From 12edee8264f34846e22ea3bfc0a55f2532fe8d13 Mon Sep 17 00:00:00 2001
From: Haley Hunter-Zinck <haley.hunterzinck@sagebase.org>
Date: Thu, 14 Apr 2022 10:08:53 -0700
Subject: [PATCH] add all phase 2 cohorts

---
 2022-03-08_haley_create_phase_2_placeholders.R | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/2022-03-08_haley_create_phase_2_placeholders.R b/2022-03-08_haley_create_phase_2_placeholders.R
index 5e2a53c..8755c3a 100644
--- a/2022-03-08_haley_create_phase_2_placeholders.R
+++ b/2022-03-08_haley_create_phase_2_placeholders.R
@@ -13,10 +13,9 @@ synLogin()
 
 # synapse
 synid_folder_upload <- "syn20852283"
-#synid_folder_upload <- "syn27001905"
 
 # parameters
-cohorts <- c("OVARIAN", "ESOPHAGO", "RENAL", "MELANOMA")
+cohorts <- c("OVARIAN", "ESOPHAGO", "RENAL", "MELANOMA", "CRC2", "NSCLC2")
 sites <- c("DFCI", "MSK", "UHN", "VICC")
 file_placeholder <- "placeholder.txt"