diff --git a/knossos_cuber/knossos_cuber.py b/knossos_cuber/knossos_cuber.py index 3f65c63..c793557 100644 --- a/knossos_cuber/knossos_cuber.py +++ b/knossos_cuber/knossos_cuber.py @@ -975,12 +975,14 @@ def knossos_cuber(config, log_fn): source_dims = literal_eval(config.get('Dataset', 'source_dims')) boundaries = (source_dims[0], source_dims[1], len(all_source_files)) config.set('Dataset', 'boundaries', str(boundaries)) - dataset_base_path = config.get('Project', 'target_path') + '/mag1/' + dataset_base_path = config.get('Project', 'target_path') scale = literal_eval(config.get('Dataset', 'scaling')) - exp_name = config.get('Project', 'exp_name') + '_mag1' + exp_name = config.get('Project', 'exp_name') - write_knossos_conf(dataset_base_path, scale, boundaries, exp_name, + write_knossos_conf(dataset_base_path + "/", scale, boundaries, exp_name, + mag=1) + write_knossos_conf(dataset_base_path + "/mag1/", scale, boundaries, exp_name, mag=1) total_mag1_time = time.time() - mag1_ref_time