Add coauthors

[dhimmel]

Currently, the author section looks like:

While the manuscript is still not complete, I think it makes sense to begin adding all coauthors.

@cgreene and I last discussed authorship in June 2020. But from my notes, we had sketched out the following author ordering:

Himmelstein, Zietz, Rubinetti, Kloster, Heil, Hu, Nicholson, Hao, Sullivan, Nagle, Greene

A few notes:

• this order is of course preliminary as the manuscript is not complete
• we will reorder authors as warranted by additional contributions
• let us know if we could be forgetting someone
• from the greenelab onboarding

  Our lab follows the Perelman School of Medicine Authorship Policy. These guidelines are derived from ICMJE's Uniform Requirements for Manuscripts Submitted to Biomedical Journals."

• we feel everyone listed above meets the criteria for authorship. But if for any reason someone would not like to be a coauthor, let us know either here or privately.
• we'll notify everyone when the manuscript is complete, by commenting on this issue or elsewhere, before making the initial release (e.g. preprint or journal submission).

In the next comment, I will tag people and provide instructions for adding yourself as a coauthor.

[dhimmel]

To add your authorship information, go to https://github.com/greenelab/connectivity-search-manuscript/edit/main/content/metadata.yaml and add the following (replacing my information with your information):

  - github: dhimmel
    name: Daniel S. Himmelstein
    initials: DSH
    orcid: 0000-0002-3012-7446
    twitter: dhimmel
    email: [email protected]
    affiliations:
      - Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America
      - Related Sciences
    funders: GBMF4552

If you don't have a specific piece of metadata, delete it (for example delete twitter line if you don't want to display a twitter account). For funders, put only funders that supported your work on this study.

Then make a pull request on GitHub.

[dhimmel]

Tagging @zietzm and @cgreene first to add their authorships. Not tagging everyone at once to avoid git conflicts. But if you see this feel free to add your information at any time via pull request.

[dhimmel]

Tagging the next batch of authors: @vincerubinetti @kkloste @ben-heil @dongbohu @danich1 @yhao-compbio.

[dhimmel]

@kkloste @ben-heil @dongbohu @yhao-compbio, did you want to submit a PR to add your author details to content/metadata.yaml according to the author order mentioned above:

Himmelstein, Zietz, Rubinetti, Kloster, Heil, Hu, Nicholson, Hao, Sullivan, Nagle, Greene

[dongbohu]

@dhimmel Sorry I added my authorship information to main by accident. I can revert it and create a PR if you want.

[dhimmel]

Sorry I added my authorship information to main by accident

Got it, thanks. We can keep 2b090c4.

[dhimmel]

Tagging @kkloste @yhao-compbio @naglem @bdsullivan

[dhimmel]

All non bolded authors have added their metadata:

Himmelstein, Zietz, Rubinetti, Kloster, Heil, Hu, Nicholson, Hao, Sullivan, Nagle, Greene

[dhimmel]

Faisal Alquaddoomi (@falquaddoomi) has recently been super helpful keeping our computational instances healthy, e.g. hetio/hetionet#48, so we'd like to include Faisal as a coauthor. New order with missing in bold:

Himmelstein, Zietz, Rubinetti, Kloster, Heil, Alquaddoomi, Hu, Nicholson, Hao, Sullivan, Nagle, Greene

@falquaddoomi if that sounds good to you, please open a PR to edit metadata.yaml.

[falquaddoomi]

@dhimmel Ah, thanks! I'll put up a PR to update metadata.yaml with my info ASAP.