From 254d6fafdb73302833306734eab7138adccd3dee Mon Sep 17 00:00:00 2001 From: Timothee Cezard Date: Fri, 1 Dec 2023 09:45:49 +0000 Subject: [PATCH] Update CNV-file-formats.md --- docs/resources/CNV-file-formats.md | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/docs/resources/CNV-file-formats.md b/docs/resources/CNV-file-formats.md index 0c36984..6f42fe9 100644 --- a/docs/resources/CNV-file-formats.md +++ b/docs/resources/CNV-file-formats.md @@ -6,10 +6,11 @@ date: 2019-12-12 --- ### VCF - +VCF 4.4 is the most appropriate VCF format to store Structural variants including copy number variants +* VCF specification [v4.4 PDF](https://samtools.github.io/hts-specs/VCFv4.4.pdf) +* VCF specification [v4.3 PDF](https://samtools.github.io/hts-specs/VCFv4.3.pdf) * VCF specification [v4.2 PDF](https://samtools.github.io/hts-specs/VCFv4.2.pdf) - ### BED files and other columnar segment files * BED file documentation at [UCSC genome browser](https://genome.ucsc.edu/FAQ/FAQformat.html#format1) @@ -26,4 +27,4 @@ For information about some of the used schemas please see the --- -last update 2023-07-07 by @mbaudis +last update 2023-07-07 by @tcezard