DESCRIPTION

Package: biom
Version: 0.4.0
Date: 2015-06-19
Maintainer: Paul J. McMurdie <mcmurdie@stanford.edu>
License: GPL-2
Title: An interface package (beta) for the BIOM file
    format.
Type: Package
Author: Paul J. McMurdie <mcmurdie@stanford.edu> and
    Joseph Paulson <jpaulson@jimmy.harvard.edu>
BugReports: https://github.com/joey711/biom/issues
URL: https://github.com/joey711/biom/,
    http://biom-format.org/
Description: This is an R package for interfacing with the
    BIOM format. This package includes basic tools for
    reading biom-format files, accessing and subsetting
    data tables from a biom object (which is more complex
    than a single table), as well as limited support for
    writing a biom-object back to a biom-format file. The
    design of this API is intended to match the python API
    and other tools included with the biom-format project,
    but with a decidedly "R flavor" that should be familiar
    to R users. This includes S4 classes and methods, as
    well as extensions of common core functions/methods.
Imports:
    plyr (>= 1.8),
    RJSONIO (>= 1.0.3),
    Matrix (>= 1.0.12),
    rhdf5
Depends:
    R (>= 3.0.0),
    methods
Suggests:
    testthat (>= 0.7.1),
    knitr (>= 1.3)
VignetteBuilder: knitr
Collate:
    'allClasses.R'
    'allPackage.R'
    'IO-methods.R'
    'BIOM-class.R'
    'validity-methods.R'