Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

human whole genome #21

Open
aardes opened this issue Sep 6, 2024 · 1 comment
Open

human whole genome #21

aardes opened this issue Sep 6, 2024 · 1 comment
Labels
question Further information is requested

Comments

@aardes
Copy link

aardes commented Sep 6, 2024

Nice work,

Can we use BAMdash for the human whole genome or exome ? or we need to specify the target region as a reference file?

@jonas-fuchs jonas-fuchs added the question Further information is requested label Sep 6, 2024
@jonas-fuchs
Copy link
Owner

Hi thanks! You have to only specify the reference id. So you should be able to display a whole chromosomes although I have never tried. But specify the --binsize argument to at least 100 as all the coverage information is stored within the html. Multiple chromosomes/ref ids at once are not possible at the moment.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
question Further information is requested
Projects
None yet
Development

No branches or pull requests

2 participants