DESCRIPTION

Package: iscream
Title: Integrating Single-Cell Results for Exploring and Analyzing Methylation
Version: 0.0.0.9000
Authors@R: c(
    person("James", "Eapen", email = "james.eapen@vai.org", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-6016-3598")),
    person("Jacob", "Morrison", email = "jacob.morrison@vai.org", role = c("aut"), comment = c(ORCID = "0000-0001-8592-4744")),
    person("Hui", "Shen", email = "hui.shen@vai.org", role = c("ths", "fnd"), comment = c(ORCID = "0000-0001-9767-4084")))
Description: Fast and memory efficient methylation bed file reader and analyzer.
             It can be used with both bulk and scWGBS data.
URL: https://huishenlab.github.io/iscream/, https://github.com/huishenlab/iscream/
BugReports: https://github.com/huishenlab/iscream/issues/
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
LinkingTo:
    Rcpp,
    RcppArmadillo,
    RcppProgress,
    RcppSpdlog,
    stringfish
Imports:
    Rcpp,
    Matrix,
    data.table,
    parallelly,
    stringfish
Suggests:
    knitr,
    bsseq,
    DelayedArray,
    GenomicRanges,
    testthat (>= 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: yes
OS_type: unix
SystemRequirements: htslib: htslib-devel (rpm) or libhts-dev (deb)