.zshrc.local

export PATH="$PATH:/usr/local:/usr/local/bin:/opt/local/share/texmf-texlive/dvips/base:/bin:/usr/texbin:/Users/jchevall/bin:/Users/jchevall/bc99lx/bc03/src:/Users/jchevall/bc99lx/Mock:/Users/jchevall/bc99lx/is_97:/Users/jchevall/MILLENNIUM:/Users/jchevall/IDL:/Users/jchevall/idlutils/bin:/Applications/rsi/idl/bin:/Users/jchevall/TeX:/opt/openmpi/bin:opt/local/bin:/Users/jchevall/Bin:/Users/jchevall/profilers/TAU/apple/bin:/Users/jchevall/bin/wcstools-3.9.5"

export PATH="/Users/jchevall/anaconda3/bin:/usr/local/bin:/usr/local/Cellar/open-mpi/2.0.1/lib:/usr/local/Cellar/open-mpi/2.0.1/include:/Library/Frameworks/Python.framework/Versions/3.6/bin:$PATH"

# Avoid shared history
unsetopt share_history

export SAVEHIST=10000

# Skygo
alias SkyGo_reset="\rm /Users/jchevall/Library/Application\ Support/Sky\ Go/qgd-redux-auth.json"

# TOPCAT
alias topcat="java -Xmx1024M -jar /Applications/TOPCAT.app/Contents/Resources/Java/topcat-full.jar"

# Syntax highlighting
export LSCOLORS="gxfxcxdxfxegedabagacad"

alias lsdir="ls -ltr -d */"

# Sonos
alias airsonos="n use 0.10.28 /usr/local/bin/airsonos"

# GNU sed
alias sed="gsed"

# Further syntax coloring with zprezto (see /Users/jchevall/.zprezto/modules/syntax-highlighting/README)
ZSH_HIGHLIGHT_STYLES[globbing]='none'

# Use OpenBLAS with a single thread
export OPENBLAS_NUM_THREADS=1

# Avoid creation of spurious files when creating tar archive on a Mac OSX
export COPYFILE_DISABLE=true

# Default editor
export EDITOR="vim"
export VISUAL=vim
export EDITOR="$VISUAL"

# Python - Homebrew related stuff
export GDK_PIXBUF_MODULEDIR="/usr/local/lib/gdk-pixbuf-2.0/2.10.0/loaders"
export GTK_PATH="/usr/local/lib/gtk-2.0"

export HOMEBREW_GITHUB_API_TOKEN="7de96236b5b619d6e70682138ddb016c2eddad0a"
export CHANGELOG_GITHUB_TOKEN="86fba8baa15053e40cfd05c39af97e1345b6ffea"

alias push_docs="git add -u ; git commit -m \"Updated docs\" ;  git push origin master"

alias gittag="git for-each-ref --sort=taggerdate --format '%(refname)' refs/tags"

export PYTHONPATH="/usr/local/lib/python2.7/site-packages:/Users/jchevall/python:/Users/jchevall/JWST/code" 
export PYENV_ROOT="$HOME/.pyenv"
export PATH="$PYENV_ROOT:$PATH"

if command -v pyenv 1>/dev/null 2>&1; then
 eval "$(pyenv init -)"
fi


export JWSTPYTOOLS="/Users/jchevall/JWST/code/JWSTpytools-0.0.3"

. /Users/jchevall/anaconda3/etc/profile.d/conda.sh

# This solves some installation issues with Python Anaconda and UTF-8 encoding
# see http://stackoverflow.com/questions/19961239/pelican-3-3-pelican-quickstart-error-valueerror-unknown-locale-utf-8
export LC_ALL=en_US.UTF-8
export LANG=en_US.UTF-8

# Set Anaconda env 
#conda activate base

unset PYTHONPATH 

# Default Fortran compiler
GCC_VER="6"
export FC="/usr/local/bin/gfortran-${GCC_VER}"

# Default C compiler
export CC="/usr/local/bin/gcc-${GCC_VER}"

# Default C++ compiler
export CXX="/usr/local/bin/g++-${GCC_VER}"

# OpenMPI variables
export OMPI_FC=$FC
export OMPI_CC=$CC
export OMPI_CXX=$CXX

# Intel Fortran
#source /opt/intel/composer_xe_2015.1.108/mkl/bin/intel64/mklvars_intel64.sh

# Default print: two-sided, A4
alias lp_default="lp -o sides=two-sided-long-edge -o media=A4"

# MPI env
alias g++="g++-"${GCC_VER}
alias gcc="gcc-"${GCC_VER}
alias gfortran="gfortran-${GCC_VER} -ffree-line-length-none"
alias gnu95="gfortran-${GCC_VER} -ffree-line-length-none"

# BC03 software stuff
export bc97="/Users/jchevall/bc99lx"
export bc03="/Users/jchevall/bc99lx/bc03/src"
source	$bc03/.bc_bash

alias bc99="csh $bc97/is_97/bc99.sh"
alias cb09="csh $bc97/is_97/cb09.sh"
alias iso99="csh $bc97/Isochrones/isoc_bc99.sh"

###################################################
# START BEAGLE environment variables
###################################################
export CMAKE_MACROS="/Users/jchevall/Coding/cmake-macros"
export CMAKE_DEPENDENCIES="/Users/jchevall/Coding/cmake-dependencies"
export BEAGLE_PARAM_DIR="/Users/jchevall/Coding/BEAGLE/files/params"

export BEAGLE_TEST_FILES="/Users/jchevall/Coding/BEAGLE/files/tests"

export BEAGLE_ROOT="/Users/jchevall/Coding/BEAGLE/files"

export BEAGLE_TEMPLATES="${BEAGLE_ROOT}/templates"
export BEAGLE_FILTERS="${BEAGLE_ROOT}/filters"
export BEAGLE_DATA="${BEAGLE_ROOT}/data"
export BEAGLE_DUST="${BEAGLE_ROOT}/dust"

export BEAGLE_SF_CHE="${BEAGLE_ROOT}/sf_che"
export BEAGLE_RESULTS="${BEAGLE_ROOT}/results"

export PYP_BEAGLE="/Users/jchevall/Coding/PyP-BEAGLE"

# This environment variable is already defined by BC03 routines, but here you
# redefine it to be sure that the filters used are those in the BEAGLE directory
# tree 
export FILTERS="${BEAGLE_FILTERS}/FILTERBIN.RES"

###################################################
# END BEAGLE environment variables
###################################################

# To split a PDF in several PDF with N pages each
alias PDFsplit="/Users/jchevall/bin/PDFsplit.py"

alias fv="open -a fv"

# Tmuxinator
source ~/bin/tmuxinator.zsh

# Bash, Zsh and fish completion support for git-flow (AVH Edition).
# see https://github.com/petervanderdoes/git-flow-completion
source ~/.git-flow-completion.zsh

# IDL
export IDLUTILS_DIR="/Users/jchevall/idlutils"
export IDL_DIR="/Applications/exelis/idl84"
export IDL_PATH="/Users/jchevall/IDL:$IDL_DIR/lib:$IDLUTILS_DIR/pro:$IDLUTILS_DIR/goddard/pro"
export IDL_STARTUP="/Users/jchevall/IDL/idl_startup.pro"

alias	idl="$IDL_DIR/bin/idl"

# UREKA (includes IRAF and toher stuff)
alias ureka="open ~/Desktop/Ureka_primary.terminal"
export iraf="~/iraf/iraf/"

# Add iraf setup commands
if [ -f /Users/jchevall/.iraf/setup.sh ] ; then
  source /Users/jchevall/.iraf/setup.sh
fi

alias openprev="open -a preview"

alias update_zsh="source ~/.zshrc.local ; rehash"

# Default commands for ps2eps conversion
alias myps2eps="ps2eps -B -f -l -H"
alias myps2eps_land="ps2eps -B -f -l -H -R -"
alias myps2eps_land_anti="ps2eps -B -f -l -H -R +"

alias sam2p_300="sam2p -l:gs=-r300"
alias sam2p_800="sam2p -l:gs=-r800"

# GOOGLE PROFILER
export HEAP_PROFILE_ALLOCATION_INTERVAL=10737418240 
export CPUPROFILE_FREQUENCY=1000

#########################
##### Other aliases ####
#########################
#
# Common aliases
alias rsync="rsync -avz --progress"
alias cp="cp -p"
alias scp="scp -p"

alias df90="cd /Users/jchevall/bc99lx/Mock/F90/NEW_F90/F90_TO_RELEASE"

# ---> Tmux
alias tmux="tmux -u"

# ---> MATLAB
alias	matlab="/Applications/MATLAB_R2011b.app/bin/matlab"

# ---> TextEdit
alias	textedit="/Applications/TextEdit.app/Contents/MacOS/TextEdit"

# ---> TextWrangler
alias	wrang="/Applications/TextWrangler.app/Contents/MacOS/TextWrangler"


# Close windows though terminal command
# cw Adobe\ Reader foo.pdf
# will close foo.pdf
cw() {
osascript <<EOF
tell application "$1"
    set windowCount to number of windows
    repeat with x from 1 to windowCount
        set docName to (name of document of front window)
        if (docName is equal to "$2") then
            close window x
        end if
    end repeat
end tell
EOF
}