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ci.yml
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name: CI
on: [push, pull_request]
jobs:
SeqTests:
name: Tests ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
runs-on: ${{ matrix.os }}
env:
P4EST_ROOT_DIR: "/opt/p4est/2.3.6/"
JULIA_PETSC_LIBRARY: "/opt/petsc/3.15.4/lib/libpetsc"
strategy:
fail-fast: false
matrix:
version:
- '1.9'
os:
- ubuntu-latest
arch:
- x64
steps:
- uses: actions/checkout@v2
- name: Cache p4est
id: cache-p4est
uses: actions/cache@v2
with:
path: ${{env.P4EST_ROOT_DIR}}
key: ${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}-
restore-keys: |
${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}-
${{ runner.os }}-build-
${{ runner.os }}-
#- name: Cache petsc
# id: cache-petsc
# uses: actions/cache@v2
# with:
# path: ${{env.JULIA_PETSC_LIBRARY}}
# key: ${{ runner.os }}-build-${{ env.JULIA_PETSC_LIBRARY }}-
# restore-keys: |
# ${{ runner.os }}-build-${{ env.JULIA_PETSC_LIBRARY }}-
# ${{ runner.os }}-build-
# ${{ runner.os }}-
- uses: julia-actions/setup-julia@v1
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
- name: Install p4est/petsc dependencies
run: |
sudo apt-get update
sudo apt-get install -y wget gfortran g++ openmpi-bin libopenmpi-dev
- name: Install p4est
if: steps.cache-p4est.outputs.cache-hit != 'true'
run: |
# Install p4est 2.3.6 from sources
CURR_DIR=$(pwd)
PACKAGE=p4est
VERSION=2.3.6
INSTALL_ROOT=/opt
P4EST_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION
TAR_FILE=$PACKAGE-$VERSION.tar.gz
URL="https://github.com/p4est/p4est.github.io/raw/master/release"
ROOT_DIR=/tmp
SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION
BUILD_DIR=$SOURCES_DIR/build
wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE
mkdir -p $SOURCES_DIR
tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1
cd $SOURCES_DIR
./configure --prefix=$P4EST_INSTALL --without-blas --without-lapack --enable-mpi -disable-dependency-tracking
make --quiet
make --quiet install
rm -rf $ROOT_DIR/$TAR_FILE $SOURCES_DIR
cd $CURR_DIR
- name: Install petsc
# if: steps.cache-petsc.outputs.cache-hit != 'true'
run: |
CURR_DIR=$(pwd)
PACKAGE=petsc
VERSION=3.15.4
INSTALL_ROOT=/opt
PETSC_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION
TAR_FILE=$PACKAGE-$VERSION.tar.gz
URL="https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/"
ROOT_DIR=/tmp
SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION
BUILD_DIR=$SOURCES_DIR/build
wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE
mkdir -p $SOURCES_DIR
tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1
cd $SOURCES_DIR
./configure --prefix=$PETSC_INSTALL --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 \
--download-mumps --download-scalapack --download-parmetis --download-metis \
--download-ptscotch --with-debugging --with-x=0 --with-shared=1 \
--with-mpi=1 --with-64-bit-indices
make
make install
- run: julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build(); Pkg.precompile()'
- run: julia -O1 --project=. --color=yes --check-bounds=yes test/sequential/runtests.jl
- uses: julia-actions/julia-processcoverage@v1
- uses: codecov/codecov-action@v1
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
with:
file: lcov.info
MPITests:
name: Tests ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
runs-on: ${{ matrix.os }}
env:
P4EST_ROOT_DIR: "/opt/p4est/2.3.6/"
JULIA_PETSC_LIBRARY: "/opt/petsc/3.15.4/lib/libpetsc"
strategy:
fail-fast: false
matrix:
version:
- '1.9'
os:
- ubuntu-latest
arch:
- x64
steps:
- uses: actions/checkout@v2
- name: Cache p4est
id: cache-p4est
uses: actions/cache@v2
with:
path: ${{env.P4EST_ROOT_DIR}}
key: ${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}-
restore-keys: |
${{ runner.os }}-build-${{ env.P4EST_ROOT_DIR }}-
${{ runner.os }}-build-
${{ runner.os }}-
#- name: Cache petsc
# id: cache-petsc
# uses: actions/cache@v2
# with:
# path: ${{env.JULIA_PETSC_LIBRARY}}
# key: ${{ runner.os }}-build-${{ env.JULIA_PETSC_LIBRARY }}-
# restore-keys: |
# ${{ runner.os }}-build-${{ env.JULIA_PETSC_LIBRARY }}-
# ${{ runner.os }}-build-
# ${{ runner.os }}-
- uses: julia-actions/setup-julia@v1
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
- name: Install p4est/petsc dependencies
run: |
sudo apt-get update
sudo apt-get install -y wget gfortran g++ openmpi-bin libopenmpi-dev
- name: Install p4est
if: steps.cache-p4est.outputs.cache-hit != 'true'
run: |
# Install p4est 2.3.6 from sources
CURR_DIR=$(pwd)
PACKAGE=p4est
VERSION=2.3.6
INSTALL_ROOT=/opt
P4EST_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION
TAR_FILE=$PACKAGE-$VERSION.tar.gz
URL="https://github.com/p4est/p4est.github.io/raw/master/release"
ROOT_DIR=/tmp
SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION
BUILD_DIR=$SOURCES_DIR/build
wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE
mkdir -p $SOURCES_DIR
tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1
cd $SOURCES_DIR
./configure --prefix=$P4EST_INSTALL --without-blas --without-lapack --enable-mpi -disable-dependency-tracking
make --quiet
make --quiet install
rm -rf $ROOT_DIR/$TAR_FILE $SOURCES_DIR
cd $CURR_DIR
- name: Install petsc
# if: steps.cache-petsc.outputs.cache-hit != 'true'
run: |
CURR_DIR=$(pwd)
PACKAGE=petsc
VERSION=3.15.4
INSTALL_ROOT=/opt
PETSC_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION
TAR_FILE=$PACKAGE-$VERSION.tar.gz
URL="https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/"
ROOT_DIR=/tmp
SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION
BUILD_DIR=$SOURCES_DIR/build
wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE
mkdir -p $SOURCES_DIR
tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1
cd $SOURCES_DIR
./configure --prefix=$PETSC_INSTALL --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 \
--download-mumps --download-scalapack --download-parmetis --download-metis \
--download-ptscotch --with-debugging --with-x=0 --with-shared=1 \
--with-mpi=1 --with-64-bit-indices
make
make install
- name: add MPIPreferences
shell: julia --color=yes --project=. {0}
run: |
using Pkg
Pkg.add("MPIPreferences")
- name: use MPI system binary
shell: julia --color=yes --project=. {0}
run: |
using MPIPreferences
MPIPreferences.use_system_binary()
- run: julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build(); Pkg.precompile()'
- run: julia -O1 --project=. --color=yes --check-bounds=yes test/mpi/runtests.jl
- uses: julia-actions/julia-processcoverage@v1
- uses: codecov/codecov-action@v1
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
with:
file: lcov.info