The Shiny Transcriptome Analysis Resource Tool (START) App: A Web-Based RNAseq Analysis and Visualization Resource
+The app is hosted on Shinyapps.io here: https://kcvi.shinyapps.io/START/
+To run this app locally on your machine, download R or RStudio and run the following commands once to set up the environment:
+
+install.packages(c("reshape2","ggplot2","ggthemes","gplots","ggvis","dplyr","tidyr","DT",
+ "RColorBrewer","pheatmap","shinyBS","plotly","markdown"))
+## try http:// if https:// URLs are not supported
+source("https://bioconductor.org/biocLite.R")
+biocLite(c("limma","edgeR"))
+You may now run the shiny app with just one command in R:
+shiny::runGitHub("STARTapp", "jminnier")Jonathan Nelson, Jiri Sklenar, Anthony Barnes, Jessica Minnier. The Knight Cardiovascular Institute, Oregon Health & Science University, Portland, OR 97239-3098, USA.
+Instructions can be found here: https://github.com/jminnier/STARTapp/blob/master/instructions/Instructions.pdf
+This shiny code is licensed under the GPLv3. Please see the file LICENSE.txt for information.
+START (Shiny Transcriptome Analysis Resource Tool) App
+Shiny App for analysis and visualization of transcriptome data.
+Copyright (C) 2014-2016 Jessica Minnier
+
+This program is free software: you can redistribute it and/or modify
+it under the terms of the GNU General Public License as published by
+the Free Software Foundation, either version 3 of the License, or
+(at your option) any later version.
+
+This program is distributed in the hope that it will be useful,
+but WITHOUT ANY WARRANTY; without even the implied warranty of
+MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+GNU General Public License for more details.
+
+You should have received a copy of the GNU General Public License
+along with this program. If not, see <http://www.gnu.org/licenses/>.
+
+You may contact the author of this code, Jessica Minnier, at <minnier@ohsu.edu>