convert_aligned_data.m

% convert trial aligned data to v7.3 (h5py)    

%masterPath = "/Volumes/Aaron's 5TB HD/ppc/2P_data/";
masterPath = "/Volumes/Aaron's PPC/ppc/2P_data/";
outputPath = "/Users/akuan/Dropbox (HMS)/htem_team/projects/PPC_project/2P_data/trialAlignedData/";
mouse = 'LD187';

%my_sessions = {'LD187_141216', 'LD187_141215', 'LD187_141214', 'LD187_141213'};
my_sessions = {'LD187_141216','LD187_141215','LD187_141214','LD187_141213','LD187_141212',...
            'LD187_141211','LD187_141209','LD187_141208','LD187_141207','LD187_141206'}; 

for i = 1:length(my_sessions)
    session = my_sessions{i};
    input = fullfile(masterPath, 'code_workspace',mouse,'syncedData',[session '.mat']);
    disp(input)
    trialAlignedData = load(input).trialAlignedData;
    output = fullfile(outputPath, [session '.mat']);
    disp(output)
    save(output, 'trialAlignedData', '-v7.3');
end
%%
    
 %{   
trialAlignedData.SNR_raw = snr;
save(fullfile(output_dir,session),'trialAlignedData');
end
%% Save data as .mat
    
    output_dir =  fullfile(masterPath, 'code_workspace',mouse,'selectMetrics');   
    save(fullfile(output_dir,session),'AUC_fullTrial', 'AUC_blocks', 'RL_fullTrial', 'RL_blocks',...
        'selectivity_AUC','selectivity_AUC_blocks','selectivity_RL','selectivity_RL_blocks',...
        'choiceMI','choiceMI_max','choiceMI_max_idx','maxMI_sig','choiceMI_prctile','choiceMI_pref','-v7.3');
%}