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Chewbacca temp folder not getting removed #92

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ryanjameskennedy opened this issue Apr 6, 2023 · 0 comments · Fixed by #66
Closed

Chewbacca temp folder not getting removed #92

ryanjameskennedy opened this issue Apr 6, 2023 · 0 comments · Fixed by #66
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When submitting multiple samples in parallel using an HPC, the following issue regarding temp folders arises as parallel processes compete for the same databases at the same time. Furthermore, the chewbacca singularity image needs to be updated to contain v3.1.0 from v2.8.5.
@ryanjameskennedy ryanjameskennedy self-assigned this Apr 6, 2023
@ryanjameskennedy ryanjameskennedy linked a pull request Apr 6, 2023 that will close this issue
Update chewBBACA and batch list submission for HPC issue #66
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Update chewBBACA and batch list submission for HPC issue genomic-medicine-sweden/jasen
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