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Here's a minimal example to reproduce:
cat << EOF >> fwd.fastq @LH00285:102:22KNYJLT3:2:1101:7768:1032 1:N:0:AACCATAGAA+CCATCTCGCC TCCCAACGGCAGCGTCTCCCTGACGACGCGTCCGCCCCTGTCACGCAGGTAACGACGGACGGCCCCGTCGAAGCCTTTCTCGGCGGTGACGTTTCCCACAGCGTCGAGGGTGAACTCGTAGCTCACTGTNTCTTATACACATCTCCGAGC + 9I9I-IIII9-III-IIIII99IIII9IIIII9II9II9I9IIIIIIIIIIIIIIIIIIIIIIIIII-IIIIIIIIIIIII9IIII9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII#IIIIIIIIIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:10542:1032 1:N:0:ANCCATAGAA+CCATCTCGCC TNCTTCATACAAAACTGATATTCCTTATCCATGTTTCTTTACACATGTTCGGGAACTTTGGCTAAGTGTGGTATCTATATTCAATACGTCTGTAGATGTTGAATCTTTTCATTTTCATCCAGCTTTACANTCTATTCGATTTGATCTTTT + 9#IIIIIII-9III9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII#III-II9IIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:11762:1032 1:N:0:ANCCATAGAA+CCATCTCGCC TNTCTGTTCGGAATGGAAAGAGGTGGAACCCTTGTGCTATAACCACCTAAATTAAGGACTTAGCTGTACTAAATAATTTTTTCAATCAACCACTACAAAAGATCAACACAGTTTAGCACAAAGTCCCAANCTACCGTCTATTCAATTTTA + I#II-IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII#IIIIIIIIIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:13186:1032 1:N:0:ANCCATAGAA+CCATCTCGCC TNAGCGGTAAAGAGAGAGATATTTTTTAAGAAATCCCGTCTGTTACTCATAACATCATTCTATTTAAATAGGCTTATTTACAGAAATAAGGCAATGAATACGGGTTGCGATATTGATACCAGTACAAACNGTGGGAAGCCGCCTCCTTAT + 9#I9II9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII#IIIIIIIIIIIIIIIIIIII EOF cat << EOF >> rev.fastq @LH00285:102:22KNYJLT3:2:1101:7768:1032 2:N:0:AACCATAGAA+CCATCTCGCC TGAGCTACGAGTTCACCCTCGACGCTGTGGGAAACGTCACCGCCGAGAAAGGCTTCGACGGGGCCGTCCGTCGTTACCTGCGTGACAGGGGCGGACGCGTCGTCAGGGAGACGCTGCCGTCGGGACTGTCTCTTATACATATCTGACGCT + 9IIIIIIIIIII9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII9IIIIIIIIIIIIIIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:10542:1032 2:N:0:ANCCATAGAA+CCATCTCGCC TGGTAGATGCAGGTTCCTGTAAAAGAGACCTTTACCACGAAAGATAAGATCCAGTAAAAGTGAATGAAAAGATCAAATCGAAGAGATTGTAAAGCTGGATGAAAATGAAAAGATTCAACATCTACAGACGTATTGAATATAGATACCACA + IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:11762:1032 2:N:0:ANCCATAGAA+CCATCTCGCC TCTATAGCTTTACTACCGTACGGCTATGGCAATGCTTAAAATTGAATAGACGGTAGGTTGGGACTTTGTGCTAAACTGTGTTGATCTTTTGTAGTGGTTGATTGAAAAAATTATTTAGTACAGCTAAGTCCTTAATTTAGGTGGTTATAG + 9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:13186:1032 2:N:0:ANCCATAGAA+CCATCTCGCC TCAGAATATTGCCCGTGAGCTAGGCCGTCCGGTTAAATGGAACCCGGCTACATTAAGCTTCGGTAATGATAAGGAGGCGGCTTCCCACCGTTTGTACTGGTATCAATATCGCAACCCGTATTCATTGCCTTATTTCTGTAAATAAGCCTA + IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII EOF
seqtk mergepe fwd.fastq rev.fastq | seqtk sample -s 4 - 2
@LH00285:102:22KNYJLT3:2:1101:13186:1032 2:N:0:ANCCATAGAA+CCATCTCGCC TCAGAATATTGCCCGTGAGCTAGGCCGTCCGGTTAAATGGAACCCGGCTACATTAAGCTTCGGTAATGATAAGGAGGCGGCTTCCCACCGTTTGTACTGGTATCAATATCGCAACCCGTATTCATTGCCTTATTTCTGTAAATAAGCCTA + IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII @LH00285:102:22KNYJLT3:2:1101:10542:1032 1:N:0:ANCCATAGAA+CCATCTCGCC TNCTTCATACAAAACTGATATTCCTTATCCATGTTTCTTTACACATGTTCGGGAACTTTGGCTAAGTGTGGTATCTATATTCAATACGTCTGTAGATGTTGAATCTTTTCATTTTCATCCAGCTTTACANTCTATTCGATTTGATCTTTT + 9#IIIIIII-9III9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII9IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII#III-II9IIIIIIIIIIIII
The text was updated successfully, but these errors were encountered:
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Here's a minimal example to reproduce:
data
command:
seqtk mergepe fwd.fastq rev.fastq | seqtk sample -s 4 - 2
output
The text was updated successfully, but these errors were encountered: