Attempt fix windows pathing issues

hdmf-dev · Jan 15, 2025 · 5f658d9 · 5f658d9
1 parent 2c67ef2
commit 5f658d9
Showing 1 changed file with 13 additions and 7 deletions.
diff --git a/tests/unit/base_tests_zarrio.py b/tests/unit/base_tests_zarrio.py
@@ -1029,11 +1029,11 @@ def test_basic(self):
                 export_io.export(src_io=read_io)
 
         self.assertTrue(os.path.exists(self.store_path[1]))
-        self.assertEqual(os.path.relpath(foofile.container_source), self.store_path[0])
+        self.assertEqual(foofile.container_source, os.path.abspath(self.store_path[0]).replace("\\", "/"))
 
         with ZarrIO(self.store_path[1], manager=get_foo_buildmanager(), mode="r") as read_io:
             read_foofile = read_io.read()
-            self.assertEqual(os.path.relpath(read_foofile.container_source), self.store_path[1])
+            self.assertEqual(read_foofile.container_source, os.path.abspath(self.store_path[1]).replace("\\", "/"))
             self.assertContainerEqual(foofile, read_foofile, ignore_hdmf_attrs=True)
 
     def test_basic_container(self):
@@ -1051,11 +1051,11 @@ def test_basic_container(self):
                 export_io.export(src_io=read_io, container=read_foofile)
 
         self.assertTrue(os.path.exists(self.store_path[1]))
-        self.assertEqual(os.path.relpath(foofile.container_source), self.store_path[0])
+        self.assertEqual(foofile.container_source, os.path.abspath(self.store_path[0]).replace("\\", "/"))
 
         with ZarrIO(self.store_path[1], manager=get_foo_buildmanager(), mode="r") as read_io:
             read_foofile = read_io.read()
-            self.assertEqual(os.path.relpath(read_foofile.container_source), self.store_path[1])
+            self.assertEqual(read_foofile.container_source, os.path.abspath(self.store_path[1]).replace("\\", "/"))
             self.assertContainerEqual(foofile, read_foofile, ignore_hdmf_attrs=True)
 
     def test_container_part(self):
@@ -1145,7 +1145,9 @@ def test_soft_link_group(self):
         with ZarrIO(self.store_path[1], manager=get_foo_buildmanager(), mode="r") as read_io:
             read_foofile2 = read_io.read()
             if isinstance(self.store_path[1], str):
-                self.assertEqual(os.path.relpath(read_foofile2.foo_link.container_source), self.store_path[1])
+                self.assertEqual(
+                    read_foofile2.foo_link.container_source, os.path.abspath(self.store_path[1]).replace("\\", "/")
+                )
             else:
                 self.assertEqual(read_foofile2.foo_link.container_source, self.store_path[1].path)
 
@@ -1175,7 +1177,9 @@ def test_external_link_group(self):
             read_foofile2 = read_io.read()
             # make sure the linked group is read from the first file
             if isinstance(self.store_path[0], str):
-                self.assertEqual(os.path.relpath(read_foofile2.foo_link.container_source), self.store_path[0])
+                self.assertEqual(
+                    read_foofile2.foo_link.container_source, os.path.abspath(self.store_path[0]).replace("\\", "/")
+                )
             else:
                 self.assertEqual(read_foofile2.foo_link.container_source, self.store_path[0].path)
 
@@ -1232,7 +1236,9 @@ def test_external_link_dataset(self):
         with ZarrIO(self.store_path[2], manager=get_foo_buildmanager(), mode="r") as read_io:
             read_foofile2 = read_io.read()
             # make sure the linked dataset is read from the first file
-            self.assertEqual(os.path.relpath(read_foofile2.foofile_data.store.store.path), self.store_path[0])
+            self.assertEqual(
+                read_foofile2.foofile_data.store.store.path, os.path.abspath(self.store_path[0]).replace("\\", "/")
+            )
 
     def test_external_link_link(self):
         """Test that exporting a written file with external links to external links maintains the links."""