":"slot_usage/#children","text":"","title":"Children"},{"location":"slot_usage/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"slot_usage/#other-properties","text":"Comments: Many slots may be re-used across different classes, but the meaning of the slot may be refined by context. For example, a generic association model may use slots subject/predicate/object with generic semantics and minimal constraints. When this is subclasses, e.g. to disease-phenotype associations then slot usage may specify both local naming (e.g. subject=disease) and local constraints","title":"Other properties"},{"location":"slots/","text":"Slot: slots list of slot names that are applicable to a class URI: linkml:slots Domain and Range ClassDefinition \u2192 0..* SlotDefinition Parents Children Used by ClassDefinition Other properties Comments: This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries. Formally,","title":"Slot: slots"},{"location":"slots/#slot-slots","text":"list of slot names that are applicable to a class URI: linkml:slots","title":"Slot: slots"},{"location":"slots/#domain-and-range","text":"ClassDefinition \u2192 0..* SlotDefinition","title":"Domain and Range"},{"location":"slots/#parents","text":"","title":"Parents"},{"location":"slots/#children","text":"","title":"Children"},{"location":"slots/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"slots/#other-properties","text":"Comments: This defines the set of slots that are allowed to be used for a given class. The final list of slots for a class is the combination of the parent (is a) slots, mixins slots, apply to slots minus the slot usage entries. Formally,","title":"Other properties"},{"location":"source/","text":"Slot: source A related resource from which the element is derived. URI: linkml:source Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Aliases: origin derived from Mappings: dcterms:source Comments: The described resource may be derived from the related resource in whole or in part Close Mappings: prov:wasDerivedFrom schema:isBasedOn","title":"Slot: source"},{"location":"source/#slot-source","text":"A related resource from which the element is derived. URI: linkml:source","title":"Slot: source"},{"location":"source/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"source/#parents","text":"","title":"Parents"},{"location":"source/#children","text":"","title":"Children"},{"location":"source/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"source/#other-properties","text":"Aliases: origin derived from Mappings: dcterms:source Comments: The described resource may be derived from the related resource in whole or in part Close Mappings: prov:wasDerivedFrom schema:isBasedOn","title":"Other properties"},{"location":"source_file/","text":"Slot: source_file name, uri or description of the source of the schema URI: linkml:source_file Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: source_file"},{"location":"source_file/#slot-source_file","text":"name, uri or description of the source of the schema URI: linkml:source_file","title":"Slot: source_file"},{"location":"source_file/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"source_file/#parents","text":"","title":"Parents"},{"location":"source_file/#children","text":"","title":"Children"},{"location":"source_file/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"source_file/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"source_file_date/","text":"Slot: source_file_date modification date of the source of the schema URI: linkml:source_file_date Domain and Range SchemaDefinition \u2192 0..1 Datetime Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: source_file_date"},{"location":"source_file_date/#slot-source_file_date","text":"modification date of the source of the schema URI: linkml:source_file_date","title":"Slot: source_file_date"},{"location":"source_file_date/#domain-and-range","text":"SchemaDefinition \u2192 0..1 Datetime","title":"Domain and Range"},{"location":"source_file_date/#parents","text":"","title":"Parents"},{"location":"source_file_date/#children","text":"","title":"Children"},{"location":"source_file_date/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"source_file_date/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"source_file_size/","text":"Slot: source_file_size size in bytes of the source of the schema URI: linkml:source_file_size Domain and Range SchemaDefinition \u2192 0..1 Integer Parents Children Used by SchemaDefinition Other properties In Subsets: owl","title":"Slot: source_file_size"},{"location":"source_file_size/#slot-source_file_size","text":"size in bytes of the source of the schema URI: linkml:source_file_size","title":"Slot: source_file_size"},{"location":"source_file_size/#domain-and-range","text":"SchemaDefinition \u2192 0..1 Integer","title":"Domain and Range"},{"location":"source_file_size/#parents","text":"","title":"Parents"},{"location":"source_file_size/#children","text":"","title":"Children"},{"location":"source_file_size/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"source_file_size/#other-properties","text":"In Subsets: owl","title":"Other properties"},{"location":"status/","text":"Slot: status status of the element URI: linkml:status Domain and Range Element \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition Other properties Aliases: workflow status Mappings: bibo:status Examples: Example(value='bibo:draft', description=None)","title":"Slot: status"},{"location":"status/#slot-status","text":"status of the element URI: linkml:status","title":"Slot: status"},{"location":"status/#domain-and-range","text":"Element \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"status/#parents","text":"","title":"Parents"},{"location":"status/#children","text":"","title":"Children"},{"location":"status/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"status/#other-properties","text":"Aliases: workflow status Mappings: bibo:status Examples: Example(value='bibo:draft', description=None)","title":"Other properties"},{"location":"string_serialization/","text":"Slot: string_serialization Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm URI: linkml:string_serialization Domain and Range Definition \u2192 0..1 String Parents Children Used by ClassDefinition Definition SlotDefinition Other properties See also: https://github.com/linkml/issues/128","title":"Slot: string_serialization"},{"location":"string_serialization/#slot-string_serialization","text":"Used on a slot that stores the string serialization of the containing object. The syntax follows python formatted strings, with slot names enclosed in {}s. These are expanded using the values of those slots. We call the slot with the serialization the s-slot, the slots used in the {}s are v-slots. If both s-slots and v-slots are populated on an object then the value of the s-slot should correspond to the expansion. Implementations of frameworks may choose to use this property to either (a) PARSE: implement automated normalizations by parsing denormalized strings into complex objects (b) GENERARE: implement automated to_string labeling of complex objects For example, a Measurement class may have 3 fields: unit, value, and string_value. The string_value slot may have a string_serialization of {value}{unit} such that if unit=cm and value=2, the value of string_value shouldd be 2cm URI: linkml:string_serialization","title":"Slot: string_serialization"},{"location":"string_serialization/#domain-and-range","text":"Definition \u2192 0..1 String","title":"Domain and Range"},{"location":"string_serialization/#parents","text":"","title":"Parents"},{"location":"string_serialization/#children","text":"","title":"Children"},{"location":"string_serialization/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"string_serialization/#other-properties","text":"See also: https://github.com/linkml/issues/128","title":"Other properties"},{"location":"subclass_of/","text":"Slot: subclass_of rdfs:subClassOf to be emitted in OWL generation URI: linkml:subclass_of Domain and Range ClassDefinition \u2192 0..1 Uriorcurie Parents Children Used by ClassDefinition Other properties Mappings: rdfs:subClassOf","title":"Slot: subclass_of"},{"location":"subclass_of/#slot-subclass_of","text":"rdfs:subClassOf to be emitted in OWL generation URI: linkml:subclass_of","title":"Slot: subclass_of"},{"location":"subclass_of/#domain-and-range","text":"ClassDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"subclass_of/#parents","text":"","title":"Parents"},{"location":"subclass_of/#children","text":"","title":"Children"},{"location":"subclass_of/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"subclass_of/#other-properties","text":"Mappings: rdfs:subClassOf","title":"Other properties"},{"location":"subproperty_of/","text":"Slot: subproperty_of Ontology property which this slot is a subproperty of URI: linkml:subproperty_of Domain and Range SlotDefinition \u2192 0..1 SlotDefinition Parents Children Used by SlotDefinition Other properties Mappings: rdfs:subPropertyOf","title":"Slot: subproperty_of"},{"location":"subproperty_of/#slot-subproperty_of","text":"Ontology property which this slot is a subproperty of URI: linkml:subproperty_of","title":"Slot: subproperty_of"},{"location":"subproperty_of/#domain-and-range","text":"SlotDefinition \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"subproperty_of/#parents","text":"","title":"Parents"},{"location":"subproperty_of/#children","text":"","title":"Children"},{"location":"subproperty_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"subproperty_of/#other-properties","text":"Mappings: rdfs:subPropertyOf","title":"Other properties"},{"location":"subsets/","text":"Slot: subsets list of subsets referenced in this model URI: linkml:subsets Domain and Range SchemaDefinition \u2192 0..* SubsetDefinition Parents Children Used by SchemaDefinition","title":"Slot: subsets"},{"location":"subsets/#slot-subsets","text":"list of subsets referenced in this model URI: linkml:subsets","title":"Slot: subsets"},{"location":"subsets/#domain-and-range","text":"SchemaDefinition \u2192 0..* SubsetDefinition","title":"Domain and Range"},{"location":"subsets/#parents","text":"","title":"Parents"},{"location":"subsets/#children","text":"","title":"Children"},{"location":"subsets/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"symmetric/","text":"Slot: symmetric If s is symmetric, and i.s=v, then v.s=i URI: linkml:symmetric Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Close Mappings: owl:SymmetricProperty","title":"Slot: symmetric"},{"location":"symmetric/#slot-symmetric","text":"If s is symmetric, and i.s=v, then v.s=i URI: linkml:symmetric","title":"Slot: symmetric"},{"location":"symmetric/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"symmetric/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"symmetric/#children","text":"","title":"Children"},{"location":"symmetric/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"symmetric/#other-properties","text":"Close Mappings: owl:SymmetricProperty","title":"Other properties"},{"location":"text/","text":"Slot: text URI: linkml:text Domain and Range PermissibleValue \u2192 1..1 String Parents Children Used by PermissibleValue Other properties Aliases: value","title":"Slot: text"},{"location":"text/#slot-text","text":"URI: linkml:text","title":"Slot: text"},{"location":"text/#domain-and-range","text":"PermissibleValue \u2192 1..1 String","title":"Domain and Range"},{"location":"text/#parents","text":"","title":"Parents"},{"location":"text/#children","text":"","title":"Children"},{"location":"text/#used-by","text":"PermissibleValue","title":"Used by"},{"location":"text/#other-properties","text":"Aliases: value","title":"Other properties"},{"location":"title/","text":"Slot: title the official title of the element URI: linkml:title Domain and Range Element \u2192 0..1 String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey Other properties Aliases: long name Mappings: dcterms:title In Subsets: owl","title":"Slot: title"},{"location":"title/#slot-title","text":"the official title of the element URI: linkml:title","title":"Slot: title"},{"location":"title/#domain-and-range","text":"Element \u2192 0..1 String","title":"Domain and Range"},{"location":"title/#parents","text":"","title":"Parents"},{"location":"title/#children","text":"","title":"Children"},{"location":"title/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"title/#other-properties","text":"Aliases: long name Mappings: dcterms:title In Subsets: owl","title":"Other properties"},{"location":"todos/","text":"Slot: todos Outstanding issue that needs resolution URI: linkml:todos Domain and Range Element \u2192 0..* String Parents Children Used by AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Slot: todos"},{"location":"todos/#slot-todos","text":"Outstanding issue that needs resolution URI: linkml:todos","title":"Slot: todos"},{"location":"todos/#domain-and-range","text":"Element \u2192 0..* String","title":"Domain and Range"},{"location":"todos/#parents","text":"","title":"Parents"},{"location":"todos/#children","text":"","title":"Children"},{"location":"todos/#used-by","text":"AnonymousClassExpression AnonymousExpression AnonymousSlotExpression ClassDefinition ClassRule CommonMetadata Definition Element EnumDefinition PathExpression PermissibleValue SchemaDefinition SlotDefinition SubsetDefinition TypeDefinition UniqueKey","title":"Used by"},{"location":"transitive/","text":"Slot: transitive If s is transitive, and i.s=z, and s.s=j, then i.s=j URI: linkml:transitive Domain and Range SlotDefinition \u2192 0..1 Boolean Parents is_a: relational_logical_characteristic Children Used by SlotDefinition Other properties Close Mappings: owl:TransitiveProperty","title":"Slot: transitive"},{"location":"transitive/#slot-transitive","text":"If s is transitive, and i.s=z, and s.s=j, then i.s=j URI: linkml:transitive","title":"Slot: transitive"},{"location":"transitive/#domain-and-range","text":"SlotDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"transitive/#parents","text":"is_a: relational_logical_characteristic","title":"Parents"},{"location":"transitive/#children","text":"","title":"Children"},{"location":"transitive/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"transitive/#other-properties","text":"Close Mappings: owl:TransitiveProperty","title":"Other properties"},{"location":"transitive_form_of/","text":"Slot: transitive_form_of If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive URI: linkml:transitive_form_of Domain and Range None \u2192 0..1 SlotDefinition Parents Children reflexive_transitive_form_of Used by SlotDefinition Other properties Comments: {'Example': 'ancestor_of is the transitive_form_of parent_of'}","title":"Slot: transitive_form_of"},{"location":"transitive_form_of/#slot-transitive_form_of","text":"If s transitive_form_of d, then (1) s holds whenever d holds (2) s is transitive (3) d holds whenever s holds and there are no intermediates, and s is not reflexive URI: linkml:transitive_form_of","title":"Slot: transitive_form_of"},{"location":"transitive_form_of/#domain-and-range","text":"None \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"transitive_form_of/#parents","text":"","title":"Parents"},{"location":"transitive_form_of/#children","text":"reflexive_transitive_form_of","title":"Children"},{"location":"transitive_form_of/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"transitive_form_of/#other-properties","text":"Comments: {'Example': 'ancestor_of is the transitive_form_of parent_of'}","title":"Other properties"},{"location":"traverse/","text":"Slot: traverse the slot to traverse URI: linkml:traverse Domain and Range None \u2192 0..1 SlotDefinition Parents Children Used by PathExpression","title":"Slot: traverse"},{"location":"traverse/#slot-traverse","text":"the slot to traverse URI: linkml:traverse","title":"Slot: traverse"},{"location":"traverse/#domain-and-range","text":"None \u2192 0..1 SlotDefinition","title":"Domain and Range"},{"location":"traverse/#parents","text":"","title":"Parents"},{"location":"traverse/#children","text":"","title":"Children"},{"location":"traverse/#used-by","text":"PathExpression","title":"Used by"},{"location":"tree_root/","text":"Slot: tree_root indicator that this is the root class in tree structures URI: linkml:tree_root Domain and Range ClassDefinition \u2192 0..1 Boolean Parents Children Used by ClassDefinition","title":"Slot: tree_root"},{"location":"tree_root/#slot-tree_root","text":"indicator that this is the root class in tree structures URI: linkml:tree_root","title":"Slot: tree_root"},{"location":"tree_root/#domain-and-range","text":"ClassDefinition \u2192 0..1 Boolean","title":"Domain and Range"},{"location":"tree_root/#parents","text":"","title":"Parents"},{"location":"tree_root/#children","text":"","title":"Children"},{"location":"tree_root/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"type_expression_all_of/","text":"Slot: all_of holds if all of the expressions hold URI: linkml:type_expression_all_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: all_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:and","title":"Slot: all_of"},{"location":"type_expression_all_of/#slot-all_of","text":"holds if all of the expressions hold URI: linkml:type_expression_all_of","title":"Slot: all_of"},{"location":"type_expression_all_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_all_of/#parents","text":"is_a: all_of","title":"Parents"},{"location":"type_expression_all_of/#children","text":"","title":"Children"},{"location":"type_expression_all_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_all_of/#other-properties","text":"Exact Mappings: sh:and","title":"Other properties"},{"location":"type_expression_any_of/","text":"Slot: any_of holds if at least one of the expressions hold URI: linkml:type_expression_any_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: any_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:or","title":"Slot: any_of"},{"location":"type_expression_any_of/#slot-any_of","text":"holds if at least one of the expressions hold URI: linkml:type_expression_any_of","title":"Slot: any_of"},{"location":"type_expression_any_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_any_of/#parents","text":"is_a: any_of","title":"Parents"},{"location":"type_expression_any_of/#children","text":"","title":"Children"},{"location":"type_expression_any_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_any_of/#other-properties","text":"Exact Mappings: sh:or","title":"Other properties"},{"location":"type_expression_exactly_one_of/","text":"Slot: exactly_one_of holds if only one of the expressions hold URI: linkml:type_expression_exactly_one_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: exactly_one_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:xone","title":"Slot: exactly_one_of"},{"location":"type_expression_exactly_one_of/#slot-exactly_one_of","text":"holds if only one of the expressions hold URI: linkml:type_expression_exactly_one_of","title":"Slot: exactly_one_of"},{"location":"type_expression_exactly_one_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_exactly_one_of/#parents","text":"is_a: exactly_one_of","title":"Parents"},{"location":"type_expression_exactly_one_of/#children","text":"","title":"Children"},{"location":"type_expression_exactly_one_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_exactly_one_of/#other-properties","text":"Exact Mappings: sh:xone","title":"Other properties"},{"location":"type_expression_none_of/","text":"Slot: none_of holds if none of the expressions hold URI: linkml:type_expression_none_of Domain and Range TypeExpression \u2192 0..* AnonymousTypeExpression Parents is_a: none_of Children Used by AnonymousTypeExpression TypeDefinition TypeExpression Other properties Exact Mappings: sh:not","title":"Slot: none_of"},{"location":"type_expression_none_of/#slot-none_of","text":"holds if none of the expressions hold URI: linkml:type_expression_none_of","title":"Slot: none_of"},{"location":"type_expression_none_of/#domain-and-range","text":"TypeExpression \u2192 0..* AnonymousTypeExpression","title":"Domain and Range"},{"location":"type_expression_none_of/#parents","text":"is_a: none_of","title":"Parents"},{"location":"type_expression_none_of/#children","text":"","title":"Children"},{"location":"type_expression_none_of/#used-by","text":"AnonymousTypeExpression TypeDefinition TypeExpression","title":"Used by"},{"location":"type_expression_none_of/#other-properties","text":"Exact Mappings: sh:not","title":"Other properties"},{"location":"type_uri/","text":"Slot: uri The uri that defines the possible values for the type definition URI: linkml:type_uri Domain and Range TypeDefinition \u2192 0..1 Uriorcurie Parents Children Used by TypeDefinition Other properties Comments: uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps) every root type must have a type uri","title":"Slot: uri"},{"location":"type_uri/#slot-uri","text":"The uri that defines the possible values for the type definition URI: linkml:type_uri","title":"Slot: uri"},{"location":"type_uri/#domain-and-range","text":"TypeDefinition \u2192 0..1 Uriorcurie","title":"Domain and Range"},{"location":"type_uri/#parents","text":"","title":"Parents"},{"location":"type_uri/#children","text":"","title":"Children"},{"location":"type_uri/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"type_uri/#other-properties","text":"Comments: uri is typically drawn from the set of URI's defined in OWL (https://www.w3.org/TR/2012/REC-owl2-syntax-20121211/#Datatype_Maps) every root type must have a type uri","title":"Other properties"},{"location":"typeof/","text":"Slot: typeof Names a parent type URI: linkml:typeof Domain and Range TypeDefinition \u2192 0..1 TypeDefinition Parents Children Used by TypeDefinition Other properties Comments: the target type definition of the typeof slot is referred to as the \"parent type\" the type definition containing the typeof slot is referred to as the \"child type\" type definitions without a typeof slot are referred to as a \"root type\"","title":"Slot: typeof"},{"location":"typeof/#slot-typeof","text":"Names a parent type URI: linkml:typeof","title":"Slot: typeof"},{"location":"typeof/#domain-and-range","text":"TypeDefinition \u2192 0..1 TypeDefinition","title":"Domain and Range"},{"location":"typeof/#parents","text":"","title":"Parents"},{"location":"typeof/#children","text":"","title":"Children"},{"location":"typeof/#used-by","text":"TypeDefinition","title":"Used by"},{"location":"typeof/#other-properties","text":"Comments: the target type definition of the typeof slot is referred to as the \"parent type\" the type definition containing the typeof slot is referred to as the \"child type\" type definitions without a typeof slot are referred to as a \"root type\"","title":"Other properties"},{"location":"types/","text":"Slot: types data types used in the model URI: linkml:types Domain and Range SchemaDefinition \u2192 0..* TypeDefinition Parents Children Used by SchemaDefinition","title":"Slot: types"},{"location":"types/#slot-types","text":"data types used in the model URI: linkml:types","title":"Slot: types"},{"location":"types/#domain-and-range","text":"SchemaDefinition \u2192 0..* TypeDefinition","title":"Domain and Range"},{"location":"types/#parents","text":"","title":"Parents"},{"location":"types/#children","text":"","title":"Children"},{"location":"types/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"union_of/","text":"Slot: union_of indicates that the domain class consists exactly of the members of the classes in the range URI: linkml:union_of Domain and Range ClassDefinition \u2192 0..* ClassDefinition Parents Children Used by ClassDefinition","title":"Slot: union_of"},{"location":"union_of/#slot-union_of","text":"indicates that the domain class consists exactly of the members of the classes in the range URI: linkml:union_of","title":"Slot: union_of"},{"location":"union_of/#domain-and-range","text":"ClassDefinition \u2192 0..* ClassDefinition","title":"Domain and Range"},{"location":"union_of/#parents","text":"","title":"Parents"},{"location":"union_of/#children","text":"","title":"Children"},{"location":"union_of/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"unique_key_name/","text":"Slot: unique_key_name name of the unique key URI: linkml:unique_key_name Domain and Range UniqueKey \u2192 1..1 String Parents Children Used by UniqueKey","title":"Slot: unique_key_name"},{"location":"unique_key_name/#slot-unique_key_name","text":"name of the unique key URI: linkml:unique_key_name","title":"Slot: unique_key_name"},{"location":"unique_key_name/#domain-and-range","text":"UniqueKey \u2192 1..1 String","title":"Domain and Range"},{"location":"unique_key_name/#parents","text":"","title":"Parents"},{"location":"unique_key_name/#children","text":"","title":"Children"},{"location":"unique_key_name/#used-by","text":"UniqueKey","title":"Used by"},{"location":"unique_key_slots/","text":"Slot: unique_key_slots list of slot names that form a key URI: linkml:unique_key_slots Domain and Range UniqueKey \u2192 1..* SlotDefinition Parents Children Used by UniqueKey","title":"Slot: unique_key_slots"},{"location":"unique_key_slots/#slot-unique_key_slots","text":"list of slot names that form a key URI: linkml:unique_key_slots","title":"Slot: unique_key_slots"},{"location":"unique_key_slots/#domain-and-range","text":"UniqueKey \u2192 1..* SlotDefinition","title":"Domain and Range"},{"location":"unique_key_slots/#parents","text":"","title":"Parents"},{"location":"unique_key_slots/#children","text":"","title":"Children"},{"location":"unique_key_slots/#used-by","text":"UniqueKey","title":"Used by"},{"location":"unique_keys/","text":"Slot: unique_keys Set of unique keys for this slot URI: linkml:unique_keys Domain and Range ClassDefinition \u2192 0..* UniqueKey Parents Children Used by ClassDefinition Other properties Exact Mappings: owl:hasKey","title":"Slot: unique_keys"},{"location":"unique_keys/#slot-unique_keys","text":"Set of unique keys for this slot URI: linkml:unique_keys","title":"Slot: unique_keys"},{"location":"unique_keys/#domain-and-range","text":"ClassDefinition \u2192 0..* UniqueKey","title":"Domain and Range"},{"location":"unique_keys/#parents","text":"","title":"Parents"},{"location":"unique_keys/#children","text":"","title":"Children"},{"location":"unique_keys/#used-by","text":"ClassDefinition","title":"Used by"},{"location":"unique_keys/#other-properties","text":"Exact Mappings: owl:hasKey","title":"Other properties"},{"location":"usage_slot_name/","text":"Slot: usage_slot_name The name of the slot referenced in the slot_usage URI: linkml:usage_slot_name Domain and Range SlotDefinition \u2192 0..1 String Parents Children Used by SlotDefinition","title":"Slot: usage_slot_name"},{"location":"usage_slot_name/#slot-usage_slot_name","text":"The name of the slot referenced in the slot_usage URI: linkml:usage_slot_name","title":"Slot: usage_slot_name"},{"location":"usage_slot_name/#domain-and-range","text":"SlotDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"usage_slot_name/#parents","text":"","title":"Parents"},{"location":"usage_slot_name/#children","text":"","title":"Children"},{"location":"usage_slot_name/#used-by","text":"SlotDefinition","title":"Used by"},{"location":"value/","text":"Slot: value example value URI: linkml:value Domain and Range Example \u2192 0..1 String Parents Children Used by Example Other properties Mappings: skos:example","title":"Slot: value"},{"location":"value/#slot-value","text":"example value URI: linkml:value","title":"Slot: value"},{"location":"value/#domain-and-range","text":"Example \u2192 0..1 String","title":"Domain and Range"},{"location":"value/#parents","text":"","title":"Parents"},{"location":"value/#children","text":"","title":"Children"},{"location":"value/#used-by","text":"Example","title":"Used by"},{"location":"value/#other-properties","text":"Mappings: skos:example","title":"Other properties"},{"location":"value_description/","text":"Slot: description description of what the value is doing URI: linkml:value_description Domain and Range Example \u2192 0..1 String Parents Children Used by Example","title":"Slot: description"},{"location":"value_description/#slot-description","text":"description of what the value is doing URI: linkml:value_description","title":"Slot: description"},{"location":"value_description/#domain-and-range","text":"Example \u2192 0..1 String","title":"Domain and Range"},{"location":"value_description/#parents","text":"","title":"Parents"},{"location":"value_description/#children","text":"","title":"Children"},{"location":"value_description/#used-by","text":"Example","title":"Used by"},{"location":"value_presence/","text":"Slot: value_presence if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) URI: linkml:value_presence Domain and Range SlotDefinition \u2192 0..1 presence_enum Parents is_a: value_specification_constant Children Used by Other properties Comments: if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present","title":"Slot: value_presence"},{"location":"value_presence/#slot-value_presence","text":"if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty) URI: linkml:value_presence","title":"Slot: value_presence"},{"location":"value_presence/#domain-and-range","text":"SlotDefinition \u2192 0..1 presence_enum","title":"Domain and Range"},{"location":"value_presence/#parents","text":"is_a: value_specification_constant","title":"Parents"},{"location":"value_presence/#children","text":"","title":"Children"},{"location":"value_presence/#used-by","text":"","title":"Used by"},{"location":"value_presence/#other-properties","text":"Comments: if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present","title":"Other properties"},{"location":"value_specification_constant/","text":"Slot: value_specification_constant Grouping for metamodel slots that constrain the a slot value to equal a specified constant URI: linkml:value_specification_constant Domain and Range None \u2192 0..1 String Parents Children equals_expression equals_number equals_string maximum_cardinality minimum_cardinality value_presence Used by","title":"Slot: value_specification_constant"},{"location":"value_specification_constant/#slot-value_specification_constant","text":"Grouping for metamodel slots that constrain the a slot value to equal a specified constant URI: linkml:value_specification_constant","title":"Slot: value_specification_constant"},{"location":"value_specification_constant/#domain-and-range","text":"None \u2192 0..1 String","title":"Domain and Range"},{"location":"value_specification_constant/#parents","text":"","title":"Parents"},{"location":"value_specification_constant/#children","text":"equals_expression equals_number equals_string maximum_cardinality minimum_cardinality value_presence","title":"Children"},{"location":"value_specification_constant/#used-by","text":"","title":"Used by"},{"location":"values_from/","text":"Slot: values_from the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot URI: linkml:values_from Domain and Range Definition \u2192 0..* Uriorcurie Parents Children Used by ClassDefinition Definition SlotDefinition","title":"Slot: values_from"},{"location":"values_from/#slot-values_from","text":"the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot URI: linkml:values_from","title":"Slot: values_from"},{"location":"values_from/#domain-and-range","text":"Definition \u2192 0..* Uriorcurie","title":"Domain and Range"},{"location":"values_from/#parents","text":"","title":"Parents"},{"location":"values_from/#children","text":"","title":"Children"},{"location":"values_from/#used-by","text":"ClassDefinition Definition SlotDefinition","title":"Used by"},{"location":"version/","text":"Slot: version particular version of schema URI: linkml:version Domain and Range SchemaDefinition \u2192 0..1 String Parents Children Used by SchemaDefinition Other properties Mappings: pav:version In Subsets: owl Exact Mappings: schema:schemaVersion","title":"Slot: version"},{"location":"version/#slot-version","text":"particular version of schema URI: linkml:version","title":"Slot: version"},{"location":"version/#domain-and-range","text":"SchemaDefinition \u2192 0..1 String","title":"Domain and Range"},{"location":"version/#parents","text":"","title":"Parents"},{"location":"version/#children","text":"","title":"Children"},{"location":"version/#used-by","text":"SchemaDefinition","title":"Used by"},{"location":"version/#other-properties","text":"Mappings: pav:version In Subsets: owl Exact Mappings: schema:schemaVersion","title":"Other properties"}]}
\ No newline at end of file
diff --git a/docs/sitemap.xml b/docs/sitemap.xml
index b8d771f0..80c7a845 100644
--- a/docs/sitemap.xml
+++ b/docs/sitemap.xml
@@ -2,1212 +2,1242 @@
 <urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
     <url>
          <loc>None</loc>
-         <lastmod>2021-12-28</lastmod>
+         <lastmod>2022-01-22</lastmod>
+         <changefreq>daily</changefreq>
+    </url>
+    <url>
+         <loc>None</loc>
+         <lastmod>2022-01-22</lastmod>
+         <changefreq>daily</changefreq>
+    </url>
+    <url>
+         <loc>None</loc>
+         <lastmod>2022-01-22</lastmod>
+         <changefreq>daily</changefreq>
+    </url>
+    <url>
+         <loc>None</loc>
+         <lastmod>2022-01-22</lastmod>
+         <changefreq>daily</changefreq>
+    </url>
+    <url>
+         <loc>None</loc>
+         <lastmod>2022-01-22</lastmod>
+         <changefreq>daily</changefreq>
+    </url>
+    <url>
+         <loc>None</loc>
+         <lastmod>2022-01-22</lastmod>
+         <changefreq>daily</changefreq>
+    </url>
+    <url>
+         <loc>None</loc>
+         <lastmod>2022-01-22</lastmod>
          <changefreq>daily</changefreq>
     </url>
 </urlset>
\ No newline at end of file
diff --git a/docs/sitemap.xml.gz b/docs/sitemap.xml.gz
index 59dcaff8..f28479b3 100644
Binary files a/docs/sitemap.xml.gz and b/docs/sitemap.xml.gz differ
diff --git a/docs/slot_definition_disjoint_with/index.html b/docs/slot_definition_disjoint_with/index.html
new file mode 100644
index 00000000..44b3a59e
--- /dev/null
+++ b/docs/slot_definition_disjoint_with/index.html
@@ -0,0 +1,157 @@
+<!DOCTYPE html>
+<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
+<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1.0">
+  
+  
+  
+  <link rel="shortcut icon" href="../img/favicon.ico">
+  <title>Slot: disjoint_with - LinkML Model</title>
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato:400,700|Roboto+Slab:400,700|Inconsolata:400,700" />
+
+  <link rel="stylesheet" href="../css/theme.css" />
+  <link rel="stylesheet" href="../css/theme_extra.css" />
+  <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/styles/github.min.css" />
+  
+  <script>
+    // Current page data
+    var mkdocs_page_name = "Slot: disjoint_with";
+    var mkdocs_page_input_path = "slot_definition_disjoint_with.md";
+    var mkdocs_page_url = null;
+  </script>
+  
+  <script src="../js/jquery-2.1.1.min.js" defer></script>
+  <script src="../js/modernizr-2.8.3.min.js" defer></script>
+  <script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/highlight.min.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script> 
+  <script async src="https://www.googletagmanager.com/gtag/js?id=G-2SYBSJVZ23"></script>
+  <script>
+    window.dataLayer = window.dataLayer || [];
+    function gtag(){dataLayer.push(arguments);}
+    gtag('js', new Date());
+
+    gtag('config', 'G-2SYBSJVZ23');
+  </script>
+</head>
+
+<body class="wy-body-for-nav" role="document">
+
+  <div class="wy-grid-for-nav">
+
+    
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side stickynav">
+    <div class="wy-side-scroll">
+      <div class="wy-side-nav-search">
+        <a href=".." class="icon icon-home"> LinkML Model</a>
+        <div role="search">
+  <form id ="rtd-search-form" class="wy-form" action="../search.html" method="get">
+      <input type="text" name="q" placeholder="Search docs" title="Type search term here" />
+  </form>
+</div>
+      </div>
+
+      <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../home/">Home</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="..">Index</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../credits/">Credits</a>
+                    </li>
+                </ul>
+      </div>
+    </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap">
+
+      
+      <nav class="wy-nav-top" role="navigation" aria-label="top navigation">
+        <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+        <a href="..">LinkML Model</a>
+      </nav>
+
+      
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="breadcrumbs navigation">
+  <ul class="wy-breadcrumbs">
+    <li><a href="..">Docs</a> &raquo;</li>
+    
+      
+    
+    <li>Slot: disjoint_with</li>
+    <li class="wy-breadcrumbs-aside">
+      
+    </li>
+  </ul>
+  
+  <hr/>
+</div>
+
+          <div role="main">
+            <div class="section">
+              
+                <h1 id="slot-disjoint_with">Slot: disjoint_with</h1>
+<p>Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances</p>
+<p>URI: <a href="https://w3id.org/linkml/slot_definition_disjoint_with">linkml:slot_definition_disjoint_with</a></p>
+<h2 id="domain-and-range">Domain and Range</h2>
+<p><a href="../SlotDefinition/">SlotDefinition</a> &#8594;  <sub>0..*</sub> <a href="../SlotDefinition/">SlotDefinition</a></p>
+<h2 id="parents">Parents</h2>
+<ul>
+<li>is_a: <a href="../disjoint_with/">disjoint_with</a></li>
+</ul>
+<h2 id="children">Children</h2>
+<h2 id="used-by">Used by</h2>
+<ul>
+<li><a href="../SlotDefinition/">SlotDefinition</a></li>
+</ul>
+              
+            </div>
+          </div>
+          <footer>
+  
+
+  <hr/>
+
+  <div role="contentinfo">
+    <!-- Copyright etc -->
+    
+  </div>
+
+  Built with <a href="https://www.mkdocs.org/">MkDocs</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
+</footer>
+      
+        </div>
+      </div>
+
+    </section>
+
+  </div>
+
+  <div class="rst-versions" role="note" aria-label="versions">
+  <span class="rst-current-version" data-toggle="rst-current-version">
+    
+    
+    
+  </span>
+</div>
+    <script>var base_url = '..';</script>
+    <script src="../js/theme_extra.js" defer></script>
+    <script src="../js/theme.js" defer></script>
+      <script src="../search/main.js" defer></script>
+    <script defer>
+        window.onload = function () {
+            SphinxRtdTheme.Navigation.enable(true);
+        };
+    </script>
+
+</body>
+</html>
diff --git a/docs/slot_uri/index.html b/docs/slot_uri/index.html
index 1fbc6d82..68c5839e 100644
--- a/docs/slot_uri/index.html
+++ b/docs/slot_uri/index.html
@@ -110,6 +110,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../SlotDefinition/">SlotDefinition</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>public ID</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/source/index.html b/docs/source/index.html
index 074d4e66..8c8e28c2 100644
--- a/docs/source/index.html
+++ b/docs/source/index.html
@@ -136,6 +136,16 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>origin</td>
+</tr>
+<tr>
+<td></td>
+<td></td>
+<td>derived from</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>dcterms:source</td>
diff --git a/docs/status/index.html b/docs/status/index.html
index e74201b6..78b5060a 100644
--- a/docs/status/index.html
+++ b/docs/status/index.html
@@ -123,6 +123,11 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>workflow status</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>bibo:status</td>
diff --git a/docs/symmetric/index.html b/docs/symmetric/index.html
index c1f547c7..1a574c70 100644
--- a/docs/symmetric/index.html
+++ b/docs/symmetric/index.html
@@ -113,6 +113,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../SlotDefinition/">SlotDefinition</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Close Mappings:</strong></td>
+<td></td>
+<td>owl:SymmetricProperty</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/text/index.html b/docs/text/index.html
index efdd3597..6f678365 100644
--- a/docs/text/index.html
+++ b/docs/text/index.html
@@ -109,6 +109,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../PermissibleValue/">PermissibleValue</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>value</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/title/index.html b/docs/title/index.html
index 2e14e998..fcb17519 100644
--- a/docs/title/index.html
+++ b/docs/title/index.html
@@ -136,6 +136,11 @@ <h2 id="other-properties">Other properties</h2>
 </thead>
 <tbody>
 <tr>
+<td><strong>Aliases:</strong></td>
+<td></td>
+<td>long name</td>
+</tr>
+<tr>
 <td><strong>Mappings:</strong></td>
 <td></td>
 <td>dcterms:title</td>
diff --git a/docs/transitive/index.html b/docs/transitive/index.html
index ca6e6da9..8b363270 100644
--- a/docs/transitive/index.html
+++ b/docs/transitive/index.html
@@ -113,6 +113,23 @@ <h2 id="used-by">Used by</h2>
 <ul>
 <li><a href="../SlotDefinition/">SlotDefinition</a></li>
 </ul>
+<h2 id="other-properties">Other properties</h2>
+<table>
+<thead>
+<tr>
+<th></th>
+<th></th>
+<th></th>
+</tr>
+</thead>
+<tbody>
+<tr>
+<td><strong>Close Mappings:</strong></td>
+<td></td>
+<td>owl:TransitiveProperty</td>
+</tr>
+</tbody>
+</table>
               
             </div>
           </div>
diff --git a/docs/unique_key_name/index.html b/docs/unique_key_name/index.html
new file mode 100644
index 00000000..a7f134d0
--- /dev/null
+++ b/docs/unique_key_name/index.html
@@ -0,0 +1,154 @@
+<!DOCTYPE html>
+<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
+<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1.0">
+  
+  
+  
+  <link rel="shortcut icon" href="../img/favicon.ico">
+  <title>Slot: unique_key_name - LinkML Model</title>
+  <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Lato:400,700|Roboto+Slab:400,700|Inconsolata:400,700" />
+
+  <link rel="stylesheet" href="../css/theme.css" />
+  <link rel="stylesheet" href="../css/theme_extra.css" />
+  <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/styles/github.min.css" />
+  
+  <script>
+    // Current page data
+    var mkdocs_page_name = "Slot: unique_key_name";
+    var mkdocs_page_input_path = "unique_key_name.md";
+    var mkdocs_page_url = null;
+  </script>
+  
+  <script src="../js/jquery-2.1.1.min.js" defer></script>
+  <script src="../js/modernizr-2.8.3.min.js" defer></script>
+  <script src="https://cdnjs.cloudflare.com/ajax/libs/highlight.js/10.5.0/highlight.min.js"></script>
+  <script>hljs.initHighlightingOnLoad();</script> 
+  <script async src="https://www.googletagmanager.com/gtag/js?id=G-2SYBSJVZ23"></script>
+  <script>
+    window.dataLayer = window.dataLayer || [];
+    function gtag(){dataLayer.push(arguments);}
+    gtag('js', new Date());
+
+    gtag('config', 'G-2SYBSJVZ23');
+  </script>
+</head>
+
+<body class="wy-body-for-nav" role="document">
+
+  <div class="wy-grid-for-nav">
+
+    
+    <nav data-toggle="wy-nav-shift" class="wy-nav-side stickynav">
+    <div class="wy-side-scroll">
+      <div class="wy-side-nav-search">
+        <a href=".." class="icon icon-home"> LinkML Model</a>
+        <div role="search">
+  <form id ="rtd-search-form" class="wy-form" action="../search.html" method="get">
+      <input type="text" name="q" placeholder="Search docs" title="Type search term here" />
+  </form>
+</div>
+      </div>
+
+      <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../home/">Home</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="..">Index</a>
+                    </li>
+                </ul>
+                <ul>
+                    <li class="toctree-l1"><a class="reference internal" href="../credits/">Credits</a>
+                    </li>
+                </ul>
+      </div>
+    </div>
+    </nav>
+
+    <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap">
+
+      
+      <nav class="wy-nav-top" role="navigation" aria-label="top navigation">
+        <i data-toggle="wy-nav-top" class="fa fa-bars"></i>
+        <a href="..">LinkML Model</a>
+      </nav>
+
+      
+      <div class="wy-nav-content">
+        <div class="rst-content">
+          <div role="navigation" aria-label="breadcrumbs navigation">
+  <ul class="wy-breadcrumbs">
+    <li><a href="..">Docs</a> &raquo;</li>
+    
+      
+    
+    <li>Slot: unique_key_name</li>
+    <li class="wy-breadcrumbs-aside">
+      
+    </li>
+  </ul>
+  
+  <hr/>
+</div>
+
+          <div role="main">
+            <div class="section">
+              
+                <h1 id="slot-unique_key_name">Slot: unique_key_name</h1>
+<p>name of the unique key</p>
+<p>URI: <a href="https://w3id.org/linkml/unique_key_name">linkml:unique_key_name</a></p>
+<h2 id="domain-and-range">Domain and Range</h2>
+<p><a href="../UniqueKey/">UniqueKey</a> &#8594;  <sub>1..1</sub> <a href="../String/">String</a></p>
+<h2 id="parents">Parents</h2>
+<h2 id="children">Children</h2>
+<h2 id="used-by">Used by</h2>
+<ul>
+<li><a href="../UniqueKey/">UniqueKey</a></li>
+</ul>
+              
+            </div>
+          </div>
+          <footer>
+  
+
+  <hr/>
+
+  <div role="contentinfo">
+    <!-- Copyright etc -->
+    
+  </div>
+
+  Built with <a href="https://www.mkdocs.org/">MkDocs</a> using a <a href="https://github.com/snide/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
+</footer>
+      
+        </div>
+      </div>
+
+    </section>
+
+  </div>
+
+  <div class="rst-versions" role="note" aria-label="versions">
+  <span class="rst-current-version" data-toggle="rst-current-version">
+    
+    
+    
+  </span>
+</div>
+    <script>var base_url = '..';</script>
+    <script src="../js/theme_extra.js" defer></script>
+    <script src="../js/theme.js" defer></script>
+      <script src="../search/main.js" defer></script>
+    <script defer>
+        window.onload = function () {
+            SphinxRtdTheme.Navigation.enable(true);
+        };
+    </script>
+
+</body>
+</html>
diff --git a/linkml_model/annotations.py b/linkml_model/annotations.py
index f878c477..86581ef2 100644
--- a/linkml_model/annotations.py
+++ b/linkml_model/annotations.py
@@ -1,5 +1,5 @@
 # Auto generated from annotations.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:25
+# Generation date: 2022-01-22T01:10:50
 # Schema: annotations
 #
 # id: https://w3id.org/linkml/annotations
diff --git a/linkml_model/datasets.py b/linkml_model/datasets.py
index 6a63349a..c72ff326 100644
--- a/linkml_model/datasets.py
+++ b/linkml_model/datasets.py
@@ -1,5 +1,5 @@
 # Auto generated from datasets.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:23
+# Generation date: 2022-01-22T01:10:56
 # Schema: datasets
 #
 # id: https://w3id.org/linkml/datasets
diff --git a/linkml_model/extensions.py b/linkml_model/extensions.py
index 06cfb689..93d465c3 100644
--- a/linkml_model/extensions.py
+++ b/linkml_model/extensions.py
@@ -1,5 +1,5 @@
 # Auto generated from extensions.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:29
+# Generation date: 2022-01-22T01:10:57
 # Schema: extensions
 #
 # id: https://w3id.org/linkml/extensions
diff --git a/linkml_model/graphql/meta.graphql b/linkml_model/graphql/meta.graphql
index 7b40643e..150b4822 100644
--- a/linkml_model/graphql/meta.graphql
+++ b/linkml_model/graphql/meta.graphql
@@ -173,6 +173,8 @@ type ClassDefinition implements ClassExpression
     classificationRules: [AnonymousClassExpression]
     slotNamesUnique: Boolean
     representsRelationship: Boolean
+    disjointWith: [ClassDefinition]
+    childrenAreMutuallyDisjoint: Boolean
     isA: ClassDefinition
     mixins: [ClassDefinition]
     applyTo: [ClassDefinition]
@@ -578,6 +580,8 @@ type SlotDefinition implements SlotExpression
     slotGroup: SlotDefinition
     isGroupingSlot: Boolean
     pathRule: PathExpression
+    disjointWith: [SlotDefinition]
+    childrenAreMutuallyDisjoint: Boolean
     isA: SlotDefinition
     mixins: [SlotDefinition]
     applyTo: [SlotDefinition]
@@ -723,6 +727,7 @@ interface TypeExpression
 
 type UniqueKey implements Extensible, Annotatable, CommonMetadata
   {
+    uniqueKeyName: String!
     uniqueKeySlots: [SlotDefinition]!
     extensions: [Extension]
     annotations: [Annotation]
diff --git a/linkml_model/json/annotations.json b/linkml_model/json/annotations.json
index a6504f67..0185d934 100644
--- a/linkml_model/json/annotations.json
+++ b/linkml_model/json/annotations.json
@@ -317,9 +317,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "annotations.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
+  "source_file_date": "2022-01-22T01:07:33",
   "source_file_size": 833,
-  "generation_date": "2021-12-28T23:38:36",
+  "generation_date": "2022-01-22T01:09:07",
   "@type": "SchemaDefinition",
   "@context": [
     "https://w3id.org/linkml/types.context.jsonld",
diff --git a/linkml_model/json/datasets.json b/linkml_model/json/datasets.json
index c9d7651c..68b2b007 100644
--- a/linkml_model/json/datasets.json
+++ b/linkml_model/json/datasets.json
@@ -1115,9 +1115,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "datasets.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
+  "source_file_date": "2022-01-22T01:07:33",
   "source_file_size": 7649,
-  "generation_date": "2021-12-28T23:38:34",
+  "generation_date": "2022-01-22T01:09:13",
   "@type": "SchemaDefinition",
   "@context": [
     "https://w3id.org/linkml/types.context.jsonld",
diff --git a/linkml_model/json/extensions.json b/linkml_model/json/extensions.json
index b8992d32..6a7da6e9 100644
--- a/linkml_model/json/extensions.json
+++ b/linkml_model/json/extensions.json
@@ -261,9 +261,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "extensions.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
+  "source_file_date": "2022-01-22T01:07:33",
   "source_file_size": 1057,
-  "generation_date": "2021-12-28T23:38:39",
+  "generation_date": "2022-01-22T01:09:14",
   "@type": "SchemaDefinition",
   "@context": [
     "https://w3id.org/linkml/types.context.jsonld",
diff --git a/linkml_model/json/mappings.json b/linkml_model/json/mappings.json
index be7de56a..0029e807 100644
--- a/linkml_model/json/mappings.json
+++ b/linkml_model/json/mappings.json
@@ -204,6 +204,12 @@
     {
       "name": "mappings",
       "definition_uri": "https://w3id.org/linkml/mappings",
+      "aliases": [
+        "xrefs",
+        "identifiers",
+        "alternate identifiers",
+        "alternate ids"
+      ],
       "mappings": [
         "http://www.w3.org/2004/02/skos/core#mappingRelation"
       ],
@@ -311,9 +317,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "mappings.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
-  "source_file_size": 2656,
-  "generation_date": "2021-12-28T23:38:38",
+  "source_file_date": "2022-01-22T01:07:33",
+  "source_file_size": 2755,
+  "generation_date": "2022-01-22T01:09:09",
   "@type": "SchemaDefinition",
   "@context": [
     "https://w3id.org/linkml/types.context.jsonld",
diff --git a/linkml_model/json/meta.json b/linkml_model/json/meta.json
index 477e112c..5c19ae7d 100644
--- a/linkml_model/json/meta.json
+++ b/linkml_model/json/meta.json
@@ -328,6 +328,10 @@
     {
       "name": "name",
       "definition_uri": "https://w3id.org/linkml/name",
+      "aliases": [
+        "short name",
+        "unique name"
+      ],
       "mappings": [
         "http://www.w3.org/2000/01/rdf-schema#label"
       ],
@@ -356,6 +360,9 @@
     {
       "name": "title",
       "definition_uri": "https://w3id.org/linkml/title",
+      "aliases": [
+        "long name"
+      ],
       "mappings": [
         "http://purl.org/dc/terms/title"
       ],
@@ -435,6 +442,9 @@
     {
       "name": "description",
       "definition_uri": "https://w3id.org/linkml/description",
+      "aliases": [
+        "definition"
+      ],
       "mappings": [
         "http://www.w3.org/2004/02/skos/core#definition"
       ],
@@ -456,6 +466,12 @@
     {
       "name": "aliases",
       "definition_uri": "https://w3id.org/linkml/aliases",
+      "aliases": [
+        "synonyms",
+        "alternate names",
+        "alternative labels",
+        "designations"
+      ],
       "mappings": [
         "http://www.w3.org/2004/02/skos/core#altLabel"
       ],
@@ -616,6 +632,24 @@
       "range": "uriorcurie",
       "@type": "SlotDefinition"
     },
+    {
+      "name": "owned_by",
+      "definition_uri": "https://w3id.org/linkml/owned_by",
+      "aliases": [
+        "steward",
+        "owner"
+      ],
+      "close_mappings": [
+        "http://www.w3.org/2000/01/rdf-schema#isDefinedBy"
+      ],
+      "description": "agent that owns or is the steward of the element",
+      "from_schema": "https://w3id.org/linkml/meta",
+      "domain": "Element",
+      "slot_uri": "https://w3id.org/linkml/owned_by",
+      "owner": "owned_by",
+      "range": "uriorcurie",
+      "@type": "SlotDefinition"
+    },
     {
       "name": "created_by",
       "definition_uri": "https://w3id.org/linkml/created_by",
@@ -687,6 +721,9 @@
     {
       "name": "status",
       "definition_uri": "https://w3id.org/linkml/status",
+      "aliases": [
+        "workflow status"
+      ],
       "mappings": [
         "http://purl.org/ontology/bibo/status"
       ],
@@ -710,6 +747,10 @@
     {
       "name": "source",
       "definition_uri": "https://w3id.org/linkml/source",
+      "aliases": [
+        "origin",
+        "derived from"
+      ],
       "mappings": [
         "http://purl.org/dc/terms/source"
       ],
@@ -923,6 +964,9 @@
     {
       "name": "text",
       "definition_uri": "https://w3id.org/linkml/text",
+      "aliases": [
+        "value"
+      ],
       "from_schema": "https://w3id.org/linkml/meta",
       "domain": "PermissibleValue",
       "slot_uri": "https://w3id.org/linkml/text",
@@ -938,6 +982,9 @@
     {
       "name": "meaning",
       "definition_uri": "https://w3id.org/linkml/meaning",
+      "aliases": [
+        "PV meaning"
+      ],
       "description": "the value meaning (in the 11179 sense) of a permissible value",
       "notes": [
         "we may want to change the range of this (and other) elements in the model to an entitydescription type construct"
@@ -1622,6 +1669,9 @@
     {
       "name": "class_uri",
       "definition_uri": "https://w3id.org/linkml/class_uri",
+      "aliases": [
+        "public ID"
+      ],
       "description": "URI of the class in an RDF environment",
       "from_schema": "https://w3id.org/linkml/meta",
       "domain": "ClassDefinition",
@@ -1721,6 +1771,22 @@
       "range": "UniqueKey",
       "@type": "SlotDefinition"
     },
+    {
+      "name": "unique_key_name",
+      "definition_uri": "https://w3id.org/linkml/unique_key_name",
+      "description": "name of the unique key",
+      "from_schema": "https://w3id.org/linkml/meta",
+      "domain": "UniqueKey",
+      "slot_uri": "https://w3id.org/linkml/unique_key_name",
+      "key": true,
+      "owner": "UniqueKey",
+      "domain_of": [
+        "UniqueKey"
+      ],
+      "range": "string",
+      "required": true,
+      "@type": "SlotDefinition"
+    },
     {
       "name": "unique_key_slots",
       "definition_uri": "https://w3id.org/linkml/unique_key_slots",
@@ -1770,6 +1836,9 @@
     {
       "name": "range",
       "definition_uri": "https://w3id.org/linkml/range",
+      "aliases": [
+        "value domain"
+      ],
       "description": "defines the type of the object of the slot.  Given the following slot definition\n  S1:\n    domain: C1\n    range:  C2\nthe declaration\n  X:\n    S1: Y\n\nimplicitly asserts Y is an instance of C2\n",
       "comments": [
         "range is underspecified, as not all elements can appear as the range of a slot."
@@ -1789,6 +1858,9 @@
     {
       "name": "slot_uri",
       "definition_uri": "https://w3id.org/linkml/slot_uri",
+      "aliases": [
+        "public ID"
+      ],
       "description": "predicate of this slot for semantic web application",
       "from_schema": "https://w3id.org/linkml/meta",
       "domain": "SlotDefinition",
@@ -2319,6 +2391,37 @@
       "range": "SlotDefinition",
       "@type": "SlotDefinition"
     },
+    {
+      "name": "disjoint_with",
+      "definition_uri": "https://w3id.org/linkml/disjoint_with",
+      "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+      "from_schema": "https://w3id.org/linkml/meta",
+      "domain": "Definition",
+      "slot_uri": "https://w3id.org/linkml/disjoint_with",
+      "multivalued": true,
+      "owner": "disjoint_with",
+      "domain_of": [
+        "SlotDefinition",
+        "ClassDefinition"
+      ],
+      "range": "Definition",
+      "@type": "SlotDefinition"
+    },
+    {
+      "name": "children_are_mutually_disjoint",
+      "definition_uri": "https://w3id.org/linkml/children_are_mutually_disjoint",
+      "description": "If true then all direct is_a children are mutually disjoint and share no instances in common",
+      "from_schema": "https://w3id.org/linkml/meta",
+      "domain": "Definition",
+      "slot_uri": "https://w3id.org/linkml/children_are_mutually_disjoint",
+      "owner": "children_are_mutually_disjoint",
+      "domain_of": [
+        "SlotDefinition",
+        "ClassDefinition"
+      ],
+      "range": "boolean",
+      "@type": "SlotDefinition"
+    },
     {
       "name": "relational_logical_characteristic",
       "definition_uri": "https://w3id.org/linkml/relational_logical_characteristic",
@@ -2334,6 +2437,9 @@
     {
       "name": "symmetric",
       "definition_uri": "https://w3id.org/linkml/symmetric",
+      "close_mappings": [
+        "http://www.w3.org/2002/07/owl#SymmetricProperty"
+      ],
       "description": "If s is symmetric, and i.s=v, then v.s=i",
       "from_schema": "https://w3id.org/linkml/meta",
       "is_a": "relational_logical_characteristic",
@@ -2349,6 +2455,9 @@
     {
       "name": "asymmetric",
       "definition_uri": "https://w3id.org/linkml/asymmetric",
+      "close_mappings": [
+        "http://www.w3.org/2002/07/owl#AsymmetricProperty"
+      ],
       "description": "If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i",
       "comments": [
         "asymmetry is the combination of antisymmetry and irreflexivity"
@@ -2367,6 +2476,9 @@
     {
       "name": "reflexive",
       "definition_uri": "https://w3id.org/linkml/reflexive",
+      "close_mappings": [
+        "http://www.w3.org/2002/07/owl#ReflexiveProperty"
+      ],
       "description": "If s is reflexive, then i.s=i for all instances i",
       "comments": [
         "it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive"
@@ -2385,6 +2497,9 @@
     {
       "name": "irreflexive",
       "definition_uri": "https://w3id.org/linkml/irreflexive",
+      "close_mappings": [
+        "http://www.w3.org/2002/07/owl#IrreflexiveProperty"
+      ],
       "description": "If s is irreflexive, then there exists no i such i.s=i",
       "from_schema": "https://w3id.org/linkml/meta",
       "is_a": "relational_logical_characteristic",
@@ -2415,6 +2530,9 @@
     {
       "name": "transitive",
       "definition_uri": "https://w3id.org/linkml/transitive",
+      "close_mappings": [
+        "http://www.w3.org/2002/07/owl#TransitiveProperty"
+      ],
       "description": "If s is transitive, and i.s=z, and s.s=j, then i.s=j",
       "from_schema": "https://w3id.org/linkml/meta",
       "is_a": "relational_logical_characteristic",
@@ -2506,6 +2624,9 @@
     {
       "name": "minimum_value",
       "definition_uri": "https://w3id.org/linkml/minimum_value",
+      "aliases": [
+        "low value"
+      ],
       "description": "for slots with ranges of type number, the value must be equal to or higher than this",
       "from_schema": "https://w3id.org/linkml/meta",
       "domain": "SlotDefinition",
@@ -2522,6 +2643,9 @@
     {
       "name": "maximum_value",
       "definition_uri": "https://w3id.org/linkml/maximum_value",
+      "aliases": [
+        "high value"
+      ],
       "description": "for slots with ranges of type number, the value must be equal to or lowe than this",
       "from_schema": "https://w3id.org/linkml/meta",
       "domain": "SlotDefinition",
@@ -2677,6 +2801,9 @@
     {
       "name": "alt_descriptions",
       "definition_uri": "https://w3id.org/linkml/alt_descriptions",
+      "aliases": [
+        "alternate definitions"
+      ],
       "from_schema": "https://w3id.org/linkml/meta",
       "domain": "Element",
       "slot_uri": "https://w3id.org/linkml/alt_descriptions",
@@ -2990,6 +3117,12 @@
     {
       "name": "mappings",
       "definition_uri": "https://w3id.org/linkml/mappings",
+      "aliases": [
+        "xrefs",
+        "identifiers",
+        "alternate identifiers",
+        "alternate ids"
+      ],
       "mappings": [
         "http://www.w3.org/2004/02/skos/core#mappingRelation"
       ],
@@ -3209,6 +3342,10 @@
     {
       "name": "schema_definition_name",
       "definition_uri": "https://w3id.org/linkml/name",
+      "aliases": [
+        "short name",
+        "unique name"
+      ],
       "mappings": [
         "http://www.w3.org/2000/01/rdf-schema#label"
       ],
@@ -3611,6 +3748,25 @@
       "range": "SlotDefinition",
       "@type": "SlotDefinition"
     },
+    {
+      "name": "slot_definition_disjoint_with",
+      "definition_uri": "https://w3id.org/linkml/disjoint_with",
+      "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+      "from_schema": "https://w3id.org/linkml/meta",
+      "is_a": "disjoint_with",
+      "domain": "SlotDefinition",
+      "slot_uri": "https://w3id.org/linkml/disjoint_with",
+      "multivalued": true,
+      "alias": "disjoint_with",
+      "owner": "SlotDefinition",
+      "domain_of": [
+        "SlotDefinition"
+      ],
+      "is_usage_slot": true,
+      "usage_slot_name": "disjoint_with",
+      "range": "SlotDefinition",
+      "@type": "SlotDefinition"
+    },
     {
       "name": "class_expression_any_of",
       "definition_uri": "https://w3id.org/linkml/any_of",
@@ -3797,6 +3953,25 @@
       "range": "ClassRule",
       "@type": "SlotDefinition"
     },
+    {
+      "name": "class_definition_disjoint_with",
+      "definition_uri": "https://w3id.org/linkml/disjoint_with",
+      "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+      "from_schema": "https://w3id.org/linkml/meta",
+      "is_a": "disjoint_with",
+      "domain": "ClassDefinition",
+      "slot_uri": "https://w3id.org/linkml/disjoint_with",
+      "multivalued": true,
+      "alias": "disjoint_with",
+      "owner": "ClassDefinition",
+      "domain_of": [
+        "ClassDefinition"
+      ],
+      "is_usage_slot": true,
+      "usage_slot_name": "disjoint_with",
+      "range": "ClassDefinition",
+      "@type": "SlotDefinition"
+    },
     {
       "name": "permissible_value_is_a",
       "definition_uri": "https://w3id.org/linkml/is_a",
@@ -4513,6 +4688,8 @@
         "slot_group",
         "is_grouping_slot",
         "path_rule",
+        "slot_definition_disjoint_with",
+        "children_are_mutually_disjoint",
         "slot_definition_is_a",
         "slot_definition_mixins",
         "slot_definition_apply_to",
@@ -4668,6 +4845,8 @@
         "classification_rules",
         "slot_names_unique",
         "represents_relationship",
+        "class_definition_disjoint_with",
+        "children_are_mutually_disjoint",
         "class_definition_is_a",
         "class_definition_mixins",
         "class_definition_apply_to",
@@ -4796,6 +4975,9 @@
     {
       "name": "PermissibleValue",
       "definition_uri": "https://w3id.org/linkml/PermissibleValue",
+      "aliases": [
+        "PV"
+      ],
       "description": "a permissible value, accompanied by intended text and an optional mapping to a concept URI",
       "from_schema": "https://w3id.org/linkml/meta",
       "mixins": [
@@ -4841,6 +5023,7 @@
         "CommonMetadata"
       ],
       "slots": [
+        "unique_key_name",
         "unique_key_slots",
         "extensions",
         "annotations",
@@ -4930,9 +5113,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "meta.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
-  "source_file_size": 51901,
-  "generation_date": "2021-12-28T23:38:41",
+  "source_file_date": "2022-01-22T01:07:33",
+  "source_file_size": 53722,
+  "generation_date": "2022-01-22T01:09:11",
   "@type": "SchemaDefinition",
   "@context": [
     "https://w3id.org/linkml/types.context.jsonld",
diff --git a/linkml_model/json/types.json b/linkml_model/json/types.json
index 38bda2f0..ba8fcc6e 100644
--- a/linkml_model/json/types.json
+++ b/linkml_model/json/types.json
@@ -169,9 +169,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "types.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
+  "source_file_date": "2022-01-22T01:07:33",
   "source_file_size": 2676,
-  "generation_date": "2021-12-28T23:38:33",
+  "generation_date": "2022-01-22T01:09:16",
   "@type": "SchemaDefinition",
   "@context": [
     {
diff --git a/linkml_model/json/validation.json b/linkml_model/json/validation.json
index a3d3df9a..b2db738b 100644
--- a/linkml_model/json/validation.json
+++ b/linkml_model/json/validation.json
@@ -455,9 +455,9 @@
   ],
   "metamodel_version": "1.7.0",
   "source_file": "validation.yaml",
-  "source_file_date": "2021-12-28T23:36:45",
+  "source_file_date": "2022-01-22T01:07:33",
   "source_file_size": 2927,
-  "generation_date": "2021-12-28T23:38:43",
+  "generation_date": "2022-01-22T01:09:05",
   "@type": "SchemaDefinition",
   "@context": [
     "https://w3id.org/linkml/types.context.jsonld",
diff --git a/linkml_model/jsonld/annotations.context.jsonld b/linkml_model/jsonld/annotations.context.jsonld
index b3ec866c..fbcfc97f 100644
--- a/linkml_model/jsonld/annotations.context.jsonld
+++ b/linkml_model/jsonld/annotations.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from annotations.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:48\n    Schema: annotations\n    \n    id: https://w3id.org/linkml/annotations\n    description: Annotations mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from annotations.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:18\n    Schema: annotations\n    \n    id: https://w3id.org/linkml/annotations\n    description: Annotations mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "@vocab": "https://w3id.org/linkml/",
diff --git a/linkml_model/jsonld/annotations.model.context.jsonld b/linkml_model/jsonld/annotations.model.context.jsonld
index 88eaa533..8f129f69 100644
--- a/linkml_model/jsonld/annotations.model.context.jsonld
+++ b/linkml_model/jsonld/annotations.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from annotations.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:39:00\n    Schema: annotations\n    \n    id: https://w3id.org/linkml/annotations\n    description: Annotations mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from annotations.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:30\n    Schema: annotations\n    \n    id: https://w3id.org/linkml/annotations\n    description: Annotations mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "@vocab": "https://w3id.org/linkml/",
diff --git a/linkml_model/jsonld/datasets.context.jsonld b/linkml_model/jsonld/datasets.context.jsonld
index 07f3c80b..d27a894d 100644
--- a/linkml_model/jsonld/datasets.context.jsonld
+++ b/linkml_model/jsonld/datasets.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from datasets.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:46\n    Schema: datasets\n    \n    id: https://w3id.org/linkml/datasets\n    description: A datamodel for datasets\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from datasets.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:24\n    Schema: datasets\n    \n    id: https://w3id.org/linkml/datasets\n    description: A datamodel for datasets\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "bibo": "http://example.org/UNKNOWN/bibo/",
       "csvw": "http://www.w3.org/ns/csvw#",
diff --git a/linkml_model/jsonld/datasets.model.context.jsonld b/linkml_model/jsonld/datasets.model.context.jsonld
index 86305611..e47005be 100644
--- a/linkml_model/jsonld/datasets.model.context.jsonld
+++ b/linkml_model/jsonld/datasets.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from datasets.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:59\n    Schema: datasets\n    \n    id: https://w3id.org/linkml/datasets\n    description: A datamodel for datasets\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from datasets.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:35\n    Schema: datasets\n    \n    id: https://w3id.org/linkml/datasets\n    description: A datamodel for datasets\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "bibo": "http://example.org/UNKNOWN/bibo/",
       "csvw": "http://www.w3.org/ns/csvw#",
diff --git a/linkml_model/jsonld/extensions.context.jsonld b/linkml_model/jsonld/extensions.context.jsonld
index 2f446d94..e3ed13c7 100644
--- a/linkml_model/jsonld/extensions.context.jsonld
+++ b/linkml_model/jsonld/extensions.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from extensions.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:51\n    Schema: extensions\n    \n    id: https://w3id.org/linkml/extensions\n    description: Extension mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from extensions.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:25\n    Schema: extensions\n    \n    id: https://w3id.org/linkml/extensions\n    description: Extension mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "@vocab": "https://w3id.org/linkml/",
diff --git a/linkml_model/jsonld/extensions.model.context.jsonld b/linkml_model/jsonld/extensions.model.context.jsonld
index 2e6b5f27..d577b09a 100644
--- a/linkml_model/jsonld/extensions.model.context.jsonld
+++ b/linkml_model/jsonld/extensions.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from extensions.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:39:04\n    Schema: extensions\n    \n    id: https://w3id.org/linkml/extensions\n    description: Extension mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from extensions.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:37\n    Schema: extensions\n    \n    id: https://w3id.org/linkml/extensions\n    description: Extension mixin\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "@vocab": "https://w3id.org/linkml/",
diff --git a/linkml_model/jsonld/mappings.context.jsonld b/linkml_model/jsonld/mappings.context.jsonld
index 1e662892..ed3aa971 100644
--- a/linkml_model/jsonld/mappings.context.jsonld
+++ b/linkml_model/jsonld/mappings.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from mappings.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:50\n    Schema: mappings\n    \n    id: https://w3id.org/linkml/mappings\n    description: LinkML model for mappings\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from mappings.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:20\n    Schema: mappings\n    \n    id: https://w3id.org/linkml/mappings\n    description: LinkML model for mappings\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "IAO": {
          "@id": "http://purl.obolibrary.org/obo/IAO_",
diff --git a/linkml_model/jsonld/mappings.model.context.jsonld b/linkml_model/jsonld/mappings.model.context.jsonld
index ab48b74e..1a864ea2 100644
--- a/linkml_model/jsonld/mappings.model.context.jsonld
+++ b/linkml_model/jsonld/mappings.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from mappings.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:39:02\n    Schema: mappings\n    \n    id: https://w3id.org/linkml/mappings\n    description: LinkML model for mappings\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from mappings.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:31\n    Schema: mappings\n    \n    id: https://w3id.org/linkml/mappings\n    description: LinkML model for mappings\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "IAO": {
          "@id": "http://purl.obolibrary.org/obo/IAO_",
diff --git a/linkml_model/jsonld/meta.context.jsonld b/linkml_model/jsonld/meta.context.jsonld
index 0caeeb6b..1fd104da 100644
--- a/linkml_model/jsonld/meta.context.jsonld
+++ b/linkml_model/jsonld/meta.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:53\n    Schema: meta\n    \n    id: https://w3id.org/linkml/meta\n    description: A metamodel for defining linked open data schemas\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:22\n    Schema: meta\n    \n    id: https://w3id.org/linkml/meta\n    description: A metamodel for defining linked open data schemas\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "IAO": {
          "@id": "http://purl.obolibrary.org/obo/IAO_",
@@ -65,6 +65,9 @@
          "@type": "@id",
          "@id": "skos:broadMatch"
       },
+      "children_are_mutually_disjoint": {
+         "@type": "xsd:boolean"
+      },
       "class_uri": {
          "@type": "@id"
       },
@@ -120,6 +123,9 @@
       "designates_type": {
          "@type": "xsd:boolean"
       },
+      "disjoint_with": {
+         "@type": "@id"
+      },
       "domain": {
          "@type": "@id"
       },
@@ -273,6 +279,9 @@
       "open_world": {
          "@type": "xsd:boolean"
       },
+      "owned_by": {
+         "@type": "@id"
+      },
       "owner": {
          "@type": "@id"
       },
diff --git a/linkml_model/jsonld/meta.model.context.jsonld b/linkml_model/jsonld/meta.model.context.jsonld
index 91c0392e..5f874291 100644
--- a/linkml_model/jsonld/meta.model.context.jsonld
+++ b/linkml_model/jsonld/meta.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:39:06\n    Schema: meta\n    \n    id: https://w3id.org/linkml/meta\n    description: A metamodel for defining linked open data schemas\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:33\n    Schema: meta\n    \n    id: https://w3id.org/linkml/meta\n    description: A metamodel for defining linked open data schemas\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "IAO": {
          "@id": "http://purl.obolibrary.org/obo/IAO_",
@@ -65,6 +65,9 @@
          "@type": "@id",
          "@id": "skos:broadMatch"
       },
+      "children_are_mutually_disjoint": {
+         "@type": "xsd:boolean"
+      },
       "class_uri": {
          "@type": "@id"
       },
@@ -120,6 +123,9 @@
       "designates_type": {
          "@type": "xsd:boolean"
       },
+      "disjoint_with": {
+         "@type": "@id"
+      },
       "domain": {
          "@type": "@id"
       },
@@ -273,6 +279,9 @@
       "open_world": {
          "@type": "xsd:boolean"
       },
+      "owned_by": {
+         "@type": "@id"
+      },
       "owner": {
          "@type": "@id"
       },
diff --git a/linkml_model/jsonld/types.context.jsonld b/linkml_model/jsonld/types.context.jsonld
index f468ba5f..c4077516 100644
--- a/linkml_model/jsonld/types.context.jsonld
+++ b/linkml_model/jsonld/types.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from types.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:45\n    Schema: types\n    \n    id: https://w3id.org/linkml/types\n    description: Shared type definitions for the core LinkML mode and metamodel\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from types.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:27\n    Schema: types\n    \n    id: https://w3id.org/linkml/types\n    description: Shared type definitions for the core LinkML mode and metamodel\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "shex": "http://www.w3.org/ns/shex#",
diff --git a/linkml_model/jsonld/types.model.context.jsonld b/linkml_model/jsonld/types.model.context.jsonld
index 48279f1b..2136bc10 100644
--- a/linkml_model/jsonld/types.model.context.jsonld
+++ b/linkml_model/jsonld/types.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from types.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:57\n    Schema: types\n    \n    id: https://w3id.org/linkml/types\n    description: Shared type definitions for the core LinkML mode and metamodel\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from types.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:38\n    Schema: types\n    \n    id: https://w3id.org/linkml/types\n    description: Shared type definitions for the core LinkML mode and metamodel\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "shex": "http://www.w3.org/ns/shex#",
diff --git a/linkml_model/jsonld/validation.context.jsonld b/linkml_model/jsonld/validation.context.jsonld
index 47f7a371..2840e1bd 100644
--- a/linkml_model/jsonld/validation.context.jsonld
+++ b/linkml_model/jsonld/validation.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from validation.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:38:56\n    Schema: reporting\n    \n    id: https://w3id.org/linkml/reporting\n    description: A datamodel for reports on data\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from validation.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:17\n    Schema: reporting\n    \n    id: https://w3id.org/linkml/reporting\n    description: A datamodel for reports on data\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "owl": "http://www.w3.org/2002/07/owl#",
diff --git a/linkml_model/jsonld/validation.model.context.jsonld b/linkml_model/jsonld/validation.model.context.jsonld
index 657b392a..42058b15 100644
--- a/linkml_model/jsonld/validation.model.context.jsonld
+++ b/linkml_model/jsonld/validation.model.context.jsonld
@@ -1,5 +1,5 @@
 {
-   "_comments": "Auto generated from validation.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2021-12-28T23:39:08\n    Schema: reporting\n    \n    id: https://w3id.org/linkml/reporting\n    description: A datamodel for reports on data\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
+   "_comments": "Auto generated from validation.yaml by jsonldcontextgen.py version: 0.1.1\n    Generation date: 2022-01-22T01:09:28\n    Schema: reporting\n    \n    id: https://w3id.org/linkml/reporting\n    description: A datamodel for reports on data\n    license: https://creativecommons.org/publicdomain/zero/1.0/\n    ",
    "@context": {
       "linkml": "https://w3id.org/linkml/",
       "owl": "http://www.w3.org/2002/07/owl#",
diff --git a/linkml_model/jsonschema/meta.schema.json b/linkml_model/jsonschema/meta.schema.json
index aebbf255..80e34c1f 100644
--- a/linkml_model/jsonschema/meta.schema.json
+++ b/linkml_model/jsonschema/meta.schema.json
@@ -556,6 +556,10 @@
                },
                "type": "array"
             },
+            "children_are_mutually_disjoint": {
+               "description": "If true then all direct is_a children are mutually disjoint and share no instances in common",
+               "type": "boolean"
+            },
             "class_uri": {
                "description": "URI of the class in an RDF environment",
                "type": "string"
@@ -621,6 +625,13 @@
                "description": "a description of the element's purpose and use",
                "type": "string"
             },
+            "disjoint_with": {
+               "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
             "exact_mappings": {
                "description": "A list of terms from different schemas or terminology systems that have identical meaning.",
                "items": {
@@ -822,11 +833,10 @@
                "type": "array"
             },
             "unique_keys": {
-               "description": "Set of unique keys for this slot",
-               "items": {
-                  "$ref": "#/$defs/UniqueKey"
+               "additionalProperties": {
+                  "$ref": "#/$defs/UniqueKey__identifier_optional"
                },
-               "type": "array"
+               "description": "Set of unique keys for this slot"
             },
             "values_from": {
                "description": "the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot",
@@ -901,6 +911,10 @@
                },
                "type": "array"
             },
+            "children_are_mutually_disjoint": {
+               "description": "If true then all direct is_a children are mutually disjoint and share no instances in common",
+               "type": "boolean"
+            },
             "class_uri": {
                "description": "URI of the class in an RDF environment",
                "type": "string"
@@ -966,6 +980,13 @@
                "description": "a description of the element's purpose and use",
                "type": "string"
             },
+            "disjoint_with": {
+               "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
             "exact_mappings": {
                "description": "A list of terms from different schemas or terminology systems that have identical meaning.",
                "items": {
@@ -1167,11 +1188,10 @@
                "type": "array"
             },
             "unique_keys": {
-               "description": "Set of unique keys for this slot",
-               "items": {
-                  "$ref": "#/$defs/UniqueKey"
+               "additionalProperties": {
+                  "$ref": "#/$defs/UniqueKey__identifier_optional"
                },
-               "type": "array"
+               "description": "Set of unique keys for this slot"
             },
             "values_from": {
                "description": "the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot",
@@ -2621,6 +2641,10 @@
                },
                "type": "array"
             },
+            "children_are_mutually_disjoint": {
+               "description": "If true then all direct is_a children are mutually disjoint and share no instances in common",
+               "type": "boolean"
+            },
             "close_mappings": {
                "description": "A list of terms from different schemas or terminology systems that have close meaning.",
                "items": {
@@ -2672,6 +2696,13 @@
                "description": "True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition",
                "type": "boolean"
             },
+            "disjoint_with": {
+               "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
             "domain": {
                "description": "defines the type of the subject of the slot.  Given the following slot definition\n  S1:\n    domain: C1\n    range:  C2\nthe declaration\n  X:\n    S1: Y\n\nimplicitly asserts that X is an instance of C1\n",
                "type": "string"
@@ -3086,6 +3117,10 @@
                },
                "type": "array"
             },
+            "children_are_mutually_disjoint": {
+               "description": "If true then all direct is_a children are mutually disjoint and share no instances in common",
+               "type": "boolean"
+            },
             "close_mappings": {
                "description": "A list of terms from different schemas or terminology systems that have close meaning.",
                "items": {
@@ -3137,6 +3172,13 @@
                "description": "True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition",
                "type": "boolean"
             },
+            "disjoint_with": {
+               "description": "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
             "domain": {
                "description": "defines the type of the subject of the slot.  Given the following slot definition\n  S1:\n    domain: C1\n    range:  C2\nthe declaration\n  X:\n    S1: Y\n\nimplicitly asserts that X is an instance of C1\n",
                "type": "string"
@@ -4427,6 +4469,124 @@
                },
                "type": "array"
             },
+            "unique_key_name": {
+               "description": "name of the unique key",
+               "type": "string"
+            },
+            "unique_key_slots": {
+               "description": "list of slot names that form a key",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            }
+         },
+         "required": [
+            "unique_key_name",
+            "unique_key_slots"
+         ],
+         "title": "UniqueKey",
+         "type": "object"
+      },
+      "UniqueKey__identifier_optional": {
+         "additionalProperties": false,
+         "description": "a collection of slots whose values uniquely identify an instance of a class",
+         "properties": {
+            "alt_descriptions": {
+               "additionalProperties": {
+                  "$ref": "#/$defs/AltDescription__identifier_optional"
+               }
+            },
+            "annotations": {
+               "additionalProperties": {
+                  "$ref": "#/$defs/Annotation__identifier_optional"
+               },
+               "description": "a collection of tag/text tuples with the semantics of OWL Annotation"
+            },
+            "comments": {
+               "description": "notes and comments about an element intended for external consumption",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
+            "deprecated": {
+               "description": "Description of why and when this element will no longer be used",
+               "type": "string"
+            },
+            "deprecated_element_has_exact_replacement": {
+               "description": "When an element is deprecated, it can be automatically replaced by this uri or curie",
+               "type": "string"
+            },
+            "deprecated_element_has_possible_replacement": {
+               "description": "When an element is deprecated, it can be potentially replaced by this uri or curie",
+               "type": "string"
+            },
+            "description": {
+               "description": "a description of the element's purpose and use",
+               "type": "string"
+            },
+            "examples": {
+               "description": "example usages of an element",
+               "items": {
+                  "$ref": "#/$defs/Example"
+               },
+               "type": "array"
+            },
+            "extensions": {
+               "additionalProperties": {
+                  "$ref": "#/$defs/Extension__identifier_optional"
+               },
+               "description": "a tag/text tuple attached to an arbitrary element"
+            },
+            "from_schema": {
+               "description": "id of the schema that defined the element",
+               "type": "string"
+            },
+            "imported_from": {
+               "description": "the imports entry that this element was derived from.  Empty means primary source",
+               "type": "string"
+            },
+            "in_subset": {
+               "description": "used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph)",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
+            "notes": {
+               "description": "editorial notes about an element intended for internal consumption",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
+            "see_also": {
+               "description": "a reference",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
+            "source": {
+               "description": "A related resource from which the element is derived.",
+               "type": "string"
+            },
+            "title": {
+               "description": "the official title of the element",
+               "type": "string"
+            },
+            "todos": {
+               "description": "Outstanding issue that needs resolution",
+               "items": {
+                  "type": "string"
+               },
+               "type": "array"
+            },
+            "unique_key_name": {
+               "description": "name of the unique key",
+               "type": "string"
+            },
             "unique_key_slots": {
                "description": "list of slot names that form a key",
                "items": {
diff --git a/linkml_model/mappings.py b/linkml_model/mappings.py
index 9b36f11e..31f32684 100644
--- a/linkml_model/mappings.py
+++ b/linkml_model/mappings.py
@@ -1,5 +1,5 @@
 # Auto generated from mappings.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:27
+# Generation date: 2022-01-22T01:10:52
 # Schema: mappings
 #
 # id: https://w3id.org/linkml/mappings
diff --git a/linkml_model/meta.py b/linkml_model/meta.py
index f5c35e5a..6103a8a6 100644
--- a/linkml_model/meta.py
+++ b/linkml_model/meta.py
@@ -1,5 +1,5 @@
 # Auto generated from meta.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:30
+# Generation date: 2022-01-22T01:10:53
 # Schema: meta
 #
 # id: https://w3id.org/linkml/meta
@@ -102,6 +102,10 @@ class PermissibleValueText(extended_str):
     pass
 
 
+class UniqueKeyUniqueKeyName(extended_str):
+    pass
+
+
 @dataclass
 class CommonMetadata(YAMLRoot):
     """
@@ -1231,6 +1235,8 @@ class SlotDefinition(Definition):
     slot_group: Optional[Union[str, SlotDefinitionName]] = None
     is_grouping_slot: Optional[Union[bool, Bool]] = None
     path_rule: Optional[Union[dict, PathExpression]] = None
+    disjoint_with: Optional[Union[Union[str, SlotDefinitionName], List[Union[str, SlotDefinitionName]]]] = empty_list()
+    children_are_mutually_disjoint: Optional[Union[bool, Bool]] = None
     is_a: Optional[Union[str, SlotDefinitionName]] = None
     mixins: Optional[Union[Union[str, SlotDefinitionName], List[Union[str, SlotDefinitionName]]]] = empty_list()
     apply_to: Optional[Union[Union[str, SlotDefinitionName], List[Union[str, SlotDefinitionName]]]] = empty_list()
@@ -1360,6 +1366,13 @@ def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]):
         if self.path_rule is not None and not isinstance(self.path_rule, PathExpression):
             self.path_rule = PathExpression(**as_dict(self.path_rule))
 
+        if not isinstance(self.disjoint_with, list):
+            self.disjoint_with = [self.disjoint_with] if self.disjoint_with is not None else []
+        self.disjoint_with = [v if isinstance(v, SlotDefinitionName) else SlotDefinitionName(v) for v in self.disjoint_with]
+
+        if self.children_are_mutually_disjoint is not None and not isinstance(self.children_are_mutually_disjoint, Bool):
+            self.children_are_mutually_disjoint = Bool(self.children_are_mutually_disjoint)
+
         if self.is_a is not None and not isinstance(self.is_a, SlotDefinitionName):
             self.is_a = SlotDefinitionName(self.is_a)
 
@@ -1537,11 +1550,13 @@ class ClassDefinition(Definition):
     union_of: Optional[Union[Union[str, ClassDefinitionName], List[Union[str, ClassDefinitionName]]]] = empty_list()
     defining_slots: Optional[Union[Union[str, SlotDefinitionName], List[Union[str, SlotDefinitionName]]]] = empty_list()
     tree_root: Optional[Union[bool, Bool]] = None
-    unique_keys: Optional[Union[Union[dict, "UniqueKey"], List[Union[dict, "UniqueKey"]]]] = empty_list()
+    unique_keys: Optional[Union[Dict[Union[str, UniqueKeyUniqueKeyName], Union[dict, "UniqueKey"]], List[Union[dict, "UniqueKey"]]]] = empty_dict()
     rules: Optional[Union[Union[dict, "ClassRule"], List[Union[dict, "ClassRule"]]]] = empty_list()
     classification_rules: Optional[Union[Union[dict, AnonymousClassExpression], List[Union[dict, AnonymousClassExpression]]]] = empty_list()
     slot_names_unique: Optional[Union[bool, Bool]] = None
     represents_relationship: Optional[Union[bool, Bool]] = None
+    disjoint_with: Optional[Union[Union[str, ClassDefinitionName], List[Union[str, ClassDefinitionName]]]] = empty_list()
+    children_are_mutually_disjoint: Optional[Union[bool, Bool]] = None
     is_a: Optional[Union[str, ClassDefinitionName]] = None
     mixins: Optional[Union[Union[str, ClassDefinitionName], List[Union[str, ClassDefinitionName]]]] = empty_list()
     apply_to: Optional[Union[Union[str, ClassDefinitionName], List[Union[str, ClassDefinitionName]]]] = empty_list()
@@ -1582,7 +1597,7 @@ def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]):
         if self.tree_root is not None and not isinstance(self.tree_root, Bool):
             self.tree_root = Bool(self.tree_root)
 
-        self._normalize_inlined_as_dict(slot_name="unique_keys", slot_type=UniqueKey, key_name="unique_key_slots", keyed=False)
+        self._normalize_inlined_as_dict(slot_name="unique_keys", slot_type=UniqueKey, key_name="unique_key_name", keyed=True)
 
         if not isinstance(self.rules, list):
             self.rules = [self.rules] if self.rules is not None else []
@@ -1598,6 +1613,13 @@ def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]):
         if self.represents_relationship is not None and not isinstance(self.represents_relationship, Bool):
             self.represents_relationship = Bool(self.represents_relationship)
 
+        if not isinstance(self.disjoint_with, list):
+            self.disjoint_with = [self.disjoint_with] if self.disjoint_with is not None else []
+        self.disjoint_with = [v if isinstance(v, ClassDefinitionName) else ClassDefinitionName(v) for v in self.disjoint_with]
+
+        if self.children_are_mutually_disjoint is not None and not isinstance(self.children_are_mutually_disjoint, Bool):
+            self.children_are_mutually_disjoint = Bool(self.children_are_mutually_disjoint)
+
         if self.is_a is not None and not isinstance(self.is_a, ClassDefinitionName):
             self.is_a = ClassDefinitionName(self.is_a)
 
@@ -1989,6 +2011,7 @@ class UniqueKey(YAMLRoot):
     class_name: ClassVar[str] = "unique_key"
     class_model_uri: ClassVar[URIRef] = LINKML.UniqueKey
 
+    unique_key_name: Union[str, UniqueKeyUniqueKeyName] = None
     unique_key_slots: Union[Union[str, SlotDefinitionName], List[Union[str, SlotDefinitionName]]] = None
     extensions: Optional[Union[Dict[Union[str, ExtensionTag], Union[dict, Extension]], List[Union[dict, Extension]]]] = empty_dict()
     annotations: Optional[Union[Dict[Union[str, AnnotationTag], Union[dict, Annotation]], List[Union[dict, Annotation]]]] = empty_dict()
@@ -2009,6 +2032,11 @@ class UniqueKey(YAMLRoot):
     deprecated_element_has_possible_replacement: Optional[Union[str, URIorCURIE]] = None
 
     def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]):
+        if self._is_empty(self.unique_key_name):
+            self.MissingRequiredField("unique_key_name")
+        if not isinstance(self.unique_key_name, UniqueKeyUniqueKeyName):
+            self.unique_key_name = UniqueKeyUniqueKeyName(self.unique_key_name)
+
         if self._is_empty(self.unique_key_slots):
             self.MissingRequiredField("unique_key_slots")
         if not isinstance(self.unique_key_slots, list):
diff --git a/linkml_model/owl/meta.owl.ttl b/linkml_model/owl/meta.owl.ttl
index c4a355a7..44f74288 100644
--- a/linkml_model/owl/meta.owl.ttl
+++ b/linkml_model/owl/meta.owl.ttl
@@ -6,9 +6,11 @@
 @prefix oslc: <http://open-services.net/ns/core#> .
 @prefix owl: <http://www.w3.org/2002/07/owl#> .
 @prefix pav: <http://purl.org/pav/> .
+@prefix prov: <http://www.w3.org/ns/prov#> .
 @prefix qb: <http://purl.org/linked-data/cube#> .
 @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
 @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix schema1: <http://schema.org/> .
 @prefix sh1: <https://w3id.org/shacl/> .
 @prefix skos: <http://www.w3.org/2004/02/skos/core#> .
 @prefix swrl: <http://www.w3.org/2003/11/swrl#> .
@@ -44,11 +46,21 @@ linkml:meta a owl:Ontology ;
     dcterms:title "LinkML Schema Metamodel" ;
     pav:version "2.0.0" ;
     skos:definition "A metamodel for defining linked open data schemas" ;
-    linkml:generation_date "2021-12-28T23:39:22" ;
+    linkml:generation_date "2022-01-22T01:09:51" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:source_file "meta.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
-    linkml:source_file_size 51901 .
+    linkml:source_file_date "2022-01-22T01:07:33" ;
+    linkml:source_file_size 53722 .
+
+linkml:owned_by a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "owned_by" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:altLabel "owner",
+        "steward" ;
+    skos:closeMatch rdfs:isDefinedBy ;
+    skos:definition "agent that owns or is the steward of the element" .
 
 linkml:topValue a owl:DatatypeProperty ;
     rdfs:label "value" .
@@ -57,228 +69,101 @@ linkml:value_presence a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "value_presence" ;
     rdfs:domain linkml:SlotDefinition ;
-    rdfs:range <http://UNKNOWN.org/presence_enum> ;
+    rdfs:range linkml:PresenceEnum ;
     rdfs:subPropertyOf linkml:value_specification_constant ;
     skos:definition "if true then a value must be present (for lists there must be at least one value). If false then a value must be absent (for lists, must be empty)" ;
     skos:note "if set to true this has the same effect as required=true. In contrast, required=false allows a value to be present" .
 
-oslc:modifiedBy a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "modified_by" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Uriorcurie ;
-    skos:definition "agent that modified the element" .
-
-dcterms:conformsTo a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "conforms_to" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:String ;
-    skos:definition "An established standard to which the element conforms." .
-
-dcterms:license a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "license" ;
-    rdfs:domain linkml:SchemaDefinition ;
-    rdfs:range linkml:String ;
-    skos:definition "license for the schema" .
-
-bibo:status a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "status" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Uriorcurie ;
-    skos:definition "status of the element" ;
-    linkml:examples "Example(value='bibo:draft', description=None)" .
-
-pav:createdBy a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "created_by" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Uriorcurie ;
-    skos:definition "agent that created the element" .
-
-pav:createdOn a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "created_on" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Datetime ;
-    skos:definition "time at which the element was created" .
-
-pav:lastUpdatedOn a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "last_updated_on" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Datetime ;
-    skos:definition "time at which the element was last updated" .
-
-pav:version a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "version" ;
-    rdfs:domain linkml:SchemaDefinition ;
-    rdfs:range linkml:String ;
-    skos:definition "particular version of schema" .
-
-rdfs:subClassOf a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "subclass_of" ;
-    rdfs:domain linkml:ClassDefinition ;
-    rdfs:range linkml:Uriorcurie ;
-    skos:definition "rdfs:subClassOf to be emitted in OWL generation" .
-
-rdfs:subPropertyOf a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "subproperty_of" ;
-    rdfs:domain linkml:SlotDefinition ;
-    rdfs:range linkml:SlotDefinition ;
-    skos:definition "Ontology property which this slot is a subproperty of" .
-
-owl:inverseOf a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "inverse" ;
-    rdfs:domain linkml:SlotDefinition ;
-    rdfs:range linkml:SlotDefinition ;
-    skos:definition "indicates that any instance of d s r implies that there is also an instance of r s' d" .
-
-skos:broadMatch a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "broad mappings" ;
-    rdfs:range linkml:Uriorcurie ;
-    rdfs:subPropertyOf skos:mappingRelation ;
-    skos:definition "A list of terms from different schemas or terminology systems that have broader meaning." .
-
-skos:closeMatch a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "close mappings" ;
-    rdfs:range linkml:Uriorcurie ;
-    rdfs:subPropertyOf skos:mappingRelation ;
-    skos:definition "A list of terms from different schemas or terminology systems that have close meaning." .
-
-skos:exactMatch a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "exact mappings" ;
-    rdfs:range linkml:Uriorcurie ;
-    rdfs:subPropertyOf skos:mappingRelation ;
-    skos:definition "A list of terms from different schemas or terminology systems that have identical meaning." .
-
-skos:example a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "value" ;
-    rdfs:domain linkml:Example ;
-    rdfs:range linkml:String ;
-    skos:definition "example value" .
-
-skos:narrowMatch a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "narrow mappings" ;
-    rdfs:range linkml:Uriorcurie ;
-    rdfs:subPropertyOf skos:mappingRelation ;
-    skos:definition "A list of terms from different schemas or terminology systems that have narrower meaning." .
-
-skos:prefLabel a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "alias" ;
-    rdfs:domain linkml:SlotDefinition ;
-    rdfs:range linkml:String ;
-    skos:definition "the name used for a slot in the context of its owning class.  If present, this is used instead of the actual slot name." .
-
-skos:relatedMatch a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "related mappings" ;
-    rdfs:range linkml:Uriorcurie ;
-    rdfs:subPropertyOf skos:mappingRelation ;
-    skos:definition "A list of terms from different schemas or terminology systems that have related meaning." .
-
 linkml:ClassRule a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "class_rule" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:deprecated ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
+            owl:allValuesFrom linkml:AltDescription ;
+            owl:onProperty linkml:alt_descriptions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousClassExpression ;
-            owl:onProperty sh1:condition ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:elseconditions ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:todos ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Example ;
-            owl:onProperty linkml:examples ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
             owl:onProperty skos:note ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Annotation ;
-            owl:onProperty linkml:annotations ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty rdfs:seeAlso ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
             owl:onProperty linkml:bidirectional ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty sh1:order ],
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AltDescription ;
-            owl:onProperty linkml:alt_descriptions ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty skos:inScheme ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:imported_from ],
+            owl:onProperty linkml:deprecated ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:editorialNote ],
+            owl:allValuesFrom linkml:Extension ;
+            owl:onProperty linkml:extensions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:AnonymousClassExpression ;
             owl:onProperty linkml:postconditions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:open_world ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty dcterms:source ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Extension ;
-            owl:onProperty linkml:extensions ],
+            owl:allValuesFrom linkml:Example ;
+            owl:onProperty linkml:examples ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty sh1:deactivated ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty sh1:order ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
+            owl:allValuesFrom linkml:Annotation ;
+            owl:onProperty linkml:annotations ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty skos:definition ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:editorialNote ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty skos:inScheme ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:imported_from ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty sh1:deactivated ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
+            owl:onClass linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:elseconditions ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty dcterms:source ],
+            owl:onClass linkml:AnonymousClassExpression ;
+            owl:onProperty sh1:condition ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:open_world ],
         linkml:Annotatable,
         linkml:ClassLevelRule,
         linkml:CommonMetadata,
@@ -301,6 +186,7 @@ linkml:asymmetric a owl:ObjectProperty,
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
     rdfs:subPropertyOf linkml:relational_logical_characteristic ;
+    skos:closeMatch owl:AsymmetricProperty ;
     skos:definition "If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i" ;
     skos:note "asymmetry is the combination of antisymmetry and irreflexivity" .
 
@@ -325,6 +211,8 @@ linkml:bidirectional a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "bidirectional" ;
     rdfs:range linkml:Boolean ;
+    skos:altLabel "if and only if",
+        "iff" ;
     skos:definition "in addition to preconditions entailing postconditions, the postconditions entail the preconditions" .
 
 linkml:class_uri a owl:ObjectProperty,
@@ -332,6 +220,7 @@ linkml:class_uri a owl:ObjectProperty,
     rdfs:label "class_uri" ;
     rdfs:domain linkml:ClassDefinition ;
     rdfs:range linkml:Uriorcurie ;
+    skos:altLabel "public ID" ;
     skos:definition "URI of the class in an RDF environment" .
 
 linkml:classes a owl:ObjectProperty,
@@ -413,6 +302,7 @@ linkml:designates_type a owl:ObjectProperty,
     rdfs:label "designates_type" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
+    skos:altLabel "type designator" ;
     skos:definition "True means that the key slot(s) is used to determine the instantiation (types) relation between objects and a ClassDefinition" .
 
 linkml:domain a owl:ObjectProperty,
@@ -442,6 +332,7 @@ linkml:elseconditions a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "elseconditions" ;
     rdfs:range linkml:AnonymousClassExpression ;
+    skos:altLabel "else" ;
     skos:definition "an expression that must hold for an instance of the class, if the preconditions no not hold" .
 
 linkml:emit_prefixes a owl:ObjectProperty,
@@ -493,6 +384,10 @@ linkml:identifier a owl:ObjectProperty,
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
     rdfs:seeAlso "https://en.wikipedia.org/wiki/Identifier" ;
+    skos:altLabel "ID",
+        "UID",
+        "code",
+        "primary key" ;
     skos:definition "True means that the key slot(s) uniquely identify the container. There can be at most one identifier or key per container" ;
     skos:note "a given domain can have at most one identifier",
         "a key slot is automatically required.  Identifiers cannot be optional",
@@ -504,6 +399,7 @@ linkml:ifabsent a owl:ObjectProperty,
     rdfs:label "ifabsent" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:String ;
+    skos:closeMatch sh1:defaultValue ;
     skos:definition """function that provides a default value for the slot.  Possible values for this slot are defined in
 biolink.utils.ifabsent_functions.default_library:
   * [Tt]rue -- boolean True
@@ -557,6 +453,7 @@ linkml:irreflexive a owl:ObjectProperty,
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
     rdfs:subPropertyOf linkml:relational_logical_characteristic ;
+    skos:closeMatch owl:IrreflexiveProperty ;
     skos:definition "If s is irreflexive, then there exists no i such i.s=i" .
 
 linkml:is_class_field a owl:ObjectProperty,
@@ -571,6 +468,7 @@ linkml:is_grouping_slot a owl:ObjectProperty,
     rdfs:label "is_grouping_slot" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
+    skos:closeMatch sh1:PropertyGroup ;
     skos:definition "true if this slot is a grouping slot" .
 
 linkml:is_usage_slot a owl:ObjectProperty,
@@ -618,6 +516,7 @@ linkml:meaning a owl:ObjectProperty,
     rdfs:label "meaning" ;
     rdfs:domain linkml:PermissibleValue ;
     rdfs:range linkml:Uriorcurie ;
+    skos:altLabel "PV meaning" ;
     skos:definition "the value meaning (in the 11179 sense) of a permissible value" ;
     skos:editorialNote "we may want to change the range of this (and other) elements in the model to an entitydescription type construct" .
 
@@ -666,6 +565,10 @@ linkml:postconditions a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "postconditions" ;
     rdfs:range linkml:AnonymousClassExpression ;
+    skos:altLabel "consequents",
+        "head",
+        "then" ;
+    skos:closeMatch swrl:body ;
     skos:definition "an expression that must hold for an instance of the class, if the preconditions hold" .
 
 linkml:prefix_prefix a owl:ObjectProperty,
@@ -693,7 +596,7 @@ linkml:pv_formula a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "pv_formula" ;
     rdfs:domain linkml:EnumDefinition ;
-    rdfs:range <http://UNKNOWN.org/pv_formula_options> ;
+    rdfs:range linkml:PvFormulaOptions ;
     skos:definition "Defines the specific formula to be used to generate the permissible values." ;
     skos:note "code_set must be supplied for this to be valid",
         "you cannot have BOTH the permissible_values and permissible_value_formula tag" .
@@ -711,6 +614,7 @@ linkml:reflexive a owl:ObjectProperty,
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
     rdfs:subPropertyOf linkml:relational_logical_characteristic ;
+    skos:closeMatch owl:ReflexiveProperty ;
     skos:definition "If s is reflexive, then i.s=i for all instances i" ;
     skos:note "it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive" .
 
@@ -725,7 +629,8 @@ linkml:relational_role a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "relational_role" ;
     rdfs:domain linkml:SlotDefinition ;
-    rdfs:range <http://UNKNOWN.org/relational_role_enum> ;
+    rdfs:range linkml:RelationalRoleEnum ;
+    skos:altLabel "reification_role" ;
     skos:definition "the role a slot on a relationship class plays, for example, the subject, object or predicate roles" ;
     skos:note "in the context of RDF, this should be used for slots that can be modeled using the RDF reification vocabulary",
         "in the context of property graphs, this should be used on edge classes to indicate which slots represent the input and output nodes",
@@ -745,6 +650,7 @@ linkml:represents_relationship a owl:ObjectProperty,
     rdfs:range linkml:Boolean ;
     rdfs:seeAlso "https://patterns.dataincubator.org/book/qualified-relation.html",
         "rdf:Statement" ;
+    skos:altLabel "is_reified" ;
     skos:definition "true if this class represents a relationship rather than an entity" ;
     skos:note "in the context of Entity-Relationship (ER) modeling, this is used to state that a class models a relationship between entities, and should be drawn with a diamond",
         "in the context of RDF, this should be used when instances of the class are `rdf:Statement`s",
@@ -768,6 +674,7 @@ linkml:slot_uri a owl:ObjectProperty,
     rdfs:label "slot_uri" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Uriorcurie ;
+    skos:altLabel "public ID" ;
     skos:definition "predicate of this slot for semantic web application" .
 
 linkml:slot_usage a owl:ObjectProperty,
@@ -823,6 +730,7 @@ linkml:symmetric a owl:ObjectProperty,
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
     rdfs:subPropertyOf linkml:relational_logical_characteristic ;
+    skos:closeMatch owl:SymmetricProperty ;
     skos:definition "If s is symmetric, and i.s=v, then v.s=i" .
 
 linkml:tag a owl:ObjectProperty,
@@ -836,7 +744,8 @@ linkml:text a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "text" ;
     rdfs:domain linkml:PermissibleValue ;
-    rdfs:range linkml:String .
+    rdfs:range linkml:String ;
+    skos:altLabel "value" .
 
 linkml:transitive a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -844,6 +753,7 @@ linkml:transitive a owl:ObjectProperty,
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Boolean ;
     rdfs:subPropertyOf linkml:relational_logical_characteristic ;
+    skos:closeMatch owl:TransitiveProperty ;
     skos:definition "If s is transitive, and i.s=z, and s.s=j, then i.s=j" .
 
 linkml:traverse a owl:ObjectProperty,
@@ -885,12 +795,20 @@ linkml:union_of a owl:ObjectProperty,
     skos:definition "indicates that the domain class consists exactly of the members of the classes in the range" ;
     skos:editorialNote "this only applies in the OWL generation" .
 
+linkml:unique_key_name a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "unique_key_name" ;
+    rdfs:domain linkml:UniqueKey ;
+    rdfs:range linkml:String ;
+    skos:definition "name of the unique key" .
+
 linkml:unique_keys a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "unique_keys" ;
     rdfs:domain linkml:ClassDefinition ;
     rdfs:range linkml:UniqueKey ;
-    skos:definition "Set of unique keys for this slot" .
+    skos:definition "Set of unique keys for this slot" ;
+    skos:exactMatch owl:hasKey .
 
 linkml:uri a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -915,93 +833,236 @@ linkml:values_from a owl:ObjectProperty,
     rdfs:range linkml:Uriorcurie ;
     skos:definition "the identifier of a \"value set\" -- a set of identifiers that form the possible values for the range of a slot" .
 
-sh1:condition a owl:ObjectProperty,
+sh1:rule a owl:ObjectProperty,
+        linkml:SlotDefinition .
+
+oslc:modifiedBy a owl:ObjectProperty,
         linkml:SlotDefinition ;
-    rdfs:label "preconditions" ;
-    rdfs:range linkml:AnonymousClassExpression ;
-    skos:definition "an expression that must hold in order for the rule to be applicable to an instance" .
+    rdfs:label "modified_by" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:definition "agent that modified the element" ;
+    skos:exactMatch oslc:modifiedBy .
 
-sh1:deactivated a owl:ObjectProperty,
+dcterms:conformsTo a owl:ObjectProperty,
         linkml:SlotDefinition ;
-    rdfs:label "deactivated" ;
-    rdfs:range linkml:Boolean ;
-    skos:definition "a deactivated rule is not executed by the rules engine" .
+    rdfs:label "conforms_to" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:String ;
+    skos:definition "An established standard to which the element conforms." ;
+    skos:exactMatch dcterms:conformsTo .
 
-sh1:group a owl:ObjectProperty,
+dcterms:license a owl:ObjectProperty,
         linkml:SlotDefinition ;
-    rdfs:label "slot_group" ;
-    rdfs:domain linkml:SlotDefinition ;
-    rdfs:range linkml:SlotDefinition ;
-    skos:definition "allows for grouping of related slots into a grouping slot that serves the role of a group" .
+    rdfs:label "license" ;
+    rdfs:domain linkml:SchemaDefinition ;
+    rdfs:range linkml:String ;
+    skos:definition "license for the schema" ;
+    skos:exactMatch dcterms:license .
 
-sh1:rule a owl:ObjectProperty,
-        linkml:SlotDefinition .
+bibo:status a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "status" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:altLabel "workflow status" ;
+    skos:definition "status of the element" ;
+    skos:exactMatch bibo:status ;
+    linkml:examples "Example(value='bibo:draft', description=None)" .
 
-rdfs:label a owl:ObjectProperty,
-        linkml:SlotDefinition .
+pav:createdBy a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "created_by" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:definition "agent that created the element" ;
+    skos:exactMatch pav:createdBy .
 
-linkml:AnonymousExpression a owl:Class,
-        linkml:ClassDefinition ;
-    rdfs:label "anonymous_expression" ;
-    rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Extension ;
-            owl:onProperty linkml:extensions ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:note ],
+pav:createdOn a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "created_on" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Datetime ;
+    skos:definition "time at which the element was created" ;
+    skos:exactMatch pav:createdOn .
+
+pav:lastUpdatedOn a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "last_updated_on" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Datetime ;
+    skos:definition "time at which the element was last updated" ;
+    skos:exactMatch pav:lastUpdatedOn .
+
+pav:version a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "version" ;
+    rdfs:domain linkml:SchemaDefinition ;
+    rdfs:range linkml:String ;
+    skos:definition "particular version of schema" ;
+    skos:exactMatch pav:version,
+        schema1:schemaVersion .
+
+rdf:object a owl:Class,
+        linkml:RelationalRoleEnum ;
+    rdfs:label "OBJECT" ;
+    skos:definition "a slot with this role connects a relationship to its object/target node" .
+
+rdf:predicate a owl:Class,
+        linkml:RelationalRoleEnum ;
+    rdfs:label "PREDICATE" ;
+    skos:definition "a slot with this role connects a relationship to its predicate/property" .
+
+rdf:subject a owl:Class,
+        linkml:RelationalRoleEnum ;
+    rdfs:label "SUBJECT" ;
+    skos:definition "a slot with this role connects a relationship to its subject/source node" .
+
+rdfs:label a owl:ObjectProperty,
+        linkml:SlotDefinition .
+
+rdfs:subClassOf a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "subclass_of" ;
+    rdfs:domain linkml:ClassDefinition ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:definition "rdfs:subClassOf to be emitted in OWL generation" ;
+    skos:exactMatch rdfs:subClassOf .
+
+rdfs:subPropertyOf a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "subproperty_of" ;
+    rdfs:domain linkml:SlotDefinition ;
+    rdfs:range linkml:SlotDefinition ;
+    skos:definition "Ontology property which this slot is a subproperty of" ;
+    skos:exactMatch rdfs:subPropertyOf .
+
+owl:inverseOf a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "inverse" ;
+    rdfs:domain linkml:SlotDefinition ;
+    rdfs:range linkml:SlotDefinition ;
+    skos:definition "indicates that any instance of d s r implies that there is also an instance of r s' d" ;
+    skos:exactMatch owl:inverseOf .
+
+skos:broadMatch a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "broad mappings" ;
+    rdfs:range linkml:Uriorcurie ;
+    rdfs:subPropertyOf skos:mappingRelation ;
+    skos:definition "A list of terms from different schemas or terminology systems that have broader meaning." ;
+    skos:exactMatch skos:broadMatch .
+
+skos:closeMatch a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "close mappings" ;
+    rdfs:range linkml:Uriorcurie ;
+    rdfs:subPropertyOf skos:mappingRelation ;
+    skos:definition "A list of terms from different schemas or terminology systems that have close meaning." ;
+    skos:exactMatch skos:closeMatch .
+
+skos:exactMatch a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "exact mappings" ;
+    rdfs:range linkml:Uriorcurie ;
+    rdfs:subPropertyOf skos:mappingRelation ;
+    skos:definition "A list of terms from different schemas or terminology systems that have identical meaning." ;
+    skos:exactMatch skos:exactMatch .
+
+skos:example a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "value" ;
+    rdfs:domain linkml:Example ;
+    rdfs:range linkml:String ;
+    skos:definition "example value" ;
+    skos:exactMatch skos:example .
+
+skos:narrowMatch a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "narrow mappings" ;
+    rdfs:range linkml:Uriorcurie ;
+    rdfs:subPropertyOf skos:mappingRelation ;
+    skos:definition "A list of terms from different schemas or terminology systems that have narrower meaning." ;
+    skos:exactMatch skos:narrowMatch .
+
+skos:prefLabel a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "alias" ;
+    rdfs:domain linkml:SlotDefinition ;
+    rdfs:range linkml:String ;
+    skos:definition "the name used for a slot in the context of its owning class.  If present, this is used instead of the actual slot name." ;
+    skos:exactMatch skos:prefLabel .
+
+skos:relatedMatch a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "related mappings" ;
+    rdfs:range linkml:Uriorcurie ;
+    rdfs:subPropertyOf skos:mappingRelation ;
+    skos:definition "A list of terms from different schemas or terminology systems that have related meaning." ;
+    skos:exactMatch skos:relatedMatch .
+
+linkml:AnonymousExpression a owl:Class,
+        linkml:ClassDefinition ;
+    rdfs:label "anonymous_expression" ;
+    rdfs:subClassOf [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
+            owl:onProperty linkml:imported_from ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:editorialNote ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Example ;
+            owl:onProperty linkml:examples ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AltDescription ;
             owl:onProperty linkml:alt_descriptions ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:deprecated ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:todos ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Extension ;
+            owl:onProperty linkml:extensions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
+            owl:onClass linkml:String ;
+            owl:onProperty skos:definition ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:note ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:imported_from ],
+            owl:onProperty linkml:deprecated ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Annotation ;
-            owl:onProperty linkml:annotations ],
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uri ;
             owl:onProperty skos:inScheme ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:definition ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Example ;
-            owl:onProperty linkml:examples ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty rdfs:seeAlso ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
             owl:onProperty dcterms:source ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:editorialNote ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
+            owl:allValuesFrom linkml:Annotation ;
+            owl:onProperty linkml:annotations ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         linkml:Annotatable,
         linkml:CommonMetadata,
         linkml:Expression,
@@ -1012,47 +1073,99 @@ linkml:ClassLevelRule a owl:Class,
     rdfs:label "class_level_rule" ;
     skos:definition "A rule that is applied to classes" .
 
+<https://w3id.org/linkml/PresenceEnum#ABSENT> a owl:Class,
+        linkml:PresenceEnum ;
+    rdfs:label "ABSENT" .
+
+<https://w3id.org/linkml/PresenceEnum#PRESENT> a owl:Class,
+        linkml:PresenceEnum ;
+    rdfs:label "PRESENT" .
+
+<https://w3id.org/linkml/PresenceEnum#UNCOMMITTED> a owl:Class,
+        linkml:PresenceEnum ;
+    rdfs:label "UNCOMMITTED" .
+
+<https://w3id.org/linkml/PvFormulaOptions#CODE> a owl:Class,
+        linkml:PvFormulaOptions ;
+    rdfs:label "CODE" ;
+    skos:definition "The permissible values are the set of possible codes in the code set" .
+
+<https://w3id.org/linkml/PvFormulaOptions#CURIE> a owl:Class,
+        linkml:PvFormulaOptions ;
+    rdfs:label "CURIE" ;
+    skos:definition "The permissible values are the set of CURIES in the code set" .
+
+<https://w3id.org/linkml/PvFormulaOptions#FHIR_CODING> a owl:Class,
+        linkml:PvFormulaOptions ;
+    rdfs:label "FHIR_CODING" ;
+    skos:definition "The permissible values are the set of FHIR coding elements derived from the code set" .
+
+<https://w3id.org/linkml/PvFormulaOptions#URI> a owl:Class,
+        linkml:PvFormulaOptions ;
+    rdfs:label "URI" ;
+    skos:definition "The permissible values are the set of code URIs in the code set" .
+
+<https://w3id.org/linkml/RelationalRoleEnum#NODE> a owl:Class,
+        linkml:RelationalRoleEnum ;
+    rdfs:label "NODE" ;
+    skos:definition "a slot with this role connects a symmetric relationship to a node that represents either subject or object node" .
+
+<https://w3id.org/linkml/RelationalRoleEnum#OTHER_ROLE> a owl:Class,
+        linkml:RelationalRoleEnum ;
+    rdfs:label "OTHER_ROLE" ;
+    skos:definition "a slot with this role connects a relationship to a node that is not subject/object/predicate" .
+
 linkml:TypeExpression a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "type_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:none_of ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:exactly_one_of ],
-        [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
             owl:onProperty linkml:minimum_value ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:pattern ],
+            owl:onProperty linkml:equals_string ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:equals_number ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
             owl:onProperty linkml:equals_string_in ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:equals_number ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:pattern ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
             owl:onProperty linkml:maximum_value ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousTypeExpression ;
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
             owl:onProperty linkml:all_of ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_string ],
+            owl:allValuesFrom linkml:AnonymousTypeExpression ;
+            owl:onProperty linkml:none_of ],
         linkml:Expression,
         linkml:mixin .
 
+linkml:children_are_mutually_disjoint a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "children_are_mutually_disjoint" ;
+    rdfs:domain linkml:Definition ;
+    rdfs:range linkml:Boolean ;
+    skos:definition "If true then all direct is_a children are mutually disjoint and share no instances in common" .
+
+linkml:disjoint_with a owl:ObjectProperty,
+        linkml:SlotDefinition .
+
 linkml:slot_names_unique a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "slot_names_unique" ;
@@ -1077,11 +1190,31 @@ linkml:unique_key_slots a owl:ObjectProperty,
     rdfs:range linkml:SlotDefinition ;
     skos:definition "list of slot names that form a key" .
 
-sh1:order a owl:ObjectProperty,
+sh1:condition a owl:ObjectProperty,
         linkml:SlotDefinition ;
-    rdfs:label "precedence" ;
-    rdfs:range linkml:Integer ;
-    skos:definition "the relative order in which the element occurs" .
+    rdfs:label "preconditions" ;
+    rdfs:range linkml:AnonymousClassExpression ;
+    skos:altLabel "antecedents",
+        "body",
+        "if" ;
+    skos:closeMatch swrl:body ;
+    skos:definition "an expression that must hold in order for the rule to be applicable to an instance" ;
+    skos:exactMatch sh1:condition .
+
+sh1:deactivated a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "deactivated" ;
+    rdfs:range linkml:Boolean ;
+    skos:definition "a deactivated rule is not executed by the rules engine" ;
+    skos:exactMatch sh1:deactivated .
+
+sh1:group a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "slot_group" ;
+    rdfs:domain linkml:SlotDefinition ;
+    rdfs:range linkml:SlotDefinition ;
+    skos:definition "allows for grouping of related slots into a grouping slot that serves the role of a group" ;
+    skos:exactMatch sh1:group .
 
 skos:altLabel a owl:ObjectProperty,
         linkml:SlotDefinition .
@@ -1091,7 +1224,7 @@ linkml:ClassExpression a owl:Class,
     rdfs:label "class_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
             owl:onProperty linkml:all_of ],
@@ -1103,7 +1236,7 @@ linkml:ClassExpression a owl:Class,
             owl:onProperty linkml:slot_conditions ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:exactly_one_of ],
+            owl:onProperty linkml:any_of ],
         linkml:mixin ;
     skos:definition "A boolean expression that can be used to dynamically determine membership of a class" .
 
@@ -1111,12 +1244,9 @@ linkml:SlotExpression a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "slot_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:any_of ],
-        [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:pattern ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:maximum_cardinality ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
@@ -1124,14 +1254,7 @@ linkml:SlotExpression a owl:Class,
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
-            owl:onProperty linkml:minimum_value ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:equals_string_in ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:has_member ],
+            owl:onProperty linkml:equals_number ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:SlotDefinition ;
             owl:onProperty linkml:all_members ],
@@ -1139,123 +1262,60 @@ linkml:SlotExpression a owl:Class,
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Element ;
             owl:onProperty linkml:range ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:equals_number ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_expression ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:maximum_value ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:exactly_one_of ],
+            owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_string ],
+            owl:onProperty linkml:pattern ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:recommended ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:equals_string_in ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
             owl:onProperty linkml:required ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:none_of ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:all_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:range_expression ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:recommended ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
-            owl:onProperty linkml:maximum_cardinality ],
-        linkml:Expression,
-        linkml:mixin ;
-    skos:definition "an expression that constrains the range of values a slot can take" .
-
-linkml:UniqueKey a owl:Class,
-        linkml:ClassDefinition ;
-    rdfs:label "unique_key" ;
-    rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:definition ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty dcterms:source ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Annotation ;
-            owl:onProperty linkml:annotations ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:imported_from ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Extension ;
-            owl:onProperty linkml:extensions ],
+            owl:onProperty linkml:maximum_value ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Example ;
-            owl:onProperty linkml:examples ],
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
+            owl:onProperty linkml:equals_string ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
-        [ a owl:Class ;
-            owl:intersectionOf ( [ a owl:Restriction ;
-                        owl:allValuesFrom linkml:SlotDefinition ;
-                        owl:onProperty linkml:unique_key_slots ] [ a owl:Restriction ;
-                        owl:onProperty linkml:unique_key_slots ;
-                        owl:someValuesFrom linkml:SlotDefinition ] ) ],
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:all_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
+            owl:onClass linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:range_expression ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:deprecated ],
+            owl:onProperty linkml:equals_expression ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty skos:inScheme ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AltDescription ;
-            owl:onProperty linkml:alt_descriptions ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:editorialNote ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:minimum_value ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:note ],
-        linkml:Annotatable,
-        linkml:CommonMetadata,
-        linkml:Extensible ;
-    skos:definition "a collection of slots whose values uniquely identify an instance of a class" .
+            owl:onClass linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:has_member ],
+        linkml:Expression,
+        linkml:mixin ;
+    skos:definition "an expression that constrains the range of values a slot can take" .
 
 linkml:all_members a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -1312,6 +1372,7 @@ linkml:range a owl:ObjectProperty,
     rdfs:label "range" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Element ;
+    skos:altLabel "value domain" ;
     skos:definition """defines the type of the object of the slot.  Given the following slot definition
   S1:
     domain: C1
@@ -1347,18 +1408,111 @@ linkml:slot_conditions a owl:ObjectProperty,
     rdfs:range linkml:SlotDefinition ;
     skos:definition "the redefinition of a slot in the context of the containing class definition." .
 
+sh1:order a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "precedence" ;
+    rdfs:range linkml:Integer ;
+    skos:definition "the relative order in which the element occurs" ;
+    skos:exactMatch sh1:order .
+
 linkml:LocalName a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "local_name" ;
     rdfs:subClassOf [ a owl:Restriction ;
+            owl:onClass linkml:String ;
+            owl:onProperty skos:altLabel ;
+            owl:qualifiedCardinality 1 ],
+        [ a owl:Restriction ;
             owl:onClass linkml:Ncname ;
             owl:onProperty linkml:local_name_source ;
+            owl:qualifiedCardinality 1 ] ;
+    skos:definition "an attributed label" .
+
+linkml:PresenceEnum a owl:Class,
+        linkml:EnumDefinition ;
+    rdfs:label "presence_enum" ;
+    owl:unionOf ( <https://w3id.org/linkml/PresenceEnum#UNCOMMITTED> <https://w3id.org/linkml/PresenceEnum#PRESENT> <https://w3id.org/linkml/PresenceEnum#ABSENT> ) ;
+    skos:definition "enumeration of conditions by which a slot value should be set" ;
+    linkml:permissible_values <https://w3id.org/linkml/PresenceEnum#ABSENT>,
+        <https://w3id.org/linkml/PresenceEnum#PRESENT>,
+        <https://w3id.org/linkml/PresenceEnum#UNCOMMITTED> .
+
+linkml:UniqueKey a owl:Class,
+        linkml:ClassDefinition ;
+    rdfs:label "unique_key" ;
+    rdfs:subClassOf [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Extension ;
+            owl:onProperty linkml:extensions ],
+        [ a owl:Restriction ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:unique_key_name ;
             owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty skos:altLabel ;
-            owl:qualifiedCardinality 1 ] ;
-    skos:definition "an attributed label" .
+            owl:onProperty skos:definition ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:note ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty skos:inScheme ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:title ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AltDescription ;
+            owl:onProperty linkml:alt_descriptions ],
+        [ a owl:Class ;
+            owl:intersectionOf ( [ a owl:Restriction ;
+                        owl:allValuesFrom linkml:SlotDefinition ;
+                        owl:onProperty linkml:unique_key_slots ] [ a owl:Restriction ;
+                        owl:onProperty linkml:unique_key_slots ;
+                        owl:someValuesFrom linkml:SlotDefinition ] ) ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Example ;
+            owl:onProperty linkml:examples ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:imported_from ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:todos ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty dcterms:source ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty rdfs:seeAlso ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Annotation ;
+            owl:onProperty linkml:annotations ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:deprecated ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:editorialNote ],
+        linkml:Annotatable,
+        linkml:CommonMetadata,
+        linkml:Extensible ;
+    skos:definition "a collection of slots whose values uniquely identify an instance of a class" .
 
 linkml:list_value_specification_constant a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -1381,24 +1535,18 @@ linkml:Prefix a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "prefix" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:onClass linkml:Ncname ;
-            owl:onProperty linkml:prefix_prefix ;
-            owl:qualifiedCardinality 1 ],
-        [ a owl:Restriction ;
             owl:onClass linkml:Uri ;
             owl:onProperty linkml:prefix_reference ;
+            owl:qualifiedCardinality 1 ],
+        [ a owl:Restriction ;
+            owl:onClass linkml:Ncname ;
+            owl:onProperty linkml:prefix_prefix ;
             owl:qualifiedCardinality 1 ] ;
     skos:definition "prefix URI tuple" .
 
 linkml:is_a a owl:ObjectProperty,
         linkml:SlotDefinition .
 
-skos:mappingRelation a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "mappings" ;
-    rdfs:range linkml:Uriorcurie ;
-    skos:definition "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." .
-
 linkml:Expression a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "expression" ;
@@ -1409,31 +1557,57 @@ linkml:PermissibleValue a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "permissible_value" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
+            owl:allValuesFrom linkml:Extension ;
+            owl:onProperty linkml:extensions ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:todos ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:PermissibleValue ;
+            owl:onProperty linkml:mixins ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty skos:definition ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Annotation ;
+            owl:onProperty linkml:annotations ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AltDescription ;
+            owl:onProperty linkml:alt_descriptions ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty rdfs:seeAlso ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty skos:inScheme ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Example ;
             owl:onProperty linkml:examples ],
+        [ a owl:Restriction ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:text ;
+            owl:qualifiedCardinality 1 ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:PermissibleValue ;
+            owl:onProperty linkml:is_a ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty linkml:imported_from ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
             owl:onProperty linkml:deprecated_element_has_exact_replacement ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AltDescription ;
-            owl:onProperty linkml:alt_descriptions ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:editorialNote ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Annotation ;
-            owl:onProperty linkml:annotations ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Extension ;
-            owl:onProperty linkml:extensions ],
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
             owl:onProperty skos:note ],
@@ -1441,18 +1615,6 @@ linkml:PermissibleValue a owl:Class,
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty linkml:deprecated ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty skos:inScheme ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:definition ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
@@ -1461,32 +1623,31 @@ linkml:PermissibleValue a owl:Class,
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
             owl:onProperty dcterms:source ],
-        [ a owl:Restriction ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:text ;
-            owl:qualifiedCardinality 1 ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:PermissibleValue ;
-            owl:onProperty linkml:is_a ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:PermissibleValue ;
-            owl:onProperty linkml:mixins ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:editorialNote ],
         linkml:Annotatable,
         linkml:CommonMetadata,
         linkml:Extensible ;
+    skos:altLabel "PV" ;
     skos:definition "a permissible value, accompanied by intended text and an optional mapping to a concept URI" .
 
+linkml:PvFormulaOptions a owl:Class,
+        linkml:EnumDefinition ;
+    rdfs:label "pv_formula_options" ;
+    owl:unionOf ( <https://w3id.org/linkml/PvFormulaOptions#CODE> <https://w3id.org/linkml/PvFormulaOptions#CURIE> <https://w3id.org/linkml/PvFormulaOptions#URI> <https://w3id.org/linkml/PvFormulaOptions#FHIR_CODING> ) ;
+    skos:definition "The formula used to generate the set of permissible values from the code_set values" ;
+    skos:editorialNote "{'Q1': 'Do we need a CURIEorURIE entry?'}",
+        "{'Q2': 'Who defines the namespaces for the CURIE form?'}" ;
+    linkml:permissible_values <https://w3id.org/linkml/PvFormulaOptions#CODE>,
+        <https://w3id.org/linkml/PvFormulaOptions#CURIE>,
+        <https://w3id.org/linkml/PvFormulaOptions#FHIR_CODING>,
+        <https://w3id.org/linkml/PvFormulaOptions#URI> .
+
 linkml:equals_number a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "equals_number" ;
@@ -1513,6 +1674,7 @@ linkml:maximum_value a owl:ObjectProperty,
     rdfs:label "maximum_value" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Integer ;
+    skos:altLabel "high value" ;
     skos:definition "for slots with ranges of type number, the value must be equal to or lowe than this" .
 
 linkml:minimum_value a owl:ObjectProperty,
@@ -1520,6 +1682,7 @@ linkml:minimum_value a owl:ObjectProperty,
     rdfs:label "minimum_value" ;
     rdfs:domain linkml:SlotDefinition ;
     rdfs:range linkml:Integer ;
+    skos:altLabel "low value" ;
     skos:definition "for slots with ranges of type number, the value must be equal to or higher than this" .
 
 linkml:pattern a owl:ObjectProperty,
@@ -1542,250 +1705,189 @@ linkml:value_specification_constant a owl:ObjectProperty,
     rdfs:range linkml:String ;
     skos:definition "Grouping for metamodel slots that constrain the a slot value to equal a specified constant" .
 
-dcterms:source a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "source" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Uriorcurie ;
-    skos:definition "A related resource from which the element is derived." ;
-    skos:note "The described resource may be derived from the related resource in whole or in part" .
-
-dcterms:title a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "title" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:String ;
-    skos:definition "the official title of the element" .
-
-OIO:inSubset a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "in_subset" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:SubsetDefinition ;
-    skos:definition "used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph)" .
-
-rdfs:seeAlso a owl:ObjectProperty,
+skos:mappingRelation a owl:ObjectProperty,
         linkml:SlotDefinition ;
-    rdfs:label "see_also" ;
-    rdfs:domain linkml:Element ;
+    rdfs:label "mappings" ;
     rdfs:range linkml:Uriorcurie ;
-    skos:definition "a reference" .
-
-skos:definition a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "description" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:String ;
-    skos:definition "a description of the element's purpose and use" .
-
-skos:editorialNote a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "notes" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:String ;
-    skos:definition "editorial notes about an element intended for internal consumption" .
-
-skos:inScheme a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "from_schema" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:Uri ;
-    skos:definition "id of the schema that defined the element" ;
-    skos:editorialNote "A stronger model would be range schema_definition, but this doesn't address the import model" .
-
-skos:note a owl:ObjectProperty,
-        linkml:SlotDefinition ;
-    rdfs:label "comments" ;
-    rdfs:domain linkml:Element ;
-    rdfs:range linkml:String ;
-    skos:definition "notes and comments about an element intended for external consumption" .
+    skos:altLabel "alternate identifiers",
+        "alternate ids",
+        "identifiers",
+        "xrefs" ;
+    skos:definition "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." ;
+    skos:exactMatch skos:mappingRelation .
 
 linkml:CommonMetadata a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "common_metadata" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:editorialNote ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty rdfs:seeAlso ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:deprecated ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty skos:inScheme ],
+            owl:onProperty linkml:imported_from ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Example ;
-            owl:onProperty linkml:examples ],
+            owl:onProperty skos:definition ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:note ],
+            owl:onProperty linkml:todos ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AltDescription ;
             owl:onProperty linkml:alt_descriptions ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty dcterms:source ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:definition ],
+            owl:onClass linkml:Uri ;
+            owl:onProperty skos:inScheme ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
-            owl:onProperty dcterms:source ],
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:imported_from ],
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:note ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
             owl:onProperty linkml:deprecated_element_has_exact_replacement ],
-        linkml:mixin ;
-    skos:definition "Generic metadata shared across definitions" .
-
-linkml:EnumDefinition a owl:Class,
-        linkml:ClassDefinition ;
-    rdfs:label "enum_definition" ;
-    rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:code_set_tag ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:code_set_version ],
+            owl:onProperty linkml:deprecated ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:code_set ],
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:PermissibleValue ;
-            owl:onProperty linkml:permissible_values ],
+            owl:allValuesFrom linkml:Example ;
+            owl:onProperty linkml:examples ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass <http://UNKNOWN.org/pv_formula_options> ;
-            owl:onProperty linkml:pv_formula ],
-        linkml:Element ;
-    skos:closeMatch qb:HierarchicalCodeList ;
-    skos:definition "List of values that constrain the range of a slot" .
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:editorialNote ],
+        linkml:mixin ;
+    skos:definition "Generic metadata shared across definitions" .
 
 linkml:PathExpression a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "path_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
+            owl:onClass linkml:SlotDefinition ;
+            owl:onProperty linkml:traverse ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty skos:inScheme ],
+            owl:allValuesFrom linkml:Extension ;
+            owl:onProperty linkml:extensions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty skos:definition ],
+            owl:onProperty linkml:deprecated ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Example ;
+            owl:onProperty linkml:examples ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:reversed ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:PathExpression ;
             owl:onProperty linkml:any_of ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:note ],
+            owl:onProperty linkml:todos ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AltDescription ;
+            owl:onProperty linkml:alt_descriptions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:PathExpression ;
-            owl:onProperty linkml:followed_by ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty linkml:imported_from ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:PathExpression ;
+            owl:onProperty linkml:followed_by ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:range_expression ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
-            owl:onProperty dcterms:source ],
+            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AltDescription ;
-            owl:onProperty linkml:alt_descriptions ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty skos:inScheme ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Annotation ;
-            owl:onProperty linkml:annotations ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty dcterms:source ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:PathExpression ;
             owl:onProperty linkml:all_of ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Example ;
-            owl:onProperty linkml:examples ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Extension ;
-            owl:onProperty linkml:extensions ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
+            owl:onProperty skos:editorialNote ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:deprecated ],
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:PathExpression ;
             owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:editorialNote ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:SlotDefinition ;
-            owl:onProperty linkml:traverse ],
+            owl:allValuesFrom linkml:Annotation ;
+            owl:onProperty linkml:annotations ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:PathExpression ;
             owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:reversed ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty rdfs:seeAlso ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
+            owl:onProperty skos:definition ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:range_expression ],
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:note ],
         linkml:Annotatable,
         linkml:CommonMetadata,
         linkml:Expression,
         linkml:Extensible ;
     skos:definition "An expression that describes an abstract path from an object to another through a sequence of slot lookups" .
 
+linkml:RelationalRoleEnum a owl:Class,
+        linkml:EnumDefinition ;
+    rdfs:label "relational_role_enum" ;
+    owl:unionOf ( rdf:subject rdf:object rdf:predicate <https://w3id.org/linkml/RelationalRoleEnum#NODE> <https://w3id.org/linkml/RelationalRoleEnum#OTHER_ROLE> ) ;
+    skos:definition "enumeration of roles a slot on a relationship class can play" ;
+    linkml:permissible_values rdf:object,
+        rdf:predicate,
+        rdf:subject,
+        <https://w3id.org/linkml/RelationalRoleEnum#NODE>,
+        <https://w3id.org/linkml/RelationalRoleEnum#OTHER_ROLE> .
+
 linkml:alt_descriptions a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "alt_descriptions" ;
     rdfs:domain linkml:Element ;
-    rdfs:range linkml:AltDescription .
+    rdfs:range linkml:AltDescription ;
+    skos:altLabel "alternate definitions" .
 
 linkml:deprecated a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -1798,13 +1900,15 @@ linkml:deprecated_element_has_exact_replacement a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "deprecated element has exact replacement" ;
     rdfs:range linkml:Uriorcurie ;
-    skos:definition "When an element is deprecated, it can be automatically replaced by this uri or curie" .
+    skos:definition "When an element is deprecated, it can be automatically replaced by this uri or curie" ;
+    skos:exactMatch IAO:0100001 .
 
 linkml:deprecated_element_has_possible_replacement a owl:ObjectProperty,
         linkml:SlotDefinition ;
     rdfs:label "deprecated element has possible replacement" ;
     rdfs:range linkml:Uriorcurie ;
-    skos:definition "When an element is deprecated, it can be potentially replaced by this uri or curie" .
+    skos:definition "When an element is deprecated, it can be potentially replaced by this uri or curie" ;
+    skos:exactMatch OIO:consider .
 
 linkml:examples a owl:ObjectProperty,
         linkml:SlotDefinition ;
@@ -1827,6 +1931,78 @@ linkml:todos a owl:ObjectProperty,
     rdfs:range linkml:String ;
     skos:definition "Outstanding issue that needs resolution" .
 
+dcterms:source a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "source" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:altLabel "derived from",
+        "origin" ;
+    skos:closeMatch schema1:isBasedOn,
+        prov:wasDerivedFrom ;
+    skos:definition "A related resource from which the element is derived." ;
+    skos:exactMatch dcterms:source ;
+    skos:note "The described resource may be derived from the related resource in whole or in part" .
+
+dcterms:title a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "title" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:String ;
+    skos:altLabel "long name" ;
+    skos:definition "the official title of the element" ;
+    skos:exactMatch dcterms:title .
+
+OIO:inSubset a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "in_subset" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:SubsetDefinition ;
+    skos:definition "used to indicate membership of a term in a defined subset of terms used for a particular domain or application (e.g. the translator_minimal subset holding the minimal set of predicates used in a translator knowledge graph)" ;
+    skos:exactMatch OIO:inSubset .
+
+rdfs:seeAlso a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "see_also" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uriorcurie ;
+    skos:definition "a reference" ;
+    skos:exactMatch rdfs:seeAlso .
+
+skos:definition a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "description" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:String ;
+    skos:altLabel "definition" ;
+    skos:definition "a description of the element's purpose and use" ;
+    skos:exactMatch skos:definition .
+
+skos:editorialNote a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "notes" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:String ;
+    skos:definition "editorial notes about an element intended for internal consumption" ;
+    skos:exactMatch skos:editorialNote .
+
+skos:inScheme a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "from_schema" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:Uri ;
+    skos:definition "id of the schema that defined the element" ;
+    skos:editorialNote "A stronger model would be range schema_definition, but this doesn't address the import model" ;
+    skos:exactMatch skos:inScheme .
+
+skos:note a owl:ObjectProperty,
+        linkml:SlotDefinition ;
+    rdfs:label "comments" ;
+    rdfs:domain linkml:Element ;
+    rdfs:range linkml:String ;
+    skos:definition "notes and comments about an element intended for external consumption" ;
+    skos:exactMatch skos:note .
+
 linkml:Extensible a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "extensible" ;
@@ -1850,6 +2026,7 @@ linkml:mixin a owl:ObjectProperty,
     rdfs:domain linkml:Definition ;
     rdfs:range linkml:Boolean ;
     rdfs:seeAlso "https://en.wikipedia.org/wiki/Mixin" ;
+    skos:altLabel "trait" ;
     skos:definition "this slot or class can only be used as a mixin." .
 
 linkml:AltDescription a owl:Class,
@@ -1891,6 +2068,32 @@ linkml:extensions a owl:ObjectProperty,
     rdfs:range linkml:Extension ;
     skos:definition "a tag/text tuple attached to an arbitrary element" .
 
+linkml:EnumDefinition a owl:Class,
+        linkml:ClassDefinition ;
+    rdfs:label "enum_definition" ;
+    rdfs:subClassOf [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:PvFormulaOptions ;
+            owl:onProperty linkml:pv_formula ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:code_set ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:code_set_tag ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:PermissibleValue ;
+            owl:onProperty linkml:permissible_values ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:code_set_version ],
+        linkml:Element ;
+    skos:closeMatch qb:HierarchicalCodeList ;
+    skos:definition "List of values that constrain the range of a slot" .
+
 linkml:Example a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "example" ;
@@ -1914,56 +2117,56 @@ linkml:TypeDefinition a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "type_definition" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:maximum_value ],
+            owl:allValuesFrom linkml:AnonymousTypeExpression ;
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty linkml:base ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
             owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:uri ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:equals_number ],
+            owl:allValuesFrom linkml:AnonymousTypeExpression ;
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_string ],
+            owl:onProperty linkml:repr ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:equals_string_in ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
             owl:onProperty linkml:all_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:pattern ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:maximum_value ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:repr ],
+            owl:onClass linkml:TypeDefinition ;
+            owl:onProperty linkml:typeof ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:minimum_value ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:TypeDefinition ;
-            owl:onProperty linkml:typeof ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:uri ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:equals_string_in ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:equals_string ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
-            owl:onProperty linkml:minimum_value ],
+            owl:onProperty linkml:equals_number ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:pattern ],
         linkml:Element,
         linkml:TypeExpression ;
     skos:definition "A data type definition." .
@@ -1984,55 +2187,55 @@ linkml:AnonymousTypeExpression a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "anonymous_type_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:any_of ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:maximum_value ],
-        [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
-            owl:onProperty linkml:minimum_value ],
+            owl:onProperty linkml:equals_number ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:exactly_one_of ],
+            owl:onProperty linkml:all_of ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:pattern ],
+            owl:allValuesFrom linkml:AnonymousTypeExpression ;
+            owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
-            owl:onProperty linkml:equals_number ],
+            owl:onProperty linkml:minimum_value ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:all_of ],
+            owl:onProperty linkml:any_of ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:equals_string_in ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty linkml:equals_string ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:equals_string_in ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:pattern ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:maximum_value ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousTypeExpression ;
-            owl:onProperty linkml:none_of ],
+            owl:onProperty linkml:exactly_one_of ],
         linkml:TypeExpression .
 
 linkml:Extension a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "extension" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:value ;
-            owl:qualifiedCardinality 1 ],
-        [ a owl:Restriction ;
             owl:allValuesFrom linkml:Extension ;
             owl:onProperty linkml:extensions ],
         [ a owl:Restriction ;
             owl:onClass linkml:Uriorcurie ;
             owl:onProperty linkml:tag ;
+            owl:qualifiedCardinality 1 ],
+        [ a owl:Restriction ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:value ;
             owl:qualifiedCardinality 1 ] ;
     skos:definition "a tag/value pair used to add non-model information to an entry" .
 
@@ -2043,24 +2246,33 @@ linkml:Definition a owl:Class,
     rdfs:subClassOf [ a owl:Restriction ;
             owl:allValuesFrom linkml:Definition ;
             owl:onProperty linkml:apply_to ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Definition ;
-            owl:onProperty linkml:mixins ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty bibo:status ],
+            owl:onClass linkml:Datetime ;
+            owl:onProperty pav:lastUpdatedOn ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Uriorcurie ;
             owl:onProperty linkml:values_from ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Definition ;
+            owl:onProperty linkml:is_a ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
             owl:onProperty linkml:abstract ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Definition ;
-            owl:onProperty linkml:is_a ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty bibo:status ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty oslc:modifiedBy ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Datetime ;
+            owl:onProperty pav:createdOn ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
@@ -2074,17 +2286,8 @@ linkml:Definition a owl:Class,
             owl:onClass linkml:String ;
             owl:onProperty linkml:string_serialization ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Datetime ;
-            owl:onProperty pav:lastUpdatedOn ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Datetime ;
-            owl:onProperty pav:createdOn ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty oslc:modifiedBy ],
+            owl:allValuesFrom linkml:Definition ;
+            owl:onProperty linkml:mixins ],
         linkml:Element ;
     skos:definition "base class for definitions" .
 
@@ -2092,75 +2295,75 @@ linkml:AnonymousSlotExpression a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "anonymous_slot_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:range_expression ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:minimum_cardinality ],
+        [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
             owl:onProperty linkml:maximum_value ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:equals_expression ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:recommended ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:pattern ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:all_of ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:has_member ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:none_of ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Element ;
+            owl:onProperty linkml:range ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
             owl:onProperty linkml:minimum_value ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
             owl:onProperty linkml:equals_number ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:all_of ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_expression ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_string ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
             owl:onProperty linkml:required ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:range_expression ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Element ;
-            owl:onProperty linkml:range ],
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
             owl:onProperty linkml:maximum_cardinality ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:has_member ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:recommended ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
             owl:onProperty linkml:equals_string_in ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:pattern ],
+            owl:onProperty linkml:equals_string ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:SlotDefinition ;
             owl:onProperty linkml:all_members ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:minimum_cardinality ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:exactly_one_of ],
         linkml:AnonymousExpression,
         linkml:SlotExpression .
 
@@ -2169,80 +2372,80 @@ linkml:SchemaDefinition a owl:Class,
     rdfs:label "schema_definition" ;
     rdfs:seeAlso "https://en.wikipedia.org/wiki/Data_dictionary" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty pav:version ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:default_curi_maps ],
+            owl:allValuesFrom linkml:ClassDefinition ;
+            owl:onProperty linkml:classes ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty linkml:subsets ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:TypeDefinition ;
+            owl:onProperty linkml:default_range ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
             owl:onProperty dcterms:license ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:TypeDefinition ;
-            owl:onProperty linkml:default_range ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:default_prefix ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Datetime ;
-            owl:onProperty linkml:generation_date ],
+            owl:onProperty linkml:source_file_date ],
+        [ a owl:Restriction ;
+            owl:onClass linkml:Ncname ;
+            owl:onProperty rdfs:label ;
+            owl:qualifiedCardinality 1 ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Ncname ;
+            owl:onProperty linkml:emit_prefixes ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:default_curi_maps ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:EnumDefinition ;
             owl:onProperty linkml:enums ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Prefix ;
-            owl:onProperty linkml:prefixes ],
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty linkml:subsets ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:source_file_size ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Ncname ;
-            owl:onProperty linkml:emit_prefixes ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:source_file ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
             owl:onProperty linkml:slot_names_unique ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:TypeDefinition ;
-            owl:onProperty linkml:types ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty linkml:imports ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:default_prefix ],
+            owl:onProperty linkml:metamodel_version ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SlotDefinition ;
-            owl:onProperty linkml:slots ],
+            owl:onClass linkml:Uri ;
+            owl:onProperty linkml:id ;
+            owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:source_file ],
+            owl:onProperty pav:version ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:ClassDefinition ;
-            owl:onProperty linkml:classes ],
+            owl:allValuesFrom linkml:Prefix ;
+            owl:onProperty linkml:prefixes ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:slots ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Datetime ;
-            owl:onProperty linkml:source_file_date ],
+            owl:onProperty linkml:generation_date ],
         [ a owl:Restriction ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty linkml:id ;
-            owl:qualifiedCardinality 1 ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty linkml:imports ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:metamodel_version ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:source_file_size ],
         [ a owl:Restriction ;
-            owl:onClass linkml:Ncname ;
-            owl:onProperty rdfs:label ;
-            owl:qualifiedCardinality 1 ],
+            owl:allValuesFrom linkml:TypeDefinition ;
+            owl:onProperty linkml:types ],
         linkml:Element ;
     skos:altLabel "data dictionary" ;
     skos:definition "a collection of subset, type, slot and class definitions" .
@@ -2252,20 +2455,20 @@ linkml:AnonymousClassExpression a owl:Class,
     rdfs:label "anonymous_class_expression" ;
     rdfs:subClassOf [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:onProperty linkml:all_of ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Definition ;
             owl:onProperty linkml:is_a ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:all_of ],
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:SlotDefinition ;
             owl:onProperty linkml:slot_conditions ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
             owl:onProperty linkml:none_of ],
@@ -2277,107 +2480,107 @@ linkml:Element a owl:Class,
     rdfs:label "element" ;
     rdfs:seeAlso "https://en.wikipedia.org/wiki/Data_element" ;
     rdfs:subClassOf [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AltDescription ;
-            owl:onProperty linkml:alt_descriptions ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Ncname ;
-            owl:onProperty linkml:id_prefixes ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:deprecated ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
+            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Example ;
-            owl:onProperty linkml:examples ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty skos:definition ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:altLabel ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uri ;
+            owl:onProperty skos:inScheme ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:title ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty skos:mappingRelation ],
+            owl:onProperty skos:narrowMatch ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:todos ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:definition_uri ],
+            owl:onClass linkml:String ;
+            owl:onProperty dcterms:conformsTo ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Uriorcurie ;
             owl:onProperty skos:broadMatch ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:LocalName ;
-            owl:onProperty linkml:local_names ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty skos:mappingRelation ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty skos:note ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty rdfs:seeAlso ],
+            owl:onProperty skos:relatedMatch ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:deprecated ],
+            owl:allValuesFrom linkml:Annotation ;
+            owl:onProperty linkml:annotations ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Extension ;
             owl:onProperty linkml:extensions ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty dcterms:title ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty sh1:order ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:todos ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty dcterms:source ],
+            owl:onProperty linkml:imported_from ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty skos:closeMatch ],
+            owl:onProperty rdfs:seeAlso ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:deprecated_element_has_possible_replacement ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty skos:relatedMatch ],
+            owl:onProperty linkml:definition_uri ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Uriorcurie ;
-            owl:onProperty skos:narrowMatch ],
+            owl:allValuesFrom linkml:Example ;
+            owl:onProperty linkml:examples ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty dcterms:conformsTo ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty dcterms:source ],
         [ a owl:Restriction ;
             owl:onClass linkml:String ;
             owl:onProperty rdfs:label ;
             owl:qualifiedCardinality 1 ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SubsetDefinition ;
-            owl:onProperty OIO:inSubset ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:definition ],
+            owl:allValuesFrom linkml:Uriorcurie ;
+            owl:onProperty skos:closeMatch ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uri ;
-            owl:onProperty skos:inScheme ],
+            owl:allValuesFrom linkml:AltDescription ;
+            owl:onProperty linkml:alt_descriptions ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:note ],
+            owl:allValuesFrom linkml:SubsetDefinition ;
+            owl:onProperty OIO:inSubset ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:String ;
             owl:onProperty skos:editorialNote ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:Annotation ;
-            owl:onProperty linkml:annotations ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty skos:altLabel ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:Uriorcurie ;
             owl:onProperty skos:exactMatch ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:LocalName ;
+            owl:onProperty linkml:local_names ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:imported_from ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:deprecated_element_has_exact_replacement ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:Ncname ;
+            owl:onProperty linkml:id_prefixes ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Integer ;
+            owl:onProperty sh1:order ],
         linkml:Annotatable,
         linkml:CommonMetadata,
         linkml:Extensible ;
@@ -2387,43 +2590,51 @@ linkml:ClassDefinition a owl:Class,
         linkml:ClassDefinition ;
     rdfs:label "class_definition" ;
     rdfs:subClassOf [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:exactly_one_of ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:all_of ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:slot_conditions ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:defining_slots ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:ClassRule ;
+            owl:onProperty sh1:rule ],
+        [ a owl:Restriction ;
             owl:allValuesFrom linkml:SlotDefinition ;
             owl:onProperty linkml:slots ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:slot_names_unique ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:all_of ],
+            owl:allValuesFrom linkml:ClassDefinition ;
+            owl:onProperty linkml:apply_to ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
             owl:onProperty linkml:tree_root ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:exactly_one_of ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:class_uri ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:ClassDefinition ;
-            owl:onProperty linkml:union_of ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:ClassDefinition ;
-            owl:onProperty linkml:is_a ],
+            owl:onProperty linkml:disjoint_with ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:represents_relationship ],
+            owl:onProperty linkml:children_are_mutually_disjoint ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:ClassRule ;
-            owl:onProperty sh1:rule ],
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:attributes ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:class_uri ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:represents_relationship ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:onProperty linkml:classification_rules ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:ClassDefinition ;
             owl:onProperty linkml:mixins ],
@@ -2431,30 +2642,29 @@ linkml:ClassDefinition a owl:Class,
             owl:allValuesFrom linkml:SlotDefinition ;
             owl:onProperty linkml:slot_usage ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SlotDefinition ;
-            owl:onProperty linkml:defining_slots ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:ClassDefinition ;
+            owl:onProperty linkml:is_a ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:slot_names_unique ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Uriorcurie ;
             owl:onProperty rdfs:subClassOf ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:ClassDefinition ;
-            owl:onProperty linkml:apply_to ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SlotDefinition ;
-            owl:onProperty linkml:attributes ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:none_of ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SlotDefinition ;
-            owl:onProperty linkml:slot_conditions ],
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:UniqueKey ;
             owl:onProperty linkml:unique_keys ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:ClassDefinition ;
+            owl:onProperty linkml:union_of ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:classification_rules ],
+            owl:onProperty linkml:none_of ],
         linkml:ClassExpression,
         linkml:Definition ;
     skos:altLabel "message",
@@ -2471,133 +2681,149 @@ linkml:SlotDefinition a owl:Class,
     rdfs:subClassOf [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:reflexive ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:exactly_one_of ],
+            owl:onProperty linkml:inlined_as_list ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:has_member ],
+            owl:onClass linkml:Definition ;
+            owl:onProperty linkml:owner ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:ClassDefinition ;
-            owl:onProperty linkml:domain_of ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:children_are_mutually_disjoint ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:role ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:reflexive ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass <http://UNKNOWN.org/relational_role_enum> ;
-            owl:onProperty linkml:relational_role ],
+            owl:onClass linkml:Element ;
+            owl:onProperty linkml:range ],
         [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:all_of ],
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:SlotDefinition ;
+            owl:onProperty linkml:is_a ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:ClassDefinition ;
             owl:onProperty linkml:domain ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:usage_slot_name ],
+            owl:onProperty linkml:ifabsent ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:AnonymousClassExpression ;
+            owl:onProperty linkml:range_expression ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:SlotDefinition ;
-            owl:onProperty sh1:group ],
+            owl:onProperty linkml:reflexive_transitive_form_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:is_grouping_slot ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:usage_slot_name ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:exactly_one_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:is_class_field ],
+            owl:onProperty linkml:transitive ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:maximum_cardinality ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:any_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:designates_type ],
+            owl:onProperty linkml:inherited ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Definition ;
-            owl:onProperty linkml:owner ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:is_class_field ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:symmetric ],
+            owl:onProperty linkml:locally_reflexive ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:SlotDefinition ;
-            owl:onProperty linkml:reflexive_transitive_form_of ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:irreflexive ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Integer ;
-            owl:onProperty linkml:maximum_cardinality ],
+            owl:onProperty linkml:minimum_value ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:SlotDefinition ;
-            owl:onProperty rdfs:subPropertyOf ],
+            owl:allValuesFrom linkml:ClassDefinition ;
+            owl:onProperty linkml:domain_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_string ],
+            owl:onProperty skos:prefLabel ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:SlotDefinition ;
-            owl:onProperty linkml:is_a ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:String ;
-            owl:onProperty linkml:equals_string_in ],
+            owl:onClass linkml:String ;
+            owl:onProperty skos:altLabel ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:inherited ],
+            owl:onProperty linkml:designates_type ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:recommended ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:pattern ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:ifabsent ],
+            owl:onClass linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:has_member ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:asymmetric ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:equals_string ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:equals_number ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:readonly ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:multivalued ],
+            owl:onClass linkml:SlotDefinition ;
+            owl:onProperty sh1:group ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:inlined_as_list ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:equals_expression ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:transitive ],
+            owl:onClass linkml:Uriorcurie ;
+            owl:onProperty linkml:slot_uri ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:AnonymousClassExpression ;
-            owl:onProperty linkml:range_expression ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:equals_number ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:apply_to ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:readonly ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:maximum_value ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:AnonymousSlotExpression ;
-            owl:onProperty linkml:any_of ],
+            owl:onProperty linkml:none_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:irreflexive ],
+            owl:onProperty linkml:multivalued ],
+        [ a owl:Restriction ;
+            owl:maxQualifiedCardinality 1 ;
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:recommended ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:AnonymousSlotExpression ;
+            owl:onProperty linkml:all_of ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:SlotDefinition ;
@@ -2605,80 +2831,71 @@ linkml:SlotDefinition a owl:Class,
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:is_usage_slot ],
+            owl:onProperty linkml:required ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:locally_reflexive ],
+            owl:onProperty linkml:is_usage_slot ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:pattern ],
+            owl:onClass linkml:Integer ;
+            owl:onProperty linkml:minimum_cardinality ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty linkml:equals_expression ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:key ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:prefLabel ],
+            owl:onClass linkml:SlotDefinition ;
+            owl:onProperty owl:inverseOf ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:minimum_cardinality ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SlotDefinition ;
-            owl:onProperty linkml:apply_to ],
+            owl:onClass linkml:SlotDefinition ;
+            owl:onProperty rdfs:subPropertyOf ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:maximum_value ],
+            owl:onClass linkml:RelationalRoleEnum ;
+            owl:onProperty linkml:relational_role ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:identifier ],
+            owl:onProperty linkml:asymmetric ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Integer ;
-            owl:onProperty linkml:minimum_value ],
+            owl:onClass linkml:PathExpression ;
+            owl:onProperty linkml:path_rule ],
+        [ a owl:Restriction ;
+            owl:allValuesFrom linkml:String ;
+            owl:onProperty linkml:equals_string_in ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:inlined ],
+            owl:onProperty linkml:symmetric ],
         [ a owl:Restriction ;
             owl:allValuesFrom linkml:SlotDefinition ;
             owl:onProperty linkml:all_members ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:String ;
-            owl:onProperty skos:altLabel ],
-        [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:SlotDefinition ;
-            owl:onProperty owl:inverseOf ],
-        [ a owl:Restriction ;
-            owl:allValuesFrom linkml:SlotDefinition ;
-            owl:onProperty linkml:mixins ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:is_grouping_slot ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
             owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:required ],
+            owl:onProperty linkml:identifier ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Element ;
-            owl:onProperty linkml:range ],
+            owl:onClass linkml:String ;
+            owl:onProperty linkml:role ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Uriorcurie ;
-            owl:onProperty linkml:slot_uri ],
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:mixins ],
         [ a owl:Restriction ;
-            owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:Boolean ;
-            owl:onProperty linkml:key ],
+            owl:allValuesFrom linkml:SlotDefinition ;
+            owl:onProperty linkml:disjoint_with ],
         [ a owl:Restriction ;
             owl:maxQualifiedCardinality 1 ;
-            owl:onClass linkml:PathExpression ;
-            owl:onProperty linkml:path_rule ],
+            owl:onClass linkml:Boolean ;
+            owl:onProperty linkml:inlined ],
         linkml:Definition,
         linkml:SlotExpression ;
     skos:altLabel "attribute",
diff --git a/linkml_model/rdf/annotations.model.ttl b/linkml_model/rdf/annotations.model.ttl
index 5ae021fa..929936b5 100644
--- a/linkml_model/rdf/annotations.model.ttl
+++ b/linkml_model/rdf/annotations.model.ttl
@@ -4,23 +4,16 @@
 
 [] a linkml:SchemaDefinition ;
     linkml:classes [ a linkml:ClassDefinition ;
-            linkml:class_uri "https://w3id.org/linkml/Annotatable" ;
-            linkml:definition_uri "https://w3id.org/linkml/Annotatable" ;
-            linkml:description "mixin for classes that support annotations" ;
+            linkml:class_uri "https://w3id.org/linkml/Annotation" ;
+            linkml:definition_uri "https://w3id.org/linkml/Annotation" ;
+            linkml:description "a tag/value pair with the semantics of OWL Annotation" ;
             linkml:from_schema "https://w3id.org/linkml/annotations" ;
-            linkml:mixin true ;
-            linkml:name "Annotatable" ;
-            linkml:slot_usage [ ] ;
-            linkml:slots "annotations" ],
-        [ a linkml:ClassDefinition ;
-            linkml:class_uri "https://w3id.org/linkml/Extension" ;
-            linkml:definition_uri "https://w3id.org/linkml/Extension" ;
-            linkml:description "a tag/value pair used to add non-model information to an entry" ;
-            linkml:from_schema "https://w3id.org/linkml/extensions" ;
-            linkml:imported_from "linkml:extensions" ;
-            linkml:name "Extension" ;
+            linkml:is_a "Extension" ;
+            linkml:mixins "Annotatable" ;
+            linkml:name "Annotation" ;
             linkml:slot_usage [ ] ;
-            linkml:slots "extension_tag",
+            linkml:slots "annotations",
+                "extension_tag",
                 "extension_value",
                 "extensions" ],
         [ a linkml:ClassDefinition ;
@@ -34,23 +27,30 @@
             linkml:slot_usage [ ] ;
             linkml:slots "extensions" ],
         [ a linkml:ClassDefinition ;
-            linkml:class_uri "https://w3id.org/linkml/Annotation" ;
-            linkml:definition_uri "https://w3id.org/linkml/Annotation" ;
-            linkml:description "a tag/value pair with the semantics of OWL Annotation" ;
-            linkml:from_schema "https://w3id.org/linkml/annotations" ;
-            linkml:is_a "Extension" ;
-            linkml:mixins "Annotatable" ;
-            linkml:name "Annotation" ;
+            linkml:class_uri "https://w3id.org/linkml/Extension" ;
+            linkml:definition_uri "https://w3id.org/linkml/Extension" ;
+            linkml:description "a tag/value pair used to add non-model information to an entry" ;
+            linkml:from_schema "https://w3id.org/linkml/extensions" ;
+            linkml:imported_from "linkml:extensions" ;
+            linkml:name "Extension" ;
             linkml:slot_usage [ ] ;
-            linkml:slots "annotations",
-                "extension_tag",
+            linkml:slots "extension_tag",
                 "extension_value",
-                "extensions" ] ;
+                "extensions" ],
+        [ a linkml:ClassDefinition ;
+            linkml:class_uri "https://w3id.org/linkml/Annotatable" ;
+            linkml:definition_uri "https://w3id.org/linkml/Annotatable" ;
+            linkml:description "mixin for classes that support annotations" ;
+            linkml:from_schema "https://w3id.org/linkml/annotations" ;
+            linkml:mixin true ;
+            linkml:name "Annotatable" ;
+            linkml:slot_usage [ ] ;
+            linkml:slots "annotations" ] ;
     linkml:default_prefix "linkml" ;
     linkml:default_range "string" ;
     linkml:description "Annotations mixin" ;
     linkml:emit_prefixes "linkml" ;
-    linkml:generation_date "2021-12-28T23:39:43" ;
+    linkml:generation_date "2022-01-22T01:10:11" ;
     linkml:id "https://w3id.org/linkml/annotations" ;
     linkml:imports "linkml:extensions",
         "linkml:types" ;
@@ -60,6 +60,20 @@
     linkml:prefixes [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference "https://w3id.org/linkml/" ] ;
     linkml:slots [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/extensions" ;
+            linkml:description "a tag/text tuple attached to an arbitrary element" ;
+            linkml:domain "Extensible" ;
+            linkml:domain_of "Extensible",
+                "Extension" ;
+            linkml:from_schema "https://w3id.org/linkml/extensions" ;
+            linkml:imported_from "linkml:extensions" ;
+            linkml:inlined true ;
+            linkml:multivalued true ;
+            linkml:name "extensions" ;
+            linkml:owner "Extensible" ;
+            linkml:range "Extension" ;
+            linkml:slot_uri "https://w3id.org/linkml/extensions" ],
+        [ a linkml:SlotDefinition ;
             linkml:alias "tag" ;
             linkml:definition_uri "https://w3id.org/linkml/extension_tag" ;
             linkml:description "a tag associated with an extension" ;
@@ -99,41 +113,18 @@
             linkml:owner "Extension" ;
             linkml:range "string" ;
             linkml:required true ;
-            linkml:slot_uri "https://w3id.org/linkml/value" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/extensions" ;
-            linkml:description "a tag/text tuple attached to an arbitrary element" ;
-            linkml:domain "Extensible" ;
-            linkml:domain_of "Extensible",
-                "Extension" ;
-            linkml:from_schema "https://w3id.org/linkml/extensions" ;
-            linkml:imported_from "linkml:extensions" ;
-            linkml:inlined true ;
-            linkml:multivalued true ;
-            linkml:name "extensions" ;
-            linkml:owner "Extensible" ;
-            linkml:range "Extension" ;
-            linkml:slot_uri "https://w3id.org/linkml/extensions" ] ;
+            linkml:slot_uri "https://w3id.org/linkml/value" ] ;
     linkml:source_file "annotations.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 833 ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "nodeidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
             linkml:base "NCName" ;
             linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
@@ -144,40 +135,39 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uri" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "string" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "uriorcurie" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:description "A real number that conforms to the xsd:double specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
             linkml:base "XSDDate" ;
             linkml:definition_uri "https://w3id.org/linkml/Date" ;
@@ -189,14 +179,33 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "ElementIdentifier" ;
+            linkml:comments "Used for inheritence and type checking" ;
+            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
+            linkml:description "A URI or CURIE that represents an object in the model." ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "objectidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:uri "http://www.w3.org/ns/shex#iri" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "XSDDateTime" ;
             linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
@@ -207,24 +216,23 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:name "uri" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "ElementIdentifier" ;
-            linkml:comments "Used for inheritence and type checking" ;
-            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
-            linkml:description "A URI or CURIE that represents an object in the model." ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "objectidentifier" ;
+            linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#iri" ],
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
             linkml:base "int" ;
             linkml:definition_uri "https://w3id.org/linkml/Integer" ;
@@ -232,15 +240,7 @@
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
             linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:description "A real number that conforms to the xsd:double specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ] ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ] ;
     linkml:version "2.0.0" .
 
 
diff --git a/linkml_model/rdf/annotations.ttl b/linkml_model/rdf/annotations.ttl
index 16cec61c..612d0f64 100644
--- a/linkml_model/rdf/annotations.ttl
+++ b/linkml_model/rdf/annotations.ttl
@@ -4,6 +4,17 @@
 
 [] a linkml:SchemaDefinition ;
     linkml:classes [ a linkml:ClassDefinition ;
+            linkml:class_uri "https://w3id.org/linkml/Extension" ;
+            linkml:definition_uri "https://w3id.org/linkml/Extension" ;
+            linkml:description "a tag/value pair used to add non-model information to an entry" ;
+            linkml:from_schema "https://w3id.org/linkml/extensions" ;
+            linkml:imported_from "linkml:extensions" ;
+            linkml:name "Extension" ;
+            linkml:slot_usage [ ] ;
+            linkml:slots "extension_tag",
+                "extension_value",
+                "extensions" ],
+        [ a linkml:ClassDefinition ;
             linkml:class_uri "https://w3id.org/linkml/Annotatable" ;
             linkml:definition_uri "https://w3id.org/linkml/Annotatable" ;
             linkml:description "mixin for classes that support annotations" ;
@@ -34,23 +45,12 @@
             linkml:mixin true ;
             linkml:name "Extensible" ;
             linkml:slot_usage [ ] ;
-            linkml:slots "extensions" ],
-        [ a linkml:ClassDefinition ;
-            linkml:class_uri "https://w3id.org/linkml/Extension" ;
-            linkml:definition_uri "https://w3id.org/linkml/Extension" ;
-            linkml:description "a tag/value pair used to add non-model information to an entry" ;
-            linkml:from_schema "https://w3id.org/linkml/extensions" ;
-            linkml:imported_from "linkml:extensions" ;
-            linkml:name "Extension" ;
-            linkml:slot_usage [ ] ;
-            linkml:slots "extension_tag",
-                "extension_value",
-                "extensions" ] ;
+            linkml:slots "extensions" ] ;
     linkml:default_prefix "linkml" ;
     linkml:default_range "string" ;
     linkml:description "Annotations mixin" ;
     linkml:emit_prefixes "linkml" ;
-    linkml:generation_date "2021-12-28T23:39:29" ;
+    linkml:generation_date "2022-01-22T01:09:57" ;
     linkml:id "https://w3id.org/linkml/annotations" ;
     linkml:imports "linkml:extensions",
         "linkml:types" ;
@@ -115,70 +115,67 @@
             linkml:range "Extension" ;
             linkml:slot_uri "https://w3id.org/linkml/extensions" ] ;
     linkml:source_file "annotations.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 833 ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:base "NCName" ;
+            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
+            linkml:description "Prefix part of CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+            linkml:name "ncname" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
+            linkml:description "An integer" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "nodeidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:description "An integer" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
-            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "datetime" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:description "A real number that conforms to the xsd:double specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
             linkml:base "URI" ;
             linkml:definition_uri "https://w3id.org/linkml/Uri" ;
@@ -189,22 +186,24 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
+            linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:description "A real number that conforms to the xsd:double specification" ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:description "a date (year, month and day) in an idealized calendar" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
+            linkml:name "date" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
             linkml:base "ElementIdentifier" ;
             linkml:comments "Used for inheritence and type checking" ;
@@ -216,31 +215,32 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#iri" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "string" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "uriorcurie" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NCName" ;
-            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
-            linkml:description "Prefix part of CURIE" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "ncname" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ] ;
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ] ;
     linkml:version "2.0.0" .
 
 
diff --git a/linkml_model/rdf/datasets.model.ttl b/linkml_model/rdf/datasets.model.ttl
index 1ff0e2ff..370623a9 100644
--- a/linkml_model/rdf/datasets.model.ttl
+++ b/linkml_model/rdf/datasets.model.ttl
@@ -8,41 +8,6 @@ linkml:datasets a linkml:SchemaDefinition ;
     dcterms:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     dcterms:title "LinkML Datasets Datamodel" ;
     linkml:classes [ a linkml:ClassDefinition ;
-            dcterms:description "A collection of data resources" ;
-            linkml:aliases "data resource collection",
-                "dataset",
-                "file collection" ;
-            linkml:class_uri "http://rdfs.org/ns/void#Dataset" ;
-            linkml:close_mappings "dcat:Catalog" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportDataPackage" ;
-            linkml:exact_mappings "dcat:Dataset" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:is_a "Information" ;
-            linkml:mappings "void:Dataset" ;
-            linkml:name "DataPackage" ;
-            linkml:see_also "https://specs.frictionlessdata.io/data-package" ;
-            linkml:slot_usage [ ] ;
-            linkml:slots "compression",
-                "conforms_to",
-                "conforms_to_class",
-                "conforms_to_schema",
-                "created_by",
-                "created_on",
-                "description",
-                "download_url",
-                "id",
-                "issued",
-                "keywords",
-                "language",
-                "license",
-                "page",
-                "publisher",
-                "resources",
-                "test_roles",
-                "title",
-                "version",
-                "was_derived_from" ],
-        [ a linkml:ClassDefinition ;
             dcterms:description "An individual file or table" ;
             linkml:class_uri "http://www.w3.org/ns/dcat#Distribution" ;
             linkml:definition_uri "https://w3id.org/linkml/reportDataResource" ;
@@ -107,14 +72,49 @@ linkml:datasets a linkml:SchemaDefinition ;
                 "title",
                 "version",
                 "was_derived_from" ],
+        [ a linkml:ClassDefinition ;
+            dcterms:description "A collection of data resources" ;
+            linkml:aliases "data resource collection",
+                "dataset",
+                "file collection" ;
+            linkml:class_uri "http://rdfs.org/ns/void#Dataset" ;
+            linkml:close_mappings "dcat:Catalog" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportDataPackage" ;
+            linkml:exact_mappings "dcat:Dataset" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:is_a "Information" ;
+            linkml:mappings "void:Dataset" ;
+            linkml:name "DataPackage" ;
+            linkml:see_also "https://specs.frictionlessdata.io/data-package" ;
+            linkml:slot_usage [ ] ;
+            linkml:slots "compression",
+                "conforms_to",
+                "conforms_to_class",
+                "conforms_to_schema",
+                "created_by",
+                "created_on",
+                "description",
+                "download_url",
+                "id",
+                "issued",
+                "keywords",
+                "language",
+                "license",
+                "page",
+                "publisher",
+                "resources",
+                "test_roles",
+                "title",
+                "version",
+                "was_derived_from" ],
         [ a linkml:ClassDefinition ;
             dcterms:description "Additional format information for a file" ;
             linkml:attributes [ a linkml:SlotDefinition ;
                     linkml:name "quote_char" ],
-                [ a linkml:SlotDefinition ;
-                    linkml:name "header" ],
                 [ a linkml:SlotDefinition ;
                     linkml:name "comment_prefix" ],
+                [ a linkml:SlotDefinition ;
+                    linkml:name "header" ],
                 [ a linkml:SlotDefinition ;
                     linkml:name "double_quote" ],
                 [ a linkml:SlotDefinition ;
@@ -140,59 +140,59 @@ linkml:datasets a linkml:SchemaDefinition ;
     linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportFormatEnum" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
             linkml:name "FormatEnum" ;
-            linkml:permissible_values [ linkml:meaning "formats:TriG" ;
-                    linkml:text "TriG" ],
-                [ linkml:meaning "formats:SPARQL_Results_XML" ;
-                    linkml:text "SPARQL%20Results%20in%20XML" ],
-                [ linkml:meaning "formats:N-Quads" ;
-                    linkml:text "N-Quads" ],
-                [ linkml:text "YAML" ],
-                [ linkml:meaning "formats:RDF_XML" ;
-                    linkml:text "RDF/XML" ],
+            linkml:permissible_values [ linkml:meaning "formats:POWDER-S" ;
+                    linkml:text "POWDER-S" ],
                 [ linkml:meaning "formats:OWL_XML" ;
                     linkml:text "OWL%20XML%20Serialization" ],
+                [ linkml:meaning "formats:SPARQL_Results_TSV" ;
+                    linkml:text "SPARQL%20Results%20in%20TSV" ],
+                [ linkml:meaning "formats:N-Quads" ;
+                    linkml:text "N-Quads" ],
                 [ linkml:meaning "formats:microdata" ;
                     linkml:text "Microdata" ],
+                [ linkml:text "YAML" ],
+                [ linkml:meaning "formats:SPARQL_Results_XML" ;
+                    linkml:text "SPARQL%20Results%20in%20XML" ],
+                [ linkml:meaning "formats:TriG" ;
+                    linkml:text "TriG" ],
+                [ linkml:meaning "formats:RIF_XML" ;
+                    linkml:text "RIF%20XML%20Syntax" ],
                 [ linkml:meaning "formats:SPARQL_Results_CSV" ;
                     linkml:text "SPARQL%20Results%20in%20CSV" ],
-                [ linkml:meaning "formats:OWL_Functional" ;
-                    linkml:text "OWL%20Functional%20Syntax" ],
-                [ linkml:meaning "formats:SPARQL_Results_TSV" ;
-                    linkml:text "SPARQL%20Results%20in%20TSV" ],
-                [ linkml:meaning "formats:N3" ;
-                    linkml:text "N3" ],
+                [ linkml:meaning "formats:JSON-LD" ;
+                    linkml:text "JSON-LD" ],
+                [ linkml:text "JSON" ],
                 [ linkml:meaning "formats:Turtle" ;
                     linkml:text "Turtle" ],
+                [ linkml:meaning "formats:LD_Patch" ;
+                    linkml:text "LD%20Patch" ],
+                [ linkml:meaning "formats:POWDER" ;
+                    linkml:text "POWDER" ],
                 [ linkml:meaning "formats:PROV-XML" ;
                     linkml:text "PROV-XML" ],
+                [ linkml:meaning "formats:RDFa" ;
+                    linkml:text "RDFa" ],
+                [ linkml:meaning "formats:N3" ;
+                    linkml:text "N3" ],
+                [ linkml:meaning "formats:SPARQL_Results_JSON" ;
+                    linkml:text "SPARQL%20Results%20in%20JSON" ],
                 [ linkml:meaning "formats:OWL_Manchester" ;
                     linkml:text "OWL%20Manchester%20Syntax" ],
+                [ linkml:meaning "formats:RDF_XML" ;
+                    linkml:text "RDF/XML" ],
                 [ linkml:meaning "formats:PROV-N" ;
                     linkml:text "PROV-N" ],
-                [ linkml:meaning "formats:LD_Patch" ;
-                    linkml:text "LD%20Patch" ],
-                [ linkml:meaning "formats:N-Triples" ;
-                    linkml:text "N-Triples" ],
-                [ linkml:meaning "formats:RDFa" ;
-                    linkml:text "RDFa" ],
+                [ linkml:meaning "formats:OWL_Functional" ;
+                    linkml:text "OWL%20Functional%20Syntax" ],
                 [ linkml:meaning "formats:RDF_JSON" ;
                     linkml:text "RDF/JSON" ],
-                [ linkml:meaning "formats:JSON-LD" ;
-                    linkml:text "JSON-LD" ],
-                [ linkml:meaning "formats:POWDER" ;
-                    linkml:text "POWDER" ],
-                [ linkml:text "JSON" ],
-                [ linkml:meaning "formats:POWDER-S" ;
-                    linkml:text "POWDER-S" ],
-                [ linkml:meaning "formats:SPARQL_Results_JSON" ;
-                    linkml:text "SPARQL%20Results%20in%20JSON" ],
-                [ linkml:meaning "formats:RIF_XML" ;
-                    linkml:text "RIF%20XML%20Syntax" ] ],
+                [ linkml:meaning "formats:N-Triples" ;
+                    linkml:text "N-Triples" ] ],
         [ linkml:definition_uri "https://w3id.org/linkml/reportTestRole" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
             linkml:name "TestRole" ;
-            linkml:permissible_values [ linkml:text "CounterExample" ],
-                [ linkml:text "Example" ] ],
+            linkml:permissible_values [ linkml:text "Example" ],
+                [ linkml:text "CounterExample" ] ],
         [ linkml:definition_uri "https://w3id.org/linkml/reportMediaTypeEnum" ;
             linkml:exact_mappings "dcterms:MediaType" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
@@ -201,45 +201,46 @@ linkml:datasets a linkml:SchemaDefinition ;
                     linkml:text "csv" ],
                 [ linkml:meaning "mediatypes:application/rdf+xml" ;
                     linkml:text "rdf-xml" ] ] ;
-    linkml:generation_date "2021-12-28T23:39:41" ;
+    linkml:generation_date "2022-01-22T01:10:19" ;
     linkml:imports "linkml:types" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:name "datasets" ;
-    linkml:prefixes [ linkml:prefix_prefix "formats" ;
-            linkml:prefix_reference "http://www.w3.org/ns/formats/" ],
+    linkml:prefixes [ linkml:prefix_prefix "sh" ;
+            linkml:prefix_reference "https://w3id.org/shacl/" ],
         [ linkml:prefix_prefix "void" ;
             linkml:prefix_reference "http://rdfs.org/ns/void#" ],
-        [ linkml:prefix_prefix "datasets" ;
-            linkml:prefix_reference "https://w3id.org/linkml/report" ],
-        [ linkml:prefix_prefix "skos" ;
-            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
+        [ linkml:prefix_prefix "schema" ;
+            linkml:prefix_reference "http://schema.org/" ],
         [ linkml:prefix_prefix "frictionless" ;
             linkml:prefix_reference "https://specs.frictionlessdata.io/" ],
+        [ linkml:prefix_prefix "pav" ;
+            linkml:prefix_reference "http://purl.org/pav/" ],
+        [ linkml:prefix_prefix "formats" ;
+            linkml:prefix_reference "http://www.w3.org/ns/formats/" ],
+        [ linkml:prefix_prefix "dcat" ;
+            linkml:prefix_reference "http://www.w3.org/ns/dcat#" ],
         [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference "https://w3id.org/linkml/" ],
-        [ linkml:prefix_prefix "sh" ;
-            linkml:prefix_reference "https://w3id.org/shacl/" ],
+        [ linkml:prefix_prefix "skos" ;
+            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
+        [ linkml:prefix_prefix "datasets" ;
+            linkml:prefix_reference "https://w3id.org/linkml/report" ],
         [ linkml:prefix_prefix "csvw" ;
             linkml:prefix_reference "http://www.w3.org/ns/csvw#" ],
-        [ linkml:prefix_prefix "schema" ;
-            linkml:prefix_reference "http://schema.org/" ],
         [ linkml:prefix_prefix "mediatypes" ;
-            linkml:prefix_reference "https://www.iana.org/assignments/media-types/" ],
-        [ linkml:prefix_prefix "pav" ;
-            linkml:prefix_reference "http://purl.org/pav/" ],
-        [ linkml:prefix_prefix "dcat" ;
-            linkml:prefix_reference "http://www.w3.org/ns/dcat#" ] ;
+            linkml:prefix_reference "https://www.iana.org/assignments/media-types/" ] ;
     linkml:see_also "https://specs.frictionlessdata.io/data-resource",
         "https://www.w3.org/TR/hcls-dataset/",
         "https://www.w3.org/TR/void/" ;
     linkml:slots [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportcompression" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "compression" ;
+            linkml:mappings "http://purl.org/dc/terms/conformsTo" ;
+            linkml:name "conforms_to" ;
             linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportcompression" ],
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "http://purl.org/dc/terms/conformsTo" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "agent that created the element" ;
             linkml:definition_uri "https://w3id.org/linkml/reportcreated_by" ;
@@ -251,57 +252,62 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "http://purl.org/pav/createdBy" ],
         [ a linkml:SlotDefinition ;
-            linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportdownload_url" ;
-            linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://schema.org/url" ;
+            linkml:alias "delimiter" ;
+            linkml:domain_of "FormatDialect" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#downloadURL" ;
-            linkml:name "download_url" ;
-            linkml:owner "Information" ;
-            linkml:range "uri" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#downloadURL" ],
+            linkml:name "formatDialect__delimiter" ;
+            linkml:owner "FormatDialect" ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportdelimiter" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportprofile" ;
-            linkml:exact_mappings "https://specs.frictionlessdata.io/profiles" ;
+            dcterms:description "the unique name of th dataset" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportid" ;
+            linkml:domain_of "Information" ;
+            linkml:exact_mappings "http://schema.org/name" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "profile" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportprofile" ],
+            linkml:identifier true ;
+            linkml:mappings "http://purl.org/dc/terms/identifier" ;
+            linkml:name "id" ;
+            linkml:owner "Information" ;
+            linkml:range "string" ;
+            linkml:required true ;
+            linkml:slot_uri "http://purl.org/dc/terms/identifier" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportdialect" ;
+            linkml:definition_uri "https://w3id.org/linkml/reporthash" ;
             linkml:domain_of "DataResource" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/csvw#dialect" ;
-            linkml:name "dialect" ;
+            linkml:name "hash" ;
             linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/csvw#dialect" ],
+            linkml:slot_uri "https://w3id.org/linkml/reporthash" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "A derivation is a transformation of an entity into another, an update of an entity resulting in a new one, or the construction of a new entity based on a pre-existing entity.@en" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportwas_derived_from" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportcompression" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/prov#wasDerivedFrom" ;
-            linkml:name "was_derived_from" ;
+            linkml:name "compression" ;
             linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/prov#wasDerivedFrom" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportcompression" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportmedia_type" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportformat" ;
             linkml:domain_of "DataResource" ;
-            linkml:exact_mappings "http://schema.org/encodingFormat",
-                "https://specs.frictionlessdata.io/mediatype" ;
-            linkml:examples [ a linkml:Example ;
-                    linkml:value "text/csv" ],
-                [ a linkml:Example ;
-                    linkml:value "application/json" ] ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#mediaType" ;
-            linkml:name "media_type" ;
+            linkml:mappings "http://purl.org/dc/terms/format" ;
+            linkml:name "format" ;
+            linkml:owner "DataResource" ;
+            linkml:range "FormatEnum" ;
+            linkml:slot_uri "http://purl.org/dc/terms/format" ],
+        [ a linkml:SlotDefinition ;
+            dcterms:description "the official title of the element" ;
+            linkml:definition_uri "https://w3id.org/linkml/reporttitle" ;
+            linkml:domain_of "DataResource",
+                "Information" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://purl.org/dc/terms/title" ;
+            linkml:name "title" ;
             linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#mediaType" ],
+            linkml:slot_uri "http://purl.org/dc/terms/title" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_schema" ;
             linkml:domain_of "Information" ;
@@ -313,46 +319,22 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_schema" ],
         [ a linkml:SlotDefinition ;
-            linkml:alias "header" ;
-            linkml:domain_of "FormatDialect" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportencoding" ;
+            linkml:domain_of "DataResource" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__header" ;
-            linkml:owner "FormatDialect" ;
+            linkml:name "encoding" ;
+            linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportheader" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportencoding" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "the unique name of th dataset" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportid" ;
-            linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://schema.org/name" ;
+            linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportpath" ;
+            linkml:domain_of "DataResource" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:identifier true ;
-            linkml:mappings "http://purl.org/dc/terms/identifier" ;
-            linkml:name "id" ;
-            linkml:owner "Information" ;
+            linkml:name "path" ;
+            linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:required true ;
-            linkml:slot_uri "http://purl.org/dc/terms/identifier" ],
-        [ a linkml:SlotDefinition ;
-            linkml:alias "double_quote" ;
-            linkml:domain_of "FormatDialect" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__double_quote" ;
-            linkml:owner "FormatDialect" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportdouble_quote" ],
-        [ a linkml:SlotDefinition ;
-            dcterms:description "particular version of schema" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportversion" ;
-            linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://purl.org/dc/terms/hasVersion",
-                "http://schema.org/version" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/pav/version" ;
-            linkml:name "version" ;
-            linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "http://purl.org/pav/version" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportpath" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportkeywords" ;
             linkml:domain_of "Information" ;
@@ -366,32 +348,37 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:singular_name "keyword" ;
             linkml:slot_uri "http://www.w3.org/ns/dcat#keyword" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to" ;
-            linkml:domain_of "Information" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportprofile" ;
+            linkml:exact_mappings "https://specs.frictionlessdata.io/profiles" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/conformsTo" ;
-            linkml:name "conforms_to" ;
-            linkml:owner "Information" ;
+            linkml:name "profile" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://purl.org/dc/terms/conformsTo" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportprofile" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "status of the element" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportstatus" ;
-            linkml:examples [ a linkml:Example ;
-                    linkml:value "bibo:draft" ] ;
+            linkml:alias "comment_prefix" ;
+            linkml:domain_of "FormatDialect" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://example.org/UNKNOWN/bibo/status" ;
-            linkml:name "status" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://example.org/UNKNOWN/bibo/status" ],
+            linkml:name "formatDialect__comment_prefix" ;
+            linkml:owner "FormatDialect" ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportcomment_prefix" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "time at which the element was last updated" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportlast_updated_on" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportissued" ;
+            linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/pav/lastUpdatedOn" ;
-            linkml:name "last_updated_on" ;
+            linkml:mappings "http://purl.org/dc/terms/issued" ;
+            linkml:name "issued" ;
+            linkml:owner "Information" ;
             linkml:range "datetime" ;
-            linkml:slot_uri "http://purl.org/pav/lastUpdatedOn" ],
+            linkml:slot_uri "http://purl.org/dc/terms/issued" ],
+        [ a linkml:SlotDefinition ;
+            linkml:alias "double_quote" ;
+            linkml:domain_of "FormatDialect" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:name "formatDialect__double_quote" ;
+            linkml:owner "FormatDialect" ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportdouble_quote" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "time at which the element was created" ;
             linkml:definition_uri "https://w3id.org/linkml/reportcreated_on" ;
@@ -403,52 +390,31 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "datetime" ;
             linkml:slot_uri "http://purl.org/pav/createdOn" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reporttest_roles" ;
-            linkml:domain_of "Information" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:multivalued true ;
-            linkml:name "test_roles" ;
-            linkml:owner "Information" ;
-            linkml:range "TestRole" ;
-            linkml:slot_uri "https://w3id.org/linkml/reporttest_roles" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportresources" ;
-            linkml:domain_of "DataPackage" ;
-            linkml:exact_mappings "http://schema.org/distribution" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#distribution" ;
-            linkml:multivalued true ;
-            linkml:name "resources" ;
-            linkml:owner "DataPackage" ;
-            linkml:range "DataResource" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#distribution" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportpage" ;
-            linkml:domain_of "Information" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#landingPage" ;
-            linkml:name "page" ;
-            linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#landingPage" ],
-        [ a linkml:SlotDefinition ;
-            dcterms:description "language in which the information is expressed" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportlanguage" ;
+            linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportdownload_url" ;
             linkml:domain_of "Information" ;
+            linkml:exact_mappings "http://schema.org/url" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "language" ;
+            linkml:mappings "http://www.w3.org/ns/dcat#downloadURL" ;
+            linkml:name "download_url" ;
             linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportlanguage" ],
+            linkml:range "uri" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#downloadURL" ],
         [ a linkml:SlotDefinition ;
-            linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportpath" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportmedia_type" ;
             linkml:domain_of "DataResource" ;
+            linkml:exact_mappings "http://schema.org/encodingFormat",
+                "https://specs.frictionlessdata.io/mediatype" ;
+            linkml:examples [ a linkml:Example ;
+                    linkml:value "application/json" ],
+                [ a linkml:Example ;
+                    linkml:value "text/csv" ] ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "path" ;
+            linkml:mappings "http://www.w3.org/ns/dcat#mediaType" ;
+            linkml:name "media_type" ;
             linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportpath" ],
+            linkml:slot_uri "http://www.w3.org/ns/dcat#mediaType" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "human readable description of the information" ;
             linkml:definition_uri "https://w3id.org/linkml/reportdescription" ;
@@ -461,41 +427,27 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "http://purl.org/dc/terms/description" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportissued" ;
-            linkml:domain_of "Information" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/issued" ;
-            linkml:name "issued" ;
-            linkml:owner "Information" ;
-            linkml:range "datetime" ;
-            linkml:slot_uri "http://purl.org/dc/terms/issued" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportpublisher" ;
+            dcterms:description "A derivation is a transformation of an entity into another, an update of an entity resulting in a new one, or the construction of a new entity based on a pre-existing entity.@en" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportwas_derived_from" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/publisher" ;
-            linkml:name "publisher" ;
+            linkml:mappings "http://www.w3.org/ns/prov#wasDerivedFrom" ;
+            linkml:name "was_derived_from" ;
             linkml:owner "Information" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://purl.org/dc/terms/publisher" ],
+            linkml:range "string" ;
+            linkml:slot_uri "http://www.w3.org/ns/prov#wasDerivedFrom" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "class in schema which the data object instantiates" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_class" ;
+            dcterms:description "particular version of schema" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportversion" ;
             linkml:domain_of "Information" ;
+            linkml:exact_mappings "http://purl.org/dc/terms/hasVersion",
+                "http://schema.org/version" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:is_a "conforms_to" ;
-            linkml:name "conforms_to_class" ;
+            linkml:mappings "http://purl.org/pav/version" ;
+            linkml:name "version" ;
             linkml:owner "Information" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_class" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reporthash" ;
-            linkml:domain_of "DataResource" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "hash" ;
-            linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reporthash" ],
+            linkml:slot_uri "http://purl.org/pav/version" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "agent that modified the element" ;
             linkml:definition_uri "https://w3id.org/linkml/reportmodified_by" ;
@@ -504,6 +456,16 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "modified_by" ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "http://example.org/UNKNOWN/oslc/modifiedBy" ],
+        [ a linkml:SlotDefinition ;
+            dcterms:description "status of the element" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportstatus" ;
+            linkml:examples [ a linkml:Example ;
+                    linkml:value "bibo:draft" ] ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://example.org/UNKNOWN/bibo/status" ;
+            linkml:name "status" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "http://example.org/UNKNOWN/bibo/status" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportbytes" ;
             linkml:domain_of "DataResource" ;
@@ -513,6 +475,23 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:owner "DataResource" ;
             linkml:range "integer" ;
             linkml:slot_uri "http://www.w3.org/ns/dcat#byteSize" ],
+        [ a linkml:SlotDefinition ;
+            dcterms:description "time at which the element was last updated" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportlast_updated_on" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://purl.org/pav/lastUpdatedOn" ;
+            linkml:name "last_updated_on" ;
+            linkml:range "datetime" ;
+            linkml:slot_uri "http://purl.org/pav/lastUpdatedOn" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reportpublisher" ;
+            linkml:domain_of "Information" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://purl.org/dc/terms/publisher" ;
+            linkml:name "publisher" ;
+            linkml:owner "Information" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "http://purl.org/dc/terms/publisher" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "license for the data" ;
             linkml:definition_uri "https://w3id.org/linkml/reportlicense" ;
@@ -525,32 +504,33 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "http://purl.org/dc/terms/license" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportencoding" ;
-            linkml:domain_of "DataResource" ;
+            dcterms:description "language in which the information is expressed" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportlanguage" ;
+            linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "encoding" ;
-            linkml:owner "DataResource" ;
+            linkml:name "language" ;
+            linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportencoding" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportlanguage" ],
         [ a linkml:SlotDefinition ;
-            linkml:alias "delimiter" ;
+            linkml:alias "header" ;
             linkml:domain_of "FormatDialect" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__delimiter" ;
+            linkml:name "formatDialect__header" ;
             linkml:owner "FormatDialect" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportdelimiter" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportheader" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "the official title of the element" ;
-            linkml:definition_uri "https://w3id.org/linkml/reporttitle" ;
-            linkml:domain_of "DataResource",
-                "Information" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportresources" ;
+            linkml:domain_of "DataPackage" ;
+            linkml:exact_mappings "http://schema.org/distribution" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/title" ;
-            linkml:name "title" ;
-            linkml:owner "DataResource" ;
-            linkml:range "string" ;
-            linkml:slot_uri "http://purl.org/dc/terms/title" ],
+            linkml:mappings "http://www.w3.org/ns/dcat#distribution" ;
+            linkml:multivalued true ;
+            linkml:name "resources" ;
+            linkml:owner "DataPackage" ;
+            linkml:range "DataResource" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#distribution" ],
         [ a linkml:SlotDefinition ;
             linkml:alias "quote_char" ;
             linkml:domain_of "FormatDialect" ;
@@ -560,22 +540,23 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportquote_char" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportformat" ;
-            linkml:domain_of "DataResource" ;
+            linkml:definition_uri "https://w3id.org/linkml/reporttest_roles" ;
+            linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/format" ;
-            linkml:name "format" ;
-            linkml:owner "DataResource" ;
-            linkml:range "FormatEnum" ;
-            linkml:slot_uri "http://purl.org/dc/terms/format" ],
+            linkml:multivalued true ;
+            linkml:name "test_roles" ;
+            linkml:owner "Information" ;
+            linkml:range "TestRole" ;
+            linkml:slot_uri "https://w3id.org/linkml/reporttest_roles" ],
         [ a linkml:SlotDefinition ;
-            linkml:alias "comment_prefix" ;
-            linkml:domain_of "FormatDialect" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportdialect" ;
+            linkml:domain_of "DataResource" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__comment_prefix" ;
-            linkml:owner "FormatDialect" ;
+            linkml:mappings "http://www.w3.org/ns/csvw#dialect" ;
+            linkml:name "dialect" ;
+            linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportcomment_prefix" ],
+            linkml:slot_uri "http://www.w3.org/ns/csvw#dialect" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportthemes" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
@@ -584,28 +565,30 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "themes" ;
             linkml:range "uriorcurie" ;
             linkml:singular_name "theme" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#theme" ] ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#theme" ],
+        [ a linkml:SlotDefinition ;
+            dcterms:description "class in schema which the data object instantiates" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_class" ;
+            linkml:domain_of "Information" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:is_a "conforms_to" ;
+            linkml:name "conforms_to_class" ;
+            linkml:owner "Information" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_class" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reportpage" ;
+            linkml:domain_of "Information" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://www.w3.org/ns/dcat#landingPage" ;
+            linkml:name "page" ;
+            linkml:owner "Information" ;
+            linkml:range "string" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#landingPage" ] ;
     linkml:source_file "datasets.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 7649 ;
     linkml:types [ a linkml:TypeDefinition ;
-            dcterms:description "A binary (true or false) value" ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "An integer" ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
-        [ a linkml:TypeDefinition ;
             dcterms:description "A character string" ;
             linkml:base "str" ;
             linkml:definition_uri "https://w3id.org/linkml/String" ;
@@ -613,15 +596,6 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:imported_from "linkml:types" ;
             linkml:name "string" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A URI, CURIE or BNODE that represents a node in a model." ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "nodeidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "The combination of a date and time" ;
             linkml:base "XSDDateTime" ;
@@ -632,14 +606,15 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "a URI or a CURIE" ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            dcterms:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "a complete URI" ;
             linkml:base "URI" ;
@@ -650,23 +625,14 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A time object represents a (local) time of day, independent of any particular day" ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            dcterms:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "A real number that conforms to the xsd:double specification" ;
             linkml:base "float" ;
@@ -676,15 +642,22 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "double" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "a date (year, month and day) in an idealized calendar" ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            dcterms:description "An integer" ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "A binary (true or false) value" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "Prefix part of CURIE" ;
             linkml:base "NCName" ;
@@ -694,6 +667,23 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "ncname" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "a URI or a CURIE" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "uriorcurie" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "A real number that conforms to the xsd:float specification" ;
             linkml:base "float" ;
@@ -702,6 +692,16 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:imported_from "linkml:types" ;
             linkml:name "float" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "date" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "A URI or CURIE that represents an object in the model." ;
             linkml:base "ElementIdentifier" ;
diff --git a/linkml_model/rdf/datasets.ttl b/linkml_model/rdf/datasets.ttl
index 2ce8822b..a6a4eebc 100644
--- a/linkml_model/rdf/datasets.ttl
+++ b/linkml_model/rdf/datasets.ttl
@@ -8,84 +8,85 @@ linkml:datasets a linkml:SchemaDefinition ;
     dcterms:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     dcterms:title "LinkML Datasets Datamodel" ;
     linkml:classes [ a linkml:ClassDefinition ;
-            dcterms:description "An individual file or table" ;
-            linkml:class_uri "http://www.w3.org/ns/dcat#Distribution" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportDataResource" ;
-            linkml:exact_mappings "schema:DataDownload" ;
+            dcterms:description "A collection of data resources" ;
+            linkml:aliases "data resource collection",
+                "dataset",
+                "file collection" ;
+            linkml:class_uri "http://rdfs.org/ns/void#Dataset" ;
+            linkml:close_mappings "dcat:Catalog" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportDataPackage" ;
+            linkml:exact_mappings "dcat:Dataset" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
             linkml:is_a "Information" ;
-            linkml:mappings "dcat:Distribution" ;
-            linkml:name "DataResource" ;
-            linkml:see_also "https://specs.frictionlessdata.io/data-resource" ;
+            linkml:mappings "void:Dataset" ;
+            linkml:name "DataPackage" ;
+            linkml:see_also "https://specs.frictionlessdata.io/data-package" ;
             linkml:slot_usage [ ] ;
-            linkml:slots "bytes",
-                "compression",
+            linkml:slots "compression",
                 "conforms_to",
                 "conforms_to_class",
                 "conforms_to_schema",
                 "created_by",
                 "created_on",
                 "description",
-                "dialect",
                 "download_url",
-                "encoding",
-                "format",
-                "hash",
                 "id",
                 "issued",
                 "keywords",
                 "language",
                 "license",
-                "media_type",
                 "page",
-                "path",
                 "publisher",
+                "resources",
                 "test_roles",
                 "title",
                 "version",
                 "was_derived_from" ],
         [ a linkml:ClassDefinition ;
-            dcterms:description "Grouping for datasets and data files" ;
-            linkml:abstract true ;
-            linkml:class_uri "https://w3id.org/linkml/reportInformation" ;
-            linkml:close_mappings "schema:CreativeWork" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportInformation" ;
+            dcterms:description "An individual file or table" ;
+            linkml:class_uri "http://www.w3.org/ns/dcat#Distribution" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportDataResource" ;
+            linkml:exact_mappings "schema:DataDownload" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "Information" ;
+            linkml:is_a "Information" ;
+            linkml:mappings "dcat:Distribution" ;
+            linkml:name "DataResource" ;
+            linkml:see_also "https://specs.frictionlessdata.io/data-resource" ;
             linkml:slot_usage [ ] ;
-            linkml:slots "compression",
+            linkml:slots "bytes",
+                "compression",
                 "conforms_to",
                 "conforms_to_class",
                 "conforms_to_schema",
                 "created_by",
                 "created_on",
                 "description",
+                "dialect",
                 "download_url",
+                "encoding",
+                "format",
+                "hash",
                 "id",
                 "issued",
                 "keywords",
                 "language",
                 "license",
+                "media_type",
                 "page",
+                "path",
                 "publisher",
                 "test_roles",
                 "title",
                 "version",
                 "was_derived_from" ],
         [ a linkml:ClassDefinition ;
-            dcterms:description "A collection of data resources" ;
-            linkml:aliases "data resource collection",
-                "dataset",
-                "file collection" ;
-            linkml:class_uri "http://rdfs.org/ns/void#Dataset" ;
-            linkml:close_mappings "dcat:Catalog" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportDataPackage" ;
-            linkml:exact_mappings "dcat:Dataset" ;
+            dcterms:description "Grouping for datasets and data files" ;
+            linkml:abstract true ;
+            linkml:class_uri "https://w3id.org/linkml/reportInformation" ;
+            linkml:close_mappings "schema:CreativeWork" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportInformation" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:is_a "Information" ;
-            linkml:mappings "void:Dataset" ;
-            linkml:name "DataPackage" ;
-            linkml:see_also "https://specs.frictionlessdata.io/data-package" ;
+            linkml:name "Information" ;
             linkml:slot_usage [ ] ;
             linkml:slots "compression",
                 "conforms_to",
@@ -102,7 +103,6 @@ linkml:datasets a linkml:SchemaDefinition ;
                 "license",
                 "page",
                 "publisher",
-                "resources",
                 "test_roles",
                 "title",
                 "version",
@@ -110,15 +110,15 @@ linkml:datasets a linkml:SchemaDefinition ;
         [ a linkml:ClassDefinition ;
             dcterms:description "Additional format information for a file" ;
             linkml:attributes [ a linkml:SlotDefinition ;
+                    linkml:name "header" ],
+                [ a linkml:SlotDefinition ;
                     linkml:name "delimiter" ],
                 [ a linkml:SlotDefinition ;
-                    linkml:name "header" ],
+                    linkml:name "double_quote" ],
                 [ a linkml:SlotDefinition ;
                     linkml:name "comment_prefix" ],
                 [ a linkml:SlotDefinition ;
-                    linkml:name "quote_char" ],
-                [ a linkml:SlotDefinition ;
-                    linkml:name "double_quote" ] ;
+                    linkml:name "quote_char" ] ;
             linkml:class_uri "https://w3id.org/linkml/reportFormatDialect" ;
             linkml:definition_uri "https://w3id.org/linkml/reportFormatDialect" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
@@ -137,109 +137,110 @@ linkml:datasets a linkml:SchemaDefinition ;
         "rdf",
         "rdfs",
         "xsd" ;
-    linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportFormatEnum" ;
+    linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportMediaTypeEnum" ;
+            linkml:exact_mappings "dcterms:MediaType" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:name "MediaTypeEnum" ;
+            linkml:permissible_values [ linkml:meaning "mediatypes:text/csv" ;
+                    linkml:text "csv" ],
+                [ linkml:meaning "mediatypes:application/rdf+xml" ;
+                    linkml:text "rdf-xml" ] ],
+        [ linkml:definition_uri "https://w3id.org/linkml/reportFormatEnum" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
             linkml:name "FormatEnum" ;
-            linkml:permissible_values [ linkml:text "YAML" ],
-                [ linkml:meaning "formats:N-Triples" ;
-                    linkml:text "N-Triples" ],
-                [ linkml:meaning "formats:PROV-XML" ;
-                    linkml:text "PROV-XML" ],
+            linkml:permissible_values [ linkml:meaning "formats:OWL_Functional" ;
+                    linkml:text "OWL%20Functional%20Syntax" ],
+                [ linkml:meaning "formats:Turtle" ;
+                    linkml:text "Turtle" ],
+                [ linkml:text "JSON" ],
+                [ linkml:text "YAML" ],
                 [ linkml:meaning "formats:SPARQL_Results_JSON" ;
                     linkml:text "SPARQL%20Results%20in%20JSON" ],
-                [ linkml:meaning "formats:JSON-LD" ;
-                    linkml:text "JSON-LD" ],
+                [ linkml:meaning "formats:TriG" ;
+                    linkml:text "TriG" ],
                 [ linkml:meaning "formats:LD_Patch" ;
                     linkml:text "LD%20Patch" ],
+                [ linkml:meaning "formats:OWL_Manchester" ;
+                    linkml:text "OWL%20Manchester%20Syntax" ],
                 [ linkml:meaning "formats:N-Quads" ;
                     linkml:text "N-Quads" ],
-                [ linkml:text "JSON" ],
-                [ linkml:meaning "formats:PROV-N" ;
-                    linkml:text "PROV-N" ],
+                [ linkml:meaning "formats:SPARQL_Results_TSV" ;
+                    linkml:text "SPARQL%20Results%20in%20TSV" ],
                 [ linkml:meaning "formats:RDFa" ;
                     linkml:text "RDFa" ],
                 [ linkml:meaning "formats:microdata" ;
                     linkml:text "Microdata" ],
-                [ linkml:meaning "formats:OWL_XML" ;
-                    linkml:text "OWL%20XML%20Serialization" ],
-                [ linkml:meaning "formats:SPARQL_Results_CSV" ;
-                    linkml:text "SPARQL%20Results%20in%20CSV" ],
-                [ linkml:meaning "formats:OWL_Functional" ;
-                    linkml:text "OWL%20Functional%20Syntax" ],
-                [ linkml:meaning "formats:TriG" ;
-                    linkml:text "TriG" ],
-                [ linkml:meaning "formats:SPARQL_Results_XML" ;
-                    linkml:text "SPARQL%20Results%20in%20XML" ],
+                [ linkml:meaning "formats:PROV-N" ;
+                    linkml:text "PROV-N" ],
                 [ linkml:meaning "formats:N3" ;
                     linkml:text "N3" ],
+                [ linkml:meaning "formats:SPARQL_Results_CSV" ;
+                    linkml:text "SPARQL%20Results%20in%20CSV" ],
+                [ linkml:meaning "formats:POWDER-S" ;
+                    linkml:text "POWDER-S" ],
+                [ linkml:meaning "formats:PROV-XML" ;
+                    linkml:text "PROV-XML" ],
+                [ linkml:meaning "formats:RDF_XML" ;
+                    linkml:text "RDF/XML" ],
+                [ linkml:meaning "formats:N-Triples" ;
+                    linkml:text "N-Triples" ],
                 [ linkml:meaning "formats:POWDER" ;
                     linkml:text "POWDER" ],
-                [ linkml:meaning "formats:Turtle" ;
-                    linkml:text "Turtle" ],
+                [ linkml:meaning "formats:OWL_XML" ;
+                    linkml:text "OWL%20XML%20Serialization" ],
+                [ linkml:meaning "formats:SPARQL_Results_XML" ;
+                    linkml:text "SPARQL%20Results%20in%20XML" ],
+                [ linkml:meaning "formats:JSON-LD" ;
+                    linkml:text "JSON-LD" ],
                 [ linkml:meaning "formats:RIF_XML" ;
                     linkml:text "RIF%20XML%20Syntax" ],
-                [ linkml:meaning "formats:SPARQL_Results_TSV" ;
-                    linkml:text "SPARQL%20Results%20in%20TSV" ],
-                [ linkml:meaning "formats:OWL_Manchester" ;
-                    linkml:text "OWL%20Manchester%20Syntax" ],
                 [ linkml:meaning "formats:RDF_JSON" ;
-                    linkml:text "RDF/JSON" ],
-                [ linkml:meaning "formats:POWDER-S" ;
-                    linkml:text "POWDER-S" ],
-                [ linkml:meaning "formats:RDF_XML" ;
-                    linkml:text "RDF/XML" ] ],
+                    linkml:text "RDF/JSON" ] ],
         [ linkml:definition_uri "https://w3id.org/linkml/reportTestRole" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
             linkml:name "TestRole" ;
             linkml:permissible_values [ linkml:text "CounterExample" ],
-                [ linkml:text "Example" ] ],
-        [ linkml:definition_uri "https://w3id.org/linkml/reportMediaTypeEnum" ;
-            linkml:exact_mappings "dcterms:MediaType" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "MediaTypeEnum" ;
-            linkml:permissible_values [ linkml:meaning "mediatypes:application/rdf+xml" ;
-                    linkml:text "rdf-xml" ],
-                [ linkml:meaning "mediatypes:text/csv" ;
-                    linkml:text "csv" ] ] ;
-    linkml:generation_date "2021-12-28T23:39:27" ;
+                [ linkml:text "Example" ] ] ;
+    linkml:generation_date "2022-01-22T01:10:05" ;
     linkml:imports "linkml:types" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:name "datasets" ;
-    linkml:prefixes [ linkml:prefix_prefix "dcat" ;
-            linkml:prefix_reference "http://www.w3.org/ns/dcat#" ],
+    linkml:prefixes [ linkml:prefix_prefix "datasets" ;
+            linkml:prefix_reference "https://w3id.org/linkml/report" ],
         [ linkml:prefix_prefix "skos" ;
             linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
-        [ linkml:prefix_prefix "csvw" ;
-            linkml:prefix_reference "http://www.w3.org/ns/csvw#" ],
         [ linkml:prefix_prefix "schema" ;
             linkml:prefix_reference "http://schema.org/" ],
-        [ linkml:prefix_prefix "sh" ;
-            linkml:prefix_reference "https://w3id.org/shacl/" ],
-        [ linkml:prefix_prefix "formats" ;
-            linkml:prefix_reference "http://www.w3.org/ns/formats/" ],
-        [ linkml:prefix_prefix "pav" ;
-            linkml:prefix_reference "http://purl.org/pav/" ],
-        [ linkml:prefix_prefix "frictionless" ;
-            linkml:prefix_reference "https://specs.frictionlessdata.io/" ],
         [ linkml:prefix_prefix "mediatypes" ;
             linkml:prefix_reference "https://www.iana.org/assignments/media-types/" ],
+        [ linkml:prefix_prefix "pav" ;
+            linkml:prefix_reference "http://purl.org/pav/" ],
+        [ linkml:prefix_prefix "formats" ;
+            linkml:prefix_reference "http://www.w3.org/ns/formats/" ],
+        [ linkml:prefix_prefix "csvw" ;
+            linkml:prefix_reference "http://www.w3.org/ns/csvw#" ],
+        [ linkml:prefix_prefix "sh" ;
+            linkml:prefix_reference "https://w3id.org/shacl/" ],
+        [ linkml:prefix_prefix "dcat" ;
+            linkml:prefix_reference "http://www.w3.org/ns/dcat#" ],
         [ linkml:prefix_prefix "void" ;
             linkml:prefix_reference "http://rdfs.org/ns/void#" ],
-        [ linkml:prefix_prefix "datasets" ;
-            linkml:prefix_reference "https://w3id.org/linkml/report" ],
+        [ linkml:prefix_prefix "frictionless" ;
+            linkml:prefix_reference "https://specs.frictionlessdata.io/" ],
         [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference "https://w3id.org/linkml/" ] ;
     linkml:see_also "https://specs.frictionlessdata.io/data-resource",
         "https://www.w3.org/TR/hcls-dataset/",
         "https://www.w3.org/TR/void/" ;
     linkml:slots [ a linkml:SlotDefinition ;
-            linkml:alias "delimiter" ;
-            linkml:domain_of "FormatDialect" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportbytes" ;
+            linkml:domain_of "DataResource" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__delimiter" ;
-            linkml:owner "FormatDialect" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportdelimiter" ],
+            linkml:mappings "http://www.w3.org/ns/dcat#byteSize" ;
+            linkml:name "bytes" ;
+            linkml:owner "DataResource" ;
+            linkml:range "integer" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#byteSize" ],
         [ a linkml:SlotDefinition ;
             linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
             linkml:definition_uri "https://w3id.org/linkml/reportpath" ;
@@ -250,34 +251,17 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportpath" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "license for the data" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportlicense" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportkeywords" ;
             linkml:domain_of "Information" ;
-            linkml:exact_mappings "https://specs.frictionlessdata.io/licenses" ;
+            linkml:exact_mappings "http://schema.org/keywords" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/license" ;
-            linkml:name "license" ;
+            linkml:mappings "http://www.w3.org/ns/dcat#keyword" ;
+            linkml:multivalued true ;
+            linkml:name "keywords" ;
             linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://purl.org/dc/terms/license" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportprofile" ;
-            linkml:exact_mappings "https://specs.frictionlessdata.io/profiles" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "profile" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportprofile" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportresources" ;
-            linkml:domain_of "DataPackage" ;
-            linkml:exact_mappings "http://schema.org/distribution" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#distribution" ;
-            linkml:multivalued true ;
-            linkml:name "resources" ;
-            linkml:owner "DataPackage" ;
-            linkml:range "DataResource" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#distribution" ],
+            linkml:singular_name "keyword" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#keyword" ],
         [ a linkml:SlotDefinition ;
             linkml:alias "header" ;
             linkml:domain_of "FormatDialect" ;
@@ -287,42 +271,34 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportheader" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "language in which the information is expressed" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportlanguage" ;
-            linkml:domain_of "Information" ;
+            dcterms:description "status of the element" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportstatus" ;
+            linkml:examples [ a linkml:Example ;
+                    linkml:value "bibo:draft" ] ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "language" ;
-            linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportlanguage" ],
+            linkml:mappings "http://example.org/UNKNOWN/bibo/status" ;
+            linkml:name "status" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "http://example.org/UNKNOWN/bibo/status" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "the unique name of th dataset" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportid" ;
+            dcterms:description "time at which the element was created" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportcreated_on" ;
             linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://schema.org/name" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:identifier true ;
-            linkml:mappings "http://purl.org/dc/terms/identifier" ;
-            linkml:name "id" ;
+            linkml:mappings "http://purl.org/pav/createdOn" ;
+            linkml:name "created_on" ;
             linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:required true ;
-            linkml:slot_uri "http://purl.org/dc/terms/identifier" ],
+            linkml:range "datetime" ;
+            linkml:slot_uri "http://purl.org/pav/createdOn" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportmedia_type" ;
-            linkml:domain_of "DataResource" ;
-            linkml:exact_mappings "http://schema.org/encodingFormat",
-                "https://specs.frictionlessdata.io/mediatype" ;
-            linkml:examples [ a linkml:Example ;
-                    linkml:value "text/csv" ],
-                [ a linkml:Example ;
-                    linkml:value "application/json" ] ;
+            dcterms:description "language in which the information is expressed" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportlanguage" ;
+            linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#mediaType" ;
-            linkml:name "media_type" ;
-            linkml:owner "DataResource" ;
+            linkml:name "language" ;
+            linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#mediaType" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportlanguage" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "agent that created the element" ;
             linkml:definition_uri "https://w3id.org/linkml/reportcreated_by" ;
@@ -334,51 +310,55 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "http://purl.org/pav/createdBy" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportformat" ;
-            linkml:domain_of "DataResource" ;
+            linkml:alias "comment_prefix" ;
+            linkml:domain_of "FormatDialect" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/format" ;
-            linkml:name "format" ;
-            linkml:owner "DataResource" ;
-            linkml:range "FormatEnum" ;
-            linkml:slot_uri "http://purl.org/dc/terms/format" ],
+            linkml:name "formatDialect__comment_prefix" ;
+            linkml:owner "FormatDialect" ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportcomment_prefix" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportkeywords" ;
+            dcterms:description "particular version of schema" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportversion" ;
             linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://schema.org/keywords" ;
+            linkml:exact_mappings "http://purl.org/dc/terms/hasVersion",
+                "http://schema.org/version" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#keyword" ;
-            linkml:multivalued true ;
-            linkml:name "keywords" ;
+            linkml:mappings "http://purl.org/pav/version" ;
+            linkml:name "version" ;
             linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:singular_name "keyword" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#keyword" ],
+            linkml:slot_uri "http://purl.org/pav/version" ],
         [ a linkml:SlotDefinition ;
-            linkml:alias "comment_prefix" ;
-            linkml:domain_of "FormatDialect" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportthemes" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__comment_prefix" ;
-            linkml:owner "FormatDialect" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportcomment_prefix" ],
+            linkml:mappings "http://www.w3.org/ns/dcat#theme" ;
+            linkml:multivalued true ;
+            linkml:name "themes" ;
+            linkml:range "uriorcurie" ;
+            linkml:singular_name "theme" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#theme" ],
         [ a linkml:SlotDefinition ;
-            linkml:alias "quote_char" ;
-            linkml:domain_of "FormatDialect" ;
+            dcterms:description "license for the data" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportlicense" ;
+            linkml:domain_of "Information" ;
+            linkml:exact_mappings "https://specs.frictionlessdata.io/licenses" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "formatDialect__quote_char" ;
-            linkml:owner "FormatDialect" ;
+            linkml:mappings "http://purl.org/dc/terms/license" ;
+            linkml:name "license" ;
+            linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportquote_char" ],
+            linkml:slot_uri "http://purl.org/dc/terms/license" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportpage" ;
+            dcterms:description "class in schema which the data object instantiates" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_class" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#landingPage" ;
-            linkml:name "page" ;
+            linkml:is_a "conforms_to" ;
+            linkml:name "conforms_to_class" ;
             linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#landingPage" ],
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_class" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "agent that modified the element" ;
             linkml:definition_uri "https://w3id.org/linkml/reportmodified_by" ;
@@ -388,83 +368,84 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "http://example.org/UNKNOWN/oslc/modifiedBy" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "time at which the element was last updated" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportlast_updated_on" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportresources" ;
+            linkml:domain_of "DataPackage" ;
+            linkml:exact_mappings "http://schema.org/distribution" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/pav/lastUpdatedOn" ;
-            linkml:name "last_updated_on" ;
-            linkml:range "datetime" ;
-            linkml:slot_uri "http://purl.org/pav/lastUpdatedOn" ],
+            linkml:mappings "http://www.w3.org/ns/dcat#distribution" ;
+            linkml:multivalued true ;
+            linkml:name "resources" ;
+            linkml:owner "DataPackage" ;
+            linkml:range "DataResource" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#distribution" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportcompression" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportpage" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "compression" ;
+            linkml:mappings "http://www.w3.org/ns/dcat#landingPage" ;
+            linkml:name "page" ;
             linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportcompression" ],
+            linkml:slot_uri "http://www.w3.org/ns/dcat#landingPage" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "human readable description of the information" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportdescription" ;
-            linkml:domain_of "DataResource",
-                "Information" ;
+            linkml:definition_uri "https://w3id.org/linkml/reporthash" ;
+            linkml:domain_of "DataResource" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/description" ;
-            linkml:name "description" ;
+            linkml:name "hash" ;
             linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://purl.org/dc/terms/description" ],
+            linkml:slot_uri "https://w3id.org/linkml/reporthash" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "particular version of schema" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportversion" ;
+            dcterms:description "A derivation is a transformation of an entity into another, an update of an entity resulting in a new one, or the construction of a new entity based on a pre-existing entity.@en" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportwas_derived_from" ;
             linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://purl.org/dc/terms/hasVersion",
-                "http://schema.org/version" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/pav/version" ;
-            linkml:name "version" ;
+            linkml:mappings "http://www.w3.org/ns/prov#wasDerivedFrom" ;
+            linkml:name "was_derived_from" ;
             linkml:owner "Information" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://purl.org/pav/version" ],
+            linkml:slot_uri "http://www.w3.org/ns/prov#wasDerivedFrom" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reporttest_roles" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportcompression" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:multivalued true ;
-            linkml:name "test_roles" ;
+            linkml:name "compression" ;
             linkml:owner "Information" ;
-            linkml:range "TestRole" ;
-            linkml:slot_uri "https://w3id.org/linkml/reporttest_roles" ],
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportcompression" ],
         [ a linkml:SlotDefinition ;
-            linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportdownload_url" ;
-            linkml:domain_of "Information" ;
-            linkml:exact_mappings "http://schema.org/url" ;
+            dcterms:description "human readable description of the information" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportdescription" ;
+            linkml:domain_of "DataResource",
+                "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#downloadURL" ;
-            linkml:name "download_url" ;
-            linkml:owner "Information" ;
-            linkml:range "uri" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#downloadURL" ],
+            linkml:mappings "http://purl.org/dc/terms/description" ;
+            linkml:name "description" ;
+            linkml:owner "DataResource" ;
+            linkml:range "string" ;
+            linkml:slot_uri "http://purl.org/dc/terms/description" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportissued" ;
+            dcterms:description "the unique name of th dataset" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportid" ;
             linkml:domain_of "Information" ;
+            linkml:exact_mappings "http://schema.org/name" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/issued" ;
-            linkml:name "issued" ;
+            linkml:identifier true ;
+            linkml:mappings "http://purl.org/dc/terms/identifier" ;
+            linkml:name "id" ;
             linkml:owner "Information" ;
-            linkml:range "datetime" ;
-            linkml:slot_uri "http://purl.org/dc/terms/issued" ],
+            linkml:range "string" ;
+            linkml:required true ;
+            linkml:slot_uri "http://purl.org/dc/terms/identifier" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "time at which the element was created" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportcreated_on" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/pav/createdOn" ;
-            linkml:name "created_on" ;
+            linkml:mappings "http://purl.org/dc/terms/conformsTo" ;
+            linkml:name "conforms_to" ;
             linkml:owner "Information" ;
-            linkml:range "datetime" ;
-            linkml:slot_uri "http://purl.org/pav/createdOn" ],
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "http://purl.org/dc/terms/conformsTo" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportpublisher" ;
             linkml:domain_of "Information" ;
@@ -474,6 +455,30 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:owner "Information" ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "http://purl.org/dc/terms/publisher" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reportformat" ;
+            linkml:domain_of "DataResource" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://purl.org/dc/terms/format" ;
+            linkml:name "format" ;
+            linkml:owner "DataResource" ;
+            linkml:range "FormatEnum" ;
+            linkml:slot_uri "http://purl.org/dc/terms/format" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reportmedia_type" ;
+            linkml:domain_of "DataResource" ;
+            linkml:exact_mappings "http://schema.org/encodingFormat",
+                "https://specs.frictionlessdata.io/mediatype" ;
+            linkml:examples [ a linkml:Example ;
+                    linkml:value "application/json" ],
+                [ a linkml:Example ;
+                    linkml:value "text/csv" ] ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://www.w3.org/ns/dcat#mediaType" ;
+            linkml:name "media_type" ;
+            linkml:owner "DataResource" ;
+            linkml:range "string" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#mediaType" ],
         [ a linkml:SlotDefinition ;
             dcterms:description "the official title of the element" ;
             linkml:definition_uri "https://w3id.org/linkml/reporttitle" ;
@@ -485,6 +490,23 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:owner "DataResource" ;
             linkml:range "string" ;
             linkml:slot_uri "http://purl.org/dc/terms/title" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reportissued" ;
+            linkml:domain_of "Information" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://purl.org/dc/terms/issued" ;
+            linkml:name "issued" ;
+            linkml:owner "Information" ;
+            linkml:range "datetime" ;
+            linkml:slot_uri "http://purl.org/dc/terms/issued" ],
+        [ a linkml:SlotDefinition ;
+            linkml:alias "delimiter" ;
+            linkml:domain_of "FormatDialect" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:name "formatDialect__delimiter" ;
+            linkml:owner "FormatDialect" ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportdelimiter" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportencoding" ;
             linkml:domain_of "DataResource" ;
@@ -494,22 +516,32 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportencoding" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reporthash" ;
-            linkml:domain_of "DataResource" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_schema" ;
+            linkml:domain_of "Information" ;
+            linkml:exact_mappings "https://specs.frictionlessdata.io/schema" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:name "hash" ;
-            linkml:owner "DataResource" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reporthash" ],
+            linkml:is_a "conforms_to" ;
+            linkml:name "conforms_to_schema" ;
+            linkml:owner "Information" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_schema" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to" ;
+            linkml:definition_uri "https://w3id.org/linkml/reporttest_roles" ;
             linkml:domain_of "Information" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://purl.org/dc/terms/conformsTo" ;
-            linkml:name "conforms_to" ;
+            linkml:multivalued true ;
+            linkml:name "test_roles" ;
             linkml:owner "Information" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://purl.org/dc/terms/conformsTo" ],
+            linkml:range "TestRole" ;
+            linkml:slot_uri "https://w3id.org/linkml/reporttest_roles" ],
+        [ a linkml:SlotDefinition ;
+            dcterms:description "time at which the element was last updated" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportlast_updated_on" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:mappings "http://purl.org/pav/lastUpdatedOn" ;
+            linkml:name "last_updated_on" ;
+            linkml:range "datetime" ;
+            linkml:slot_uri "http://purl.org/pav/lastUpdatedOn" ],
         [ a linkml:SlotDefinition ;
             linkml:alias "double_quote" ;
             linkml:domain_of "FormatDialect" ;
@@ -519,24 +551,31 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportdouble_quote" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportbytes" ;
-            linkml:domain_of "DataResource" ;
+            linkml:close_mappings "https://specs.frictionlessdata.io/path" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportdownload_url" ;
+            linkml:domain_of "Information" ;
+            linkml:exact_mappings "http://schema.org/url" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#byteSize" ;
-            linkml:name "bytes" ;
-            linkml:owner "DataResource" ;
-            linkml:range "integer" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#byteSize" ],
+            linkml:mappings "http://www.w3.org/ns/dcat#downloadURL" ;
+            linkml:name "download_url" ;
+            linkml:owner "Information" ;
+            linkml:range "uri" ;
+            linkml:slot_uri "http://www.w3.org/ns/dcat#downloadURL" ],
         [ a linkml:SlotDefinition ;
-            dcterms:description "status of the element" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportstatus" ;
-            linkml:examples [ a linkml:Example ;
-                    linkml:value "bibo:draft" ] ;
+            linkml:definition_uri "https://w3id.org/linkml/reportprofile" ;
+            linkml:exact_mappings "https://specs.frictionlessdata.io/profiles" ;
             linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://example.org/UNKNOWN/bibo/status" ;
-            linkml:name "status" ;
+            linkml:name "profile" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://example.org/UNKNOWN/bibo/status" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportprofile" ],
+        [ a linkml:SlotDefinition ;
+            linkml:alias "quote_char" ;
+            linkml:domain_of "FormatDialect" ;
+            linkml:from_schema "https://w3id.org/linkml/datasets" ;
+            linkml:name "formatDialect__quote_char" ;
+            linkml:owner "FormatDialect" ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportquote_char" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportdialect" ;
             linkml:domain_of "DataResource" ;
@@ -545,50 +584,54 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "dialect" ;
             linkml:owner "DataResource" ;
             linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/csvw#dialect" ],
-        [ a linkml:SlotDefinition ;
-            dcterms:description "class in schema which the data object instantiates" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_class" ;
-            linkml:domain_of "Information" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:is_a "conforms_to" ;
-            linkml:name "conforms_to_class" ;
-            linkml:owner "Information" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_class" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportconforms_to_schema" ;
-            linkml:domain_of "Information" ;
-            linkml:exact_mappings "https://specs.frictionlessdata.io/schema" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:is_a "conforms_to" ;
-            linkml:name "conforms_to_schema" ;
-            linkml:owner "Information" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportconforms_to_schema" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportthemes" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/dcat#theme" ;
-            linkml:multivalued true ;
-            linkml:name "themes" ;
-            linkml:range "uriorcurie" ;
-            linkml:singular_name "theme" ;
-            linkml:slot_uri "http://www.w3.org/ns/dcat#theme" ],
-        [ a linkml:SlotDefinition ;
-            dcterms:description "A derivation is a transformation of an entity into another, an update of an entity resulting in a new one, or the construction of a new entity based on a pre-existing entity.@en" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportwas_derived_from" ;
-            linkml:domain_of "Information" ;
-            linkml:from_schema "https://w3id.org/linkml/datasets" ;
-            linkml:mappings "http://www.w3.org/ns/prov#wasDerivedFrom" ;
-            linkml:name "was_derived_from" ;
-            linkml:owner "Information" ;
-            linkml:range "string" ;
-            linkml:slot_uri "http://www.w3.org/ns/prov#wasDerivedFrom" ] ;
+            linkml:slot_uri "http://www.w3.org/ns/csvw#dialect" ] ;
     linkml:source_file "datasets.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 7649 ;
     linkml:types [ a linkml:TypeDefinition ;
+            dcterms:description "A real number that conforms to the xsd:double specification" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "The combination of a date and time" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "datetime" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "A real number that conforms to the xsd:float specification" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "a URI or a CURIE" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "uriorcurie" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+        [ a linkml:TypeDefinition ;
+            dcterms:description "A binary (true or false) value" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+        [ a linkml:TypeDefinition ;
             dcterms:description "Prefix part of CURIE" ;
             linkml:base "NCName" ;
             linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
@@ -598,23 +641,15 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "A time object represents a (local) time of day, independent of any particular day" ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            dcterms:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
+            linkml:name "date" ;
             linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "An integer" ;
             linkml:base "int" ;
@@ -624,14 +659,15 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "integer" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "The combination of a date and time" ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            dcterms:description "A URI or CURIE that represents an object in the model." ;
+            linkml:base "ElementIdentifier" ;
+            linkml:comments "Used for inheritence and type checking" ;
+            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
+            linkml:name "objectidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/ns/shex#iri" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:base "NodeIdentifier" ;
@@ -641,14 +677,6 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A real number that conforms to the xsd:float specification" ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
         [ a linkml:TypeDefinition ;
             dcterms:description "A character string" ;
             linkml:base "str" ;
@@ -667,51 +695,23 @@ linkml:datasets a linkml:SchemaDefinition ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "a URI or a CURIE" ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A URI or CURIE that represents an object in the model." ;
-            linkml:base "ElementIdentifier" ;
-            linkml:comments "Used for inheritence and type checking" ;
-            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
+            dcterms:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "objectidentifier" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#iri" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A real number that conforms to the xsd:double specification" ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
-        [ a linkml:TypeDefinition ;
-            dcterms:description "A binary (true or false) value" ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            dcterms:description "a date (year, month and day) in an idealized calendar" ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            dcterms:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ] .
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ] .
 
 
 
diff --git a/linkml_model/rdf/extensions.model.ttl b/linkml_model/rdf/extensions.model.ttl
index d8f6bcf3..b85fd5b9 100644
--- a/linkml_model/rdf/extensions.model.ttl
+++ b/linkml_model/rdf/extensions.model.ttl
@@ -4,6 +4,15 @@
 
 [] a linkml:SchemaDefinition ;
     linkml:classes [ a linkml:ClassDefinition ;
+            linkml:class_uri "https://w3id.org/linkml/Extensible" ;
+            linkml:definition_uri "https://w3id.org/linkml/Extensible" ;
+            linkml:description "mixin for classes that support extension" ;
+            linkml:from_schema "https://w3id.org/linkml/extensions" ;
+            linkml:mixin true ;
+            linkml:name "Extensible" ;
+            linkml:slot_usage [ ] ;
+            linkml:slots "extensions" ],
+        [ a linkml:ClassDefinition ;
             linkml:class_uri "https://w3id.org/linkml/Extension" ;
             linkml:definition_uri "https://w3id.org/linkml/Extension" ;
             linkml:description "a tag/value pair used to add non-model information to an entry" ;
@@ -12,21 +21,12 @@
             linkml:slot_usage [ ] ;
             linkml:slots "extension_tag",
                 "extension_value",
-                "extensions" ],
-        [ a linkml:ClassDefinition ;
-            linkml:class_uri "https://w3id.org/linkml/Extensible" ;
-            linkml:definition_uri "https://w3id.org/linkml/Extensible" ;
-            linkml:description "mixin for classes that support extension" ;
-            linkml:from_schema "https://w3id.org/linkml/extensions" ;
-            linkml:mixin true ;
-            linkml:name "Extensible" ;
-            linkml:slot_usage [ ] ;
-            linkml:slots "extensions" ] ;
+                "extensions" ] ;
     linkml:default_prefix "linkml" ;
     linkml:default_range "string" ;
     linkml:description "Extension mixin" ;
     linkml:emit_prefixes "linkml" ;
-    linkml:generation_date "2021-12-28T23:39:47" ;
+    linkml:generation_date "2022-01-22T01:10:20" ;
     linkml:id "https://w3id.org/linkml/extensions" ;
     linkml:imports "linkml:types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
@@ -73,25 +73,28 @@
             linkml:required true ;
             linkml:slot_uri "https://w3id.org/linkml/value" ] ;
     linkml:source_file "extensions.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 1057 ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
+            linkml:base "ElementIdentifier" ;
+            linkml:comments "Used for inheritence and type checking" ;
+            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
+            linkml:description "A URI or CURIE that represents an object in the model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uri" ;
+            linkml:name "objectidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:uri "http://www.w3.org/ns/shex#iri" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:description "An integer" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
             linkml:definition_uri "https://w3id.org/linkml/Double" ;
@@ -101,43 +104,30 @@
             linkml:name "double" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "NCName" ;
-            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
-            linkml:description "Prefix part of CURIE" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "ncname" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "datetime" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "ElementIdentifier" ;
-            linkml:comments "Used for inheritence and type checking" ;
-            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
-            linkml:description "A URI or CURIE that represents an object in the model." ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "objectidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#iri" ],
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
             linkml:base "NodeIdentifier" ;
             linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
@@ -147,22 +137,6 @@
             linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
             linkml:base "Bool" ;
             linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
@@ -173,13 +147,21 @@
             linkml:repr "bool" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "string" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
+            linkml:description "An integer" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
         [ a linkml:TypeDefinition ;
             linkml:base "XSDDate" ;
             linkml:definition_uri "https://w3id.org/linkml/Date" ;
@@ -191,14 +173,32 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
+            linkml:base "NCName" ;
+            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
+            linkml:description "Prefix part of CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
+            linkml:name "ncname" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "uri" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "uriorcurie" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ] ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ] ;
     linkml:version "2.0.0" .
 
 
diff --git a/linkml_model/rdf/extensions.ttl b/linkml_model/rdf/extensions.ttl
index 17ad21ff..a8062602 100644
--- a/linkml_model/rdf/extensions.ttl
+++ b/linkml_model/rdf/extensions.ttl
@@ -4,6 +4,15 @@
 
 [] a linkml:SchemaDefinition ;
     linkml:classes [ a linkml:ClassDefinition ;
+            linkml:class_uri "https://w3id.org/linkml/Extensible" ;
+            linkml:definition_uri "https://w3id.org/linkml/Extensible" ;
+            linkml:description "mixin for classes that support extension" ;
+            linkml:from_schema "https://w3id.org/linkml/extensions" ;
+            linkml:mixin true ;
+            linkml:name "Extensible" ;
+            linkml:slot_usage [ ] ;
+            linkml:slots "extensions" ],
+        [ a linkml:ClassDefinition ;
             linkml:class_uri "https://w3id.org/linkml/Extension" ;
             linkml:definition_uri "https://w3id.org/linkml/Extension" ;
             linkml:description "a tag/value pair used to add non-model information to an entry" ;
@@ -12,21 +21,12 @@
             linkml:slot_usage [ ] ;
             linkml:slots "extension_tag",
                 "extension_value",
-                "extensions" ],
-        [ a linkml:ClassDefinition ;
-            linkml:class_uri "https://w3id.org/linkml/Extensible" ;
-            linkml:definition_uri "https://w3id.org/linkml/Extensible" ;
-            linkml:description "mixin for classes that support extension" ;
-            linkml:from_schema "https://w3id.org/linkml/extensions" ;
-            linkml:mixin true ;
-            linkml:name "Extensible" ;
-            linkml:slot_usage [ ] ;
-            linkml:slots "extensions" ] ;
+                "extensions" ] ;
     linkml:default_prefix "linkml" ;
     linkml:default_range "string" ;
     linkml:description "Extension mixin" ;
     linkml:emit_prefixes "linkml" ;
-    linkml:generation_date "2021-12-28T23:39:33" ;
+    linkml:generation_date "2022-01-22T01:10:06" ;
     linkml:id "https://w3id.org/linkml/extensions" ;
     linkml:imports "linkml:types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
@@ -35,19 +35,6 @@
     linkml:prefixes [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference "https://w3id.org/linkml/" ] ;
     linkml:slots [ a linkml:SlotDefinition ;
-            linkml:alias "tag" ;
-            linkml:definition_uri "https://w3id.org/linkml/extension_tag" ;
-            linkml:description "a tag associated with an extension" ;
-            linkml:domain "Extension" ;
-            linkml:domain_of "Extension" ;
-            linkml:from_schema "https://w3id.org/linkml/extensions" ;
-            linkml:key true ;
-            linkml:name "extension_tag" ;
-            linkml:owner "Extension" ;
-            linkml:range "uriorcurie" ;
-            linkml:required true ;
-            linkml:slot_uri "https://w3id.org/linkml/tag" ],
-        [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/extensions" ;
             linkml:description "a tag/text tuple attached to an arbitrary element" ;
             linkml:domain "Extensible" ;
@@ -60,6 +47,19 @@
             linkml:owner "Extensible" ;
             linkml:range "Extension" ;
             linkml:slot_uri "https://w3id.org/linkml/extensions" ],
+        [ a linkml:SlotDefinition ;
+            linkml:alias "tag" ;
+            linkml:definition_uri "https://w3id.org/linkml/extension_tag" ;
+            linkml:description "a tag associated with an extension" ;
+            linkml:domain "Extension" ;
+            linkml:domain_of "Extension" ;
+            linkml:from_schema "https://w3id.org/linkml/extensions" ;
+            linkml:key true ;
+            linkml:name "extension_tag" ;
+            linkml:owner "Extension" ;
+            linkml:range "uriorcurie" ;
+            linkml:required true ;
+            linkml:slot_uri "https://w3id.org/linkml/tag" ],
         [ a linkml:SlotDefinition ;
             linkml:alias "value" ;
             linkml:definition_uri "https://w3id.org/linkml/extension_value" ;
@@ -73,7 +73,7 @@
             linkml:required true ;
             linkml:slot_uri "https://w3id.org/linkml/value" ] ;
     linkml:source_file "extensions.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 1057 ;
     linkml:types [ a linkml:TypeDefinition ;
             linkml:base "NodeIdentifier" ;
@@ -85,22 +85,14 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NCName" ;
-            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
-            linkml:description "Prefix part of CURIE" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "ncname" ;
+            linkml:name "datetime" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "string" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "Decimal" ;
             linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
@@ -110,23 +102,15 @@
             linkml:name "decimal" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uri" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "ElementIdentifier" ;
             linkml:comments "Used for inheritence and type checking" ;
@@ -138,15 +122,38 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#iri" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
-            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "NCName" ;
+            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
+            linkml:description "Prefix part of CURIE" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "ncname" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:description "A real number that conforms to the xsd:double specification" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
             linkml:base "URIorCURIE" ;
             linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
@@ -157,40 +164,33 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:description "A real number that conforms to the xsd:double specification" ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
+            linkml:name "uri" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:description "a date (year, month and day) in an idealized calendar" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
+            linkml:name "date" ;
             linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
             linkml:base "int" ;
             linkml:definition_uri "https://w3id.org/linkml/Integer" ;
diff --git a/linkml_model/rdf/mappings.model.ttl b/linkml_model/rdf/mappings.model.ttl
index 4ad47e2c..11da5951 100644
--- a/linkml_model/rdf/mappings.model.ttl
+++ b/linkml_model/rdf/mappings.model.ttl
@@ -16,38 +16,30 @@
         "rdfs",
         "skos",
         "xsd" ;
-    linkml:generation_date "2021-12-28T23:39:45" ;
+    linkml:generation_date "2022-01-22T01:10:13" ;
     linkml:id "https://w3id.org/linkml/mappings" ;
     linkml:imports "linkml:types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:name "mappings" ;
-    linkml:prefixes [ linkml:prefix_prefix "OIO" ;
-            linkml:prefix_reference "http://www.geneontology.org/formats/oboInOwl#" ],
-        [ linkml:prefix_prefix "skos" ;
-            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
-        [ linkml:prefix_prefix "IAO" ;
+    linkml:prefixes [ linkml:prefix_prefix "IAO" ;
             linkml:prefix_reference "http://purl.obolibrary.org/obo/IAO_" ],
         [ linkml:prefix_prefix "linkml" ;
-            linkml:prefix_reference "https://w3id.org/linkml/" ] ;
+            linkml:prefix_reference "https://w3id.org/linkml/" ],
+        [ linkml:prefix_prefix "skos" ;
+            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
+        [ linkml:prefix_prefix "OIO" ;
+            linkml:prefix_reference "http://www.geneontology.org/formats/oboInOwl#" ] ;
     linkml:slots [ a linkml:SlotDefinition ;
-            skos:mappingRelation OIO:consider ;
-            linkml:definition_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ;
-            linkml:description "When an element is deprecated, it can be potentially replaced by this uri or curie" ;
-            linkml:from_schema "https://w3id.org/linkml/mappings" ;
-            linkml:name "deprecated_element_has_possible_replacement" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ],
-        [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:narrowMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/narrow_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have narrower meaning." ;
+            skos:mappingRelation skos:exactMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/exact_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have identical meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "narrow_mappings" ;
+            linkml:name "exact_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#narrowMatch" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#exactMatch" ],
         [ a linkml:SlotDefinition ;
             skos:mappingRelation <http://purl.obolibrary.org/obo/IAO_0100001> ;
             linkml:definition_uri "https://w3id.org/linkml/deprecated_element_has_exact_replacement" ;
@@ -57,76 +49,71 @@
             linkml:range "uriorcurie" ;
             linkml:slot_uri "https://w3id.org/linkml/deprecated_element_has_exact_replacement" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:mappingRelation ;
-            linkml:definition_uri "https://w3id.org/linkml/mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." ;
+            skos:mappingRelation skos:relatedMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/related_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have related meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
+            linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "mappings" ;
+            linkml:name "related_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#mappingRelation" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#relatedMatch" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:exactMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/exact_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have identical meaning." ;
+            skos:mappingRelation skos:broadMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/broad_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have broader meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "exact_mappings" ;
+            linkml:name "broad_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#exactMatch" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#broadMatch" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:closeMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/close_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have close meaning." ;
+            skos:mappingRelation OIO:consider ;
+            linkml:definition_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ;
+            linkml:description "When an element is deprecated, it can be potentially replaced by this uri or curie" ;
+            linkml:from_schema "https://w3id.org/linkml/mappings" ;
+            linkml:name "deprecated_element_has_possible_replacement" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ],
+        [ a linkml:SlotDefinition ;
+            skos:mappingRelation skos:narrowMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/narrow_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have narrower meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "close_mappings" ;
+            linkml:name "narrow_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#closeMatch" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#narrowMatch" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:relatedMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/related_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have related meaning." ;
+            skos:mappingRelation skos:mappingRelation ;
+            linkml:aliases "alternate identifiers",
+                "alternate ids",
+                "identifiers",
+                "xrefs" ;
+            linkml:definition_uri "https://w3id.org/linkml/mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
-            linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "related_mappings" ;
+            linkml:name "mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#relatedMatch" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#mappingRelation" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:broadMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/broad_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have broader meaning." ;
+            skos:mappingRelation skos:closeMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/close_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have close meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "broad_mappings" ;
+            linkml:name "close_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#broadMatch" ] ;
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#closeMatch" ] ;
     linkml:source_file "mappings.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
-    linkml:source_file_size 2656 ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
+    linkml:source_file_size 2755 ;
     linkml:title "LinkML Schema Mappings" ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
-        [ a linkml:TypeDefinition ;
             linkml:base "XSDDate" ;
             linkml:definition_uri "https://w3id.org/linkml/Date" ;
             linkml:description "a date (year, month and day) in an idealized calendar" ;
@@ -137,13 +124,14 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
             linkml:definition_uri "https://w3id.org/linkml/Double" ;
@@ -153,14 +141,15 @@
             linkml:name "double" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "nodeidentifier" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "int" ;
             linkml:definition_uri "https://w3id.org/linkml/Integer" ;
@@ -169,15 +158,6 @@
             linkml:imported_from "linkml:types" ;
             linkml:name "integer" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "str" ;
             linkml:definition_uri "https://w3id.org/linkml/String" ;
@@ -187,24 +167,48 @@
             linkml:name "string" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:name "uri" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "NCName" ;
+            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
+            linkml:description "Prefix part of CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "ncname" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "nodeidentifier" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
             linkml:base "ElementIdentifier" ;
             linkml:comments "Used for inheritence and type checking" ;
@@ -216,21 +220,21 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#iri" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NCName" ;
-            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
-            linkml:description "Prefix part of CURIE" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "ncname" ;
+            linkml:name "datetime" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uri" ;
+            linkml:name "uriorcurie" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ] ;
     linkml:version "2.0.0" .
diff --git a/linkml_model/rdf/mappings.ttl b/linkml_model/rdf/mappings.ttl
index 637d1745..7afd6c90 100644
--- a/linkml_model/rdf/mappings.ttl
+++ b/linkml_model/rdf/mappings.ttl
@@ -16,7 +16,7 @@
         "rdfs",
         "skos",
         "xsd" ;
-    linkml:generation_date "2021-12-28T23:39:31" ;
+    linkml:generation_date "2022-01-22T01:09:59" ;
     linkml:id "https://w3id.org/linkml/mappings" ;
     linkml:imports "linkml:types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
@@ -26,11 +26,29 @@
             linkml:prefix_reference "http://purl.obolibrary.org/obo/IAO_" ],
         [ linkml:prefix_prefix "OIO" ;
             linkml:prefix_reference "http://www.geneontology.org/formats/oboInOwl#" ],
-        [ linkml:prefix_prefix "linkml" ;
-            linkml:prefix_reference "https://w3id.org/linkml/" ],
         [ linkml:prefix_prefix "skos" ;
-            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ] ;
+            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
+        [ linkml:prefix_prefix "linkml" ;
+            linkml:prefix_reference "https://w3id.org/linkml/" ] ;
     linkml:slots [ a linkml:SlotDefinition ;
+            skos:mappingRelation skos:narrowMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/narrow_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have narrower meaning." ;
+            linkml:from_schema "https://w3id.org/linkml/mappings" ;
+            linkml:is_a "mappings" ;
+            linkml:multivalued true ;
+            linkml:name "narrow_mappings" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#narrowMatch" ],
+        [ a linkml:SlotDefinition ;
+            skos:mappingRelation OIO:consider ;
+            linkml:definition_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ;
+            linkml:description "When an element is deprecated, it can be potentially replaced by this uri or curie" ;
+            linkml:from_schema "https://w3id.org/linkml/mappings" ;
+            linkml:name "deprecated_element_has_possible_replacement" ;
+            linkml:range "uriorcurie" ;
+            linkml:slot_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ],
+        [ a linkml:SlotDefinition ;
             skos:mappingRelation <http://purl.obolibrary.org/obo/IAO_0100001> ;
             linkml:definition_uri "https://w3id.org/linkml/deprecated_element_has_exact_replacement" ;
             linkml:description "When an element is deprecated, it can be automatically replaced by this uri or curie" ;
@@ -38,18 +56,12 @@
             linkml:name "deprecated_element_has_exact_replacement" ;
             linkml:range "uriorcurie" ;
             linkml:slot_uri "https://w3id.org/linkml/deprecated_element_has_exact_replacement" ],
-        [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:broadMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/broad_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have broader meaning." ;
-            linkml:from_schema "https://w3id.org/linkml/mappings" ;
-            linkml:is_a "mappings" ;
-            linkml:multivalued true ;
-            linkml:name "broad_mappings" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#broadMatch" ],
         [ a linkml:SlotDefinition ;
             skos:mappingRelation skos:mappingRelation ;
+            linkml:aliases "alternate identifiers",
+                "alternate ids",
+                "identifiers",
+                "xrefs" ;
             linkml:definition_uri "https://w3id.org/linkml/mappings" ;
             linkml:description "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
@@ -58,58 +70,58 @@
             linkml:range "uriorcurie" ;
             linkml:slot_uri "http://www.w3.org/2004/02/skos/core#mappingRelation" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:relatedMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/related_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have related meaning." ;
+            skos:mappingRelation skos:closeMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/close_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have close meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "related_mappings" ;
-            linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#relatedMatch" ],
-        [ a linkml:SlotDefinition ;
-            skos:mappingRelation OIO:consider ;
-            linkml:definition_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ;
-            linkml:description "When an element is deprecated, it can be potentially replaced by this uri or curie" ;
-            linkml:from_schema "https://w3id.org/linkml/mappings" ;
-            linkml:name "deprecated_element_has_possible_replacement" ;
+            linkml:name "close_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "https://w3id.org/linkml/deprecated_element_has_possible_replacement" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#closeMatch" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:narrowMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/narrow_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have narrower meaning." ;
+            skos:mappingRelation skos:exactMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/exact_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have identical meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "narrow_mappings" ;
+            linkml:name "exact_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#narrowMatch" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#exactMatch" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:closeMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/close_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have close meaning." ;
+            skos:mappingRelation skos:relatedMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/related_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have related meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "close_mappings" ;
+            linkml:name "related_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#closeMatch" ],
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#relatedMatch" ],
         [ a linkml:SlotDefinition ;
-            skos:mappingRelation skos:exactMatch ;
-            linkml:definition_uri "https://w3id.org/linkml/exact_mappings" ;
-            linkml:description "A list of terms from different schemas or terminology systems that have identical meaning." ;
+            skos:mappingRelation skos:broadMatch ;
+            linkml:definition_uri "https://w3id.org/linkml/broad_mappings" ;
+            linkml:description "A list of terms from different schemas or terminology systems that have broader meaning." ;
             linkml:from_schema "https://w3id.org/linkml/mappings" ;
             linkml:is_a "mappings" ;
             linkml:multivalued true ;
-            linkml:name "exact_mappings" ;
+            linkml:name "broad_mappings" ;
             linkml:range "uriorcurie" ;
-            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#exactMatch" ] ;
+            linkml:slot_uri "http://www.w3.org/2004/02/skos/core#broadMatch" ] ;
     linkml:source_file "mappings.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
-    linkml:source_file_size 2656 ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
+    linkml:source_file_size 2755 ;
     linkml:title "LinkML Schema Mappings" ;
     linkml:types [ a linkml:TypeDefinition ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
+            linkml:description "An integer" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+        [ a linkml:TypeDefinition ;
             linkml:base "NodeIdentifier" ;
             linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
             linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
@@ -119,31 +131,29 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:description "An integer" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "ElementIdentifier" ;
-            linkml:comments "Used for inheritence and type checking" ;
-            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
-            linkml:description "A URI or CURIE that represents an object in the model." ;
+            linkml:base "NCName" ;
+            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
+            linkml:description "Prefix part of CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "objectidentifier" ;
+            linkml:name "ncname" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#iri" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "datetime" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
@@ -155,40 +165,23 @@
             linkml:name "double" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "uri" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:description "a date (year, month and day) in an idealized calendar" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
+            linkml:name "date" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NCName" ;
-            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
-            linkml:description "Prefix part of CURIE" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "ncname" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
             linkml:base "str" ;
             linkml:definition_uri "https://w3id.org/linkml/String" ;
@@ -197,6 +190,15 @@
             linkml:imported_from "linkml:types" ;
             linkml:name "string" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "uri" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
             linkml:base "Bool" ;
             linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
@@ -207,23 +209,15 @@
             linkml:repr "bool" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
-            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
+            linkml:name "time" ;
             linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "URIorCURIE" ;
             linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
@@ -232,7 +226,17 @@
             linkml:imported_from "linkml:types" ;
             linkml:name "uriorcurie" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ] ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "ElementIdentifier" ;
+            linkml:comments "Used for inheritence and type checking" ;
+            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
+            linkml:description "A URI or CURIE that represents an object in the model." ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "objectidentifier" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/ns/shex#iri" ] ;
     linkml:version "2.0.0" .
 
 
diff --git a/linkml_model/rdf/meta.model.ttl b/linkml_model/rdf/meta.model.ttl
index 86ff04dd..3a299812 100644
--- a/linkml_model/rdf/meta.model.ttl
+++ b/linkml_model/rdf/meta.model.ttl
@@ -116,6 +116,21 @@ linkml:class_definition_apply_to a linkml:SlotDefinition ;
     linkml:slot_uri linkml:apply_to ;
     linkml:usage_slot_name "apply_to" .
 
+linkml:class_definition_disjoint_with a linkml:SlotDefinition ;
+    skos:definition "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances" ;
+    skos:inScheme linkml:meta ;
+    skos:prefLabel "disjoint_with" ;
+    linkml:definition_uri linkml:disjoint_with ;
+    linkml:domain linkml:ClassDefinition ;
+    linkml:domain_of linkml:ClassDefinition ;
+    linkml:is_a linkml:disjoint_with ;
+    linkml:is_usage_slot true ;
+    linkml:multivalued true ;
+    linkml:owner linkml:ClassDefinition ;
+    linkml:range linkml:ClassDefinition ;
+    linkml:slot_uri linkml:disjoint_with ;
+    linkml:usage_slot_name "disjoint_with" .
+
 linkml:class_definition_is_a a linkml:SlotDefinition ;
     skos:definition "specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded" ;
     skos:inScheme linkml:meta ;
@@ -316,6 +331,8 @@ linkml:relational_role_enum skos:definition "enumeration of roles a slot on a re
 linkml:schema_definition_name a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
     rdfs:seeAlso <https://en.wikipedia.org/wiki/Data_element_name> ;
+    skos:altLabel "short name",
+        "unique name" ;
     skos:definition "the unique name of the element within the context of the schema.  Name is combined with the default prefix to form the globally unique subject of the target class." ;
     skos:exactMatch schema1:name ;
     skos:inScheme linkml:meta ;
@@ -348,6 +365,21 @@ linkml:slot_definition_apply_to a linkml:SlotDefinition ;
     linkml:slot_uri linkml:apply_to ;
     linkml:usage_slot_name "apply_to" .
 
+linkml:slot_definition_disjoint_with a linkml:SlotDefinition ;
+    skos:definition "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances" ;
+    skos:inScheme linkml:meta ;
+    skos:prefLabel "disjoint_with" ;
+    linkml:definition_uri linkml:disjoint_with ;
+    linkml:domain linkml:SlotDefinition ;
+    linkml:domain_of linkml:SlotDefinition ;
+    linkml:is_a linkml:disjoint_with ;
+    linkml:is_usage_slot true ;
+    linkml:multivalued true ;
+    linkml:owner linkml:SlotDefinition ;
+    linkml:range linkml:SlotDefinition ;
+    linkml:slot_uri linkml:disjoint_with ;
+    linkml:usage_slot_name "disjoint_with" .
+
 linkml:slot_definition_is_a a linkml:SlotDefinition ;
     skos:definition "specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded" ;
     skos:inScheme linkml:meta ;
@@ -595,6 +627,7 @@ linkml:ClassLevelRule a linkml:ClassDefinition ;
     linkml:slot_usage [ ] .
 
 linkml:asymmetric a linkml:SlotDefinition ;
+    skos:closeMatch owl:AsymmetricProperty ;
     skos:definition "If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i" ;
     skos:inScheme linkml:meta ;
     skos:note "asymmetry is the combination of antisymmetry and irreflexivity" ;
@@ -716,6 +749,7 @@ linkml:class_expression_none_of a linkml:SlotDefinition ;
     linkml:usage_slot_name "none_of" .
 
 linkml:class_uri a linkml:SlotDefinition ;
+    skos:altLabel "public ID" ;
     skos:definition "URI of the class in an RDF environment" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:class_uri ;
@@ -1051,6 +1085,7 @@ representation and output.""" ;
     linkml:slot_uri linkml:inlined_as_list .
 
 linkml:irreflexive a linkml:SlotDefinition ;
+    skos:closeMatch owl:IrreflexiveProperty ;
     skos:definition "If s is irreflexive, then there exists no i such i.s=i" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:irreflexive ;
@@ -1123,6 +1158,7 @@ linkml:locally_reflexive a linkml:SlotDefinition ;
     linkml:slot_uri linkml:locally_reflexive .
 
 linkml:meaning a linkml:SlotDefinition ;
+    skos:altLabel "PV meaning" ;
     skos:definition "the value meaning (in the 11179 sense) of a permissible value" ;
     skos:editorialNote "we may want to change the range of this (and other) elements in the model to an entitydescription type construct" ;
     skos:inScheme linkml:meta ;
@@ -1165,6 +1201,18 @@ linkml:open_world a linkml:SlotDefinition ;
     linkml:range linkml:boolean ;
     linkml:slot_uri linkml:open_world .
 
+linkml:owned_by a linkml:SlotDefinition ;
+    skos:altLabel "owner",
+        "steward" ;
+    skos:closeMatch rdfs:isDefinedBy ;
+    skos:definition "agent that owns or is the steward of the element" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:owned_by ;
+    linkml:domain linkml:Element ;
+    linkml:owner linkml:owned_by ;
+    linkml:range linkml:uriorcurie ;
+    linkml:slot_uri linkml:owned_by .
+
 linkml:owner a linkml:SlotDefinition ;
     skos:definition "the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot" ;
     skos:inScheme linkml:meta ;
@@ -1273,6 +1321,7 @@ linkml:readonly a linkml:SlotDefinition ;
     linkml:slot_uri linkml:readonly .
 
 linkml:reflexive a linkml:SlotDefinition ;
+    skos:closeMatch owl:ReflexiveProperty ;
     skos:definition "If s is reflexive, then i.s=i for all instances i" ;
     skos:inScheme linkml:meta ;
     skos:note "it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive" ;
@@ -1446,6 +1495,7 @@ linkml:slot_expression_none_of a linkml:SlotDefinition ;
     linkml:usage_slot_name "none_of" .
 
 linkml:slot_uri a linkml:SlotDefinition ;
+    skos:altLabel "public ID" ;
     skos:definition "predicate of this slot for semantic web application" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:slot_uri ;
@@ -1518,6 +1568,7 @@ linkml:subsets a linkml:SlotDefinition ;
     linkml:slot_uri linkml:subsets .
 
 linkml:symmetric a linkml:SlotDefinition ;
+    skos:closeMatch owl:SymmetricProperty ;
     skos:definition "If s is symmetric, and i.s=v, then v.s=i" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:symmetric ;
@@ -1529,6 +1580,7 @@ linkml:symmetric a linkml:SlotDefinition ;
     linkml:slot_uri linkml:symmetric .
 
 linkml:text a linkml:SlotDefinition ;
+    skos:altLabel "value" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:text ;
     linkml:domain linkml:PermissibleValue ;
@@ -1540,6 +1592,7 @@ linkml:text a linkml:SlotDefinition ;
     linkml:slot_uri linkml:text .
 
 linkml:transitive a linkml:SlotDefinition ;
+    skos:closeMatch owl:TransitiveProperty ;
     skos:definition "If s is transitive, and i.s=z, and s.s=j, then i.s=j" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:transitive ;
@@ -1667,6 +1720,18 @@ linkml:union_of a linkml:SlotDefinition ;
     linkml:range linkml:ClassDefinition ;
     linkml:slot_uri linkml:union_of .
 
+linkml:unique_key_name a linkml:SlotDefinition ;
+    skos:definition "name of the unique key" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:unique_key_name ;
+    linkml:domain linkml:UniqueKey ;
+    linkml:domain_of linkml:UniqueKey ;
+    linkml:key true ;
+    linkml:owner linkml:UniqueKey ;
+    linkml:range linkml:string ;
+    linkml:required true ;
+    linkml:slot_uri linkml:unique_key_name .
+
 linkml:unique_key_slots a linkml:SlotDefinition ;
     skos:definition "list of slot names that form a key" ;
     skos:inScheme linkml:meta ;
@@ -1893,6 +1958,17 @@ all_members:
     linkml:range linkml:SlotDefinition ;
     linkml:slot_uri linkml:all_members .
 
+linkml:children_are_mutually_disjoint a linkml:SlotDefinition ;
+    skos:definition "If true then all direct is_a children are mutually disjoint and share no instances in common" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:children_are_mutually_disjoint ;
+    linkml:domain linkml:Definition ;
+    linkml:domain_of linkml:ClassDefinition,
+        linkml:SlotDefinition ;
+    linkml:owner linkml:children_are_mutually_disjoint ;
+    linkml:range linkml:boolean ;
+    linkml:slot_uri linkml:children_are_mutually_disjoint .
+
 linkml:created_by a linkml:SlotDefinition ;
     skos:definition "agent that created the element" ;
     skos:inScheme linkml:meta ;
@@ -2043,6 +2119,7 @@ linkml:slot_names_unique a linkml:SlotDefinition ;
     linkml:slot_uri linkml:slot_names_unique .
 
 linkml:status a linkml:SlotDefinition ;
+    skos:altLabel "workflow status" ;
     skos:definition "status of the element" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation bibo:status ;
@@ -2097,34 +2174,6 @@ linkml:AnonymousTypeExpression a linkml:ClassDefinition ;
         linkml:type_expression_exactly_one_of,
         linkml:type_expression_none_of .
 
-linkml:UniqueKey a linkml:ClassDefinition ;
-    skos:definition "a collection of slots whose values uniquely identify an instance of a class" ;
-    skos:inScheme linkml:meta ;
-    linkml:class_uri linkml:UniqueKey ;
-    linkml:definition_uri linkml:UniqueKey ;
-    linkml:mixins linkml:Annotatable,
-        linkml:CommonMetadata,
-        linkml:Extensible ;
-    linkml:slot_usage [ ] ;
-    linkml:slots linkml:alt_descriptions,
-        linkml:annotations,
-        linkml:comments,
-        linkml:deprecated,
-        linkml:deprecated_element_has_exact_replacement,
-        linkml:deprecated_element_has_possible_replacement,
-        linkml:description,
-        linkml:examples,
-        linkml:extensions,
-        linkml:from_schema,
-        linkml:imported_from,
-        linkml:in_subset,
-        linkml:notes,
-        linkml:see_also,
-        linkml:source,
-        linkml:title,
-        linkml:todos,
-        linkml:unique_key_slots .
-
 linkml:boolean_slot a linkml:SlotDefinition ;
     bibo:status linkml:testing ;
     skos:definition "A grouping of slots that expression a boolean operator over a list of operands" ;
@@ -2146,6 +2195,7 @@ linkml:list_value_specification_constant a linkml:SlotDefinition ;
     linkml:slot_uri linkml:list_value_specification_constant .
 
 linkml:range a linkml:SlotDefinition ;
+    skos:altLabel "value domain" ;
     skos:definition """defines the type of the object of the slot.  Given the following slot definition
   S1:
     domain: C1
@@ -2335,7 +2385,40 @@ linkml:Prefix a linkml:ClassDefinition ;
     linkml:slots linkml:prefix_prefix,
         linkml:prefix_reference .
 
+linkml:UniqueKey a linkml:ClassDefinition ;
+    skos:definition "a collection of slots whose values uniquely identify an instance of a class" ;
+    skos:inScheme linkml:meta ;
+    linkml:class_uri linkml:UniqueKey ;
+    linkml:definition_uri linkml:UniqueKey ;
+    linkml:mixins linkml:Annotatable,
+        linkml:CommonMetadata,
+        linkml:Extensible ;
+    linkml:slot_usage [ ] ;
+    linkml:slots linkml:alt_descriptions,
+        linkml:annotations,
+        linkml:comments,
+        linkml:deprecated,
+        linkml:deprecated_element_has_exact_replacement,
+        linkml:deprecated_element_has_possible_replacement,
+        linkml:description,
+        linkml:examples,
+        linkml:extensions,
+        linkml:from_schema,
+        linkml:imported_from,
+        linkml:in_subset,
+        linkml:notes,
+        linkml:see_also,
+        linkml:source,
+        linkml:title,
+        linkml:todos,
+        linkml:unique_key_name,
+        linkml:unique_key_slots .
+
 linkml:aliases a linkml:SlotDefinition ;
+    skos:altLabel "alternate names",
+        "alternative labels",
+        "designations",
+        "synonyms" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation skos:altLabel ;
     linkml:definition_uri linkml:aliases ;
@@ -2394,6 +2477,18 @@ linkml:conforms_to a linkml:SlotDefinition ;
     linkml:range linkml:string ;
     linkml:slot_uri dcterms:conformsTo .
 
+linkml:disjoint_with a linkml:SlotDefinition ;
+    skos:definition "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:disjoint_with ;
+    linkml:domain linkml:Definition ;
+    linkml:domain_of linkml:ClassDefinition,
+        linkml:SlotDefinition ;
+    linkml:multivalued true ;
+    linkml:owner linkml:disjoint_with ;
+    linkml:range linkml:Definition ;
+    linkml:slot_uri linkml:disjoint_with .
+
 linkml:exact_mappings a linkml:SlotDefinition ;
     skos:definition "A list of terms from different schemas or terminology systems that have identical meaning." ;
     skos:inScheme linkml:mappings ;
@@ -2408,6 +2503,7 @@ linkml:exact_mappings a linkml:SlotDefinition ;
     linkml:slot_uri skos:exactMatch .
 
 linkml:maximum_value a linkml:SlotDefinition ;
+    skos:altLabel "high value" ;
     skos:definition "for slots with ranges of type number, the value must be equal to or lowe than this" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:maximum_value ;
@@ -2420,6 +2516,7 @@ linkml:maximum_value a linkml:SlotDefinition ;
     linkml:slot_uri linkml:maximum_value .
 
 linkml:minimum_value a linkml:SlotDefinition ;
+    skos:altLabel "low value" ;
     skos:definition "for slots with ranges of type number, the value must be equal to or higher than this" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:minimum_value ;
@@ -2530,6 +2627,8 @@ linkml:local_names a linkml:SlotDefinition ;
 linkml:name a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
     rdfs:seeAlso <https://en.wikipedia.org/wiki/Data_element_name> ;
+    skos:altLabel "short name",
+        "unique name" ;
     skos:definition "the unique name of the element within the context of the schema.  Name is combined with the default prefix to form the globally unique subject of the target class." ;
     skos:exactMatch schema1:name ;
     skos:inScheme linkml:meta ;
@@ -2810,6 +2909,7 @@ linkml:EnumDefinition a linkml:ClassDefinition ;
         linkml:todos .
 
 linkml:PermissibleValue a linkml:ClassDefinition ;
+    skos:altLabel "PV" ;
     skos:definition "a permissible value, accompanied by intended text and an optional mapping to a concept URI" ;
     skos:inScheme linkml:meta ;
     linkml:class_uri linkml:PermissibleValue ;
@@ -2928,6 +3028,7 @@ linkml:see_also a linkml:SlotDefinition ;
 
 linkml:title a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
+    skos:altLabel "long name" ;
     skos:definition "the official title of the element" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation dcterms:title ;
@@ -2951,6 +3052,7 @@ linkml:types a linkml:SlotDefinition ;
     linkml:slot_uri linkml:types .
 
 linkml:alt_descriptions a linkml:SlotDefinition ;
+    skos:altLabel "alternate definitions" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:alt_descriptions ;
     linkml:domain linkml:Element ;
@@ -2996,6 +3098,8 @@ linkml:imported_from a linkml:SlotDefinition ;
     linkml:slot_uri linkml:imported_from .
 
 linkml:source a linkml:SlotDefinition ;
+    skos:altLabel "derived from",
+        "origin" ;
     skos:closeMatch schema1:isBasedOn,
         prov:wasDerivedFrom ;
     skos:definition "A related resource from which the element is derived." ;
@@ -3022,6 +3126,7 @@ linkml:todos a linkml:SlotDefinition ;
 
 linkml:description a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
+    skos:altLabel "definition" ;
     skos:definition "a description of the element's purpose and use" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation skos:definition ;
@@ -3049,6 +3154,10 @@ linkml:annotations a linkml:SlotDefinition ;
     linkml:slot_uri linkml:annotations .
 
 linkml:mappings a linkml:SlotDefinition ;
+    skos:altLabel "alternate identifiers",
+        "alternate ids",
+        "identifiers",
+        "xrefs" ;
     skos:definition "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." ;
     skos:inScheme linkml:mappings ;
     skos:mappingRelation skos:mappingRelation ;
@@ -3449,7 +3558,9 @@ linkml:ClassDefinition a linkml:ClassDefinition ;
         linkml:annotations,
         linkml:attributes,
         linkml:broad_mappings,
+        linkml:children_are_mutually_disjoint,
         linkml:class_definition_apply_to,
+        linkml:class_definition_disjoint_with,
         linkml:class_definition_is_a,
         linkml:class_definition_mixins,
         linkml:class_definition_rules,
@@ -3555,37 +3666,37 @@ linkml:meta a linkml:SchemaDefinition ;
     linkml:enums linkml:presence_enum,
         linkml:pv_formula_options,
         linkml:relational_role_enum ;
-    linkml:generation_date "2021-12-28T23:39:49"^^xsd:dateTime ;
+    linkml:generation_date "2022-01-22T01:10:15"^^xsd:dateTime ;
     linkml:id linkml:meta ;
     linkml:imports linkml:annotations,
         linkml:extensions,
         linkml:mappings,
         linkml:types ;
     linkml:metamodel_version "1.7.0" ;
-    linkml:prefixes [ linkml:prefix_prefix "linkml" ;
+    linkml:prefixes [ linkml:prefix_prefix "qb" ;
+            linkml:prefix_reference qb: ],
+        [ linkml:prefix_prefix "pav" ;
+            linkml:prefix_reference pav: ],
+        [ linkml:prefix_prefix "swrl" ;
+            linkml:prefix_reference swrl: ],
+        [ linkml:prefix_prefix "schema" ;
+            linkml:prefix_reference schema1: ],
+        [ linkml:prefix_prefix "sh" ;
+            linkml:prefix_reference sh1: ],
+        [ linkml:prefix_prefix "oslc" ;
+            linkml:prefix_reference oslc: ],
+        [ linkml:prefix_prefix "prov" ;
+            linkml:prefix_reference prov: ],
+        [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference linkml: ],
         [ linkml:prefix_prefix "skos" ;
             linkml:prefix_reference skos: ],
-        [ linkml:prefix_prefix "prov" ;
-            linkml:prefix_reference prov: ],
-        [ linkml:prefix_prefix "swrl" ;
-            linkml:prefix_reference swrl: ],
         [ linkml:prefix_prefix "owl" ;
             linkml:prefix_reference owl: ],
-        [ linkml:prefix_prefix "bibo" ;
-            linkml:prefix_reference bibo: ],
         [ linkml:prefix_prefix "OIO" ;
             linkml:prefix_reference OIO: ],
-        [ linkml:prefix_prefix "pav" ;
-            linkml:prefix_reference pav: ],
-        [ linkml:prefix_prefix "qb" ;
-            linkml:prefix_reference qb: ],
-        [ linkml:prefix_prefix "sh" ;
-            linkml:prefix_reference sh1: ],
-        [ linkml:prefix_prefix "oslc" ;
-            linkml:prefix_reference oslc: ],
-        [ linkml:prefix_prefix "schema" ;
-            linkml:prefix_reference schema1: ] ;
+        [ linkml:prefix_prefix "bibo" ;
+            linkml:prefix_reference bibo: ] ;
     linkml:slots linkml:abstract,
         linkml:alias,
         linkml:aliases,
@@ -3603,7 +3714,9 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:bidirectional,
         linkml:boolean_slot,
         linkml:broad_mappings,
+        linkml:children_are_mutually_disjoint,
         linkml:class_definition_apply_to,
+        linkml:class_definition_disjoint_with,
         linkml:class_definition_is_a,
         linkml:class_definition_mixins,
         linkml:class_definition_rules,
@@ -3633,6 +3746,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:deprecated_element_has_possible_replacement,
         linkml:description,
         linkml:designates_type,
+        linkml:disjoint_with,
         linkml:domain,
         linkml:domain_of,
         linkml:elseconditions,
@@ -3693,6 +3807,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:none_of,
         linkml:notes,
         linkml:open_world,
+        linkml:owned_by,
         linkml:owner,
         linkml:path_expression_all_of,
         linkml:path_expression_any_of,
@@ -3731,6 +3846,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:singular_name,
         linkml:slot_conditions,
         linkml:slot_definition_apply_to,
+        linkml:slot_definition_disjoint_with,
         linkml:slot_definition_is_a,
         linkml:slot_definition_mixins,
         linkml:slot_definitions,
@@ -3768,6 +3884,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:typeof,
         linkml:types,
         linkml:union_of,
+        linkml:unique_key_name,
         linkml:unique_key_slots,
         linkml:unique_keys,
         linkml:usage_slot_name,
@@ -3778,8 +3895,8 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:values_from,
         linkml:version ;
     linkml:source_file "meta.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45"^^xsd:dateTime ;
-    linkml:source_file_size 51901 ;
+    linkml:source_file_date "2022-01-22T01:07:33"^^xsd:dateTime ;
+    linkml:source_file_size 53722 ;
     linkml:subsets linkml:owl ;
     linkml:types linkml:boolean,
         linkml:date,
@@ -3819,6 +3936,7 @@ linkml:SlotDefinition a linkml:ClassDefinition ;
         linkml:annotations,
         linkml:asymmetric,
         linkml:broad_mappings,
+        linkml:children_are_mutually_disjoint,
         linkml:close_mappings,
         linkml:comments,
         linkml:conforms_to,
@@ -3886,6 +4004,7 @@ linkml:SlotDefinition a linkml:ClassDefinition ;
         linkml:see_also,
         linkml:singular_name,
         linkml:slot_definition_apply_to,
+        linkml:slot_definition_disjoint_with,
         linkml:slot_definition_is_a,
         linkml:slot_definition_mixins,
         linkml:slot_expression_all_of,
diff --git a/linkml_model/rdf/meta.ttl b/linkml_model/rdf/meta.ttl
index 98dc63e0..e4fafe27 100644
--- a/linkml_model/rdf/meta.ttl
+++ b/linkml_model/rdf/meta.ttl
@@ -116,6 +116,21 @@ linkml:class_definition_apply_to a linkml:SlotDefinition ;
     linkml:slot_uri linkml:apply_to ;
     linkml:usage_slot_name "apply_to" .
 
+linkml:class_definition_disjoint_with a linkml:SlotDefinition ;
+    skos:definition "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances" ;
+    skos:inScheme linkml:meta ;
+    skos:prefLabel "disjoint_with" ;
+    linkml:definition_uri linkml:disjoint_with ;
+    linkml:domain linkml:ClassDefinition ;
+    linkml:domain_of linkml:ClassDefinition ;
+    linkml:is_a linkml:disjoint_with ;
+    linkml:is_usage_slot true ;
+    linkml:multivalued true ;
+    linkml:owner linkml:ClassDefinition ;
+    linkml:range linkml:ClassDefinition ;
+    linkml:slot_uri linkml:disjoint_with ;
+    linkml:usage_slot_name "disjoint_with" .
+
 linkml:class_definition_is_a a linkml:SlotDefinition ;
     skos:definition "specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded" ;
     skos:inScheme linkml:meta ;
@@ -316,6 +331,8 @@ linkml:relational_role_enum skos:definition "enumeration of roles a slot on a re
 linkml:schema_definition_name a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
     rdfs:seeAlso <https://en.wikipedia.org/wiki/Data_element_name> ;
+    skos:altLabel "short name",
+        "unique name" ;
     skos:definition "the unique name of the element within the context of the schema.  Name is combined with the default prefix to form the globally unique subject of the target class." ;
     skos:exactMatch schema1:name ;
     skos:inScheme linkml:meta ;
@@ -348,6 +365,21 @@ linkml:slot_definition_apply_to a linkml:SlotDefinition ;
     linkml:slot_uri linkml:apply_to ;
     linkml:usage_slot_name "apply_to" .
 
+linkml:slot_definition_disjoint_with a linkml:SlotDefinition ;
+    skos:definition "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances" ;
+    skos:inScheme linkml:meta ;
+    skos:prefLabel "disjoint_with" ;
+    linkml:definition_uri linkml:disjoint_with ;
+    linkml:domain linkml:SlotDefinition ;
+    linkml:domain_of linkml:SlotDefinition ;
+    linkml:is_a linkml:disjoint_with ;
+    linkml:is_usage_slot true ;
+    linkml:multivalued true ;
+    linkml:owner linkml:SlotDefinition ;
+    linkml:range linkml:SlotDefinition ;
+    linkml:slot_uri linkml:disjoint_with ;
+    linkml:usage_slot_name "disjoint_with" .
+
 linkml:slot_definition_is_a a linkml:SlotDefinition ;
     skos:definition "specifies single-inheritance between classes or slots. While multiple inheritance is not allowed, mixins can be provided effectively providing the same thing. The semantics are the same when translated to formalisms that allow MI (e.g. RDFS/OWL). When translating to a SI framework (e.g. java classes, python classes) then is a is used. When translating a framework without polymorphism (e.g. json-schema, solr document schema) then is a and mixins are recursively unfolded" ;
     skos:inScheme linkml:meta ;
@@ -595,6 +627,7 @@ linkml:ClassLevelRule a linkml:ClassDefinition ;
     linkml:slot_usage [ ] .
 
 linkml:asymmetric a linkml:SlotDefinition ;
+    skos:closeMatch owl:AsymmetricProperty ;
     skos:definition "If s is antisymmetric, and i.s=v where i is different from v, v.s cannot have value i" ;
     skos:inScheme linkml:meta ;
     skos:note "asymmetry is the combination of antisymmetry and irreflexivity" ;
@@ -716,6 +749,7 @@ linkml:class_expression_none_of a linkml:SlotDefinition ;
     linkml:usage_slot_name "none_of" .
 
 linkml:class_uri a linkml:SlotDefinition ;
+    skos:altLabel "public ID" ;
     skos:definition "URI of the class in an RDF environment" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:class_uri ;
@@ -1051,6 +1085,7 @@ representation and output.""" ;
     linkml:slot_uri linkml:inlined_as_list .
 
 linkml:irreflexive a linkml:SlotDefinition ;
+    skos:closeMatch owl:IrreflexiveProperty ;
     skos:definition "If s is irreflexive, then there exists no i such i.s=i" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:irreflexive ;
@@ -1123,6 +1158,7 @@ linkml:locally_reflexive a linkml:SlotDefinition ;
     linkml:slot_uri linkml:locally_reflexive .
 
 linkml:meaning a linkml:SlotDefinition ;
+    skos:altLabel "PV meaning" ;
     skos:definition "the value meaning (in the 11179 sense) of a permissible value" ;
     skos:editorialNote "we may want to change the range of this (and other) elements in the model to an entitydescription type construct" ;
     skos:inScheme linkml:meta ;
@@ -1165,6 +1201,18 @@ linkml:open_world a linkml:SlotDefinition ;
     linkml:range linkml:boolean ;
     linkml:slot_uri linkml:open_world .
 
+linkml:owned_by a linkml:SlotDefinition ;
+    skos:altLabel "owner",
+        "steward" ;
+    skos:closeMatch rdfs:isDefinedBy ;
+    skos:definition "agent that owns or is the steward of the element" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:owned_by ;
+    linkml:domain linkml:Element ;
+    linkml:owner linkml:owned_by ;
+    linkml:range linkml:uriorcurie ;
+    linkml:slot_uri linkml:owned_by .
+
 linkml:owner a linkml:SlotDefinition ;
     skos:definition "the \"owner\" of the slot. It is the class if it appears in the slots list, otherwise the declaring slot" ;
     skos:inScheme linkml:meta ;
@@ -1273,6 +1321,7 @@ linkml:readonly a linkml:SlotDefinition ;
     linkml:slot_uri linkml:readonly .
 
 linkml:reflexive a linkml:SlotDefinition ;
+    skos:closeMatch owl:ReflexiveProperty ;
     skos:definition "If s is reflexive, then i.s=i for all instances i" ;
     skos:inScheme linkml:meta ;
     skos:note "it is rare for a property to be reflexive, this characteristic is added for completeness, consider instead locally_reflexive" ;
@@ -1446,6 +1495,7 @@ linkml:slot_expression_none_of a linkml:SlotDefinition ;
     linkml:usage_slot_name "none_of" .
 
 linkml:slot_uri a linkml:SlotDefinition ;
+    skos:altLabel "public ID" ;
     skos:definition "predicate of this slot for semantic web application" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:slot_uri ;
@@ -1518,6 +1568,7 @@ linkml:subsets a linkml:SlotDefinition ;
     linkml:slot_uri linkml:subsets .
 
 linkml:symmetric a linkml:SlotDefinition ;
+    skos:closeMatch owl:SymmetricProperty ;
     skos:definition "If s is symmetric, and i.s=v, then v.s=i" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:symmetric ;
@@ -1529,6 +1580,7 @@ linkml:symmetric a linkml:SlotDefinition ;
     linkml:slot_uri linkml:symmetric .
 
 linkml:text a linkml:SlotDefinition ;
+    skos:altLabel "value" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:text ;
     linkml:domain linkml:PermissibleValue ;
@@ -1540,6 +1592,7 @@ linkml:text a linkml:SlotDefinition ;
     linkml:slot_uri linkml:text .
 
 linkml:transitive a linkml:SlotDefinition ;
+    skos:closeMatch owl:TransitiveProperty ;
     skos:definition "If s is transitive, and i.s=z, and s.s=j, then i.s=j" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:transitive ;
@@ -1667,6 +1720,18 @@ linkml:union_of a linkml:SlotDefinition ;
     linkml:range linkml:ClassDefinition ;
     linkml:slot_uri linkml:union_of .
 
+linkml:unique_key_name a linkml:SlotDefinition ;
+    skos:definition "name of the unique key" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:unique_key_name ;
+    linkml:domain linkml:UniqueKey ;
+    linkml:domain_of linkml:UniqueKey ;
+    linkml:key true ;
+    linkml:owner linkml:UniqueKey ;
+    linkml:range linkml:string ;
+    linkml:required true ;
+    linkml:slot_uri linkml:unique_key_name .
+
 linkml:unique_key_slots a linkml:SlotDefinition ;
     skos:definition "list of slot names that form a key" ;
     skos:inScheme linkml:meta ;
@@ -1893,6 +1958,17 @@ all_members:
     linkml:range linkml:SlotDefinition ;
     linkml:slot_uri linkml:all_members .
 
+linkml:children_are_mutually_disjoint a linkml:SlotDefinition ;
+    skos:definition "If true then all direct is_a children are mutually disjoint and share no instances in common" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:children_are_mutually_disjoint ;
+    linkml:domain linkml:Definition ;
+    linkml:domain_of linkml:ClassDefinition,
+        linkml:SlotDefinition ;
+    linkml:owner linkml:children_are_mutually_disjoint ;
+    linkml:range linkml:boolean ;
+    linkml:slot_uri linkml:children_are_mutually_disjoint .
+
 linkml:created_by a linkml:SlotDefinition ;
     skos:definition "agent that created the element" ;
     skos:inScheme linkml:meta ;
@@ -2043,6 +2119,7 @@ linkml:slot_names_unique a linkml:SlotDefinition ;
     linkml:slot_uri linkml:slot_names_unique .
 
 linkml:status a linkml:SlotDefinition ;
+    skos:altLabel "workflow status" ;
     skos:definition "status of the element" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation bibo:status ;
@@ -2097,34 +2174,6 @@ linkml:AnonymousTypeExpression a linkml:ClassDefinition ;
         linkml:type_expression_exactly_one_of,
         linkml:type_expression_none_of .
 
-linkml:UniqueKey a linkml:ClassDefinition ;
-    skos:definition "a collection of slots whose values uniquely identify an instance of a class" ;
-    skos:inScheme linkml:meta ;
-    linkml:class_uri linkml:UniqueKey ;
-    linkml:definition_uri linkml:UniqueKey ;
-    linkml:mixins linkml:Annotatable,
-        linkml:CommonMetadata,
-        linkml:Extensible ;
-    linkml:slot_usage [ ] ;
-    linkml:slots linkml:alt_descriptions,
-        linkml:annotations,
-        linkml:comments,
-        linkml:deprecated,
-        linkml:deprecated_element_has_exact_replacement,
-        linkml:deprecated_element_has_possible_replacement,
-        linkml:description,
-        linkml:examples,
-        linkml:extensions,
-        linkml:from_schema,
-        linkml:imported_from,
-        linkml:in_subset,
-        linkml:notes,
-        linkml:see_also,
-        linkml:source,
-        linkml:title,
-        linkml:todos,
-        linkml:unique_key_slots .
-
 linkml:boolean_slot a linkml:SlotDefinition ;
     bibo:status linkml:testing ;
     skos:definition "A grouping of slots that expression a boolean operator over a list of operands" ;
@@ -2146,6 +2195,7 @@ linkml:list_value_specification_constant a linkml:SlotDefinition ;
     linkml:slot_uri linkml:list_value_specification_constant .
 
 linkml:range a linkml:SlotDefinition ;
+    skos:altLabel "value domain" ;
     skos:definition """defines the type of the object of the slot.  Given the following slot definition
   S1:
     domain: C1
@@ -2335,7 +2385,40 @@ linkml:Prefix a linkml:ClassDefinition ;
     linkml:slots linkml:prefix_prefix,
         linkml:prefix_reference .
 
+linkml:UniqueKey a linkml:ClassDefinition ;
+    skos:definition "a collection of slots whose values uniquely identify an instance of a class" ;
+    skos:inScheme linkml:meta ;
+    linkml:class_uri linkml:UniqueKey ;
+    linkml:definition_uri linkml:UniqueKey ;
+    linkml:mixins linkml:Annotatable,
+        linkml:CommonMetadata,
+        linkml:Extensible ;
+    linkml:slot_usage [ ] ;
+    linkml:slots linkml:alt_descriptions,
+        linkml:annotations,
+        linkml:comments,
+        linkml:deprecated,
+        linkml:deprecated_element_has_exact_replacement,
+        linkml:deprecated_element_has_possible_replacement,
+        linkml:description,
+        linkml:examples,
+        linkml:extensions,
+        linkml:from_schema,
+        linkml:imported_from,
+        linkml:in_subset,
+        linkml:notes,
+        linkml:see_also,
+        linkml:source,
+        linkml:title,
+        linkml:todos,
+        linkml:unique_key_name,
+        linkml:unique_key_slots .
+
 linkml:aliases a linkml:SlotDefinition ;
+    skos:altLabel "alternate names",
+        "alternative labels",
+        "designations",
+        "synonyms" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation skos:altLabel ;
     linkml:definition_uri linkml:aliases ;
@@ -2394,6 +2477,18 @@ linkml:conforms_to a linkml:SlotDefinition ;
     linkml:range linkml:string ;
     linkml:slot_uri dcterms:conformsTo .
 
+linkml:disjoint_with a linkml:SlotDefinition ;
+    skos:definition "Two classes are disjoint if they have no instances in common, two slots are disjoint if they can never hold between the same two instances" ;
+    skos:inScheme linkml:meta ;
+    linkml:definition_uri linkml:disjoint_with ;
+    linkml:domain linkml:Definition ;
+    linkml:domain_of linkml:ClassDefinition,
+        linkml:SlotDefinition ;
+    linkml:multivalued true ;
+    linkml:owner linkml:disjoint_with ;
+    linkml:range linkml:Definition ;
+    linkml:slot_uri linkml:disjoint_with .
+
 linkml:exact_mappings a linkml:SlotDefinition ;
     skos:definition "A list of terms from different schemas or terminology systems that have identical meaning." ;
     skos:inScheme linkml:mappings ;
@@ -2408,6 +2503,7 @@ linkml:exact_mappings a linkml:SlotDefinition ;
     linkml:slot_uri skos:exactMatch .
 
 linkml:maximum_value a linkml:SlotDefinition ;
+    skos:altLabel "high value" ;
     skos:definition "for slots with ranges of type number, the value must be equal to or lowe than this" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:maximum_value ;
@@ -2420,6 +2516,7 @@ linkml:maximum_value a linkml:SlotDefinition ;
     linkml:slot_uri linkml:maximum_value .
 
 linkml:minimum_value a linkml:SlotDefinition ;
+    skos:altLabel "low value" ;
     skos:definition "for slots with ranges of type number, the value must be equal to or higher than this" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:minimum_value ;
@@ -2530,6 +2627,8 @@ linkml:local_names a linkml:SlotDefinition ;
 linkml:name a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
     rdfs:seeAlso <https://en.wikipedia.org/wiki/Data_element_name> ;
+    skos:altLabel "short name",
+        "unique name" ;
     skos:definition "the unique name of the element within the context of the schema.  Name is combined with the default prefix to form the globally unique subject of the target class." ;
     skos:exactMatch schema1:name ;
     skos:inScheme linkml:meta ;
@@ -2810,6 +2909,7 @@ linkml:EnumDefinition a linkml:ClassDefinition ;
         linkml:todos .
 
 linkml:PermissibleValue a linkml:ClassDefinition ;
+    skos:altLabel "PV" ;
     skos:definition "a permissible value, accompanied by intended text and an optional mapping to a concept URI" ;
     skos:inScheme linkml:meta ;
     linkml:class_uri linkml:PermissibleValue ;
@@ -2928,6 +3028,7 @@ linkml:see_also a linkml:SlotDefinition ;
 
 linkml:title a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
+    skos:altLabel "long name" ;
     skos:definition "the official title of the element" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation dcterms:title ;
@@ -2951,6 +3052,7 @@ linkml:types a linkml:SlotDefinition ;
     linkml:slot_uri linkml:types .
 
 linkml:alt_descriptions a linkml:SlotDefinition ;
+    skos:altLabel "alternate definitions" ;
     skos:inScheme linkml:meta ;
     linkml:definition_uri linkml:alt_descriptions ;
     linkml:domain linkml:Element ;
@@ -2996,6 +3098,8 @@ linkml:imported_from a linkml:SlotDefinition ;
     linkml:slot_uri linkml:imported_from .
 
 linkml:source a linkml:SlotDefinition ;
+    skos:altLabel "derived from",
+        "origin" ;
     skos:closeMatch schema1:isBasedOn,
         prov:wasDerivedFrom ;
     skos:definition "A related resource from which the element is derived." ;
@@ -3022,6 +3126,7 @@ linkml:todos a linkml:SlotDefinition ;
 
 linkml:description a linkml:SlotDefinition ;
     OIO:inSubset linkml:owl ;
+    skos:altLabel "definition" ;
     skos:definition "a description of the element's purpose and use" ;
     skos:inScheme linkml:meta ;
     skos:mappingRelation skos:definition ;
@@ -3049,6 +3154,10 @@ linkml:annotations a linkml:SlotDefinition ;
     linkml:slot_uri linkml:annotations .
 
 linkml:mappings a linkml:SlotDefinition ;
+    skos:altLabel "alternate identifiers",
+        "alternate ids",
+        "identifiers",
+        "xrefs" ;
     skos:definition "A list of terms from different schemas or terminology systems that have comparable meaning. These may include terms that are precisely equivalent, broader or narrower in meaning, or otherwise semantically related but not equivalent from a strict ontological perspective." ;
     skos:inScheme linkml:mappings ;
     skos:mappingRelation skos:mappingRelation ;
@@ -3449,7 +3558,9 @@ linkml:ClassDefinition a linkml:ClassDefinition ;
         linkml:annotations,
         linkml:attributes,
         linkml:broad_mappings,
+        linkml:children_are_mutually_disjoint,
         linkml:class_definition_apply_to,
+        linkml:class_definition_disjoint_with,
         linkml:class_definition_is_a,
         linkml:class_definition_mixins,
         linkml:class_definition_rules,
@@ -3555,37 +3666,37 @@ linkml:meta a linkml:SchemaDefinition ;
     linkml:enums linkml:presence_enum,
         linkml:pv_formula_options,
         linkml:relational_role_enum ;
-    linkml:generation_date "2021-12-28T23:39:35"^^xsd:dateTime ;
+    linkml:generation_date "2022-01-22T01:10:01"^^xsd:dateTime ;
     linkml:id linkml:meta ;
     linkml:imports linkml:annotations,
         linkml:extensions,
         linkml:mappings,
         linkml:types ;
     linkml:metamodel_version "1.7.0" ;
-    linkml:prefixes [ linkml:prefix_prefix "bibo" ;
-            linkml:prefix_reference bibo: ],
+    linkml:prefixes [ linkml:prefix_prefix "swrl" ;
+            linkml:prefix_reference swrl: ],
+        [ linkml:prefix_prefix "owl" ;
+            linkml:prefix_reference owl: ],
+        [ linkml:prefix_prefix "sh" ;
+            linkml:prefix_reference sh1: ],
+        [ linkml:prefix_prefix "schema" ;
+            linkml:prefix_reference schema1: ],
+        [ linkml:prefix_prefix "skos" ;
+            linkml:prefix_reference skos: ],
+        [ linkml:prefix_prefix "prov" ;
+            linkml:prefix_reference prov: ],
+        [ linkml:prefix_prefix "OIO" ;
+            linkml:prefix_reference OIO: ],
         [ linkml:prefix_prefix "qb" ;
             linkml:prefix_reference qb: ],
         [ linkml:prefix_prefix "oslc" ;
             linkml:prefix_reference oslc: ],
-        [ linkml:prefix_prefix "prov" ;
-            linkml:prefix_reference prov: ],
-        [ linkml:prefix_prefix "swrl" ;
-            linkml:prefix_reference swrl: ],
-        [ linkml:prefix_prefix "skos" ;
-            linkml:prefix_reference skos: ],
-        [ linkml:prefix_prefix "schema" ;
-            linkml:prefix_reference schema1: ],
         [ linkml:prefix_prefix "pav" ;
             linkml:prefix_reference pav: ],
-        [ linkml:prefix_prefix "sh" ;
-            linkml:prefix_reference sh1: ],
         [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference linkml: ],
-        [ linkml:prefix_prefix "OIO" ;
-            linkml:prefix_reference OIO: ],
-        [ linkml:prefix_prefix "owl" ;
-            linkml:prefix_reference owl: ] ;
+        [ linkml:prefix_prefix "bibo" ;
+            linkml:prefix_reference bibo: ] ;
     linkml:slots linkml:abstract,
         linkml:alias,
         linkml:aliases,
@@ -3603,7 +3714,9 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:bidirectional,
         linkml:boolean_slot,
         linkml:broad_mappings,
+        linkml:children_are_mutually_disjoint,
         linkml:class_definition_apply_to,
+        linkml:class_definition_disjoint_with,
         linkml:class_definition_is_a,
         linkml:class_definition_mixins,
         linkml:class_definition_rules,
@@ -3633,6 +3746,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:deprecated_element_has_possible_replacement,
         linkml:description,
         linkml:designates_type,
+        linkml:disjoint_with,
         linkml:domain,
         linkml:domain_of,
         linkml:elseconditions,
@@ -3693,6 +3807,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:none_of,
         linkml:notes,
         linkml:open_world,
+        linkml:owned_by,
         linkml:owner,
         linkml:path_expression_all_of,
         linkml:path_expression_any_of,
@@ -3731,6 +3846,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:singular_name,
         linkml:slot_conditions,
         linkml:slot_definition_apply_to,
+        linkml:slot_definition_disjoint_with,
         linkml:slot_definition_is_a,
         linkml:slot_definition_mixins,
         linkml:slot_definitions,
@@ -3768,6 +3884,7 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:typeof,
         linkml:types,
         linkml:union_of,
+        linkml:unique_key_name,
         linkml:unique_key_slots,
         linkml:unique_keys,
         linkml:usage_slot_name,
@@ -3778,8 +3895,8 @@ linkml:meta a linkml:SchemaDefinition ;
         linkml:values_from,
         linkml:version ;
     linkml:source_file "meta.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45"^^xsd:dateTime ;
-    linkml:source_file_size 51901 ;
+    linkml:source_file_date "2022-01-22T01:07:33"^^xsd:dateTime ;
+    linkml:source_file_size 53722 ;
     linkml:subsets linkml:owl ;
     linkml:types linkml:boolean,
         linkml:date,
@@ -3819,6 +3936,7 @@ linkml:SlotDefinition a linkml:ClassDefinition ;
         linkml:annotations,
         linkml:asymmetric,
         linkml:broad_mappings,
+        linkml:children_are_mutually_disjoint,
         linkml:close_mappings,
         linkml:comments,
         linkml:conforms_to,
@@ -3886,6 +4004,7 @@ linkml:SlotDefinition a linkml:ClassDefinition ;
         linkml:see_also,
         linkml:singular_name,
         linkml:slot_definition_apply_to,
+        linkml:slot_definition_disjoint_with,
         linkml:slot_definition_is_a,
         linkml:slot_definition_mixins,
         linkml:slot_expression_all_of,
diff --git a/linkml_model/rdf/types.model.ttl b/linkml_model/rdf/types.model.ttl
index 38c235fa..213e838a 100644
--- a/linkml_model/rdf/types.model.ttl
+++ b/linkml_model/rdf/types.model.ttl
@@ -6,7 +6,7 @@
     linkml:default_prefix "linkml" ;
     linkml:default_range "string" ;
     linkml:description "Shared type definitions for the core LinkML mode and metamodel" ;
-    linkml:generation_date "2021-12-28T23:39:40" ;
+    linkml:generation_date "2022-01-22T01:10:22" ;
     linkml:id "https://w3id.org/linkml/types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     linkml:metamodel_version "1.7.0" ;
@@ -18,17 +18,16 @@
         [ linkml:prefix_prefix "shex" ;
             linkml:prefix_reference "http://www.w3.org/ns/shex#" ] ;
     linkml:source_file "types.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 2676 ;
     linkml:title "Core LinkML metamodel types" ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "uriorcurie" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
             linkml:base "ElementIdentifier" ;
             linkml:comments "Used for inheritence and type checking" ;
@@ -39,28 +38,21 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/ns/shex#iri" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "datetime" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:description "A real number that conforms to the xsd:double specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "nodeidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
             linkml:base "str" ;
             linkml:definition_uri "https://w3id.org/linkml/String" ;
@@ -68,6 +60,22 @@
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:name "string" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
+            linkml:description "An integer" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:name "date" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
             linkml:base "NCName" ;
             linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
@@ -77,60 +85,52 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+            linkml:name "datetime" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "uri" ;
+            linkml:name "uriorcurie" ;
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:description "A real number that conforms to the xsd:double specification" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "uri" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:description "An integer" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
-            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ] ;
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ] ;
     linkml:version "2.0.0" .
 
 
diff --git a/linkml_model/rdf/types.ttl b/linkml_model/rdf/types.ttl
index d9c85a0f..72d99bed 100644
--- a/linkml_model/rdf/types.ttl
+++ b/linkml_model/rdf/types.ttl
@@ -6,34 +6,28 @@
     linkml:default_prefix "linkml" ;
     linkml:default_range "string" ;
     linkml:description "Shared type definitions for the core LinkML mode and metamodel" ;
-    linkml:generation_date "2021-12-28T23:39:25" ;
+    linkml:generation_date "2022-01-22T01:10:08" ;
     linkml:id "https://w3id.org/linkml/types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:name "types" ;
     linkml:prefixes [ linkml:prefix_prefix "xsd" ;
             linkml:prefix_reference "http://www.w3.org/2001/XMLSchema#" ],
-        [ linkml:prefix_prefix "linkml" ;
-            linkml:prefix_reference "https://w3id.org/linkml/" ],
         [ linkml:prefix_prefix "shex" ;
-            linkml:prefix_reference "http://www.w3.org/ns/shex#" ] ;
+            linkml:prefix_reference "http://www.w3.org/ns/shex#" ],
+        [ linkml:prefix_prefix "linkml" ;
+            linkml:prefix_reference "https://w3id.org/linkml/" ] ;
     linkml:source_file "types.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 2676 ;
     linkml:title "Core LinkML metamodel types" ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
+            linkml:base "NCName" ;
+            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
+            linkml:description "Prefix part of CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "string" ;
+            linkml:name "ncname" ;
+            linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
             linkml:base "XSDTime" ;
@@ -45,13 +39,13 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "datetime" ;
+            linkml:name "nodeidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
             linkml:base "int" ;
             linkml:definition_uri "https://w3id.org/linkml/Integer" ;
@@ -78,29 +72,34 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "nodeidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "uriorcurie" ;
+            linkml:name "datetime" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
             linkml:base "URI" ;
             linkml:definition_uri "https://w3id.org/linkml/Uri" ;
@@ -110,20 +109,21 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NCName" ;
-            linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
-            linkml:description "Prefix part of CURIE" ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "ncname" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+            linkml:name "uriorcurie" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
             linkml:definition_uri "https://w3id.org/linkml/Double" ;
diff --git a/linkml_model/rdf/validation.model.ttl b/linkml_model/rdf/validation.model.ttl
index e7788ac4..58c55eee 100644
--- a/linkml_model/rdf/validation.model.ttl
+++ b/linkml_model/rdf/validation.model.ttl
@@ -4,6 +4,20 @@
 
 [] a linkml:SchemaDefinition ;
     linkml:classes [ a linkml:ClassDefinition ;
+            linkml:attributes [ a linkml:SlotDefinition ;
+                    linkml:multivalued true ;
+                    linkml:name "results" ;
+                    linkml:range "ValidationResult" ] ;
+            linkml:class_uri "https://w3id.org/shacl/ValidationReport" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportValidationReport" ;
+            linkml:description "A report object" ;
+            linkml:from_schema "https://w3id.org/linkml/reporting" ;
+            linkml:mappings "sh:ValidationReport" ;
+            linkml:name "ValidationReport" ;
+            linkml:slot_usage [ ] ;
+            linkml:slots "validationReport__results" ;
+            linkml:todos "add prov object" ],
+        [ a linkml:ClassDefinition ;
             linkml:class_uri "https://w3id.org/shacl/ValidationResult" ;
             linkml:definition_uri "https://w3id.org/linkml/reportValidationResult" ;
             linkml:description "An individual result arising from validation of a data instance using a particular rule" ;
@@ -19,21 +33,7 @@
                 "severity",
                 "source",
                 "subject",
-                "type" ],
-        [ a linkml:ClassDefinition ;
-            linkml:attributes [ a linkml:SlotDefinition ;
-                    linkml:multivalued true ;
-                    linkml:name "results" ;
-                    linkml:range "ValidationResult" ] ;
-            linkml:class_uri "https://w3id.org/shacl/ValidationReport" ;
-            linkml:definition_uri "https://w3id.org/linkml/reportValidationReport" ;
-            linkml:description "A report object" ;
-            linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:mappings "sh:ValidationReport" ;
-            linkml:name "ValidationReport" ;
-            linkml:slot_usage [ ] ;
-            linkml:slots "validationReport__results" ;
-            linkml:todos "add prov object" ] ;
+                "type" ] ;
     linkml:default_curi_maps "semweb_context" ;
     linkml:default_prefix "reporting" ;
     linkml:default_range "string" ;
@@ -43,33 +43,33 @@
         "rdf",
         "rdfs",
         "xsd" ;
-    linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportProblemType" ;
+    linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportSeverityOptions" ;
+            linkml:exact_mappings "sh:Severity" ;
+            linkml:from_schema "https://w3id.org/linkml/reporting" ;
+            linkml:name "severity_options" ;
+            linkml:permissible_values [ linkml:text "FATAL" ],
+                [ linkml:meaning "sh:Violation" ;
+                    linkml:text "ERROR" ],
+                [ linkml:meaning "sh:Info" ;
+                    linkml:text "INFO" ],
+                [ linkml:meaning "sh:Warning" ;
+                    linkml:text "WARNING" ] ],
+        [ linkml:definition_uri "https://w3id.org/linkml/reportProblemType" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
             linkml:name "problem_type" ;
             linkml:permissible_values [ linkml:description "Applies when the value of a slot is inconsistent with the declared range" ;
                     linkml:text "slot_range_violation" ],
-                [ linkml:description "Applies when a slot is used in an instance of a class where the slot is not applicable for that class" ;
-                    linkml:text "inapplicable_slot" ],
-                [ linkml:description "Applies when a slot is used in data but the slot is undeclared in the datamodel" ;
-                    linkml:text "undeclared_slot" ],
                 [ linkml:description "Applies when an instance of a class has a required slot which is not filled in" ;
                     linkml:text "missing_slot_value" ],
                 [ linkml:description "The data could not be parsed" ;
                     linkml:text "parsing_error" ],
                 [ linkml:meaning "sh:MaxCountConstraintComponent" ;
-                    linkml:text "max_count_violation" ] ],
-        [ linkml:definition_uri "https://w3id.org/linkml/reportSeverityOptions" ;
-            linkml:exact_mappings "sh:Severity" ;
-            linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "severity_options" ;
-            linkml:permissible_values [ linkml:text "FATAL" ],
-                [ linkml:meaning "sh:Violation" ;
-                    linkml:text "ERROR" ],
-                [ linkml:meaning "sh:Warning" ;
-                    linkml:text "WARNING" ],
-                [ linkml:meaning "sh:Info" ;
-                    linkml:text "INFO" ] ] ;
-    linkml:generation_date "2021-12-28T23:39:52" ;
+                    linkml:text "max_count_violation" ],
+                [ linkml:description "Applies when a slot is used in an instance of a class where the slot is not applicable for that class" ;
+                    linkml:text "inapplicable_slot" ],
+                [ linkml:description "Applies when a slot is used in data but the slot is undeclared in the datamodel" ;
+                    linkml:text "undeclared_slot" ] ] ;
+    linkml:generation_date "2022-01-22T01:10:09" ;
     linkml:id "https://w3id.org/linkml/reporting" ;
     linkml:imports "linkml:types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
@@ -81,37 +81,30 @@
             linkml:prefix_reference "https://w3id.org/linkml/report" ],
         [ linkml:prefix_prefix "sh" ;
             linkml:prefix_reference "https://w3id.org/shacl/" ],
-        [ linkml:prefix_prefix "linkml" ;
-            linkml:prefix_reference "https://w3id.org/linkml/" ],
         [ linkml:prefix_prefix "pav" ;
             linkml:prefix_reference "http://purl.org/pav/" ],
+        [ linkml:prefix_prefix "linkml" ;
+            linkml:prefix_reference "https://w3id.org/linkml/" ],
         [ linkml:prefix_prefix "skos" ;
             linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ] ;
     linkml:slots [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reporttype" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportsubject" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:mappings "https://w3id.org/shacl/sourceConstraintComponent" ;
-            linkml:name "type" ;
+            linkml:mappings "https://w3id.org/shacl/focusNode" ;
+            linkml:name "subject" ;
             linkml:owner "ValidationResult" ;
             linkml:range "nodeidentifier" ;
-            linkml:slot_uri "https://w3id.org/shacl/sourceConstraintComponent" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportseverity" ;
-            linkml:domain_of "ValidationResult" ;
-            linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "severity" ;
-            linkml:owner "ValidationResult" ;
-            linkml:range "severity_options" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportseverity" ],
+            linkml:slot_uri "https://w3id.org/shacl/focusNode" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportinfo" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportpredicate" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "info" ;
+            linkml:name "predicate" ;
             linkml:owner "ValidationResult" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportinfo" ],
+            linkml:range "nodeidentifier" ;
+            linkml:related_mappings "https://w3id.org/shacl/resultPath" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportpredicate" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportsource" ;
             linkml:domain_of "ValidationResult" ;
@@ -140,23 +133,31 @@
             linkml:range "ValidationResult" ;
             linkml:slot_uri "https://w3id.org/linkml/reportresults" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportsubject" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportobject" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:mappings "https://w3id.org/shacl/focusNode" ;
-            linkml:name "subject" ;
+            linkml:mappings "https://w3id.org/shacl/value" ;
+            linkml:name "object" ;
             linkml:owner "ValidationResult" ;
             linkml:range "nodeidentifier" ;
-            linkml:slot_uri "https://w3id.org/shacl/focusNode" ],
+            linkml:slot_uri "https://w3id.org/shacl/value" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportobject" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportseverity" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:mappings "https://w3id.org/shacl/value" ;
-            linkml:name "object" ;
+            linkml:name "severity" ;
+            linkml:owner "ValidationResult" ;
+            linkml:range "severity_options" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportseverity" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reporttype" ;
+            linkml:domain_of "ValidationResult" ;
+            linkml:from_schema "https://w3id.org/linkml/reporting" ;
+            linkml:mappings "https://w3id.org/shacl/sourceConstraintComponent" ;
+            linkml:name "type" ;
             linkml:owner "ValidationResult" ;
             linkml:range "nodeidentifier" ;
-            linkml:slot_uri "https://w3id.org/shacl/value" ],
+            linkml:slot_uri "https://w3id.org/shacl/sourceConstraintComponent" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportobject_str" ;
             linkml:domain_of "ValidationResult" ;
@@ -166,19 +167,57 @@
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportobject_str" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportpredicate" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportinfo" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "predicate" ;
+            linkml:name "info" ;
             linkml:owner "ValidationResult" ;
-            linkml:range "nodeidentifier" ;
-            linkml:related_mappings "https://w3id.org/shacl/resultPath" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportpredicate" ] ;
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportinfo" ] ;
     linkml:source_file "validation.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 2927 ;
     linkml:title "LinkML Report Metamodel" ;
     linkml:types [ a linkml:TypeDefinition ;
+            linkml:base "ElementIdentifier" ;
+            linkml:comments "Used for inheritence and type checking" ;
+            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
+            linkml:description "A URI or CURIE that represents an object in the model." ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "objectidentifier" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/ns/shex#iri" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "date" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+        [ a linkml:TypeDefinition ;
             linkml:base "XSDDateTime" ;
             linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
             linkml:description "The combination of a date and time" ;
@@ -188,13 +227,14 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Decimal" ;
-            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
-            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "decimal" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
+            linkml:name "nodeidentifier" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
             linkml:definition_uri "https://w3id.org/linkml/Float" ;
@@ -204,30 +244,29 @@
             linkml:name "float" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
+            linkml:description "An integer" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "string" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
+            linkml:base "Decimal" ;
+            linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
+            linkml:description "A real number with arbitrary precision that conforms to the xsd:decimal specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+            linkml:name "decimal" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:description "An integer" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:description "A real number that conforms to the xsd:double specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
             linkml:base "NCName" ;
             linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
@@ -238,43 +277,22 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "nodeidentifier" ;
+            linkml:name "uriorcurie" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
-            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
             linkml:base "URI" ;
             linkml:definition_uri "https://w3id.org/linkml/Uri" ;
@@ -283,25 +301,7 @@
             linkml:imported_from "linkml:types" ;
             linkml:name "uri" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:description "A real number that conforms to the xsd:double specification" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "ElementIdentifier" ;
-            linkml:comments "Used for inheritence and type checking" ;
-            linkml:definition_uri "https://w3id.org/linkml/Objectidentifier" ;
-            linkml:description "A URI or CURIE that represents an object in the model." ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "objectidentifier" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#iri" ] .
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ] .
 
 
 
diff --git a/linkml_model/rdf/validation.ttl b/linkml_model/rdf/validation.ttl
index 5e0d3f75..493975a9 100644
--- a/linkml_model/rdf/validation.ttl
+++ b/linkml_model/rdf/validation.ttl
@@ -43,58 +43,69 @@
         "rdf",
         "rdfs",
         "xsd" ;
-    linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportProblemType" ;
+    linkml:enums [ linkml:definition_uri "https://w3id.org/linkml/reportSeverityOptions" ;
+            linkml:exact_mappings "sh:Severity" ;
+            linkml:from_schema "https://w3id.org/linkml/reporting" ;
+            linkml:name "severity_options" ;
+            linkml:permissible_values [ linkml:text "FATAL" ],
+                [ linkml:meaning "sh:Warning" ;
+                    linkml:text "WARNING" ],
+                [ linkml:meaning "sh:Violation" ;
+                    linkml:text "ERROR" ],
+                [ linkml:meaning "sh:Info" ;
+                    linkml:text "INFO" ] ],
+        [ linkml:definition_uri "https://w3id.org/linkml/reportProblemType" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
             linkml:name "problem_type" ;
-            linkml:permissible_values [ linkml:description "Applies when an instance of a class has a required slot which is not filled in" ;
+            linkml:permissible_values [ linkml:description "Applies when a slot is used in an instance of a class where the slot is not applicable for that class" ;
+                    linkml:text "inapplicable_slot" ],
+                [ linkml:description "Applies when an instance of a class has a required slot which is not filled in" ;
                     linkml:text "missing_slot_value" ],
-                [ linkml:meaning "sh:MaxCountConstraintComponent" ;
-                    linkml:text "max_count_violation" ],
                 [ linkml:description "Applies when the value of a slot is inconsistent with the declared range" ;
                     linkml:text "slot_range_violation" ],
                 [ linkml:description "Applies when a slot is used in data but the slot is undeclared in the datamodel" ;
                     linkml:text "undeclared_slot" ],
                 [ linkml:description "The data could not be parsed" ;
                     linkml:text "parsing_error" ],
-                [ linkml:description "Applies when a slot is used in an instance of a class where the slot is not applicable for that class" ;
-                    linkml:text "inapplicable_slot" ] ],
-        [ linkml:definition_uri "https://w3id.org/linkml/reportSeverityOptions" ;
-            linkml:exact_mappings "sh:Severity" ;
-            linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "severity_options" ;
-            linkml:permissible_values [ linkml:meaning "sh:Violation" ;
-                    linkml:text "ERROR" ],
-                [ linkml:text "FATAL" ],
-                [ linkml:meaning "sh:Warning" ;
-                    linkml:text "WARNING" ],
-                [ linkml:meaning "sh:Info" ;
-                    linkml:text "INFO" ] ] ;
-    linkml:generation_date "2021-12-28T23:39:38" ;
+                [ linkml:meaning "sh:MaxCountConstraintComponent" ;
+                    linkml:text "max_count_violation" ] ] ;
+    linkml:generation_date "2022-01-22T01:09:55" ;
     linkml:id "https://w3id.org/linkml/reporting" ;
     linkml:imports "linkml:types" ;
     linkml:license "https://creativecommons.org/publicdomain/zero/1.0/" ;
     linkml:metamodel_version "1.7.0" ;
     linkml:name "reporting" ;
-    linkml:prefixes [ linkml:prefix_prefix "pav" ;
-            linkml:prefix_reference "http://purl.org/pav/" ],
-        [ linkml:prefix_prefix "schema" ;
-            linkml:prefix_reference "http://schema.org/" ],
-        [ linkml:prefix_prefix "reporting" ;
+    linkml:prefixes [ linkml:prefix_prefix "reporting" ;
             linkml:prefix_reference "https://w3id.org/linkml/report" ],
+        [ linkml:prefix_prefix "pav" ;
+            linkml:prefix_reference "http://purl.org/pav/" ],
         [ linkml:prefix_prefix "linkml" ;
             linkml:prefix_reference "https://w3id.org/linkml/" ],
-        [ linkml:prefix_prefix "sh" ;
-            linkml:prefix_reference "https://w3id.org/shacl/" ],
+        [ linkml:prefix_prefix "schema" ;
+            linkml:prefix_reference "http://schema.org/" ],
         [ linkml:prefix_prefix "skos" ;
-            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ] ;
+            linkml:prefix_reference "http://www.w3.org/2004/02/skos/core#" ],
+        [ linkml:prefix_prefix "sh" ;
+            linkml:prefix_reference "https://w3id.org/shacl/" ] ;
     linkml:slots [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportsource" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportpredicate" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "source" ;
+            linkml:name "predicate" ;
             linkml:owner "ValidationResult" ;
             linkml:range "nodeidentifier" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportsource" ],
+            linkml:related_mappings "https://w3id.org/shacl/resultPath" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportpredicate" ],
+        [ a linkml:SlotDefinition ;
+            linkml:alias "results" ;
+            linkml:domain_of "ValidationReport" ;
+            linkml:from_schema "https://w3id.org/linkml/reporting" ;
+            linkml:inlined true ;
+            linkml:multivalued true ;
+            linkml:name "validationReport__results" ;
+            linkml:owner "ValidationReport" ;
+            linkml:range "ValidationResult" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportresults" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportsubject" ;
             linkml:domain_of "ValidationResult" ;
@@ -105,39 +116,22 @@
             linkml:range "nodeidentifier" ;
             linkml:slot_uri "https://w3id.org/shacl/focusNode" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportinstantiates" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportsource" ;
             linkml:domain_of "ValidationResult" ;
-            linkml:exact_mappings "https://w3id.org/shacl/sourceShape" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "instantiates" ;
+            linkml:name "source" ;
             linkml:owner "ValidationResult" ;
             linkml:range "nodeidentifier" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportinstantiates" ],
+            linkml:slot_uri "https://w3id.org/linkml/reportsource" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportpredicate" ;
+            linkml:definition_uri "https://w3id.org/linkml/reporttype" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "predicate" ;
+            linkml:mappings "https://w3id.org/shacl/sourceConstraintComponent" ;
+            linkml:name "type" ;
             linkml:owner "ValidationResult" ;
             linkml:range "nodeidentifier" ;
-            linkml:related_mappings "https://w3id.org/shacl/resultPath" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportpredicate" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportinfo" ;
-            linkml:domain_of "ValidationResult" ;
-            linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "info" ;
-            linkml:owner "ValidationResult" ;
-            linkml:range "string" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportinfo" ],
-        [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reportseverity" ;
-            linkml:domain_of "ValidationResult" ;
-            linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:name "severity" ;
-            linkml:owner "ValidationResult" ;
-            linkml:range "severity_options" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportseverity" ],
+            linkml:slot_uri "https://w3id.org/shacl/sourceConstraintComponent" ],
         [ a linkml:SlotDefinition ;
             linkml:definition_uri "https://w3id.org/linkml/reportobject" ;
             linkml:domain_of "ValidationResult" ;
@@ -156,46 +150,68 @@
             linkml:range "string" ;
             linkml:slot_uri "https://w3id.org/linkml/reportobject_str" ],
         [ a linkml:SlotDefinition ;
-            linkml:definition_uri "https://w3id.org/linkml/reporttype" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportinfo" ;
             linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:mappings "https://w3id.org/shacl/sourceConstraintComponent" ;
-            linkml:name "type" ;
+            linkml:name "info" ;
             linkml:owner "ValidationResult" ;
-            linkml:range "nodeidentifier" ;
-            linkml:slot_uri "https://w3id.org/shacl/sourceConstraintComponent" ],
+            linkml:range "string" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportinfo" ],
         [ a linkml:SlotDefinition ;
-            linkml:alias "results" ;
-            linkml:domain_of "ValidationReport" ;
+            linkml:definition_uri "https://w3id.org/linkml/reportseverity" ;
+            linkml:domain_of "ValidationResult" ;
             linkml:from_schema "https://w3id.org/linkml/reporting" ;
-            linkml:inlined true ;
-            linkml:multivalued true ;
-            linkml:name "validationReport__results" ;
-            linkml:owner "ValidationReport" ;
-            linkml:range "ValidationResult" ;
-            linkml:slot_uri "https://w3id.org/linkml/reportresults" ] ;
+            linkml:name "severity" ;
+            linkml:owner "ValidationResult" ;
+            linkml:range "severity_options" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportseverity" ],
+        [ a linkml:SlotDefinition ;
+            linkml:definition_uri "https://w3id.org/linkml/reportinstantiates" ;
+            linkml:domain_of "ValidationResult" ;
+            linkml:exact_mappings "https://w3id.org/shacl/sourceShape" ;
+            linkml:from_schema "https://w3id.org/linkml/reporting" ;
+            linkml:name "instantiates" ;
+            linkml:owner "ValidationResult" ;
+            linkml:range "nodeidentifier" ;
+            linkml:slot_uri "https://w3id.org/linkml/reportinstantiates" ] ;
     linkml:source_file "validation.yaml" ;
-    linkml:source_file_date "2021-12-28T23:36:45" ;
+    linkml:source_file_date "2022-01-22T01:07:33" ;
     linkml:source_file_size 2927 ;
     linkml:title "LinkML Report Metamodel" ;
     linkml:types [ a linkml:TypeDefinition ;
-            linkml:base "XSDDate" ;
-            linkml:definition_uri "https://w3id.org/linkml/Date" ;
-            linkml:description "a date (year, month and day) in an idealized calendar" ;
+            linkml:base "URI" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
+            linkml:description "a complete URI" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "date" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:name "uri" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "str" ;
+            linkml:definition_uri "https://w3id.org/linkml/String" ;
+            linkml:description "A character string" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "string" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
             linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Double" ;
-            linkml:description "A real number that conforms to the xsd:double specification" ;
+            linkml:definition_uri "https://w3id.org/linkml/Float" ;
+            linkml:description "A real number that conforms to the xsd:float specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "double" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
+            linkml:name "float" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "Bool" ;
+            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
+            linkml:description "A binary (true or false) value" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "boolean" ;
+            linkml:repr "bool" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
         [ a linkml:TypeDefinition ;
             linkml:base "NCName" ;
             linkml:definition_uri "https://w3id.org/linkml/Ncname" ;
@@ -206,22 +222,33 @@
             linkml:repr "str" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "NodeIdentifier" ;
-            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
-            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
+            linkml:base "XSDTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Time" ;
+            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "nodeidentifier" ;
+            linkml:name "time" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "int" ;
-            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
-            linkml:description "An integer" ;
+            linkml:base "XSDDateTime" ;
+            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
+            linkml:description "The combination of a date and time" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "integer" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
+            linkml:name "datetime" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+        [ a linkml:TypeDefinition ;
+            linkml:base "URIorCURIE" ;
+            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
+            linkml:description "a URI or a CURIE" ;
+            linkml:from_schema "https://w3id.org/linkml/types" ;
+            linkml:imported_from "linkml:types" ;
+            linkml:name "uriorcurie" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
         [ a linkml:TypeDefinition ;
             linkml:base "Decimal" ;
             linkml:definition_uri "https://w3id.org/linkml/Decimal" ;
@@ -231,39 +258,40 @@
             linkml:name "decimal" ;
             linkml:uri "http://www.w3.org/2001/XMLSchema#decimal" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "float" ;
-            linkml:definition_uri "https://w3id.org/linkml/Float" ;
-            linkml:description "A real number that conforms to the xsd:float specification" ;
+            linkml:base "NodeIdentifier" ;
+            linkml:definition_uri "https://w3id.org/linkml/Nodeidentifier" ;
+            linkml:description "A URI, CURIE or BNODE that represents a node in a model." ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "float" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#float" ],
+            linkml:name "nodeidentifier" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/ns/shex#nonLiteral" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "XSDDateTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Datetime" ;
-            linkml:description "The combination of a date and time" ;
+            linkml:base "int" ;
+            linkml:definition_uri "https://w3id.org/linkml/Integer" ;
+            linkml:description "An integer" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "datetime" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
+            linkml:name "integer" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#integer" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "Bool" ;
-            linkml:definition_uri "https://w3id.org/linkml/Boolean" ;
-            linkml:description "A binary (true or false) value" ;
+            linkml:base "float" ;
+            linkml:definition_uri "https://w3id.org/linkml/Double" ;
+            linkml:description "A real number that conforms to the xsd:double specification" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "boolean" ;
-            linkml:repr "bool" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#boolean" ],
+            linkml:name "double" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#double" ],
         [ a linkml:TypeDefinition ;
-            linkml:base "str" ;
-            linkml:definition_uri "https://w3id.org/linkml/String" ;
-            linkml:description "A character string" ;
+            linkml:base "XSDDate" ;
+            linkml:definition_uri "https://w3id.org/linkml/Date" ;
+            linkml:description "a date (year, month and day) in an idealized calendar" ;
             linkml:from_schema "https://w3id.org/linkml/types" ;
             linkml:imported_from "linkml:types" ;
-            linkml:name "string" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#string" ],
+            linkml:name "date" ;
+            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
+            linkml:repr "str" ;
+            linkml:uri "http://www.w3.org/2001/XMLSchema#date" ],
         [ a linkml:TypeDefinition ;
             linkml:base "ElementIdentifier" ;
             linkml:comments "Used for inheritence and type checking" ;
@@ -273,35 +301,7 @@
             linkml:imported_from "linkml:types" ;
             linkml:name "objectidentifier" ;
             linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/ns/shex#iri" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "XSDTime" ;
-            linkml:definition_uri "https://w3id.org/linkml/Time" ;
-            linkml:description "A time object represents a (local) time of day, independent of any particular day" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "time" ;
-            linkml:notes "URI is dateTime because OWL reasoners don't work with straight date or time" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#dateTime" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "URI" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uri" ;
-            linkml:description "a complete URI" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "uri" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ],
-        [ a linkml:TypeDefinition ;
-            linkml:base "URIorCURIE" ;
-            linkml:definition_uri "https://w3id.org/linkml/Uriorcurie" ;
-            linkml:description "a URI or a CURIE" ;
-            linkml:from_schema "https://w3id.org/linkml/types" ;
-            linkml:imported_from "linkml:types" ;
-            linkml:name "uriorcurie" ;
-            linkml:repr "str" ;
-            linkml:uri "http://www.w3.org/2001/XMLSchema#anyURI" ] .
+            linkml:uri "http://www.w3.org/ns/shex#iri" ] .
 
 
 
diff --git a/linkml_model/shex/meta.shex b/linkml_model/shex/meta.shex
index 7a05bdb9..db7fe1fa 100644
--- a/linkml_model/shex/meta.shex
+++ b/linkml_model/shex/meta.shex
@@ -180,6 +180,8 @@ PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>
           <classification_rules> @<AnonymousClassExpression> * ;
           <slot_names_unique> @<Boolean> ? ;
           <represents_relationship> @<Boolean> ? ;
+          <disjoint_with> @<ClassDefinition> * ;
+          <children_are_mutually_disjoint> @<Boolean> ? ;
           <mixins> @<ClassDefinition> * ;
           <apply_to> @<ClassDefinition> * ;
           <any_of> @<AnonymousClassExpression> * ;
@@ -538,6 +540,8 @@ PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>
           sh1:group @<SlotDefinition> ? ;
           <is_grouping_slot> @<Boolean> ? ;
           <path_rule> @<PathExpression> ? ;
+          <disjoint_with> @<SlotDefinition> * ;
+          <children_are_mutually_disjoint> @<Boolean> ? ;
           <mixins> @<SlotDefinition> * ;
           <apply_to> @<SlotDefinition> * ;
           <range> @<Element> ? ;
@@ -648,6 +652,7 @@ PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>
           rdf:type [ <Annotatable> ] ? ;
           &<CommonMetadata_tes> ;
           rdf:type [ <CommonMetadata> ] ? ;
+          <unique_key_name> @<String> ;
           <unique_key_slots> @<SlotDefinition> + ;
           <extensions> @<Extension> * ;
           <annotations> @<Annotation> * ;
@@ -667,7 +672,7 @@ PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>
           <deprecated_element_has_exact_replacement> @<Uriorcurie> ? ;
           <deprecated_element_has_possible_replacement> @<Uriorcurie> ?
        ) ;
-       rdf:type [ <UniqueKey> ] ?
+       rdf:type [ <UniqueKey> ]
     )
 }
 
diff --git a/linkml_model/shex/meta.shexj b/linkml_model/shex/meta.shexj
index 2f3970f1..594581a2 100644
--- a/linkml_model/shex/meta.shexj
+++ b/linkml_model/shex/meta.shexj
@@ -912,6 +912,20 @@
                         "min": 0,
                         "max": 1
                      },
+                     {
+                        "type": "TripleConstraint",
+                        "predicate": "https://w3id.org/linkml/disjoint_with",
+                        "valueExpr": "https://w3id.org/linkml/ClassDefinition",
+                        "min": 0,
+                        "max": -1
+                     },
+                     {
+                        "type": "TripleConstraint",
+                        "predicate": "https://w3id.org/linkml/children_are_mutually_disjoint",
+                        "valueExpr": "https://w3id.org/linkml/Boolean",
+                        "min": 0,
+                        "max": 1
+                     },
                      {
                         "type": "TripleConstraint",
                         "predicate": "https://w3id.org/linkml/mixins",
@@ -3056,6 +3070,20 @@
                         "min": 0,
                         "max": 1
                      },
+                     {
+                        "type": "TripleConstraint",
+                        "predicate": "https://w3id.org/linkml/disjoint_with",
+                        "valueExpr": "https://w3id.org/linkml/SlotDefinition",
+                        "min": 0,
+                        "max": -1
+                     },
+                     {
+                        "type": "TripleConstraint",
+                        "predicate": "https://w3id.org/linkml/children_are_mutually_disjoint",
+                        "valueExpr": "https://w3id.org/linkml/Boolean",
+                        "min": 0,
+                        "max": 1
+                     },
                      {
                         "type": "TripleConstraint",
                         "predicate": "https://w3id.org/linkml/mixins",
@@ -3735,6 +3763,13 @@
                         },
                         "min": 0
                      },
+                     {
+                        "type": "TripleConstraint",
+                        "predicate": "https://w3id.org/linkml/unique_key_name",
+                        "valueExpr": "https://w3id.org/linkml/String",
+                        "min": 1,
+                        "max": 1
+                     },
                      {
                         "type": "TripleConstraint",
                         "predicate": "https://w3id.org/linkml/unique_key_slots",
@@ -3872,7 +3907,7 @@
                         "https://w3id.org/linkml/UniqueKey"
                      ]
                   },
-                  "min": 0
+                  "min": 1
                }
             ]
          }
diff --git a/linkml_model/sqlddl/meta.sql b/linkml_model/sqlddl/meta.sql
index a8fa9aa9..62fd3d59 100644
--- a/linkml_model/sqlddl/meta.sql
+++ b/linkml_model/sqlddl/meta.sql
@@ -133,6 +133,8 @@ CREATE TABLE class_definition (
 	classification_rules TEXT, 
 	slot_names_unique BOOLEAN, 
 	represents_relationship BOOLEAN, 
+	disjoint_with TEXT, 
+	children_are_mutually_disjoint BOOLEAN, 
 	is_a TEXT, 
 	mixins TEXT, 
 	apply_to TEXT, 
@@ -372,6 +374,8 @@ CREATE TABLE slot_definition (
 	slot_group TEXT, 
 	is_grouping_slot BOOLEAN, 
 	path_rule TEXT, 
+	disjoint_with TEXT, 
+	children_are_mutually_disjoint BOOLEAN, 
 	is_a TEXT, 
 	mixins TEXT, 
 	apply_to TEXT, 
@@ -404,6 +408,7 @@ CREATE TABLE slot_definition (
 );
 
 CREATE TABLE unique_key (
+	unique_key_name TEXT NOT NULL, 
 	unique_key_slots TEXT NOT NULL, 
 	extensions TEXT, 
 	annotations TEXT, 
@@ -423,7 +428,7 @@ CREATE TABLE unique_key (
 	deprecated_element_has_exact_replacement TEXT, 
 	deprecated_element_has_possible_replacement TEXT, 
 	class_definition_name TEXT, 
-	PRIMARY KEY (unique_key_slots, extensions, annotations, description, alt_descriptions, title, deprecated, todos, notes, comments, examples, in_subset, from_schema, imported_from, source, see_also, deprecated_element_has_exact_replacement, deprecated_element_has_possible_replacement, class_definition_name), 
+	PRIMARY KEY (unique_key_name, unique_key_slots, extensions, annotations, description, alt_descriptions, title, deprecated, todos, notes, comments, examples, in_subset, from_schema, imported_from, source, see_also, deprecated_element_has_exact_replacement, deprecated_element_has_possible_replacement, class_definition_name), 
 	FOREIGN KEY(class_definition_name) REFERENCES class_definition (name)
 );
 
diff --git a/linkml_model/types.py b/linkml_model/types.py
index b862f085..28f363bc 100644
--- a/linkml_model/types.py
+++ b/linkml_model/types.py
@@ -1,5 +1,5 @@
 # Auto generated from types.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:22
+# Generation date: 2022-01-22T01:10:59
 # Schema: types
 #
 # id: https://w3id.org/linkml/types
diff --git a/linkml_model/validation.py b/linkml_model/validation.py
index f1d7addb..89c90cbe 100644
--- a/linkml_model/validation.py
+++ b/linkml_model/validation.py
@@ -1,5 +1,5 @@
 # Auto generated from validation.yaml by pythongen.py version: 0.9.0
-# Generation date: 2021-12-28T23:40:33
+# Generation date: 2022-01-22T01:10:49
 # Schema: reporting
 #
 # id: https://w3id.org/linkml/reporting