diff --git a/Makefile b/Makefile index 3a8972a..7851dc7 100644 --- a/Makefile +++ b/Makefile @@ -1,4 +1,4 @@ -.PHONY: all test help clean cleanall cluster download download_asms download_cobs match map format report viewconf conda +.PHONY: all test help clean cleanall cluster download download_asms download_cobs match map format report config conda SHELL=/usr/bin/env bash -eo pipefail DATETIME=$(shell date -u +"%Y_%m_%dT%H_%M_%S") @@ -92,7 +92,7 @@ map: ## Map candidates to assemblies (candidates -> alignments) ## Reporting ## ############### -viewconf: ## View configuration without comments +config: ## Print configuration without comments @cat config.yaml \ | perl -pe 's/ *#.*//g' \ | grep --color='auto' -E '.*\:' diff --git a/README.md b/README.md index a0905b4..f2fe7b7 100644 --- a/README.md +++ b/README.md @@ -253,7 +253,7 @@ Here's a list of all implemented commands (to be executed as `make {command}`): ############### ## Reporting ## ############### - viewconf View configuration without comments + config Print configuration without comments report Generate Snakemake report ########## ## Misc ##