taxqueue

Taxonomy assignment with task queue

Front End

Files consist of main page

index.html : Main page HTML
uploader.html : Fine uploader HTML
js/filetransfer.js : Enqueue file to the queue
js/injectresults.js : Add result table to the site

Back End

RabbitMQ Message Format

JSON
keys:

{	randomfolder, 
	count, 
	taskname, 
	primerseq, 
	checkFwd, 
	checkRev, 
	taxalg, 
	rdpdb, 
	conflevel, 
	trlen, 
	"#"			}

Files touching queue.txt/results.txt

enqueue.php : (w)/()
dequeue.php : (r,w)/(w)
vallidate.php : (r)/(r)
results.php : (r)/(r)
deletefolder.php : ()/(w)

queue.txt File format

tab separated string
{$taskname} queued

results.txt File format

tab separated string
{$taskname} succeeded {$archivePath} succeeded <tab> ID
{$taskname} failed - {$reason} <tab> ID